T0437

Human/Server Targets
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T0437

protein yiiS from Shigella flexneri

Target type: Human/Server

Target sequence:

>T0437 SfR90 , Shigella flexneri, 99 residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA

Structure:
Method: NMR
Determined by: NESG
PDB ID: 2k3i

jumping through 437 NMR models
Jumping through 20 NMR models of 2k3i

all 20 437 NMR models
All 20 superimposed NMR models of 2k3i

PyMOL of 2k3i

Domains:  PyMOL of domains

Single domain protein with poorly structured termini. Structurally variable regions were removed from NMR models for evaluation of predictions.

Structure classification:

DCoH-like protein with disordered N-terminal β-strand. Can be considered a circular permutation of ferredoxin-like fold.

2k3i_1:22-102 cartoon
Cartoon diagram of 437:
2k3i model 1 residues 22-102

CASP category:

Comparative modeling:medium. Deviations from the template in the loops were hard to model.

Closest templates:

Protein VPA0419 from Vibrio parahaemolyticus: 2jz5 

Conservation:                                                                           5       5 6 5    6                         7                            5 9 579  8766               
T0437                           -----------------------------------------MKDVVDKCSTKG--------CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA---------     
gi_168177035_pdb_2JZ5_A_C    1  --------------------------------------------------------------AGEIGFIIKEGDEVADVTIFAETKDALESELAKYIELAKSVCA--GVEYNVSELTE--ESKELTARFKFEVSAEKLIFELKTRSLARLEHHHHHH   91
gi_145638689_ref_ZP_01794    1  --------------------------------------------MTVKCKAEESLTC----SCVDVGTIIDGSDCTVEVHQFYSTEADANAALERLTKKARDIES--DPCEIKSEIVAVENGVQLNASFTFSCQAEAMIFELANR------------   95
gi_113461683_ref_YP_71975    1  -----------------------------------------MSENVLKCTPEETKAC----CCADVGTIIDNSELSVDFSQVYENETTAQEALAYLTEKARKAET--ESCDIRSEIKEVNGNYQLNATFTFSCQAETLIFQLSIR------------   98
gi_157144720_ref_YP_00145    1  ---------------------------------------------------------------MDVGTIMDNSDCTASYSRVFENRAQAEETLAALTEKARGVES--EPCQITSTFTEEAEGVRLDIDFVFACEAETLIFQLGLR------------   80
gi_161612871_ref_YP_00158    1  ---------------------------------------------MSKCSADETPVC----CCMDVGTIMDNSDCTASYSRVFATRAEAEGTLAALTEKARSVES--EPCQITPTFTEESEGVRLDIDFVFACEAETLIFQLGLR------------   94
gi_62180962_ref_YP_217379    1  -------------------------------------MQIQRKSTMSKCSADETPVC----CCMDVGTIMDNSDCTASYSRVFATRAEAEETLAALTEKARSVES--EPCQITPTFTEESEGVRLDIDFVFACEAETLIFQLGLR------------  102
gi_89109163_ref_AP_002943    1  ---------------------------------------------MSKCSADETPVC----CCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVES--EPCKITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR------------   94
gi_146312525_ref_YP_00117    1  ---------------------------------------------MSKCSADETPVC----CCMDVGTIMDNTDCTASYSRVFSKRADAEETLSALTKRARDVES--DPCEIKSTLTEVEGGVKLDIDFIFACEAETLIFQLGLR------------   94
gi_167856152_ref_ZP_02478    1  ------------------------------------------------MSECNSSSC----CSIDVGTIIDNSDCAVNFTQLYTTKEEAEDALAFLTSKARSTES--ERCEITSEIISTENGFQLTACFKFSYQVESMIFELGMR------------   91
gi_153095118_gb_EDN75665.    1  ------------------------------------------MSKTMQQKAAEAHNM----CRLKGDSMLDNADRQIAFEAVYESEELAQQAVEFFAQKAKSVET--EPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR------------   97
gi_113460922_ref_YP_71898    1  -----------------------------------------MSDKTLQQKVAEAHNM----CRIKGDSMLDNSAREVVFEAEYDTEKQALNARDYFIQKARDIEN--DPANIESQITDISNGFRLKMRIVFGCQAEVVLFQMAIR------------   98
gi_46143287_ref_ZP_002044    1  ------------------------------------------MHKTMQQKAAEAHNM----CKLKGDSMLDNSDRQIAFEAVYDSEEQAQQAVEFFTEKAKSVET--EACVIQHSISPIEDGFLMQMRIEFSCQAEVVLFQMAVR------------   97
gi_145638002_ref_ZP_01793    1  -------------------------------------------MAIQTEKPIECVGC----NTFDMKSLFDNRDCSQVIEYVYDSEEQAQEALAFFTQKARDVES--EPCEIQSEITKVDDGYLLKADFTFCCQAELVIFQMRIA------------   96
gi_42630898_ref_ZP_001564    1  -----------------------------------------------------------------MKSLFDNRDCSQVIEYIYDSEEQAQEALAFFTQKARDVES--EPCEIQSEITKVDDGYLLKADFTFCCQAELVIFQMRIA------------   78
gi_153092804_gb_EDN73841.    1  ---------------------------------------------MKNDKPIECEGC----NTFDVGSILDNSETVATIQRTYESENEAKAALEKFTQKARDVES--EPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF-----------   95
gi_91793475_ref_YP_563126    1  ------------------------MEANAKTIQSNVTQSKGIKSLVVGEN--IDATRDCCGGFVDIGKLIEANDTLLVVHFNGHN---SKAGATRLQLKAEQKFK-----NVTASMKV--MDDGVILSLNFEYTVEKLIFQLEEGL-----------  110
gi_114563053_ref_YP_75056    1  -----------------------------------------MIKQIKQQQGNVSDSCTECGSYVDIGAVVEAEDTILQLSFVGDD---ALLQAQSMQQVAQERFP-----DTKADIID--EDSAISLKLDFAFSVEKMIFQLENQL-----------   95
gi_120598960_ref_YP_96353    1  -------------------------MSWNGIVITPNSEEDKMKGIIAAQSPTVNDTCTDCGSFVDIGAVIDEHDIVLEIQFTGAS---AKDDAENMAERAKARFG-----KTQAKFVT--VETGMSLQLVFDVSAEKMIFQLENGL-----------  111
gi_24374043_ref_NP_718086    1  -----------------------------------------MKGIIAGQTPTVNDTCTDCGSFVDIGAVIDEQDTALEMQFTGAE---AKNEAAKMVERAQTRFR-----HTQASVAP--GETGVTLKLVFDVSVEKMIFQLENGL-----------   95
gi_163752027_ref_ZP_02159    1  -----------------------------MLNYVYLREKCSMKNIQNAQSRLVNDTCNDCGSYADIGAVIDEHDRQLVVNFSGAE---AQSESELLRDKVQARFD-----NVSVELIS--VESGISLTIDFAFSAEKMIFQLENSI-----------  107
gi_127512986_ref_YP_00109    1  -----------------------------------------MKKIQEGQSELVNDTCNDCGSYADIGAVIDEFDTVLTLVREGDK---AQSELQALAEAAKQRFE-----GVESDIKA--VEGALELRLTFGYSAEKMIFQLEHGL-----------   95
gi_90409522_ref_ZP_012175    1  --------------------------------------------MSENKNAETTDVCEACGSFVELGSVINADDTVFVLPFKGSSLDGVNKMAKKYIDAAKKRFE---SVIISTEETQKEEIFHIEVTFTFECTAEKLIFEMGLSAI----------  100
gi_119944642_ref_YP_94232    1  --------------------------------------------MSQDKNAD--DICEACGSFVELGSVISDDDTVLVLPFTGKESVAVTALAIKYIDAAKTRFD---SVVVTEQEITADDLVTLEVTFNFDCTAEKLIFEMGLSAI----------   98
gi_149911280_ref_ZP_01899    1  -----------------------------------------------MSNDNNTDIKDCCGAFAEIGSIIHPDDTELSFPISFDSQLAVDEKRSELEAYVEEQFD---EAVTINFTAQ--DEHTYLVTLSFTCTAEKMIFEMNLRHLLA--------   97
gi_28900274_ref_NP_799929    1  ----------------------------------------------MSVELEESQVCEACGCAGEIGFIIKEGDEVADVTIFAETKDALESELAKYIELAKSVCA--GVEYNVSELTE--ESKELTARFKFEVSAEKLIFELKTRSLAR--------   99
gi_168177035_pdb_2JZ5_A_C    1  --------------------------------------------------------------AGEIGFIIKEGDEVADVTIFAETKDALESELAKYIELAKSVCA--GVEYNVSELTE--ESKELTARFKFEVSAEKLIFELKTRSLARLEHHHHHH   91
gi_163800270_ref_ZP_02194    1  ----------------------------------------------MSTELEQNQVCETCGCAGEMGFIIKEGDDVADVTIFAETKAVLETELAKYIEMATAVCP--AVEYNVSELTE--ESRELTARFKFEVSAEKLIFELKTRSLAR--------   99
gi_15601673_ref_NP_233304    1  ---------------------------------------------MSNQTCVENEVCEACGCAGEIGFIIREGDDVAEVSLFGSDKAHLEGKLAEYISLAKQVYA--NVEYEVAPVAD--NATELHARFKFEVSAEKLIFELKTRALAR--------  100
gi_149191423_ref_ZP_01869    1  ----------------------------------------------MSNTYEEPTVCDACGVAGEMGFIIKEGDDVAEVQLFSDSKAQLEVELQKYVELAQAVCK--NVEFEVSPLEE--SSKELTARFKFEVSAEKLIFELKTRSLAR--------   99
gi_117619731_ref_YP_85489    1  --------------------------------------------MSVEEKVELNETCDSCGCFAEIGTIIGEGDDVMELVIEAAAEADARAKLAAYEALAKQVTA---EATSSSELSQGANGVILKARLQFTCTAEKLIFEMRARSI----------  100
Consensus_aa:                   .................................................ps..s.sC....thh-lGsllcp.Ds.h.hp...ssp..hp..h..h.pbAp...s..ps..h.sph...ps...lphphpFshpAE.hIFpl...............
Consensus_ss:                                                                                 eeeeeeee     eeeeeeee  hhhhhhhhhhhhhhhhhh       eeeeeeee    eeeeeeeeeeeehhhhhhhhhh            

