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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

X: dsRBD-like
H: dsRNA-binding domain-like
T: dsRNA-binding domain-like
F: Ribosomal_S5

PF00333 CL0196

Representatives:

e1pkpA1[A:4-77] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION

e2b9oE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1hr0E1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.2Å

e2uubE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e1hnxE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.4Å

e2hgrH1[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1i94E1[E:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: WO2 ; X-RAY DIFFRACTION 3.2Å

e1j5eE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.05Å

e1n33E1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.35Å

e1i97E1[E:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 4.5Å

e2b9mE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2uxcE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: K,MG ; X-RAY DIFFRACTION 2.900Å

e1xmqE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S Ribosomal Protein S5 ; X-RAY DIFFRACTION 3.0Å

e1hnwE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.4Å

e2f4vE1[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.8Å

e2wdgE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3zvoE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4dr2E2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.25Å

e1voqE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4g5kH1[H:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4duyE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.39Å

e3v6uE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3zn7E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1s1hE1[E:74-143] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2zkqe1[e:9-75] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2uxbE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.10Å

e2v46E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2v48E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2uxdE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.20Å

e2vqeE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: K ; X-RAY DIFFRACTION 2.50Å

e2vqfE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: K ; X-RAY DIFFRACTION 2.90Å

e3d5aE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3d5cE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3f1eE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3f1gE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ficE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wdhE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2wdkE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2wdmE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2wh1E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wh3E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3huwE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3huyE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wriE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrkE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrnE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrqE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3knhE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3knjE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3knlE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3knnE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3i8gH1[H:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3i8hH1[H:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3i9bH1[H:2-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3i9dH1[H:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2x9rE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2x9tE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3mr8E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ms0E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2xfzE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2xg1E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ogeE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ogyE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ohcE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ohdE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3ohyE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3oi0E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3oi2E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3oi4E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3pynE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3pyqE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3pysE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3pyuE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1fkaE1[E:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.3Å

e4gkjE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S ribosomal protein S5 ; X-RAY DIFFRACTION 3.000Å

e4khpE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S Ribosomal protein S5 ; X-RAY DIFFRACTION 3.1Å

e4gkkE1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S ribosomal protein S5 ; X-RAY DIFFRACTION 3.2Å

e1gixH1[H:5-69] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1jgoH1[H:5-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 5.6Å

e1jgpH1[H:5-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 7.0Å

e1jgqH1[H:5-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 5.0Å

e1ml5H1[H:5-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ELECTRON MICROSCOPY

e4juwE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4jv5E2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.16Å

e4jyaE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.1Å

e4k0lE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4k0pE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4k0kE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.4Å

e4kbtE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kbvE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kcyE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kd0E2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kd8E2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kdaE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kdgE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kdjE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kfhE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4kfkE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4l6kE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4l6mE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4b3mE2[E:1-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 2.90Å

e4b3rE2[E:1-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.00Å

e4b3sE2[E:1-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.15Å

e4b3tE2[E:1-69] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.00Å

e4btcE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4bybE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4bydE2[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4cr1E1[E:5-73] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4ji1E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.14Å

e4ji0E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.49Å

e4ji3E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.350Å

e4ji2E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.640Å

e4ji4E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.69Å

e4ji8E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.740Å

e4ji7E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.500Å

e4ji5E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.85Å

e4ji6E6[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.55Å

e2y0uE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y0wE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y0yE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1iblE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.11Å

e1pnsE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1pnxE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y10E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y18E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3t1hE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.11Å

e2xqdE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y14E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1ibkE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.31Å

e1ibmE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.31Å

e4aqyE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.50Å

e3otoE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.69Å

e2y12E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3tvfH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4abrE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2zm6E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

30S ribosomal protein S5 ; X-RAY DIFFRACTION 3.200Å

e3kiqe4[e:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kise4[e:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2y16E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4ej9E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3v6vE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3v22E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2xsyE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kiue4[e:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kixe4[e:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4ejaE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2xuyE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3t1yE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 2.8Å

e3v2eE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3uxtE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uxsE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3v2cE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3uzgH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uzlH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uz3H4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3uz6H4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uydH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4dhbE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4dh9E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3v28E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3v26E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3v24E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uz4H4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3tvgH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3uz7H4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uyfH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3uzmH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uziH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4dr1E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.6Å

e4dv7E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.29Å

e4dv6E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.3Å

e4dr3E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.35Å

e4dr6E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.3Å

e4dr5E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.45Å

e4dv0E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.85Å

e4dv3E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.55Å

e4dv1E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.85Å

e4duzE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.65Å

e4dv2E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.65Å

e4dv5E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; X-RAY DIFFRACTION 3.68Å

e4dv4E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.65Å

e4dr7E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.75Å

e4g5tH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4dr4E4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S RIBOSOMAL PROTEIN S5 ; ligands: MG ; X-RAY DIFFRACTION 3.97Å

e3zndE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4g5vH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4b8fE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4b8hE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4g5mH4[H:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e2ow8f4[f:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qnhf4[f:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vosE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vovE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1voxE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vozE4[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4nvuE2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4nvwE2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4nvyE2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4nw0E2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e4ox9E2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S ribosomal protein S5 ; X-RAY DIFFRACTION 3.800Å

e4nxmE2[E:5-72] Image Pymol Jmol Links: PDB, SCOP, CATH

ribosomal protein S5 ; ligands: MG ; X-RAY DIFFRACTION 3.65Å

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e3j6vE2[E:216-286] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4v6iAE2[AE:109-175] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein rpS2 (S5p) ; ELECTRON MICROSCOPY

e5o5jE1[E:35-103] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

30S ribosomal protein S5 ; ligands: MG ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes