ECOD: domain e4v8mBs1

Domain ID e4v8mBs1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L40e

UID:	001442420
Type:	Automatic domain
Parent:	e2ayjA1
Range:	Bs:1-52
PDB:	4v8m
PDB Description:	UBIQUITIN-60S RIBOSOMAL PROTEIN L40
UniProt:	P21899
Hsap BLAST neighbor:	P62987
Species:

Domains in the same chain:

Download Pymol

e4v8mBs1	Bs:1-52	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4v8mA01	A0:20-115	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e4v8mA02	A0:116-238	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e4v8mA13	A1:9-113	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v8mA11	A1:173-256	SH3	SH3	SH3
e4v8mA12	A1:114-172	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8mA21	A2:4-190	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4v8mA31	A3:1-250	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4v8mA41	A4:102-193	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4v8mA42	A4:2-110	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4v8mA51	A5:2-130,A5:155-220	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8mA61	A6:2-188	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v8mA71	A7:1-315	beta-propeller-like	beta-propeller	7-bladed
e4v8mA81	A8:16-57	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8mA91	A9:88-153	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mAC1	AC:41-244	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4v8mAD1	AD:1-104	HTH	HTH	winged
e4v8mAE1	AE:15-174	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8mAF1	AF:24-144	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8mAG2	AG:83-142	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4v8mAG1	AG:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e4v8mAH1	AH:7-132	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8mAI1	AI:16-149	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4v8mAJ2	AJ:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4v8mAJ1	AJ:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4v8mAK1	AK:2-149	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v8mAL1	AL:2-128	HTH	HTH	FF domain
e4v8mAM1	AM:1-78,AM:99-153	HhH/H2TH	H2TH	H2TH
e4v8mAO1	AO:19-167	HTH	HTH	winged
e4v8mAP3	AP:186-263	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v8mAP2	AP:119-185	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4v8mAP1	AP:40-118	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4v8mAQ1	AQ:12-116	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4v8mAR1	AR:6-86	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e4v8mAS1	AS:2-143	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8mAT1	AT:7-137	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8mAU1	AU:49-112	HTH	HTH	winged
e4v8mAV1	AV:2-102	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8mAW1	AW:2-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mAX1	AX:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4v8mAX2	AX:92-208	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4v8mAY1	AY:2-66	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e4v8mAZ1	AZ:36-103	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8mBa1	Ba:2-133	SH3	SH3	SH3
e4v8mBb1	Bb:2-145	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8mBc1	Bc:5-145	RPL28	RPL28	RPL28
e4v8mBd1	Bd:2-61	RPL29	RPL29	RPL29
e4v8mBe1	Be:69-254	SH3	SH3	SH3
e4v8mBf1	Bf:53-442	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8mBg1	Bg:19-114	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8mBh1	Bh:81-188	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v8mBi1	Bi:2-130	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v8mBI1	BI:2-193	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8mBj1	Bj:5-108	Glucocorticoid receptor-like	RPL34	RPL34
e4v8mBJ1	BJ:1-53,BJ:150-214	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e4v8mBJ2	BJ:54-149	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e4v8mBk1	Bk:44-127	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v8mBK1	BK:2-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v8mBl1	Bl:34-149	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8mBL1	BL:13-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v8mBm1	Bm:2-108	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v8mBM2	BM:75-145	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4v8mBM1	BM:7-74	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e4v8mBn1	Bn:2-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mBN1	BN:1-216	RPL13	RPL13	RPL13
e4v8mBo1	Bo:2-93	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mBO1	BO:22-222	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v8mBp1	Bp:2-69	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v8mBP1	BP:2-184	SH3	SH3	SH3
e4v8mBq1	Bq:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v8mBQ1	BQ:19-221	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8mBr2	Br:3-295	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4v8mBR1	BR:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v8mBs1	Bs:1-52	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mBS1	BS:71-179	GP2-like	RplX-like	RplX-like
e4v8mBS2	BS:1-70	GP2-like	RplX-like	RplX-like
e4v8mBt1	Bt:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8mBT1	BT:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v8mBT2	BT:57-201	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v8mBu1	Bu:2-300	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8mBU1	BU:2-159	SH3	SH3	SH3
e4v8mBv1	Bv:2-109,Bv:143-192	SH3	SH3	SH3
e4v8mBV1	BV:21-124	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v8mBw1	Bw:1-257	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v8mBW1	BW:2-139	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8mBx1	Bx:37-276	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8mBX1	BX:44-164	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8mBy2	By:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8mBy1	By:86-189	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8mBY1	BY:1-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8mBZ1	BZ:2-126	SH3	SH3	SH3