Target sequence - PDB file inconsistencies:

NMR structure contains C-terminal His-tag 102-LEHHHHHH-109, which is mostly disordered, and 2 extra N-terminal residues 1-MA-2, which cause a 2-residue discrepancy in PDB vs. target sequence numbering.

T0437    2k3i.pdb    T0437.pdb    PyMOL    PyMOL of domains    

T0437    1 --MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA-------- 99
           ~~*******************||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~~~~~
2k3iA    1 MAMKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLALEHHHHHH 109

Residue change log: remove 1-MA-2, 102-LEHHHHHH-109 as it is not present in target sequence; remove 3-MKDVVDKCSTKGCAIDIGT-21 by 3.5Å SD cutoff;

Single domain protein: target 20-99 ; pdb 22-101

Sequence classification:

Protein of unknown function DUF406 in Pfam.

Server predictions:

T0437:pdb 22-101:seq 20-99:CM_medium;   alignment

distribution of first scores
First models for T0437: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

click on a score in the table below to display the model in PyMOL

# GROUP ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ ↓ GROUP #
T0437 T0437 T0437 T0437
First score First Z-score Best score Best Z-score
1 Bates_BMM 83.44 82.19 83.58 1.18 1.97 1.68 84.06 82.29 83.58 1.38 1.98 1.91 Bates_BMM 1
2 GeneSilico 83.44 77.40 84.71 1.18 1.52 1.81 83.44 78.02 84.71 1.29 1.51 2.08 GeneSilico 2
3 MULTICOM 82.50 74.58 81.69 1.08 1.25 1.47 82.50 74.58 81.69 1.17 1.13 1.64 MULTICOM 3
4 Zhang 81.88 74.58 80.99 1.02 1.25 1.39 82.50 74.79 81.56 1.17 1.16 1.62 Zhang 4
5 SAM−T08−human 80.94 74.06 77.96 0.93 1.20 1.05 80.94 74.06 77.96 0.97 1.08 1.10 SAM−T08−human 5
6 DBAKER 80.94 72.40 84.96 0.93 1.05 1.84 86.25 81.04 85.49 1.66 1.84 2.19 DBAKER 6
7 fais@hgc 80.62 75.42 79.21 0.89 1.33 1.19 80.62 75.42 79.21 0.92 1.22 1.28 fais@hgc 7
8 FrankensteinLong 80.31 71.56 78.78 0.86 0.97 1.14 80.31 71.56 78.78 0.88 0.80 1.22 FrankensteinLong 8
9 Zhang−Server 80.31 69.27 80.08 0.86 0.76 1.29 83.75 81.25 82.07 1.34 1.87 1.69 Zhang−Server 9
10 fams−ace2 80.00 73.12 79.55 0.83 1.12 1.23 80.00 73.12 79.55 0.84 0.97 1.33 fams−ace2 10
11 mufold 80.00 70.00 79.68 0.83 0.82 1.24 84.06 81.15 83.34 1.38 1.85 1.88 mufold 11
12 Jiang_Zhu 79.38 70.62 74.13 0.77 0.88 0.61 79.38 70.62 74.13 0.76 0.70 0.54 Jiang_Zhu 12
13 fleil 78.75 62.71 71.64 0.71 0.14 0.33 78.75 67.29 71.64 0.68 0.33 0.18 fleil 13
14 Zico 78.12 65.83 72.45 0.64 0.43 0.42 78.12 65.83 74.09 0.59 0.17 0.53 Zico 14
15 ZicoFullSTP 78.12 65.83 72.45 0.64 0.43 0.42 78.12 69.17 74.09 0.59 0.54 0.53 ZicoFullSTP 15
16 ZicoFullSTPFullData 78.12 65.83 72.45 0.64 0.43 0.42 78.12 65.83 74.09 0.59 0.17 0.53 ZicoFullSTPFullData 16
17 MULTICOM−RANK 78.12 63.12 71.17 0.64 0.18 0.27 78.12 64.69 71.17 0.59 0.05 0.11 MULTICOM−RANK 17
18 Hao_Kihara 77.81 71.15 71.85 0.61 0.93 0.35 77.81 71.15 71.85 0.55 0.76 0.21 Hao_Kihara 18
