| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG3111 |
All predicted COG clusters |
|---|---|---|---|
| 1g008040m | 580 | hhsearch probability: 91.34 Identity: 21% subject length: 128 Length of aligned reigon: 70 Coverage over query: 112-192 Coverage over subject: 58-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g008808m | 553 | hhsearch probability: 91.54 Identity: 17% subject length: 128 Length of aligned reigon: 82 Coverage over query: 92-193 Coverage over subject: 45-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g013865m | 435 | hhsearch probability: 91.84 Identity: 18% subject length: 128 Length of aligned reigon: 84 Coverage over query: 90-193 Coverage over subject: 43-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] |
| 1g013856m | 435 | hhsearch probability: 92.91 Identity: 18% subject length: 128 Length of aligned reigon: 84 Coverage over query: 90-193 Coverage over subject: 43-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] |
| 1g011197m | 491 | hhsearch probability: 93.48 Identity: 16% subject length: 128 Length of aligned reigon: 83 Coverage over query: 11-112 Coverage over subject: 45-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g006717m | 634 | hhsearch probability: 91.09 Identity: 14% subject length: 128 Length of aligned reigon: 72 Coverage over query: 116-200 Coverage over subject: 56-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g012612m | 460 | hhsearch probability: 95.17 Identity: 16% subject length: 128 Length of aligned reigon: 83 Coverage over query: 11-112 Coverage over subject: 45-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] |
| 1g011364m | 487 | hhsearch probability: 94.69 Identity: 17% subject length: 128 Length of aligned reigon: 84 Coverage over query: 10-112 Coverage over subject: 44-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g012426m | 464 | hhsearch probability: 94.87 Identity: 16% subject length: 128 Length of aligned reigon: 73 Coverage over query: 27-112 Coverage over subject: 55-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g012529m | 461 | hhsearch probability: 94.64 Identity: 18% subject length: 128 Length of aligned reigon: 73 Coverage over query: 27-112 Coverage over subject: 55-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] |
| 1g008405m | 567 | hhsearch probability: 95.13 Identity: 20% subject length: 128 Length of aligned reigon: 85 Coverage over query: 27-129 Coverage over subject: 43-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g010544m | 507 | hhsearch probability: 94.97 Identity: 20% subject length: 128 Length of aligned reigon: 83 Coverage over query: 29-129 Coverage over subject: 45-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g018229m | 359 | hhsearch probability: 94.57 Identity: 22% subject length: 128 Length of aligned reigon: 74 Coverage over query: 44-129 Coverage over subject: 54-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] |
| 1g017368m | 373 | hhsearch probability: 95.48 Identity: 20% subject length: 128 Length of aligned reigon: 84 Coverage over query: 28-129 Coverage over subject: 44-127 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g024592m | 265 | hhsearch probability: 95.84 Identity: 15% subject length: 128 Length of aligned reigon: 81 Coverage over query: 41-144 Coverage over subject: 43-127 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g043474m | 160 | hhsearch probability: 96.75 Identity: 13% subject length: 128 Length of aligned reigon: 71 Coverage over query: 36-132 Coverage over subject: 57-127 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] |
| 1g023576m | 280 | hhsearch probability: 96.73 Identity: 16% subject length: 128 Length of aligned reigon: 81 Coverage over query: 42-147 Coverage over subject: 43-127 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g044496m | 142 | hhsearch probability: 96.57 Identity: 20% subject length: 128 Length of aligned reigon: 66 Coverage over query: 35-109 Coverage over subject: 58-124 |
COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |