PF00624 |
G0V5G5 |
340-380 |
nD3 |
336-380 |
45 |
e3tipA2 |
3TIP |
706.2.1 |
0.908 |
0.0 |
0.0 |
3.4|3.4|1 |
0.813 |
0.57 |
pymol |
more |
good_domain |
beta complex topology |
Head domain of nucleotide exchange factor GrpE |
G5 and E repeats in surface protein G |
G5 and E repeats in surface protein G |
0 |
3 |
yes:out |
yes:out |
PF00845 |
A0A6A4LX10 |
12-279 |
nD1 |
16-170 |
155 |
e6sclC1 |
6SCL |
10.2.1 |
0.946 |
0.897 |
0.735 |
6.9|8.1|1 |
0.781 |
0.67 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
1 |
10 |
no |
no |
PF00904 |
H2N5R0 |
226-235 |
nD2 |
171-635 |
465 |
e5j44B2 |
5J44 |
207.2.1 |
0.928 |
0.0 |
0.0 |
16.5|18.9|1 |
0.852 |
1.224 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
25 |
no |
no |
PF01054 |
O70316 |
52-209 |
nD1 |
151-210 |
60 |
e3ln7A8 |
3LN7 |
2003.1.10 |
0.881 |
0.0 |
0.0 |
3.3|3.4|0 |
0.757 |
0.553 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
PreATP-grasp domain |
1 |
3 |
no |
yes:out |
PF01054 |
O70315 |
52-209 |
nD1 |
151-205 |
55 |
e6x0ap1 |
6X0A |
101.1.11 |
0.852 |
0.0 |
0.0 |
3.2|3.5|0 |
0.597 |
0.894 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
1 |
3 |
no |
yes:out |
PF01107 |
A0A2I0A4U9 |
42-205 |
nD1 |
31-210 |
180 |
e4bcuA1 |
4BCU |
10.2.1 |
0.949 |
0.0 |
0.0 |
7.3|8.0|1 |
0.835 |
0.778 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
3 |
9 |
no |
no |
PF01107 |
G7KAZ6 |
17-194 |
nD2 |
36-190 |
155 |
e1stmB1 |
1STM |
10.2.1 |
0.934 |
0.0 |
0.0 |
9.6|10.1|1 |
0.912 |
0.67 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
3 |
6 |
no |
no |
PF01160 |
H2ZS26 |
25-71 |
nD1 |
21-75 |
55 |
e5uh7A1 |
5UH7 |
325.1.7 |
0.928 |
0.0 |
0.0 |
4.7|4.7|1 |
0.594 |
0.688 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Single hybrid motif |
3 |
0 |
yes:out |
no |
PF01295 |
M4R7B7 |
248-817 |
nD3 |
441-675 |
235 |
e6uj5B2 |
6UJ5 |
2484.1.1 |
0.896 |
0.0 |
0.0 |
5.4|5.4|1 |
0.72 |
1.199 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
5 |
8 |
no |
no |
PF01295 |
Q6LLN1 |
230-833 |
nD3 |
421-535 |
115 |
e7aqrQ1 |
7AQR |
3203.1.1 |
0.897 |
0.0 |
0.0 |
4.3|4.3|1 |
0.604 |
0.966 |
pymol |
more |
good_domain |
a+b two layers |
Putative oxidoreductase |
Putative oxidoreductase |
Putative oxidoreductase |
3 |
4 |
no |
no |
PF01295 |
Q6LLN1 |
230-833 |
nD4 |
536-570,593-705 |
148 |
e6rm3SO01 |
6RM3 |
2484.1.1 |
0.889 |
0.0 |
0.0 |
4.1|4.9|1 |
0.722 |
0.755 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
2 |
7 |
no |
no |
PF01446 |
B9ECE0 |
71-328 |
nD1 |
26-330 |
305 |
e2x3gA1 |
2X3G |
304.8.1 |
0.862 |
0.62 |
0.62 |
7.6|7.6|1 |
0.99 |
3.631 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
9 |
9 |
no |
no |
PF01446 |
A0A0P8YPK3 |
58-301 |
nD1 |
6-25,71-270 |
220 |
e2x3gA1 |
2X3G |
304.8.1 |
0.903 |
0.667 |
0.667 |
6.3|6.3|1 |
0.987 |
2.619 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
6 |
6 |
no |
no |
PF01508 |
A0C1X2 |
111-171 |
nD1 |
136-208 |
73 |
e3psmA1 |
3PSM |
387.1.5 |
0.882 |
0.0 |
0.0 |
2.4|2.4|1 |
0.762 |
1.659 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
Scorpion toxin-like |
1 |
4 |
yes:out |
no |
PF01540 |
O53101 |
137-245 |
nD2 |
126-230 |
105 |
e4uxvA1 |
4UXV |
632.22.1 |
0.9 |
0.608 |
0.0 |
9.1|11.8|0 |
0.931 |
1.01 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
yes:out |
no |
PF01540 |
O53100 |
137-248 |
nD2 |
121-235 |
115 |
e4uxvA4 |
4UXV |
632.22.1 |
0.898 |
0.858 |
0.0 |
8.0|12.0|0 |
0.959 |
1.106 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
yes:out |
no |
PF01562 |
A0A1S3JGT4 |
40-145 |
nD1 |
36-60,91-200 |
135 |
e6o38M1 |
6O38 |
3338.2.1 |
0.866 |
0.551 |
0.654 |
4.6|4.6|1 |
0.688 |
0.925 |
pymol |
more |
good_domain |
a+b two layers |
Fragilysin-3 prodomain-like |
Type II secretion chaperone CpaB |
Type II secretion chaperone CpaB |
1 |
12 |
yes:out |
no |
PF01681 |
E3MMF7 |
39-128 |
nD1 |
61-130 |
70 |
e2xwbF3 |
2XWB |
389.1.2 |
0.945 |
0.0 |
0.104 |
2.4|3.1|0 |
0.738 |
1.111 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
Complement control module/SCR domain |
0 |
6 |
yes:out |
no |
PF01683 |
A0A1S3JE30 |
77-127 |
nD3 |
86-129 |
44 |
e2flgA1 |
2FLG |
389.1.1 |
0.925 |
0.903 |
0.953 |
0.0|2.9|0 |
0.644 |
1.035 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
0 |
4 |
no |
no |
PF01683 |
A0A158Q040 |
332-386 |
nD5 |
336-390 |
55 |
e2n1nA1 |
2N1N |
387.1.1 |
0.944 |
0.0 |
0.0 |
3.2|3.4|0 |
0.896 |
1.528 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
omega toxin-related |
0 |
6 |
yes:out |
no |
PF01757 |
A0A3S2L120 |
191-573 |
nD3 |
191-260,336-510 |
245 |
e6a2jA1 |
6A2J |
5069.1.1 |
0.9 |
0.0 |
0.0 |
4.6|4.6|1 |
0.443 |
1.156 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
8 |
1 |
no |
yes:6 |
PF01809 |
A0A1I1JTE7 |
95-153 |
nD2 |
21-150 |
130 |
e3hzqA1 |
3HZQ |
5056.1.1 |
0.895 |
0.108 |
0.122 |
4.7|4.7|1 |
0.799 |
1.383 |
pymol |
more |
good_domain |
extended segments |
Gated mechanosensitive channel |
Gated mechanosensitive channel |
Gated mechanosensitive channel |
3 |
0 |
no |
yes:2 |
PF01827 |
Q9XU20 |
201-340 |
nD3 |
116-370 |
255 |
e4r5dA1 |
4R5D |
207.1.1 |
0.944 |
0.457 |
0.43 |
9.3|10.0|1 |
0.397 |
0.898 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
5 |
15 |
no |
no |
PF01827 |
O45480 |
123-268 |
nD2 |
41-300 |
260 |
e5y3sC1 |
5Y3S |
207.1.1 |
0.874 |
0.0 |
0.611 |
7.0|7.9|1 |
0.815 |
0.915 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
5 |
16 |
no |
no |
PF01914 |
P25743 |
8-210 |
nD1 |
11-210 |
200 |
e2v8nB2 |
2V8N |
5050.1.1 |
0.88 |
0.272 |
0.398 |
5.4|9.1|0 |
0.648 |
0.907 |
pymol |
more |
good_domain |
alpha complex topology |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
6 |
0 |
no |
yes:6 |
PF01927 |
O53776 |
97-241 |
nD2 |
96-180 |
85 |
e3r5sA1 |
3R5S |
2007.1.14 |
0.946 |
0.0 |
0.0 |
5.7|6.5|0 |
0.797 |
0.59 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Chelatase-like |
3 |
3 |
no |
no |
PF01927 |
Q13TC6 |
96-240 |
nD3 |
181-240 |
60 |
e3hi2A1 |
3HI2 |
375.1.1 |
0.854 |
0.975 |
0.974 |
0.0|0.0|0 |
0.786 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
3 |
2 |
no |
no |
PF01927 |
A0A0Q2RC10 |
1-145 |
nD1 |
1-85 |
85 |
e1s8nA3 |
1S8N |
2007.1.3 |
0.881 |
0.0 |
0.579 |
5.4|5.4|1 |
0.736 |
0.667 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
4 |
4 |
no |
no |
PF01959 |
A0A5P0YXL5 |
2-367 |
nD1 |
1-180 |
180 |
e7e1qA1 |
7E1Q |
2002.1.1 |
0.925 |
0.663 |
0.885 |
8.6|16.1|1 |
0.741 |
0.575 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
7 |
8 |
no |
no |
PF01959 |
A0A7W3WNY9 |
2-367 |
nD1 |
1-180 |
180 |
e6bkaA1 |
6BKA |
2002.1.1 |
0.92 |
0.621 |
0.895 |
8.3|16.1|1 |
0.745 |
0.575 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
7 |
8 |
no |
no |
PF01959 |
A0A3N5AQD2 |
2-367 |
nD1 |
1-180 |
180 |
e2p10C1 |
2P10 |
2002.1.1 |
0.922 |
0.719 |
0.897 |
10.7|16.3|1 |
0.775 |
0.575 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
7 |
8 |
no |
no |
PF01963 |
A0A679H3C2 |
1-255 |
nD1 |
1-255 |
255 |
e5t09A1 |
5T09 |
4244.1.1 |
0.883 |
0.487 |
0.951 |
4.1|5.5|1 |
0.52 |
1.0 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
EreA/ChaN-like |
EreA/ChaN-like |
EreA/ChaN-like |
13 |
5 |
no |
no |
PF01970 |
C1D2E8 |
11-444 |
nD1 |
6-125,236-385 |
270 |
e4uvmA1 |
4UVM |
5050.1.1 |
0.9 |
0.229 |
0.0 |
3.0|8.0|0 |
0.469 |
1.224 |
pymol |
more |
good_domain |
alpha complex topology |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
9 |
0 |
no |
yes:6 |
PF01970 |
D7A9X6 |
23-440 |
nD2 |
141-190,436-490 |
105 |
e6xboA1 |
6XBO |
5059.1.1 |
0.916 |
0.0 |
0.0 |
6.3|6.3|1 |
0.73 |
0.7 |
pymol |
more |
good_domain |
alpha bundles |
Drug/Metabolite transporter |
Drug/Metabolite transporter |
Drug/Metabolite transporter |
4 |
0 |
no |
yes:4 |
PF01998 |
G4RM22 |
16-79 |
nD1 |
6-30,41-80 |
65 |
e3mk7M3 |
3MK7 |
5040.1.1 |
0.935 |
0.0 |
0.0 |
3.8|3.8|1 |
0.682 |
0.684 |
pymol |
more |
good_domain |
extended segments |
Cytochrome c oxidase subunit II-like, transmembrane region |
Cytochrome c oxidase subunit II-like, transmembrane region |
Cytochrome c oxidase subunit II-like, transmembrane region |
2 |
2 |
no |
yes:2 |
PF02194 |
U7PV06 |
197-390 |
nD2 |
181-250,1146-1170 |
95 |
e5ajaB1 |
5AJA |
3788.1.1 |
0.909 |
0.0 |
0.0 |
6.7|6.7|1 |
0.777 |
1.067 |
pymol |
more |
good_domain |
alpha bundles |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
4 |
0 |
no |
yes:out |
PF02363 |
A0A2P8YAV2 |
164-181 |
nD2 |
61-240 |
180 |
e6pogB3 |
6POG |
389.1.1 |
0.948 |
0.0 |
0.918 |
2.9|5.9|1 |
0.813 |
4.235 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
0 |
19 |
no |
no |
PF02387 |
C3M8B0 |
2-270 |
nD2 |
201-270 |
70 |
e1cf7B1 |
1CF7 |
101.1.2 |
0.865 |
0.0 |
0.0 |
3.5|4.2|1 |
0.694 |
0.737 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
0 |
no |
yes:out |
PF02392 |
P49526 |
4-179 |
nD2 |
1-10,86-180 |
105 |
e4z2mB2 |
4Z2M |
220.1.1 |
0.94 |
0.0 |
0.566 |
6.6|8.6|1 |
0.868 |
0.861 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF02392 |
Q4G3A9 |
2-172 |
nD2 |
1-10,81-174 |
104 |
e7nkyO3 |
7NKY |
220.1.1 |
0.934 |
0.0 |
0.549 |
7.1|8.5|1 |
0.89 |
0.852 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF02393 |
B5XAY6 |
25-133 |
nD1 |
6-145 |
140 |
e3ffvA1 |
3FFV |
4205.1.1 |
0.944 |
0.776 |
0.868 |
4.7|4.8|1 |
0.646 |
0.826 |
pymol |
more |
good_domain |
a+b two layers |
SMI1/KNR4-like |
SMI1/KNR4-like |
SMI1/KNR4-like |
5 |
7 |
no |
no |
PF02411 |
A0A292YCV3 |
80-189 |
nD2 |
86-185 |
100 |
e4u7oA2 |
4U7O |
605.1.1 |
0.944 |
0.0 |
0.0 |
5.7|5.7|1 |
0.859 |
1.37 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
no |
yes:3 |
PF02414 |
I0FF30 |
10-296 |
nD2 |
151-205 |
55 |
e2j5yA1 |
2J5Y |
632.2.1 |
0.853 |
0.0 |
0.0 |
5.6|5.6|1 |
0.886 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
3 |
1 |
no |
no |
PF02448 |
Q27364 |
25-91 |
nD1 |
21-95 |
75 |
e4v61AT1 |
4V61 |
604.9.1 |
0.857 |
0.0 |
0.0 |
3.6|5.0|1 |
0.59 |
0.872 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
4 |
0 |
yes:out |
no |
PF02494 |
A0A843BML3 |
1-76 |
nD1 |
1-78 |
78 |
e6nz0Z1 |
6NZ0 |
11.1.1 |
0.907 |
0.0 |
0.104 |
7.5|7.6|1 |
0.792 |
0.722 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
6 |
no |
no |
PF02498 |
Q30S10 |
15-109 |
nD1 |
11-120 |
110 |
e1bm8A1 |
1BM8 |
101.1.9 |
0.949 |
0.0 |
0.0 |
3.9|3.9|1 |
0.816 |
1.257 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
5 |
4 |
no |
no |
PF02505 |
Q2NI01 |
20-167 |
nD1 |
16-55,76-173 |
138 |
e6fubA1 |
6FUB |
304.3.1 |
0.885 |
0.0 |
0.316 |
8.5|8.8|0 |
0.957 |
1.917 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
HMA-related |
HMA, heavy metal-associated domain |
3 |
7 |
no |
no |
PF02521 |
A0A1Q2P667 |
2-434 |
nD1 |
6-434 |
429 |
e4ft6A1 |
4FT6 |
5084.5.1 |
0.895 |
0.996 |
0.997 |
29.3|29.3|1 |
0.914 |
1.166 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
22 |
no |
no |
PF02521 |
A0A1Q2RNL5 |
2-434 |
nD1 |
6-434 |
429 |
e4ft6A1 |
4FT6 |
5084.5.1 |
0.895 |
0.996 |
0.997 |
29.2|29.2|1 |
0.914 |
1.166 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
22 |
no |
no |
PF02521 |
A0A1Q2QSX8 |
2-434 |
nD1 |
6-434 |
429 |
e4ft6A1 |
4FT6 |
5084.5.1 |
0.892 |
0.996 |
0.997 |
29.3|29.3|1 |
0.914 |
1.166 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
22 |
no |
no |
PF02530 |
A0A531JPL0 |
1-320 |
nD1 |
1-335 |
335 |
e5mdqB1 |
5MDQ |
5084.5.1 |
0.938 |
0.991 |
1.0 |
23.1|23.6|1 |
0.877 |
0.91 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
17 |
no |
no |
PF02530 |
A0A3S3JSZ0 |
13-315 |
nD2 |
1-10,26-60,81-323 |
288 |
e5mdqB1 |
5MDQ |
5084.5.1 |
0.925 |
0.987 |
1.0 |
21.1|21.7|1 |
0.858 |
0.783 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
16 |
no |
no |
PF02530 |
A0A529UI52 |
12-322 |
nD1 |
1-330 |
330 |
e6eusB1 |
6EUS |
5084.5.1 |
0.919 |
0.999 |
0.999 |
21.2|21.8|1 |
0.863 |
0.897 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
19 |
no |
no |
PF02639 |
Q24VV0 |
18-142 |
nD1 |
1-140 |
140 |
e3ot5B2 |
3OT5 |
7512.1.1 |
0.874 |
0.602 |
0.665 |
8.2|8.2|1 |
0.629 |
0.7 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
5 |
6 |
no |
no |
PF02639 |
A8YZV2 |
17-146 |
nD1 |
1-145 |
145 |
e3on5B3 |
3ON5 |
2003.1.1 |
0.928 |
0.358 |
0.784 |
8.2|8.2|1 |
0.808 |
0.74 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
6 |
5 |
no |
no |
PF02654 |
E8QWS8 |
13-251 |
nD1 |
6-255 |
250 |
e6m31B1 |
6M31 |
141.1.1 |
0.888 |
0.0 |
0.0 |
4.8|4.8|1 |
0.4 |
0.799 |
pymol |
more |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
10 |
1 |
no |
yes:6 |
PF02659 |
Q6APV5 |
30-183 |
nD1 |
6-160 |
155 |
e6s7vA2 |
6S7V |
5050.1.1 |
0.902 |
0.3 |
0.199 |
8.6|9.8|1 |
0.407 |
0.703 |
pymol |
more |
good_domain |
alpha complex topology |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
4 |
0 |
no |
yes:5 |
PF02701 |
A0A6A6L182 |
26-82 |
nD1 |
31-65 |
35 |
e2aklA2 |
2AKL |
375.1.1 |
0.916 |
0.561 |
0.77 |
0.0|3.1|1 |
0.684 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF02707 |
O88138 |
84-278 |
nD1 |
31-290,396-598 |
463 |
e5m9bA1 |
5M9B |
5084.5.3 |
0.936 |
0.0 |
0.111 |
11.9|11.9|1 |
0.683 |
0.819 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
2 |
22 |
yes:out |
no |
PF02707 |
F7IWA5 |
96-288 |
nD1 |
31-75,96-245,261-290,551-758 |
433 |
e1fi1A1 |
1FI1 |
5084.5.3 |
0.931 |
0.0 |
0.15 |
15.3|16.2|1 |
0.684 |
0.766 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
0 |
23 |
yes:out |
no |
PF02720 |
A1T141 |
21-324 |
nD1 |
16-140 |
125 |
e3mkwB1 |
3MKW |
101.1.1 |
0.938 |
0.56 |
0.505 |
3.8|4.3|0 |
0.951 |
1.712 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
7 |
0 |
no |
no |
PF02722 |
F7IWA5 |
555-758 |
nD1 |
31-75,96-245,261-290,551-758 |
433 |
e1fi1A1 |
1FI1 |
5084.5.3 |
0.931 |
0.0 |
0.15 |
15.3|16.2|1 |
0.684 |
0.766 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
0 |
23 |
yes:out |
no |
PF02722 |
O88138 |
400-598 |
nD1 |
31-290,396-598 |
463 |
e5m9bA1 |
5M9B |
5084.5.3 |
0.936 |
0.0 |
0.111 |
11.9|11.9|1 |
0.683 |
0.819 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
2 |
22 |
yes:out |
no |
PF02791 |
A5DR64 |
427-488 |
nD6 |
426-490,571-665,796-815,856-885,961-1025,1101-1115 |
290 |
e2ve7D1 |
2VE7 |
193.1.1 |
0.927 |
0.528 |
0.0 |
4.9|7.0|0 |
0.584 |
2.339 |
pymol |
more |
good_domain |
alpha bundles |
CH domain-like |
Calponin-homology domain-like |
Calponin-homology domain-like |
16 |
4 |
no |
no |
PF02791 |
A7RWX9 |
419-480 |
nD5 |
416-485,516-640 |
195 |
e2ve7D1 |
2VE7 |
193.1.1 |
0.885 |
0.207 |
0.0 |
5.4|7.3|0 |
0.693 |
1.573 |
pymol |
more |
good_domain |
alpha bundles |
CH domain-like |
Calponin-homology domain-like |
Calponin-homology domain-like |
8 |
0 |
no |
no |
PF02990 |
K0KHP8 |
62-603 |
nD3 |
266-285,326-335,496-640 |
175 |
e4ll8A1 |
4LL8 |
109.4.1 |
0.912 |
0.0 |
0.0 |
5.0|5.4|0 |
0.718 |
0.612 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
0 |
no |
yes:5 |
PF03000 |
M1A6F2 |
217-476 |
nD2 |
141-315 |
175 |
e3i3nB3 |
3I3N |
109.27.1 |
0.894 |
0.995 |
0.888 |
4.5|6.3|0 |
0.824 |
1.667 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
BACK domain |
BACK domain |
7 |
0 |
no |
no |
PF03040 |
Q19V69 |
8-236 |
nD1 |
1-45,51-150 |
145 |
e4iloB5 |
4ILO |
3755.3.1 |
0.851 |
0.0 |
0.0 |
6.6|6.9|0 |
0.689 |
0.843 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:2 |
PF03072 |
A0A0H3DPT9 |
408-534 |
nD3 |
316-575 |
260 |
e4m4dB2 |
4M4D |
883.1.1 |
0.863 |
0.0 |
0.0 |
4.7|4.7|1 |
0.72 |
1.198 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
7 |
8 |
no |
no |
PF03085 |
Q4UHN7 |
181-423 |
nD3 |
236-255,311-440,506-540 |
185 |
e3pmdA1 |
3PMD |
106.1.1 |
0.902 |
0.0 |
0.0 |
5.5|5.5|1 |
0.654 |
1.259 |
pymol |
more |
good_domain |
alpha arrays |
Globin-like |
Globin-like |
Globin-like |
7 |
3 |
yes:out |
no |
PF03087 |
M1DZL7 |
49-265 |
nD1 |
21-115,131-200,231-268 |
203 |
e7jh6B1 |
7JH6 |
3684.1.1 |
0.875 |
0.0 |
0.0 |
9.1|9.4|0 |
0.746 |
1.611 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
7 |
0 |
no |
no |
PF03087 |
B9SCA8 |
40-274 |
nD1 |
21-185,216-275 |
225 |
e6fpdA1 |
6FPD |
3758.1.1 |
0.857 |
0.0 |
0.0 |
10.2|10.2|1 |
0.79 |
0.636 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial hemolysins-like |
Bacterial hemolysins |
Bacterial hemolysins |
7 |
0 |
no |
no |
PF03094 |
A0A3B6LTV6 |
10-528 |
nD1 |
16-85 |
70 |
e3do9A2 |
3DO9 |
192.28.1 |
0.925 |
0.0 |
0.0 |
5.6|5.7|0 |
0.897 |
1.207 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
IDEAL domain |
IDEAL domain |
3 |
0 |
no |
yes:2 |
PF03094 |
Q9SXB6 |
7-500 |
nD1 |
11-85 |
75 |
e4i0xF1 |
4I0X |
150.5.1 |
0.921 |
0.0 |
0.0 |
4.9|4.9|1 |
0.9 |
0.806 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
ESAT-6 like |
ESAT-6 like |
3 |
0 |
no |
yes:2 |
PF03121 |
Q57Z42 |
509-566 |
nD3 |
471-570 |
100 |
e3db7A4 |
3DB7 |
809.2.1 |
0.939 |
0.0 |
0.0 |
4.2|4.6|0 |
0.975 |
1.626 |
pymol |
more |
good_domain |
a+b two layers |
BLIP-like |
BT0923-like |
BT0923-like |
1 |
4 |
no |
no |
PF03124 |
Q2UT91 |
16-377 |
nD3 |
6-50,146-380 |
280 |
e3ddlA1 |
3DDL |
5001.1.1 |
0.892 |
0.0 |
0.0 |
7.8|8.5|1 |
0.84 |
0.981 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
6 |
0 |
no |
yes:3 |
PF03124 |
A0A1E3NMT1 |
16-375 |
nD2 |
11-55,126-390 |
310 |
e2ksyA1 |
2KSY |
5001.1.1 |
0.896 |
0.0 |
0.0 |
6.8|7.6|1 |
0.854 |
1.086 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
10 |
0 |
no |
yes:7 |
PF03128 |
A7RN76 |
297-309 |
nD3 |
271-330 |
60 |
e3nsjA2 |
3NSJ |
389.1.1 |
0.87 |
0.0 |
0.0 |
2.6|3.2|0 |
0.865 |
1.412 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
0 |
3 |
yes:out |
no |
PF03186 |
A0A7W6DVA6 |
7-291 |
nD1 |
1-308 |
308 |
e7rdrC2 |
7RDR |
109.3.1 |
0.88 |
0.0 |
0.0 |
5.7|5.7|1 |
0.487 |
1.548 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
11 |
1 |
yes:in |
yes:4 |
PF03196 |
Q9S0J3 |
5-139 |
nD1 |
1-140 |
140 |
e3b79A1 |
3B79 |
219.1.1 |
0.884 |
0.0 |
0.257 |
7.6|9.1|1 |
0.865 |
0.625 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
5 |
no |
no |
PF03196 |
W5T353 |
1-136 |
nD1 |
1-138 |
138 |
e3b79A1 |
3B79 |
219.1.1 |
0.875 |
0.0 |
0.0 |
7.2|9.6|1 |
0.84 |
0.616 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
5 |
no |
no |
PF03196 |
W5SG99 |
1-136 |
nD1 |
1-138 |
138 |
e3k8uA1 |
3K8U |
219.1.1 |
0.892 |
0.0 |
0.0 |
7.6|9.6|1 |
0.843 |
0.616 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
5 |
no |
no |
PF03207 |
Q44595 |
1-246 |
nD1 |
31-115,196-210,221-245 |
125 |
e1s35A1 |
1S35 |
604.1.1 |
0.887 |
0.0 |
0.0 |
10.2|10.4|0 |
0.891 |
1.136 |
pymol |
na |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
yes:out |
no |
PF03207 |
A0A7D7WK68 |
1-245 |
nD2 |
71-155,176-250 |
160 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.919 |
0.0 |
0.0 |
10.0|11.0|0 |
0.986 |
0.97 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
yes:out |
no |
PF03208 |
D5GMZ6 |
30-172 |
nD1 |
56-165 |
110 |
e2zqmA1 |
2ZQM |
192.2.1 |
0.897 |
0.0 |
0.0 |
5.3|5.3|1 |
0.939 |
1.028 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
2 |
2 |
no |
yes:2 |
PF03238 |
A0A3L6LCC1 |
99-326 |
nD1 |
51-140,281-330 |
140 |
e4avmA1 |
4AVM |
4177.1.1 |
0.945 |
0.0 |
0.0 |
11.4|11.4|1 |
0.669 |
0.561 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
3 |
0 |
no |
no |
PF03238 |
P04478 |
99-328 |
nD1 |
26-165,191-220,246-320 |
245 |
e4e40A1 |
4E40 |
3633.1.1 |
0.931 |
0.0 |
0.0 |
11.6|11.6|1 |
0.851 |
1.077 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Haptoglobin-hemoglobin receptor |
Haptoglobin-hemoglobin receptor |
Haptoglobin-hemoglobin receptor |
6 |
4 |
yes:out |
no |
PF03258 |
A0A6S7HDQ7 |
6-157 |
nD2 |
1-10,116-170 |
65 |
e2jrbA1 |
2JRB |
330.9.1 |
0.906 |
0.673 |
0.255 |
4.9|4.9|1 |
0.862 |
0.812 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
C-terminal domain in LINE-1 ORF1p |
C-terminal domain in LINE-1 ORF1p |
3 |
3 |
no |
no |
PF03268 |
A8X6W9 |
10-368 |
nD1 |
6-150,171-385 |
360 |
e1bg1A3 |
1BG1 |
603.2.1 |
0.884 |
0.0 |
0.0 |
6.6|6.6|1 |
0.922 |
2.034 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
12 |
0 |
no |
yes:6 |
PF03268 |
Q8IFZ2 |
17-368 |
nD1 |
11-310,326-380 |
355 |
e1bg1A3 |
1BG1 |
603.2.1 |
0.886 |
0.0 |
0.0 |
6.5|6.6|1 |
0.909 |
2.006 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
12 |
0 |
no |
yes:6 |
PF03272 |
A0A2A7GDJ4 |
1-113 |
nD1 |
1-115 |
115 |
e6s6zD4 |
6S6Z |
11.1.1 |
0.887 |
0.0 |
0.645 |
4.3|4.6|0 |
0.849 |
1.065 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
10 |
no |
no |
PF03272 |
A0A2A2NYC4 |
1-111 |
nD1 |
1-115 |
115 |
e4g5aA1 |
4G5A |
11.1.1 |
0.899 |
0.0 |
0.462 |
4.1|4.7|0 |
0.881 |
1.065 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
10 |
no |
no |
PF03272 |
A0A2A7GB84 |
1-114 |
nD1 |
1-119 |
119 |
e6s6zD4 |
6S6Z |
11.1.1 |
0.943 |
0.0 |
0.722 |
4.6|4.6|1 |
0.89 |
1.102 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
10 |
no |
no |
PF03299 |
A7S318 |
9-202 |
nD2 |
86-204 |
119 |
e5csdD1 |
5CSD |
622.1.1 |
0.896 |
0.0 |
0.0 |
5.7|5.7|1 |
0.884 |
1.352 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
5 |
0 |
no |
no |
PF03302 |
V6TEK2 |
210-608 |
nD3 |
486-560 |
75 |
e3u3qA6 |
3U3Q |
389.1.3 |
0.91 |
0.835 |
0.302 |
0.0|3.1|0 |
0.786 |
1.389 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
TNF receptor-like |
0 |
8 |
yes:out |
yes:out |
PF03312 |
A0A2G5UN77 |
23-150 |
nD2 |
76-154 |
79 |
e6rm3SX01 |
6RM3 |
2.1.1 |
0.934 |
0.0 |
0.0 |
4.2|5.0|0 |
0.826 |
0.76 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
6 |
no |
no |
PF03317 |
A0A3B6JIP2 |
1-105 |
nD1 |
1-85 |
85 |
e7aqrW1 |
7AQR |
1128.1.1 |
0.892 |
0.0 |
0.0 |
5.9|5.9|1 |
0.724 |
0.854 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
3 |
0 |
no |
no |
PF03385 |
G0NE30 |
155-525 |
nD2 |
138-265 |
128 |
e7jily1 |
7JIL |
604.9.1 |
0.884 |
0.0 |
0.0 |
4.4|4.8|1 |
0.885 |
1.488 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
5 |
0 |
yes:out |
no |
PF03409 |
E3N5W2 |
36-401 |
nD1 |
16-115 |
100 |
e4fxkB3 |
4FXK |
10.4.1 |
0.934 |
0.0 |
0.0 |
5.6|6.2|1 |
0.612 |
0.862 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
2 |
8 |
yes:in |
yes:out |
PF03409 |
E3N5W2 |
36-401 |
nD2 |
116-235 |
120 |
e7b01A2 |
7B01 |
10.4.1 |
0.877 |
0.0 |
0.0 |
6.9|7.7|1 |
0.838 |
1.034 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
0 |
10 |
yes:out |
yes:out |
PF03409 |
E3N5W2 |
36-401 |
nD3 |
236-355 |
120 |
e7rrmA1 |
7RRM |
10.1.2 |
0.896 |
0.0 |
0.0 |
7.5|7.8|0 |
0.881 |
0.764 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
9 |
yes:out |
yes:out |
PF03409 |
E3LKI7 |
41-389 |
nD2 |
126-240 |
115 |
e2qqkA3 |
2QQK |
10.4.1 |
0.88 |
0.0 |
0.0 |
6.0|7.1|1 |
0.826 |
0.991 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
0 |
9 |
yes:out |
no |
PF03409 |
E3N5V8 |
35-404 |
nD1 |
16-110 |
95 |
e5fwsA2 |
5FWS |
10.4.1 |
0.892 |
0.0 |
0.0 |
4.6|4.8|1 |
0.7 |
0.819 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
3 |
7 |
yes:out |
no |
PF03409 |
E3N5V8 |
35-404 |
nD3 |
246-355 |
110 |
e7b01A2 |
7B01 |
10.4.1 |
0.945 |
0.0 |
0.0 |
7.3|8.7|1 |
0.932 |
0.948 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
1 |
9 |
yes:out |
no |
PF03434 |
Q9R331 |
1-290 |
nD2 |
86-180 |
95 |
e6vd9A1 |
6VD9 |
327.7.1 |
0.865 |
0.0 |
0.0 |
6.2|6.2|1 |
0.915 |
1.131 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
3 |
5 |
no |
no |
PF03434 |
A0A1L4DGQ4 |
1-290 |
nD2 |
86-180 |
95 |
e6vd9A1 |
6VD9 |
327.7.1 |
0.866 |
0.0 |
0.0 |
6.0|6.0|1 |
0.915 |
1.131 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
3 |
5 |
no |
no |
PF03596 |
Q9JXN6 |
16-206 |
nD1 |
6-208 |
203 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.927 |
0.97 |
0.977 |
4.9|6.6|0 |
0.554 |
0.981 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
8 |
0 |
no |
yes:6 |
PF03612 |
D1AFP7 |
5-184 |
nD1 |
1-120 |
120 |
e4n03A3 |
4N03 |
2007.1.2 |
0.86 |
0.0 |
0.0 |
5.4|5.4|1 |
0.764 |
0.839 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Periplasmic binding protein-like I |
4 |
7 |
no |
yes:out |
PF03612 |
C9ABJ7 |
5-184 |
nD1 |
1-125 |
125 |
e3lufB2 |
3LUF |
2007.1.3 |
0.888 |
0.0 |
0.0 |
5.9|5.9|1 |
0.815 |
0.98 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
5 |
7 |
no |
yes:out |
PF03612 |
C9ACL7 |
4-194 |
nD1 |
1-120 |
120 |
e3lufB2 |
3LUF |
2007.1.3 |
0.865 |
0.0 |
0.0 |
5.0|5.0|1 |
0.805 |
0.941 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
4 |
7 |
no |
yes:out |
PF03650 |
G7XL34 |
49-155 |
nD1 |
51-140 |
90 |
e4rngC1 |
4RNG |
6155.1.1 |
0.948 |
0.415 |
0.304 |
9.0|9.7|1 |
0.929 |
1.029 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TOG superfamily |
SWEET transporter |
SWEET transporter |
3 |
0 |
no |
yes:1 |
PF03653 |
A0A085F1Z7 |
1-141 |
nD1 |
1-140 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.93 |
0.0 |
0.0 |
11.7|11.7|1 |
0.922 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF03653 |
A0A0Q9IA92 |
2-144 |
nD1 |
6-144 |
139 |
e6egcA1 |
6EGC |
192.29.1 |
0.928 |
0.0 |
0.0 |
11.2|11.2|1 |
0.914 |
1.829 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF03653 |
A0A1E1V102 |
2-141 |
nD1 |
1-140 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.93 |
0.0 |
0.0 |
11.6|11.6|1 |
0.922 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF03659 |
A0A165Q482 |
2-375 |
nD2 |
296-403 |
108 |
e7kgzB3 |
7KGZ |
11.1.1 |
0.942 |
0.0 |
0.588 |
4.5|6.5|1 |
0.877 |
1.0 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
8 |
no |
no |
PF03659 |
A0A5C3N366 |
2-379 |
nD2 |
286-403 |
118 |
e5ow3C2 |
5OW3 |
11.1.1 |
0.948 |
0.0 |
0.54 |
4.7|4.9|1 |
0.871 |
1.093 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
8 |
no |
no |
PF03673 |
O66958 |
11-229 |
nD2 |
6-20,116-229 |
129 |
e2ebbA1 |
2EBB |
305.2.1 |
0.901 |
0.0 |
0.0 |
5.0|5.0|1 |
0.851 |
1.33 |
pymol |
more |
good_domain |
a+b two layers |
DCoH-like |
Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
5 |
6 |
no |
no |
PF03676 |
K0KW02 |
57-465 |
nD1 |
46-219 |
174 |
e3d4eA3 |
3D4E |
809.1.1 |
0.925 |
0.0 |
0.0 |
4.9|4.9|1 |
0.91 |
2.084 |
pymol |
na |
good_domain |
a+b two layers |
BLIP-like |
beta-lactamase-inhibitor protein, BLIP |
beta-lactamase-inhibitor protein, BLIP |
5 |
12 |
no |
no |
PF03677 |
A0A6M2ACE2 |
1-241 |
nD1 |
36-195,206-240 |
195 |
e5ze9C2 |
5ZE9 |
160.1.1 |
0.873 |
0.0 |
0.0 |
4.4|4.6|1 |
0.765 |
1.5 |
pymol |
more |
good_domain |
alpha superhelices |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
10 |
0 |
no |
no |
PF03683 |
D3SWF8 |
6-79 |
nD1 |
1-75 |
75 |
e2v9vA1 |
2V9V |
101.1.2 |
0.939 |
0.0 |
0.945 |
4.1|4.1|1 |
0.848 |
0.789 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
0 |
no |
no |
PF03684 |
K2R5G2 |
1-140 |
nD1 |
1-75 |
75 |
e3iuwB1 |
3IUW |
1.1.9 |
0.9 |
0.0 |
0.0 |
3.2|3.3|0 |
0.797 |
0.543 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
2 |
4 |
no |
no |
PF03690 |
A4H5R5 |
44-394 |
nD2 |
266-395 |
130 |
e5xsiA1 |
5XSI |
5104.1.1 |
0.934 |
0.608 |
0.0 |
5.4|5.9|1 |
0.779 |
1.074 |
pymol |
more |
good_domain |
a+b three layers |
C-terminal domain in DHH phosphoesterases |
C-terminal domain in DHH phosphoesterases |
C-terminal domain in DHH phosphoesterases |
4 |
6 |
no |
no |
PF03690 |
A0A2P6U468 |
4-322 |
nD2 |
191-325 |
135 |
e1ir6A1 |
1IR6 |
5104.1.1 |
0.876 |
0.261 |
0.0 |
4.4|5.9|1 |
0.827 |
1.116 |
pymol |
more |
good_domain |
a+b three layers |
C-terminal domain in DHH phosphoesterases |
C-terminal domain in DHH phosphoesterases |
C-terminal domain in DHH phosphoesterases |
4 |
6 |
no |
no |
PF03694 |
C1GYV2 |
14-121 |
nD1 |
6-133 |
128 |
e5tcxA2 |
5TCX |
174.1.1 |
0.865 |
0.0 |
0.0 |
9.9|9.9|1 |
0.887 |
0.877 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
yes:in |
yes:3 |
PF03694 |
A0A2B7ZRU8 |
14-122 |
nD1 |
6-133 |
128 |
e5tcxA2 |
5TCX |
174.1.1 |
0.863 |
0.0 |
0.0 |
9.7|9.7|1 |
0.887 |
0.877 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
1 |
no |
yes:4 |
PF03698 |
Q5L144 |
2-78 |
nD1 |
1-80 |
80 |
e4b09G3 |
4B09 |
2007.1.3 |
0.92 |
0.0 |
0.79 |
9.0|9.1|1 |
0.825 |
0.627 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
3 |
4 |
no |
no |
PF03698 |
I7LHI4 |
3-77 |
nD1 |
1-80 |
80 |
e1yt5B2 |
1YT5 |
2007.1.4 |
0.866 |
0.559 |
0.656 |
6.7|7.5|0 |
0.788 |