19 ABIpro 77.81 68.23 70.90 0.61 0.66 0.24 77.81 68.23 71.65 0.55 0.43 0.18 ABIpro 19
20 nFOLD3 77.50 66.88 71.66 0.58 0.53 0.33 77.50 66.88 71.66 0.51 0.29 0.18 nFOLD3 20
21 PS2−server 77.50 64.17 71.21 0.58 0.28 0.28 77.50 64.17 71.21 0.51 -0.01 0.11 PS2−server 21
22 PS2−manual 77.50 64.17 71.88 0.58 0.28 0.35 77.50 64.17 71.88 0.51 -0.01 0.21 PS2−manual 22
23 3Dpro 77.19 67.81 70.94 0.55 0.62 0.25 77.19 71.67 72.75 0.47 0.81 0.34 3Dpro 23
24 COMA−M 77.19 66.56 72.18 0.55 0.50 0.39 77.19 66.56 72.18 0.47 0.25 0.26 COMA−M 24
25 COMA 77.19 66.56 72.18 0.55 0.50 0.39 77.19 66.56 72.18 0.47 0.25 0.26 COMA 25
26 Elofsson 77.19 64.48 72.91 0.55 0.31 0.47 77.19 68.23 73.32 0.47 0.43 0.42 Elofsson 26
27 FFASsuboptimal 76.88 72.50 72.62 0.52 1.06 0.44 77.19 72.81 72.62 0.47 0.94 0.32 FFASsuboptimal 27
28 TASSER 76.88 67.50 73.05 0.52 0.59 0.49 77.19 67.50 73.05 0.47 0.35 0.38 TASSER 28
29 fais−server 76.88 61.46 69.79 0.52 0.02 0.12 77.19 62.40 72.32 0.47 -0.21 0.28 fais−server 29
30 RAPTOR 76.88 61.04 72.84 0.52 -0.02 0.46 76.88 71.46 72.84 0.43 0.79 0.35 RAPTOR 30
31 CBSU 76.88 60.83 70.79 0.52 -0.04 0.23 77.50 67.08 71.91 0.51 0.31 0.22 CBSU 31
32 Pcons_dot_net 76.56 73.23 72.73 0.49 1.13 0.45 76.56 73.23 72.73 0.39 0.98 0.34 Pcons_dot_net 32
33 Pcons_multi 76.56 73.23 72.73 0.49 1.13 0.45 76.56 73.23 72.73 0.39 0.98 0.34 Pcons_multi 33
34 FFASstandard 76.56 72.81 72.33 0.49 1.09 0.41 77.19 72.81 72.35 0.47 0.94 0.28 FFASstandard 34
35 GS−MetaServer2 76.56 72.81 72.24 0.49 1.09 0.40 76.56 72.81 72.24 0.39 0.94 0.26 GS−MetaServer2 35
36 PSI 76.56 72.81 72.33 0.49 1.09 0.41 76.56 72.81 72.33 0.39 0.94 0.28 PSI 36
37 FFASflextemplate 76.56 72.81 72.33 0.49 1.09 0.41 77.19 72.81 72.35 0.47 0.94 0.28 FFASflextemplate 37
38 HHpred4 76.56 72.40 72.22 0.49 1.05 0.39 76.56 72.40 72.22 0.39 0.89 0.26 HHpred4 38
39 HHpred2 76.56 72.40 72.22 0.49 1.05 0.39 76.56 72.40 72.22 0.39 0.89 0.26 HHpred2 39
40 HHpred5 76.56 72.40 72.22 0.49 1.05 0.39 76.56 72.40 72.22 0.39 0.89 0.26 HHpred5 40
41 YASARA 76.56 67.19 69.94 0.49 0.56 0.13 76.56 67.19 69.94 0.39 0.32 -0.07 YASARA 41
42 3DShotMQ 76.56 63.65 70.65 0.49 0.23 0.22 76.56 63.65 70.65 0.39 -0.07 0.03 3DShotMQ 42
43 circle 76.56 63.44 71.58 0.49 0.21 0.32 77.19 65.31 71.60 0.47 0.11 0.17 circle 43
44 McGuffin 76.56 63.44 72.27 0.49 0.21 0.40 78.12 67.81 72.27 0.59 0.39 0.27 McGuffin 44
45 FAMSD 76.56 63.23 71.85 0.49 0.19 0.35 77.50 67.08 71.85 0.51 0.31 0.21 FAMSD 45
46 3D−JIGSAW_V3 76.56 61.35 71.83 0.49 0.01 0.35 77.50 68.54 72.36 0.51 0.47 0.28 3D−JIGSAW_V3 46
47 FOLDpro 76.25 71.67 72.75 0.46 0.98 0.45 76.25 71.67 72.75 0.35 0.81 0.34 FOLDpro 47
48 CpHModels 76.25 61.25 73.29 0.46 0.00 0.52 76.25 61.25 73.29 0.35 -0.33 0.42 CpHModels 48
49 pro−sp3−TASSER 75.94 66.56 70.77 0.42 0.50 0.23 79.69 67.19 72.43 0.80 0.32 0.29 pro−sp3−TASSER 49
50 FAMS−multi 75.94 65.31 71.26 0.42 0.38 0.28 76.25 65.31 71.26 0.35 0.11 0.12 FAMS−multi 50
51 BAKER−ROBETTA 75.94 60.52 66.94 0.42 -0.07 -0.21 76.25 64.90 69.72 0.35 0.07 -0.10 BAKER−ROBETTA 51
52 MULTICOM−CLUSTER 75.94 58.02 70.10 0.42 -0.30 0.15 77.19 66.98 71.09 0.47 0.30 0.10 MULTICOM−CLUSTER 52
53 MidwayFolding 75.62 71.67 73.15 0.39 0.98 0.50 75.62 72.08 73.15 0.26 0.86 0.40 MidwayFolding 53
54 panther_server 75.62 71.46 71.50 0.39 0.96 0.31 75.62 71.46 71.50 0.26 0.79 0.16 panther_server 54
55 FEIG 75.62 65.21 70.97 0.39 0.37 0.25 75.62 65.21 70.97 0.26 0.10 0.08 FEIG 55
56 LEE 75.62 63.96 70.09 0.39 0.26 0.15 75.62 63.96 70.48 0.26 -0.04 0.01 LEE 56
57 pipe_int 75.62 63.54 68.96 0.39 0.22 0.02 75.62 63.54 68.96 0.26 -0.08 -0.21 pipe_int 57
58 PRI−Yang−KiharA 75.62 62.71 71.81 0.39 0.14 0.35 75.62 62.71 71.81 0.26 -0.17 0.20 PRI−Yang−KiharA 58
59 SAMUDRALA 75.62 61.46 69.86 0.39 0.02 0.13 75.62 70.21 69.97 0.26 0.65 -0.07 SAMUDRALA 59
60 tripos_08 75.31 64.48 70.79 0.36 0.31 0.23 75.31 65.31 70.79 0.22 0.11 0.05 tripos_08 60
61 Abagyan 75.31 63.85 68.53 0.36 0.25 -0.03 75.31 65.21 68.53 0.22 0.10 -0.28 Abagyan 61
62 FALCON 75.31 63.85 69.61 0.36 0.25 0.10 75.62 63.85 70.78 0.26 -0.05 0.05 FALCON 62
63 FUGUE_KM 75.00 68.12 69.95 0.33 0.65 0.14 75.00 68.12 69.95 0.18 0.42 -0.07 FUGUE_KM 63
64 Distill 75.00 67.71 71.32 0.33 0.61 0.29 76.88 70.00 71.32 0.43 0.63 0.13 Distill 64
65 3DShot1 75.00 65.42 70.73 0.33 0.39 0.22 75.00 65.42 70.73 0.18 0.13 0.05 3DShot1 65
66 MUProt 75.00 65.00 69.84 0.33 0.35 0.12 77.19 67.40 70.73 0.47 0.34 0.05 MUProt 66
67 GS−KudlatyPred 75.00 62.08 68.70 0.33 0.08 -0.01 75.00 62.08 68.70 0.18 -0.24 -0.25 GS−KudlatyPred 67
68 LevittGroup 75.00 61.04 71.93 0.33 -0.02 0.36 75.62 61.04 72.17 0.26 -0.36 0.25 LevittGroup 68
69 Phyre_de_novo 75.00 57.92 68.35 0.33 -0.31 -0.05 75.00 57.92 68.35 0.18 -0.70 -0.30 Phyre_de_novo 69
70 SAM−T08−server 74.69 67.40 70.64 0.30 0.58 0.21 76.25 67.40 71.01 0.35 0.34 0.09 SAM−T08−server 70
71 MULTICOM−REFINE 74.69 64.48 69.74 0.30 0.31 0.11 74.69 64.48 69.74 0.14 0.02 -0.10 MULTICOM−REFINE 71
72 Poing 74.69 58.02 67.90 0.30 -0.30 -0.10 74.69 58.02 67.90 0.14 -0.69 -0.37 Poing 72
73 Phyre2 74.69 58.02 67.90 0.30 -0.30 -0.10 74.69 58.02 67.90 0.14 -0.69 -0.37 Phyre2 73
74 Phragment 74.69 58.02 67.90 0.30 -0.30 -0.10 74.69 58.02 67.90 0.14 -0.69 -0.37 Phragment 74
75 MULTICOM−CMFR 74.38 64.58 69.64 0.27 0.31 0.10 75.31 64.58 70.26 0.22 0.03 -0.02 MULTICOM−CMFR 75
76 GeneSilicoMetaServer 74.38 63.54 71.98 0.27 0.22 0.37 76.56 72.81 72.24 0.39 0.94 0.26 GeneSilicoMetaServer 76
77 Jones−UCL 74.38 62.92 65.59 0.27 0.16 -0.36 75.94 62.92 67.45 0.31 -0.15 -0.43 Jones−UCL 77
78 IBT_LT 74.06 61.77 69.38 0.24 0.05 0.07 74.06 61.77 69.38 0.06 -0.28 -0.15 IBT_LT 78
79 BioSerf 74.06 58.23 69.40 0.24 -0.28 0.07 74.06 58.23 69.40 0.06 -0.66 -0.15 BioSerf 79
80 EB_AMU_Physics 73.75 63.75 65.69 0.21 0.24 -0.35 73.75 64.27 65.69 0.02 -0.00 -0.69 EB_AMU_Physics 80
81 MUSTER 73.75 62.29 69.84 0.21 0.10 0.12 73.75 62.29 69.84 0.02 -0.22 -0.08 MUSTER 81
82 AMU−Biology 73.75 55.00 75.68 0.21 -0.58 0.79 73.75 55.00 75.68 0.02 -1.02 0.77 AMU−Biology 82
83 Chicken_George 73.44 53.23 69.93 0.17 -0.75 0.13 75.62 64.17 71.92 0.26 -0.01 0.22 Chicken_George 83
84 ShakAbInitio 73.12 65.42 77.24 0.14 0.39 0.96 73.12 65.42 77.24 -0.06 0.13 0.99 ShakAbInitio 84
85 Softberry 73.12 62.71 65.39 0.14 0.14 -0.38 73.12 62.71 65.39 -0.06 -0.17 -0.73 Softberry 85
86 StruPPi 73.12 62.50 70.24 0.14 0.12 0.17 74.69 67.81 70.24 0.14 0.39 -0.03 StruPPi 86
87 JIVE08 72.50 65.42 62.83 0.08 0.39 -0.67 72.50 65.42 62.83 -0.15 0.13 -1.10 JIVE08 87
88 Pushchino 72.50 62.71 62.62 0.08 0.14 -0.70 72.50 62.71 62.62 -0.15 -0.17 -1.13 Pushchino 88
89 TJ_Jiang 72.50 61.46 69.43 0.08 0.02 0.08 72.50 63.23 69.43 -0.15 -0.12 -0.14 TJ_Jiang 89
90 A−TASSER 72.19 61.15 68.04 0.05 -0.01 -0.08 75.62 67.50 68.74 0.26 0.35 -0.24 A−TASSER 90
91 ProtAnG 72.19 54.38 69.25 0.05 -0.64 0.06 72.19 54.38 69.25 -0.19 -1.09 -0.17 ProtAnG 91
92 POEM 71.88 61.67 69.85 0.02 0.04 0.12 74.38 67.29 79.18 0.10 0.33 1.27 POEM 92
93 METATASSER 71.88 59.58 61.45 0.02 -0.15 -0.83 74.69 69.17 68.62 0.14 0.54 -0.26 METATASSER 93
94 Sternberg 71.88 58.54 61.83 0.02 -0.25 -0.79 71.88 58.54 61.83 -0.23 -0.63 -1.25 Sternberg 94
95 mGenTHREADER 71.56 69.27 66.80 -0.01 0.76 -0.22 71.56 69.27 66.80 -0.27 0.55 -0.53 mGenTHREADER 95
96 SAM−T02−server 71.56 69.27 66.80 -0.01 0.76 -0.22 71.56 69.27 66.80 -0.27 0.55 -0.53 SAM−T02−server 96
97 Ozkan−Shell 70.62 63.96 79.05 -0.11 0.26 1.17 77.50 72.50 83.48 0.51 0.90 1.90 Ozkan−Shell 97
98 rehtnap 69.69 63.85 62.66 -0.20 0.25 -0.69 69.69 65.10 62.66 -0.52 0.09 -1.13 rehtnap 98
99 SAM−T06−server 66.88 55.21 66.45 -0.48 -0.56 -0.26 71.56 69.27 66.80 -0.27 0.55 -0.53 SAM−T06−server 99
100 SMEG−CCP 66.56 54.27 70.36 -0.51 -0.65 0.18 66.56 54.27 70.36 -0.93 -1.10 -0.01 SMEG−CCP 100
101 xianmingpan 66.25 53.33 65.28 -0.55 -0.74 -0.39 66.25 53.33 65.28 -0.97 -1.20 -0.75 xianmingpan 101
102 POEMQA 65.00 51.88 78.70 -0.67 -0.88 1.13 65.31 51.88 79.18 -1.09 -1.36 1.27 POEMQA 102
103 keasar 64.69 50.52 77.36 -0.70 -1.00 0.98 77.50 67.29 81.32 0.51 0.33 1.59 keasar 103
104 RBO−Proteus 63.12 48.12 76.02 -0.86 -1.23 0.83 64.06 53.85 76.60 -1.26 -1.15 0.90 RBO−Proteus 104
105 SHORTLE 62.19 49.48 75.71 -0.95 -1.10 0.79 62.19 49.48 75.71 -1.50 -1.63 0.77 SHORTLE 105
106 Bilab−UT 60.31 49.06 61.24 -1.14 -1.14 -0.85 60.31 49.06 61.37 -1.75 -1.67 -1.32 Bilab−UT 106
107 FLOUDAS 58.44 51.98 56.29 -1.33 -0.87 -1.42 59.69 53.02 56.29 -1.83 -1.24 -2.06 FLOUDAS 107
108 SAINT1 58.12 43.33 66.62 -1.36 -1.68 -0.24 58.12 43.33 66.62 -2.04 -2.30 -0.55 SAINT1 108
109 Handl−Lovell 58.12 40.42 69.68 -1.36 -1.95 0.10 61.88 50.21 70.07 -1.54 -1.55 -0.05 Handl−Lovell 109
