pCRM1exportome

NES candidate motifs (experimentally validated)

The list of candidate NES motifs experimentally validated and reported in NESdb and validNES databases.

Each segment was scored via the STAR-system, i.e., how many criteria can be passed: i) not located in the ordered region, ii) do not have beta strand in the middle, iii) good or medium Ebind scores, and iv) the hydrophobic positions in NES consensus overlap with the cancer-related mutations. The following lists are for the predicted as highly plausible and cancer-related NES motifs with five STAR scores.

By cliking the name of the protein, you can retrieve each plot.

sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES). The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0)
Cosmic: if the key hydrophobic positions are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; in cases where the hydrophobic residue is mutated to a conservative Leu, Ile, Val, Met, or Phe, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"; when the C-terminal spacer residues are mutated Pro, flagged with "cosmic_spacer_Pro"

FILTER

list

*list

name	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	cosmic	TOTALscore(Ebind\|Stars)
Baculoviral IAP repeat-containing protein 2	Q13490	527	CLKEIDSTLYKNLFVDK	HHHHHHCHHHHHHHHCC	c1c-5	DISO	boundary\|CARD_BIRC2_BIRC3;	0.0	-35.185	cosmic_phi	Medium\|
Nuclear factor erythroid 2-related factor 2	Q16236	246	FLNAFEDSFSSILS ..............	HHHCCCCCCCCCCC	c3-4	DISO		0.0	-34.245	cosmic_phi	Medium\|
Double-stranded RNA-specific adenosine deaminase	P55265	122	GVDCLSSHFQELSIYQ ..............	CCCHHHHHHHCCCCCH	c1a-5	boundary	boundary\|z-alpha;	0.0	-39.821	cosmic_phi	Medium\|
Fanconi anemia group A protein	O15360	649	PLGQLTAALGELRA	HHHHHHHHHHHHHH	c3-4	boundary		0.0	-38.856	cosmic_phi	Medium\|
Fanconi anemia group A protein	O15360	1252	EREELLVFLFFFSLMG	CHHHHHHHHHHHHHHH	c1a-4	boundary		0.0	-32.566	cosmic_phi	Weak\|
COMM domain-containing protein 1	Q8N668	134	HSAQIHTPVAIIELEL +++++++++*	HHCCCCCCEEEEEEEE	c1a-4	boundary	middle\|Commd1_MURR1;	0.43	-35.367	cosmic_phi	Medium\|
DNA topoisomerase 2-alpha	P11388	1051	QARFILEKIDGKIIIEN +++++++++++	HHHHHHHHHCCCCEECC	c1c-4	boundary	middle\|PTZ00108; middle\|TOP4c;	0.0	-34.752	cosmic_phi	Medium\|
DNA topoisomerase 2-alpha	P11388	1052	ARFILEKIDGKIIIEN +++++++++++	HHHHHHHHCCCCEECC	c1aR-4	boundary	middle\|PTZ00108; middle\|TOP4c;	0.0	-35.053	cosmic_phi	Medium\|
MLX-interacting protein	Q9HAP2	122	IDASLTKLFECMTLAY ++++++++++++	CCCCHHHHHHHHCHHH	c1a-4	boundary		0.0	-41.76	cosmic_spacer_Pro	Strong\|
Beclin-1	Q14457	429	LKFMLTNLKWGLAWVS	HHHHHHHHHHHHHHHH	c1aR-5	boundary	boundary\|APG6;	0.0	-34.603	cosmic_phi	Medium\|
Zinc finger CCCH domain-containing protein 7B	Q9UGR2	151	SVTQLGQELAQKLGLRV	HHHHHHHHHHHHHCHHH	c1c-5	DISO	boundary\|DUF3856 superfamily;	0.0	-37.725	cosmic_phi	Medium\|
Zinc finger CCCH domain-containing protein 7B	Q9UGR2	277	FGPELDTLLDSLSLVQ ..............	CCHHHHHHHHHHHHCC	c1a-4	DISO		0.0	-30.475	cosmic_phi	Weak\|