0.4 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Phosphofructokinase N-terminal domain |
4 |
4 |
no |
no |
PF03698 |
A0A1G5HTJ3 |
3-81 |
nD1 |
1-80 |
80 |
e4b09G3 |
4B09 |
2007.1.3 |
0.933 |
0.0 |
0.809 |
7.6|7.6|1 |
0.797 |
0.627 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
2 |
4 |
no |
no |
PF03752 |
A0A3R8RFN9 |
29-66 |
nD1 |
6-90 |
85 |
e5wahA1 |
5WAH |
632.2.1 |
0.931 |
0.0 |
0.0 |
5.6|6.3|0 |
0.912 |
1.405 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
4 |
0 |
no |
no |
PF03768 |
A0A1I8M787 |
4-66 |
nD1 |
1-189 |
189 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.882 |
0.93 |
0.862 |
14.3|16.1|0 |
0.707 |
0.514 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
11 |
no |
no |
PF03768 |
Q9VEH5 |
1-65 |
nD1 |
1-180 |
180 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.867 |
0.9 |
0.917 |
13.8|13.8|1 |
0.698 |
0.489 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
11 |
no |
no |
PF03769 |
A0A1I8M787 |
73-189 |
nD1 |
1-189 |
189 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.882 |
0.93 |
0.862 |
14.3|16.1|0 |
0.707 |
0.514 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
11 |
no |
no |
PF03769 |
Q9VEH5 |
67-181 |
nD1 |
1-180 |
180 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.867 |
0.9 |
0.917 |
13.8|13.8|1 |
0.698 |
0.489 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
11 |
no |
no |
PF03778 |
Q9LNR8 |
302-323 |
nD1 |
11-325 |
315 |
e3p4gB1 |
3P4G |
207.6.1 |
0.936 |
0.0 |
0.0 |
16.7|16.7|1 |
0.859 |
1.74 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
0 |
26 |
no |
no |
PF03778 |
A0A0D3CIH0 |
9-30 |
nD1 |
1-25,61-178 |
143 |
e3p4gB1 |
3P4G |
207.6.1 |
0.871 |
0.0 |
0.0 |
12.6|12.6|1 |
0.653 |
0.79 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
1 |
2 |
no |
no |
PF03790 |
M1BJC7 |
50-92 |
nD1 |
51-155 |
105 |
e4d7xA1 |
4D7X |
103.4.1 |
0.917 |
0.0 |
0.0 |
4.5|4.5|1 |
0.811 |
1.082 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
no |
PF03791 |
M1BJC7 |
107-154 |
nD1 |
51-155 |
105 |
e4d7xA1 |
4D7X |
103.4.1 |
0.917 |
0.0 |
0.0 |
4.5|4.5|1 |
0.811 |
1.082 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
no |
PF03798 |
A0A1R3HFH6 |
26-215 |
nD1 |
1-225 |
225 |
e5tj6A1 |
5TJ6 |
5054.1.1 |
0.852 |
0.0 |
0.0 |
6.9|7.2|0 |
0.642 |
0.987 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
6 |
1 |
no |
yes:5 |
PF03798 |
A0A1L0BPU2 |
60-263 |
nD1 |
11-274 |
264 |
e3l39A1 |
3L39 |
604.5.1 |
0.942 |
0.0 |
0.0 |
7.0|7.0|1 |
0.838 |
2.444 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
7 |
1 |
no |
yes:6 |
PF03803 |
Q9NRQ2 |
100-322 |
nD1 |
117-320 |
204 |
e2q4mA1 |
2Q4M |
844.1.1 |
0.892 |
0.998 |
0.994 |
9.9|10.1|1 |
0.893 |
0.899 |
pymol |
more |
good_domain |
beta barrels |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
3 |
12 |
no |
yes:1 |
PF03803 |
Q9VZW1 |
42-263 |
nD1 |
42-260 |
219 |
e2q4mA1 |
2Q4M |
844.1.1 |
0.857 |
0.998 |
0.995 |
11.3|11.3|1 |
0.896 |
0.965 |
pymol |
more |
good_domain |
beta barrels |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
3 |
12 |
no |
yes:1 |
PF03803 |
P47140 |
59-310 |
nD1 |
66-305 |
240 |
e2q4mA1 |
2Q4M |
844.1.1 |
0.859 |
0.998 |
0.994 |
9.3|11.1|1 |
0.912 |
1.057 |
pymol |
more |
good_domain |
beta barrels |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
4 |
12 |
no |
no |
PF03817 |
A0A258DYZ0 |
2-113 |
nD1 |
1-110 |
110 |
e7blzK1 |
7BLZ |
5063.1.1 |
0.944 |
0.0 |
0.0 |
6.1|6.1|1 |
0.942 |
1.41 |
pymol |
more |
good_domain |
alpha bundles |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
5 |
0 |
yes:in |
yes:3 |
PF03817 |
A3HS46 |
1-115 |
nD1 |
1-90 |
90 |
e7blzK1 |
7BLZ |
5063.1.1 |
0.941 |
0.0 |
0.0 |
5.7|5.7|1 |
0.942 |
1.154 |
pymol |
more |
good_domain |
alpha bundles |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
4 |
0 |
yes:in |
yes:2 |
PF03817 |
A0A326RR39 |
2-114 |
nD1 |
1-115 |
115 |
e7blzK1 |
7BLZ |
5063.1.1 |
0.941 |
0.0 |
0.0 |
5.8|5.8|1 |
0.942 |
1.474 |
pymol |
more |
good_domain |
alpha bundles |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
4 |
0 |
yes:in |
yes:3 |
PF03824 |
Q92LY4 |
78-342 |
nD3 |
81-180,241-344 |
204 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.878 |
0.991 |
0.992 |
6.3|9.0|0 |
0.779 |
0.986 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
8 |
0 |
yes:out |
yes:6 |
PF03856 |
G0S667 |
55-301 |
nD2 |
141-315 |
175 |
e5fidA1 |
5FID |
11.8.1 |
0.921 |
0.0 |
0.07 |
9.6|9.6|1 |
0.94 |
1.148 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Osmotin-like |
Osmotin-like |
2 |
10 |
yes:out |
no |
PF03856 |
Q758R5 |
30-283 |
nD2 |
116-300 |
185 |
e3g7mA1 |
3G7M |
11.8.1 |
0.889 |
0.0 |
0.089 |
10.0|10.0|1 |
0.913 |
1.213 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Osmotin-like |
Osmotin-like |
2 |
11 |
yes:out |
no |
PF03857 |
G8EB00 |
41-178 |
nD1 |
11-90,106-170 |
145 |
e3r6nA3 |
3R6N |
604.1.1 |
0.866 |
0.0 |
0.0 |
4.5|5.5|0 |
0.79 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
7 |
0 |
no |
yes:4 |
PF03956 |
R6FJ98 |
126-320 |
nD1 |
1-55,61-90,116-320 |
290 |
e6lgvA1 |
6LGV |
3236.1.1 |
0.941 |
0.791 |
0.918 |
12.3|12.9|1 |
0.399 |
0.755 |
pymol |
more |
good_domain |
alpha complex topology |
Cation-proton antiporter |
Cation-proton antiporter (CPA) |
Cation-proton antiporter (CPA) |
11 |
0 |
no |
yes:8 |
PF03961 |
A0Y6U6 |
260-537 |
nD4 |
261-400 |
140 |
e3p4gB1 |
3P4G |
207.6.1 |
0.866 |
0.0 |
0.0 |
14.5|14.5|1 |
0.625 |
0.773 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
0 |
14 |
no |
no |
PF03988 |
A0A1H6ZJY7 |
16-67 |
nD1 |
6-245 |
240 |
e6kkkB1 |
6KKK |
5050.1.1 |
0.908 |
0.316 |
0.0 |
5.2|6.9|1 |
0.628 |
1.088 |
pymol |
more |
good_domain |
alpha complex topology |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
8 |
1 |
yes:in |
yes:7 |
PF03993 |
R6WNN1 |
428-500 |
nD6 |
451-520 |
70 |
e5t76A1 |
5T76 |
1134.1.1 |
0.906 |
0.0 |
0.0 |
7.4|7.7|0 |
0.922 |
0.946 |
pymol |
more |
good_domain |
alpha bundles |
C-terminal helical domain of alanine-tRNA ligase |
C-terminal helical domain of alanine-tRNA ligase |
Eukaryotic C-Ala helical domain |
3 |
0 |
no |
no |
PF03993 |
A0A0A2DMI8 |
66-136 |
nD2 |
91-160 |
70 |
e5t76A1 |
5T76 |
1134.1.1 |
0.931 |
0.0 |
0.0 |
7.8|7.8|1 |
0.862 |
0.946 |
pymol |
more |
good_domain |
alpha bundles |
C-terminal helical domain of alanine-tRNA ligase |
C-terminal helical domain of alanine-tRNA ligase |
Eukaryotic C-Ala helical domain |
3 |
0 |
no |
no |
PF04001 |
A0A1X7QY95 |
14-100 |
nD1 |
11-105 |
95 |
e1pufA1 |
1PUF |
101.1.1 |
0.888 |
0.0 |
0.0 |
4.8|6.2|0 |
0.937 |
1.301 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF04018 |
A0A382PMI1 |
15-237 |
nD1 |
6-240 |
235 |
e6cb2A1 |
6CB2 |
7014.1.1 |
0.946 |
0.717 |
0.654 |
5.9|5.9|1 |
0.643 |
1.741 |
pymol |
more |
good_domain |
alpha bundles |
Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain |
Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain |
Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain |
10 |
0 |
no |
yes:7 |
PF04020 |
A0A6I2ZE29 |
12-110 |
nD1 |