110 FALCON_CONSENSUS 56.25 35.94 54.71 -1.55 -2.37 -1.60 75.62 63.85 70.78 0.26 -0.05 0.05 FALCON_CONSENSUS 110
111 3DShot2 52.19 41.98 43.37 -1.95 -1.81 -2.88 52.19 41.98 43.37 -2.82 -2.45 -3.94 3DShot2 111
112 3D−JIGSAW_AEP 49.06 41.15 46.27 -2.27 -1.88 -2.55 49.06 41.35 46.39 -3.23 -2.52 -3.50 3D−JIGSAW_AEP 112
113 DelCLab 47.81 29.48 45.11 -2.39 -2.98 -2.69 47.81 36.25 45.32 -3.40 -3.08 -3.65 DelCLab 113
114 Kolinski 46.88 37.71 46.20 -2.48 -2.21 -2.56 59.38 51.46 61.33 -1.87 -1.41 -1.32 Kolinski 114
115 Zhou−SPARKS 46.56 40.94 43.62 -2.52 -1.90 -2.86 46.56 40.94 43.62 -3.56 -2.57 -3.90 Zhou−SPARKS 115
116 DistillSN 45.94 33.65 50.85 -2.58 -2.59 -2.03 49.69 37.60 50.85 -3.15 -2.93 -2.85 DistillSN 116
117 MUFOLD−MD 45.62 32.29 46.60 -2.61 -2.72 -2.52 51.88 36.67 47.30 -2.86 -3.03 -3.36 MUFOLD−MD 117
118 Wolynes 41.25 38.75 56.89 -3.05 -2.11 -1.35 44.69 38.75 56.89 -3.81 -2.81 -1.97 Wolynes 118
119 Frankenstein 39.69 34.48 32.08 -3.20 -2.51 -4.17 76.25 71.25 72.02 0.35 0.77 0.23 Frankenstein 119
120 MUFOLD−Server 38.44 34.48 39.92 -3.33 -2.51 -3.28 56.56 40.94 50.98 -2.25 -2.57 -2.83 MUFOLD−Server 120
121 keasar−server 36.88 34.58 36.19 -3.49 -2.50 -3.70 75.00 63.12 71.78 0.18 -0.13 0.20 keasar−server 121
122 MeilerLabRene 32.19 30.52 41.33 -3.96 -2.88 -3.12 37.81 31.67 42.95 -4.71 -3.58 -4.00 MeilerLabRene 122
123 huber−torda−server 32.19 26.56 29.16 -3.96 -3.25 -4.50 32.19 26.56 32.41 -5.45 -4.15 -5.53 huber−torda−server 123
124 ACOMPMOD 31.56 23.85 33.72 -4.02 -3.51 -3.98 36.25 30.21 37.00 -4.92 -3.74 -4.86 ACOMPMOD 124
125 POISE 29.69 24.06 41.48 -4.21 -3.49 -3.10 43.75 34.38 57.72 -3.93 -3.29 -1.85 POISE 125
126 mariner1 29.69 23.85 25.63 -4.21 -3.51 -4.90 44.06 38.02 33.51 -3.89 -2.89 -5.37 mariner1 126
127 LOOPP_Server 29.38 27.81 33.60 -4.24 -3.14 -3.99 58.12 52.29 65.47 -2.04 -1.32 -0.72 LOOPP_Server 127
128 dill_ucsf 27.19 21.56 28.68 -4.46 -3.72 -4.55 28.44 21.98 32.29 -5.95 -4.65 -5.55 dill_ucsf 128
129 OLGAFS 25.94 24.06 21.34 -4.58 -3.49 -5.39 25.94 24.06 21.34 -6.28 -4.42 -7.14 OLGAFS 129
130 psiphifoldings 25.94 22.60 31.61 -4.58 -3.63 -4.22 25.94 22.60 31.61 -6.28 -4.58 -5.65 psiphifoldings 130
131 forecast 25.31 23.44 18.86 -4.64 -3.55 -5.67 25.62 23.44 19.61 -6.32 -4.49 -7.39 forecast 131
132 TWPPLAB 23.44 22.40 28.41 -4.83 -3.64 -4.58 23.44 22.40 28.41 -6.61 -4.60 -6.11 TWPPLAB 132
133 RANDOM 23.36 19.46 23.36 -4.84 -3.92 -5.16 23.36 19.46 23.36 -6.62 -4.93 -6.85 RANDOM 133
134 schenk−torda−server 22.50 18.85 26.18 -4.93 -3.98 -4.84 27.81 24.58 31.17 -6.03 -4.36 -5.71 schenk−torda−server 134
135 Pcons_local 21.88 19.58 6.07 -4.99 -3.91 -7.12 40.00 31.25 29.63 -4.43 -3.63 -5.93 Pcons_local 135
136 BHAGEERATH                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 BHAGEERATH 136
137 FEIG_REFINE                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 FEIG_REFINE 137