Paxillin	P49023	337	MLGSLQSDLNKLGVAT	HHHHHHHHHHHCCHHH	c1a-5	boundary	boundary\|LIM1_Paxillin_like;	0.0	-38.072	cosmic_phi	Medium\|
Protein chibby homolog 1	Q9Y3M2	91	LRLKVDILLDMLSEST	HHHHHHHHHHHHHHHH	c1aR-4	DISO	boundary\|Chibby;	0.0	-30.805	cosmic_phi	Weak\|
Pericentrin	O95613	2030	LQSELLLVKNEMRLSL	HHHHHHHCHHHHCCCC	c1d-4	DISO		0.0	-31.175	cosmic_phi	Weak\|
Mothers against decapentaplegic homolog 4	Q13485	137	VSPGIDLSGLTLQS ++++++++	CCCCCCCCCCCCCC	c2-4	DISO	boundary\|MH1_SMAD_4;	0.0	-35.798	cosmic_phi	Medium\|
Dysbindin	Q96EV8	124	SFEEVENNLLHLED	HHHHHHHHHHHHHH	c3-4	boundary		0.0	-32.789	cosmic_spacer_Pro	Weak\|
Dysbindin	Q96EV8	233	VNVDMLEQMDLMDISD * *	ECHHHHHHHCCCCCCC	c1a-4	DISO	middle\|Dysbindin;	0.0	-46.069	cosmic_phi	Strong\|
MutS protein homolog 4	O15457	224	LFTLITENFKNVNFTT	HHHHHHHHCCCCEEEE	c1a-5	boundary	middle\|MutS;	0.0	-33.536	cosmic_phi	Medium\|
DNA mismatch repair protein Mlh1	P40692	579	PAPLFDLAMLALDS ++++++	CCCHHHHHHHHHCC	c2-4	boundary	middle\|Mlh1_C;	0.0	-36.906	cosmic_spacer_Pro	Medium\|
Kelch-like ECH-associated protein 1	Q14145	297	CKDYLVKIFEELTLHK ............	HHHHHHHHHHHHHCCC	c1a-4	boundary	middle\|PHA03098; boundary\|BACK_KLHL19_KEAP1;	0.0	-38.486	cosmic_phi	Medium\|
Catenin delta-1	O60716	656	YELLFQPEVVRIYISL	HHHHCCHHHHHHHHHH	c1a-4	boundary		0.0	-31.066	cosmic_phi	Weak\|
TAR DNA-binding protein 43	Q13148	244	CGEDLIIKGISVHI ***	HCCCEEECCEEEEE	c2-4	boundary	boundary\|RRM2_TDP43; boundary\|RRM;	0.57	-36.57	cosmic_phi	Medium\|
Huntingtin	P42858	307	STLLILGVLLTLRYLV	CHHHHHHHHHHHHHHH	c1aR-5	boundary		0.0	-36.831	cosmic_phi	Medium\|
Huntingtin	P42858	843	SELGLQLIIDVLTLRN	HHHHHHHHHHHHHHCC	c1a-4	boundary		0.0	-30.805	cosmic_phi	Weak\|
Huntingtin	P42858	845	LGLQLIIDVLTLRN	HHHHHHHHHHHHCC	c2-4	boundary		0.0	-31.191	cosmic_phi	Weak\|
Huntingtin	P42858	985	RGYNLLPSITDVTMEN	CCCCCCCCCCCHHHHH	c1a-4	DISO		0.0	-30.356	cosmic_spacer_Pro	Weak\|
Huntingtin	P42858	2692	TPAILISEVVRSLLVVS	CCHHHHHHHHHHHHHHH	c1c-4	boundary		0.0	-33.327	cosmic_spacer_Pro	Medium\|
Huntingtin	P42858	2693	PAILISEVVRSLLVVSD	CHHHHHHHHHHHHHHHH	c1c-4	boundary		0.0	-32.859	cosmic_spacer_Pro	Weak\|
Huntingtin	P42858	2693	PAILISEVVRSLLVVS	CHHHHHHHHHHHHHHH	c1a-4	boundary		0.0	-36.362	cosmic_spacer_Pro	Medium\|
Tropomodulin-1	P28289	124	SDAELCDIAAILGMHT +++++++**+	CHHHHHHHHHHHCCCH	c1d-4	DISO	boundary\|Tropomodulin;	0.0	-39.196	cosmic_spacer_Pro	Medium\|
Selenocysteine insertion sequence-binding protein 2	Q96T21	673	LVLGLREVLKHLKLKK	EEECHHHHHHHHHCCC	c1a-5	DISO	boundary\|Ribosomal_L7Ae; boundary\|Ribosomal_L7Ae superfamily;	0.0	-35.183	cosmic_phi	Medium\|
Protein PAT1 homolog 1	Q86TB9	648	PSVSITSLLRQLMNLPQ	CHHHHHHHHHHHHCCCC	c1c-4	boundary	boundary\|PAT1;	0.0	-32.815	cosmic_spacer_Pro	Weak\|
Serine/threonine-protein kinase PAK 4	O96013	541	VSPSLKGFLDRLLVRD ++++++++++	CCHHHHHHHHHHCCCC	c1a-4	boundary	middle\|STKc_PAK4; boundary\|S_TKc;	0.0	-32.558	cosmic_spacer_Pro	Weak\|
Inositol polyphosphate multikinase	Q8NFU5	402	GLKHLISVLRSILD	HHHHHHHHHHHHHH	c3-4	terminal	boundary\|IPK;	0.0	-31.945	cosmic_phi	Weak\|
Dual specificity protein kinase TTK	P33981	808	EMKYVLGQLVGLNS	HHHHHHHHHHCCCC	c3-4	DISO	boundary\|PKc_Mps1; boundary\|Pkinase;	0.0	-36.547	cosmic_phi	Medium\|
NF-kappa-B inhibitor alpha	P25963	93	VIRQVKGDLAFLNFQN	HHHHHHHCCCCCCCCC	c1a-5	boundary	middle\|Ank_2; boundary\|Ank_2;	0.0	-31.206	cosmic_phi	Weak\|
Interferon regulatory factor 3	Q14653	408	YKAYLQDLVEGMDFQG	HHHHHHHHHHHCCCCC	c1a-4	DISO	boundary\|IRF-3;	0.0	-31.883	cosmic_phi	Weak\|
Aryl hydrocarbon receptor	P35869	114	EGEFLLQALNGFVLVVT	HHHHHHHHCCCEEEEEE	c1c-4	boundary	boundary\|PAS; boundary\|PAS;	0.12	-33.841	cosmic_phi	Medium\|
Aryl hydrocarbon receptor	P35869	115	GEFLLQALNGFVLVVT	HHHHHHHCCCEEEEEE	c1aR-5	boundary	boundary\|PAS; boundary\|PAS;	0.14	-30.569	cosmic_phi	Weak\|
Transcription factor E2F1	Q01094	202	RLEGLTQDLRQLQE	HHHHHHHHHHHHHH	c3-4	boundary	boundary\|E2F_TDP; boundary\|E2F_DD;	0.0	-32.276	cosmic_phi	Weak\|
Cellular tumor antigen p53	P04637	336	ERFEMFRELNEALELKD ++++++++++++	HHHHHHHHHHHHHHHHH	c1c-4	boundary	small\|P53_tetramer;	0.0	-30.193	cosmic_phi	Weak\|
Forkhead box protein O3	O43524	546	GSRALSNSVSNMGLSE	CCCCCCCCCCCCCCCC	c1a-4	DISO		0.0	-34.707	cosmic_phi	Medium\|
Serine/threonine-protein kinase mTOR	P42345	1099	AIQLFGANLDDYLHLLL	HHHHHHHCHHHHHHHHH	c1c-5	boundary	middle\|TEL1;	0.0	-35.562	cosmic_phi	Medium\|
Serine/threonine-protein kinase mTOR	P42345	2008	QAMMVSEELIRVAILW	HHHHHHHHHHHHHHHH	c1a-4	boundary	middle\|TEL1; boundary\|FRB_dom;	0.0	-32.351	cosmic_spacer_Pro	Weak\|
Protein Tob1	P50616	9	LNFIISYLYNKLPRRR ++++++	HHHHHHHHHHCCCHHH	c1aR-4	terminal	boundary\|btg1;	0.0	-30.129	cosmic_phi	Weak\|
Hypoxia-inducible factor 1-alpha	Q16665	58	SVMRLTISYLRVRK	HHHHHHHHHHHHHH	c2-5	DISO	boundary\|HLH;	0.0	-31.338	cosmic_spacer_Pro	Weak\|
Hypoxia-inducible factor 1-alpha	Q16665	89	NCFYLKALDGFVMVLT	HHHHHHHCCCEEEEEE	c1aR-5	boundary	boundary\|HLH; boundary\|PAS;	0.14	-36.084	cosmic_phi	Medium\|
Hypoxia-inducible factor 1-alpha	Q16665	92	YLKALDGFVMVLTD	HHHHCCCEEEEEEC	c3-4	boundary	boundary\|HLH; boundary\|PAS;	0.43	-31.005	cosmic_phi	Weak\|
Estrogen receptor	P03372	530	CKNVVPLYDLLLEM	HCCCCCHHHHHHHH	c2-4	boundary	boundary\|NR_LBD_ER;	0.0	-37.509	cosmic_phi	Medium\|
Separin	Q14674	562	KELQLKTLRDSLSGWD	CCCCHHHHHHHHCCCC	c1aR-4	boundary		0.0	-33.999	cosmic_phi	Medium\|
Mucosa-associated lymphoid tissue lymphoma translocation protein 1	Q9UDY8	438	NCLCVQNILKLMQEKE	HCEEHHHHHHHHHHCC	c1aR-4	boundary	middle\|Peptidase_C14;	0.0	-30.512	cosmic_spacer_Pro	Weak\|
Mucosa-associated lymphoid tissue lymphoma translocation protein 1	Q9UDY8	473	TIPILDALKVTA +++++++	CCCHHHCCCCCC	c2-rev	boundary	middle\|Peptidase_C14;	0.0	-36.347	cosmic_phi	Medium\|
Ankyrin repeat domain-containing protein 54	Q6NXT1	257	QRERLDDLCTRLQMTS	HHHHHHCCCCHHHHHC	c1d-4	boundary		0.0	-32.022	cosmic_phi	Weak\|
Ubiquitin carboxyl-terminal hydrolase 21	Q9UK80	131	GTGELGAALSRLALRP +++++++++++++	CCCCCCCCCCHHCCCC	c1a-4	DISO		0.0	-36.843	cosmic_phi	Medium\|