1-129 |
129 |
e6pajB2 |
6PAJ |
605.1.1 |
0.897 |
0.0 |
0.0 |
4.1|4.1|0 |
0.908 |
1.767 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
2 |
no |
yes:4 |
PF04024 |
A0A5P2EYT9 |
3-60 |
nD1 |
18-60 |
43 |
e4c3xA2 |
4C3X |
101.1.12 |
0.869 |
0.0 |
0.106 |
2.6|2.7|0 |
0.921 |
1.323 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
HTH motif inserted in other structures |
3 |
0 |
no |
yes:1 |
PF04024 |
A6M0S4 |
3-60 |
nD1 |
18-60 |
43 |
e4c3xA2 |
4C3X |
101.1.12 |
0.869 |
0.0 |
0.146 |
2.6|2.7|0 |
0.921 |
1.323 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
HTH motif inserted in other structures |
3 |
0 |
no |
yes:1 |
PF04087 |
A0A238Z4B8 |
147-287 |
nD2 |
96-300 |
205 |
e3tdpA1 |
3TDP |
5048.1.1 |
0.869 |
0.0 |
0.0 |
10.6|10.6|1 |
0.782 |
0.817 |
pymol |
more |
good_domain |
alpha complex topology |
Aquaporin-like |
Aquaporin-like |
Aquaporin-like |
10 |
0 |
no |
yes:6 |
PF04087 |
A0A1M6NZW9 |
147-288 |
nD2 |
96-300 |
205 |
e3tdpA1 |
3TDP |
5048.1.1 |
0.86 |
0.0 |
0.0 |
10.4|10.4|1 |
0.782 |
0.817 |
pymol |
more |
good_domain |
alpha complex topology |
Aquaporin-like |
Aquaporin-like |
Aquaporin-like |
10 |
0 |
no |
yes:6 |
PF04123 |
O28221 |
4-334 |
nD3 |
221-340 |
120 |
e5xa5A1 |
5XA5 |
601.1.1 |
0.902 |
0.0 |
0.0 |
7.2|7.2|1 |
0.892 |
0.916 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
4 |
0 |
no |
yes:4 |
PF04133 |
A0A5C6P184 |
557-670 |
nD5 |
561-670 |
110 |
e3lhpS1 |
3LHP |
310.2.1 |
0.862 |
0.0 |
0.0 |
6.6|7.5|1 |
0.744 |
0.598 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
5 |
0 |
no |
yes:4 |
PF04133 |
A0A4Z2C0M7 |
628-741 |
nD5 |
601-740 |
140 |
e5f5pA1 |
5F5P |
1203.1.2 |
0.939 |
0.0 |
0.0 |
6.6|7.3|0 |
0.705 |
0.773 |
pymol |
more |
good_domain |
alpha bundles |
Shroom domain 2 |
Shroom domain 2 |
Human SD2 |
5 |
0 |
no |
yes:4 |
PF04133 |
A0A6G1QA76 |
513-627 |
nD5 |
516-625 |
110 |
e5wp3B1 |
5WP3 |
310.2.1 |
0.888 |
0.0 |
0.0 |
6.4|6.4|1 |
0.834 |
0.598 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
5 |
0 |
no |
yes:4 |
PF04136 |
G0V644 |
80-226 |
nD2 |
111-450,466-580,636-760 |
580 |
e5k7vC2 |
5K7V |
601.1.1 |
0.851 |
0.0 |
0.0 |
9.1|14.4|0 |
0.662 |
4.427 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
18 |
0 |
no |
no |
PF04144 |
F4PCB0 |
104-278 |
nD2 |
121-280 |
160 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.938 |
0.0 |
0.0 |
8.6|11.6|0 |
0.971 |
0.97 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
yes:4 |
PF04144 |
I7LW66 |
26-190 |
nD1 |
11-205 |
195 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.895 |
0.0 |
0.0 |
9.7|12.1|0 |
0.956 |
1.182 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
1 |
no |
yes:4 |
PF04144 |
A0A453B9X6 |
8-179 |
nD1 |
11-180 |
170 |
e1r0dI1 |
1R0D |
601.1.2 |
0.891 |
0.0 |
0.0 |
9.9|10.9|0 |
0.914 |
1.03 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
yes:4 |
PF04148 |
A1CE29 |
1-215 |
nD1 |
6-170 |
165 |
e6wvdA2 |
6WVD |
174.1.1 |
0.877 |
0.0 |
0.0 |
8.1|8.1|1 |
0.792 |
1.13 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF04148 |
Q6BVG3 |
1-194 |
nD2 |
36-115,136-160 |
105 |
e6wvdA2 |
6WVD |
174.1.1 |
0.931 |
0.0 |
0.0 |
8.2|8.2|1 |
0.699 |
0.719 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF04149 |
F4FGS3 |
6-57 |
nD1 |
6-60 |
55 |
e5a4oB1 |
5A4O |
295.1.1 |
0.921 |
0.378 |
0.297 |
4.3|4.3|1 |
0.785 |
0.451 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
1 |
3 |
no |
no |
PF04168 |
B0C6M3 |
1-312 |
nD1 |
1-315 |
315 |
e6m31B1 |
6M31 |
141.1.1 |
0.921 |
0.0 |
0.0 |
7.9|7.9|1 |
0.504 |
1.006 |
pymol |
na |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
15 |
0 |
no |
no |
PF04168 |
Q8DJQ5 |
7-317 |
nD2 |
161-315 |
155 |
e7jrqA1 |
7JRQ |
3684.1.1 |
0.927 |
0.0 |
0.0 |
8.1|8.1|1 |
0.862 |
1.23 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
7 |
0 |
no |
no |
PF04178 |
A0A1Z5T6B9 |
755-849 |
nD2 |
756-845 |
90 |
e6btmF1 |
6BTM |
5069.1.1 |
0.859 |
0.0 |
0.0 |
4.3|4.3|1 |
0.744 |
0.425 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:3 |
PF04182 |
Q6Z849 |
110-195 |
nD1 |
1-100,106-235,241-425 |
415 |
e3tgnB1 |
3TGN |
101.1.2 |
0.916 |
0.921 |
0.973 |
6.4|10.2|1 |
0.752 |
4.368 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
14 |
13 |
no |
yes:2 |
PF04219 |
Q2SM44 |
11-99 |
nD1 |
22-85 |
64 |
e2jmwA1 |
2JMW |
101.1.1 |
0.895 |
0.0 |
0.883 |
2.1|2.1|1 |
0.705 |
0.877 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF04224 |
A0A0J0YFQ6 |
3-138 |
nD1 |
6-139 |
134 |
e5tcxA2 |
5TCX |
174.1.1 |
0.852 |
0.0 |
0.0 |
7.7|8.2|1 |
0.868 |
0.918 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
2 |
no |
yes:3 |
PF04226 |
A0A4Y1W6V9 |
31-76 |
nD1 |
1-75 |
75 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.9 |
0.0 |
0.0 |
5.8|5.8|1 |
0.863 |
0.785 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
3 |
1 |
yes:in |
yes:1 |
PF04233 |
Q72D12 |
59-168 |
nD1 |
16-110 |
95 |
e5dcqD1 |
5DCQ |
3678.1.1 |
0.907 |
0.0 |
0.0 |
4.3|4.3|1 |
0.778 |
0.95 |
pymol |
more |
good_domain |
alpha arrays |
Pilus-presented adhesin helical insertion domain |
Pilus-presented adhesin helical insertion domain |
Pilus-presented adhesin helical insertion domain |
5 |
0 |
no |
no |
PF04238 |
A0A1W1C762 |
18-156 |
nD1 |
1-159 |
159 |
e6egcA1 |
6EGC |
192.29.1 |
0.933 |
0.0 |
0.0 |
12.8|12.8|0 |
0.953 |
2.092 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
1 |
no |
yes:4 |
PF04238 |
A0A432SB60 |
18-156 |
nD1 |
1-159 |
159 |
e6egcA1 |
6EGC |
192.29.1 |
0.933 |
0.0 |
0.0 |
12.9|12.9|1 |
0.953 |
2.092 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
1 |
no |
yes:4 |
PF04238 |
A0A2G2CTT6 |
18-156 |
nD1 |
1-159 |
159 |
e6egcA1 |
6EGC |
192.29.1 |
0.933 |
0.0 |
0.0 |
12.8|12.8|0 |
0.953 |
2.092 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
1 |
no |
yes:4 |
PF04247 |
G2J055 |
4-121 |
nD1 |
6-120 |
115 |
e6rkoA2 |
6RKO |
5069.1.1 |
0.932 |
0.517 |
0.713 |
10.2|12.4|0 |
0.758 |
0.542 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:4 |
PF04247 |
A0A7S7AJ55 |
5-126 |
nD1 |
6-125 |
120 |
e6rkoA2 |
6RKO |
5069.1.1 |
0.916 |
0.272 |
0.639 |
10.3|12.9|0 |
0.78 |
0.566 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:4 |
PF04298 |
A0A3A6PEY1 |
2-216 |
nD1 |
1-215 |
215 |
e3dteA1 |
3DTE |
2498.1.1 |
0.925 |
0.917 |
0.977 |
5.4|6.1|0 |
0.723 |
0.857 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
7 |
4 |
yes:in |
yes:3 |
PF04298 |
A0A3A1V2R0 |
1-216 |
nD1 |
1-220 |
220 |
e3dteA1 |
3DTE |
2498.1.1 |
0.859 |
0.902 |
0.978 |
5.4|6.4|0 |
0.723 |
0.876 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
7 |
4 |
yes:in |
yes:3 |
PF04298 |
A0A1H2QZ80 |
7-221 |
nD1 |
1-220 |
220 |
e3l39A1 |
3L39 |
604.5.1 |
0.885 |
0.0 |
0.0 |
7.0|7.0|1 |
0.582 |
2.037 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
7 |
4 |
no |
yes:4 |
PF04320 |
A0A0H3H2V9 |
7-107 |
nD1 |
11-105 |
95 |
e5xanB2 |
5XAN |
304.28.1 |
0.891 |
0.0 |
0.0 |
7.1|8.9|0 |
0.953 |
0.913 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ferredoxin domains in multidrug efflux transporter |
Multidrug efflux transporter AcrB pore domain |
2 |
4 |
no |
no |
PF04320 |
P38521 |
7-107 |
nD1 |
11-105 |
95 |
e5xanB2 |
5XAN |
304.28.1 |
0.891 |
0.0 |
0.0 |
7.1|9.0|0 |
0.953 |
0.913 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ferredoxin domains in multidrug efflux transporter |
Multidrug efflux transporter AcrB pore domain |
2 |
4 |
no |
no |
PF04328 |
A0A2A4E635 |
19-77 |
nD1 |
6-65 |
60 |
e2mxdA1 |
2MXD |
3639.1.1 |
0.907 |
0.531 |
0.548 |
0.0|2.6|0 |
0.435 |
0.876 |
pymol |
more |
good_domain |
alpha arrays |
Virus VPg protein |
Virus VPg protein |
Virus VPg protein |
3 |
0 |
no |
no |
PF04338 |
A1WUX8 |
30-239 |
nD1 |
26-239 |
214 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.863 |
0.992 |
0.992 |
15.6|17.6|0 |
0.856 |
0.582 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
11 |
yes:out |
no |
PF04361 |
A0A1J5T7V2 |
1-151 |
nD2 |
51-145 |
95 |
e2kruA1 |
2KRU |
148.1.3 |
0.923 |
0.0 |
0.632 |
3.6|6.9|0 |
1.0 |
1.022 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
2 |
no |
no |
PF04361 |
A0A1G0EG98 |
1-151 |
nD2 |
51-140 |
90 |
e6vmtA1 |
6VMT |
103.7.1 |
0.923 |
0.684 |
0.76 |
7.9|7.9|1 |
0.88 |
0.957 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Hypothetical protein MTH1615 |
Hypothetical protein MTH1615 |
4 |
2 |
no |
no |
PF04368 |
A6Q5H1 |
1-184 |
nD1 |
1-155 |
155 |
e3kdwA1 |
3KDW |
3711.1.1 |
0.91 |
0.0 |
0.0 |
5.1|5.1|1 |
0.53 |
1.396 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
5 |
2 |
no |
no |
PF04375 |
Q6CZG1 |
128-363 |
nD3 |
131-195,341-370 |
95 |
e2w2uA2 |
2W2U |
604.12.1 |
0.861 |
0.0 |
0.0 |
9.7|9.8|1 |
0.872 |
1.098 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
0 |
no |
yes:out |
PF04387 |
A0A317X1Q9 |
49-197 |
nD1 |
6-195 |
190 |
e5tj6A1 |
5TJ6 |
5054.1.1 |
0.906 |
0.0 |
0.0 |
7.4|7.4|1 |
0.565 |
0.833 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
6 |
0 |
no |
yes:4 |
PF04387 |
A0A5N6TJA6 |
50-198 |
nD1 |
6-195 |
190 |
e5tj6A1 |
5TJ6 |
5054.1.1 |
0.866 |
0.0 |
0.0 |
7.0|7.1|0 |
0.601 |
0.833 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
6 |
0 |
no |
yes:4 |
PF04393 |
A0KEN3 |
11-283 |
nD1 |
16-290 |
275 |
e5l7jA2 |
5L7J |
213.1.1 |
0.925 |
0.0 |
0.0 |
7.2|8.8|1 |
0.917 |
1.672 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
9 |
7 |
no |
no |
PF04393 |
P75829 |
47-326 |
nD2 |
111-330 |
220 |
e5l7jA2 |
5L7J |
213.1.1 |
0.949 |
0.0 |
0.0 |
7.3|8.6|1 |
0.923 |
1.337 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
7 |
7 |
no |
no |
PF04393 |
Q9KSE0 |
25-294 |
nD2 |
66-300 |
235 |
e5l7jA2 |
5L7J |
213.1.1 |
0.946 |
0.0 |
0.0 |
6.9|7.9|1 |
0.914 |
1.429 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
7 |
8 |
no |
no |
PF04403 |
D3VC06 |
50-202 |
nD2 |
46-203 |
158 |
e5vouF1 |
5VOU |
633.23.1 |
0.88 |
0.0 |
0.0 |
8.8|8.8|1 |
0.802 |
0.845 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Claudin |
Claudin |
7 |
3 |
no |
yes:4 |
PF04403 |
A0A0F5EZE4 |
53-204 |
nD2 |
51-205 |
155 |
e2jswA1 |
2JSW |
601.1.2 |
0.882 |
0.0 |
0.0 |
5.1|8.1|0 |
0.76 |
0.939 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
7 |
3 |
no |
yes:4 |
PF04404 |
Q1MRY8 |
63-206 |
nD1 |
51-175 |
125 |
e1h2iO1 |
1H2I |
330.1.1 |
0.944 |
0.0 |
0.0 |
6.2|6.2|1 |
0.794 |
1.553 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
dsRNA-binding domain-like |
dsRNA-binding domain-like |
4 |
3 |
no |
no |
PF04409 |
Q2NI37 |
2-534 |
nD1 |
216-275 |
60 |
e4v6uBl1 |
4V6U |
3115.1.1 |
0.856 |
0.0 |
0.0 |
5.2|5.2|1 |
0.786 |
0.769 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF04409 |
D3E2Q0 |
1-524 |
nD1 |
126-160 |
35 |
e5fmfR2 |
5FMF |
375.1.1 |
0.894 |
0.917 |
0.936 |
0.0|4.7|0 |
0.69 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
3 |
no |
no |
PF04409 |
D3E2Q0 |
1-524 |
nD2 |
6-125,161-205,266-295,376-455 |
275 |
e1uurA3 |
1UUR |
603.2.1 |
0.914 |
0.0 |
0.0 |
8.2|8.2|1 |
0.78 |
1.554 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
12 |
3 |
no |
no |
PF04415 |
Q5JEM8 |
28-479 |
nD3 |
146-285 |
140 |
e4kjmB2 |
4KJM |
632.2.1 |
0.915 |
0.0 |
0.519 |
7.1|7.2|0 |
0.954 |
2.314 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
6 |
3 |
no |
yes:out |
PF04458 |
A0A402ASD3 |
1-631 |
nD3 |
151-290 |
140 |
e1b9mA3 |
1B9M |
101.1.2 |
0.924 |
0.0 |
0.795 |
5.5|5.6|1 |
0.77 |
1.474 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
6 |
5 |
no |
no |
PF04458 |
A0A0U3FS66 |
1-582 |
nD2 |
81-135 |
55 |
e7pq2AAA2 |
7PQ2 |
101.1.2 |
0.948 |
0.0 |
0.376 |
6.0|7.0|1 |
0.788 |
0.579 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF04459 |
F6DT44 |
223-426 |
nD3 |
296-435 |
140 |
e7cgpB2 |
7CGP |
2007.1.4 |
0.871 |
0.0 |
0.0 |
5.7|6.4|0 |
0.81 |
0.7 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Phosphofructokinase N-terminal domain |
6 |
5 |
no |
no |
PF04459 |
Q46HS4 |
234-437 |
nD3 |
321-445 |
125 |
e3zk8A1 |
3ZK8 |
2007.1.14 |
0.902 |
0.0 |
0.0 |
4.4|4.5|0 |
0.791 |
0.868 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Chelatase-like |
5 |
5 |
no |
no |
PF04468 |
A0A7C5REM0 |
53-134 |
nD1 |
1-165 |
165 |
e6rwxU3 |
6RWX |
327.13.1 |
0.861 |
0.0 |
0.0 |
7.9|7.9|1 |
0.925 |
1.618 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif I in type III secretion system |
Ring-building motif I in type III secretion system |
3 |
8 |
no |
no |
PF04468 |
G8N912 |
53-134 |
nD2 |
56-160 |
105 |
e3byrA1 |
3BYR |
327.7.1 |
0.862 |
0.0 |
0.0 |
7.8|7.8|0 |
0.867 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
3 |
3 |
no |
no |
PF04468 |
A0A510I048 |
53-134 |
nD2 |
56-165 |
110 |
e2dyjA1 |
2DYJ |
327.10.1 |
0.875 |
0.511 |
0.448 |
8.7|8.7|1 |
0.809 |
1.095 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ribosome-binding factor A (RbfA)-related |
Ribosome-binding factor A (RbfA)-related |
3 |
3 |
no |
no |
PF04531 |
A0A1B9AL93 |
2-90 |
nD1 |
16-69 |
54 |
e3jcfC2 |
3JCF |
5042.1.1 |
0.854 |
0.176 |
0.0 |
2.8|2.8|1 |
0.627 |
0.818 |
pymol |
more |
good_domain |
extended segments |
Magnesium transport protein CorA, transmembrane region |
Magnesium transport protein CorA, transmembrane region |
Magnesium transport protein CorA, transmembrane region |
3 |
0 |
no |
yes:2 |
PF04535 |
Q9SKN3 |
34-164 |
nD1 |
31-179 |
149 |
e5armA1 |
5ARM |
633.21.1 |
0.943 |
0.0 |
0.0 |
11.0|11.0|1 |
0.972 |
1.38 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
4 |
0 |
no |
yes:4 |
PF04535 |
A7PJ32 |
3-143 |
nD1 |
6-155 |
150 |
e5vouF1 |
5VOU |
633.23.1 |
0.945 |
0.143 |
0.132 |
11.6|12.6|1 |
0.787 |
0.802 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Claudin |
Claudin |
4 |
3 |
no |
yes:4 |
PF04562 |
D3B7S4 |
29-143 |
nD1 |
36-100 |
65 |
e6z1pAE1 |
6Z1P |
375.1.1 |
0.905 |
0.0 |
0.0 |
2.0|2.0|1 |
0.814 |
1.161 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
5 |
no |
yes:out |
PF04570 |
B9T769 |
70-119 |
nD1 |
81-115 |
35 |
e2dasA1 |
2DAS |
377.1.1 |
0.925 |
0.557 |
0.953 |
0.0|0.0|0 |
0.612 |
0.7 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
no |
PF04570 |
M7YRP6 |