138 Fiser−M4T                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Fiser−M4T 138
139 HCA                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 HCA 139
140 KudlatyPredHuman                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 KudlatyPredHuman 140
141 LEE−SERVER                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 LEE−SERVER 141
142 Linnolt−UH−CMB                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Linnolt−UH−CMB 142
143 NIM2                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 NIM2 143
144 Nano_team                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Nano_team 144
145 NirBenTal                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 NirBenTal 145
146 PHAISTOS                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 PHAISTOS 146
147 PZ−UAM                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 PZ−UAM 147
148 ProteinShop                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 ProteinShop 148
149 RPFM                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 RPFM 149
150 Sasaki−Cetin−Sasai                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Sasaki−Cetin−Sasai 150
151 Scheraga                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Scheraga 151
152 TsaiLab                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 TsaiLab 152
153 UCDavisGenome                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 UCDavisGenome 153
154 Wolfson−FOBIA                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 Wolfson−FOBIA 154
155 YASARARefine                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 YASARARefine 155
156 dill_ucsf_extended                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 dill_ucsf_extended 156
157 igor                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 igor 157
158 jacobson                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 jacobson 158
159 mahmood−torda−server                   -4.84 -3.92 -5.16                   -6.61 -4.93 -6.85 mahmood−torda−server 159
160 mti                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 mti 160
161 mumssp                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 mumssp 161
162 ricardo                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 ricardo 162
163 rivilo                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 rivilo 163
164 sessions                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 sessions 164
165 taylor                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 taylor 165
166 test_http_server_01                   -4.84 -3.92 -5.16                   -6.62 -4.93 -6.85 test_http_server_01 166