91-138 |
nD1 |
106-135 |
30 |
e6gv6A1 |
6GV6 |
931.1.1 |
0.855 |
0.466 |
0.45 |
0.0|0.0|0 |
0.535 |
0.75 |
pymol |
more |
good_domain |
few secondary structure elements |
Metallothionein |
Metallothionein |
Metallothionein |
1 |
2 |
no |
no |
PF04630 |
A0A1G6AJT2 |
1-198 |
nD1 |
1-195 |
195 |
e6raoF1 |
6RAO |
1.1.5 |
0.936 |
0.0 |
0.263 |
9.5|9.6|1 |
0.975 |
1.15 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel |
2 |
13 |
no |
no |
PF04632 |
Q6DAH4 |
19-661 |
nD3 |
516-660 |
145 |
e4xpwA1 |
4XPW |
601.14.1 |
0.854 |
0.0 |
0.0 |
8.2|8.2|1 |
0.628 |
0.942 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Hemerythrin |
Hemerythrin |
6 |
1 |
no |
yes:out |
PF04632 |
Q0K173 |
35-691 |
nD5 |
541-690 |
150 |
e6egcA1 |
6EGC |
192.29.1 |
0.907 |
0.0 |
0.0 |
6.0|6.0|1 |
0.749 |
1.974 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
yes:out |
PF04642 |
Q9M107 |
282-578 |
nD3 |
431-575 |
145 |
e4ll7A1 |
4LL7 |
3939.1.1 |
0.926 |
0.965 |
0.814 |
0.0|5.7|0 |
0.892 |
2.417 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
1 |
0 |
no |
no |
PF04645 |
Q9S073 |
1-181 |
nD1 |
6-55 |
50 |
e6amaY1 |
6AMA |
101.1.9 |
0.944 |
0.964 |
0.977 |
0.0|5.4|0 |
0.805 |
0.571 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
3 |
0 |
no |
no |
PF04645 |
Q9R382 |
1-181 |
nD1 |
6-55 |
50 |
e5cy2B1 |
5CY2 |
101.1.1 |
0.945 |
0.944 |
0.968 |
4.7|7.0|0 |
0.892 |
0.685 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF04646 |
A0A022PRE4 |
45-298 |
nD1 |
1-165,206-220 |
180 |
e6wmmA1 |
6WMM |
7516.1.1 |
0.943 |
0.992 |
0.994 |
6.8|11.2|1 |
0.37 |
0.679 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
5 |
8 |
no |
no |
PF04654 |
A0A7S9LVW0 |
16-222 |
nD1 |
1-225 |
225 |
e6egcA1 |
6EGC |
192.29.1 |
0.936 |
0.0 |
0.0 |
8.7|8.7|1 |
0.822 |
2.961 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
yes:4 |
PF04664 |
Q5K9J1 |
48-251 |
nD1 |
31-265 |
235 |
e5h78B1 |
5H78 |
109.3.1 |
0.886 |
0.0 |
0.0 |
6.7|6.7|1 |
0.819 |
1.181 |
pymol |
na |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
12 |
3 |
yes:out |
no |
PF04664 |
Q99PG2 |
78-282 |
nD1 |
56-270 |
215 |
e3woyA1 |
3WOY |
109.4.1 |
0.885 |
0.0 |
0.0 |
5.7|6.4|1 |
0.608 |
0.752 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
2 |
no |
no |
PF04664 |
Q9NZT2 |
88-292 |
nD1 |
66-290 |
225 |
e2jekA1 |
2JEK |
4240.1.1 |
0.944 |
0.402 |
0.404 |
6.4|6.4|1 |
0.793 |
1.607 |
pymol |
more |
good_domain |
alpha arrays |
Rv1873-like |
Rv1873-like |
Rv1873-like |
10 |
2 |
no |
no |
PF04668 |
P54356 |
85-207 |
nD2 |
91-119,151-189 |
68 |
e7c2pD1 |
7C2P |
387.1.5 |
0.921 |
0.0 |
0.093 |
2.7|3.0|1 |
0.875 |
1.545 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
Scorpion toxin-like |
2 |
5 |
yes:out |
no |
PF04668 |
A0A2A3EHB0 |
86-215 |
nD2 |
91-125,156-195 |
75 |
e4uj0A1 |
4UJ0 |
387.1.5 |
0.905 |
0.1 |
0.082 |
2.2|2.2|1 |
0.817 |
1.705 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
Scorpion toxin-like |
3 |
4 |
yes:out |
no |
PF04674 |
W1P6X2 |
40-321 |
nD1 |
41-320 |
280 |
e4axqA1 |
4AXQ |
2498.1.1 |
0.853 |
0.0 |
0.0 |
6.7|7.9|1 |
0.889 |
1.116 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
5 |
12 |
yes:out |
no |
PF04690 |
W1P736 |
16-193 |
nD1 |
21-60 |
40 |
e5xogM1 |
5XOG |
375.1.1 |
0.927 |
0.87 |
0.859 |
0.0|2.2|1 |
0.802 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF04698 |
A0A5F8HEP8 |
152-889 |
nD5 |
701-805 |
105 |
e4hwdD1 |
4HWD |
604.3.1 |
0.854 |
0.0 |
0.0 |
9.9|9.9|1 |
0.908 |
1.193 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
no |
no |
PF04709 |
G3S0U3 |
78-442 |
nD1 |
71-255 |
185 |
e4ycgB1 |
4YCG |
10.2.1 |
0.883 |
0.0 |
0.0 |
5.9|5.9|1 |
0.616 |
0.799 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
4 |
9 |
yes:out |
no |
PF04709 |
G3S0U3 |
78-442 |
nD2 |
286-305,371-440 |
90 |
e4nooB1 |
4NOO |
632.20.1 |
0.86 |
0.0 |
0.0 |
6.4|6.4|1 |
0.674 |
0.947 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
TsiV3 protein |
TsiV3 protein |
4 |
0 |
yes:out |
no |
PF04709 |
A1XPM9 |
35-387 |
nD1 |
31-215 |
185 |
e4ycgB1 |
4YCG |
10.2.1 |
0.886 |
0.0 |
0.0 |
7.1|7.1|1 |
0.646 |
0.799 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
4 |
9 |
yes:out |
no |
PF04709 |
A1XPM9 |
35-387 |
nD2 |
236-390 |
155 |
e6rjwA1 |
6RJW |
632.18.1 |
0.935 |
0.0 |
0.0 |
4.7|4.7|1 |
0.885 |
1.914 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
hypothetical protein PA2901 |
hypothetical protein PA2901 |
5 |
2 |
yes:out |
no |
PF04709 |
F6TR95 |
136-521 |
nD1 |
131-320 |
190 |
e4ycgB1 |
4YCG |
10.2.1 |
0.869 |
0.0 |
0.0 |
5.5|5.5|1 |
0.621 |
0.821 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
4 |
9 |
yes:out |
no |
PF04720 |
Q9SIU5 |
20-247 |
nD1 |
61-245 |
185 |
e4dmoA1 |
4DMO |
219.1.1 |
0.943 |
0.555 |
0.692 |
3.0|4.5|1 |
0.54 |
0.826 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
5 |
no |
no |
PF04723 |
A0A3A6P2K0 |
18-161 |
nD1 |
16-165 |
150 |
e4rdcA1 |
4RDC |
2007.1.2 |
0.92 |
0.0 |
0.89 |
7.6|7.6|1 |
0.837 |
1.049 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Periplasmic binding protein-like I |
5 |
5 |
no |
no |
PF04723 |
A0A2G6LU42 |
5-149 |
nD1 |
1-150 |
150 |
e4xfkA2 |
4XFK |
2007.1.2 |
0.935 |
0.0 |
0.849 |
6.3|6.6|0 |
0.825 |
1.049 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Periplasmic binding protein-like I |
5 |
4 |
no |
no |
PF04724 |
I1N6Z4 |
40-385 |
nD1 |
41-385 |
345 |
e2d0jA1 |
2D0J |
7516.1.1 |
0.888 |
0.536 |
0.429 |
8.7|9.6|1 |
0.775 |
1.302 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
9 |
11 |
no |
yes:1 |
PF04724 |
Q9SKF0 |
18-360 |
nD1 |
36-360 |
325 |
e5ekeC1 |
5EKE |
7516.1.1 |
0.877 |
0.464 |
0.296 |
6.6|9.4|1 |
0.713 |
1.226 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
9 |
11 |
no |
yes:out |
PF04740 |
Q8ERI3 |
4-196 |
nD1 |
6-200,211-220 |
205 |
e6q0xD2 |
6Q0X |
4177.1.1 |
0.9 |
0.691 |
0.813 |
7.4|7.8|1 |
0.746 |
0.822 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
6 |
2 |
no |
no |
PF04740 |
O31998 |
2-202 |
nD1 |
6-235 |
230 |
e4nqiD1 |
4NQI |
4177.1.1 |
0.924 |
0.0 |
0.449 |
9.2|9.2|1 |
0.811 |
0.922 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
6 |
2 |
no |
no |
PF04740 |
Q65M69 |
2-202 |
nD1 |
6-235 |
230 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.869 |
0.0 |
0.249 |
8.8|8.8|1 |
0.515 |
1.42 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
5 |
2 |
no |
no |
PF04754 |
Q8ZRA4 |
7-207 |
nD2 |
156-255 |
100 |
e4q94B1 |
4Q94 |
109.4.1 |
0.924 |
0.0 |
0.0 |
5.0|6.2|1 |
0.771 |
0.35 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
4 |
0 |
no |
no |
PF04754 |
A0A384KBM0 |
19-220 |
nD1 |
21-150 |
130 |
e5gkeA2 |
5GKE |
2008.1.1 |
0.947 |
0.0 |
0.0 |
6.2|6.2|1 |
0.833 |
0.637 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
4 |
4 |
no |
no |
PF04778 |
D1J8L6 |
134-285 |
nD3 |
196-280 |
85 |
e2qxlA12 |
2QXL |
632.7.1 |
0.925 |
0.0 |
0.0 |
8.7|9.1|0 |
0.757 |
0.817 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
3 |
0 |
yes:out |
no |
PF04778 |
A0A7Z3HYT5 |
117-272 |
nD3 |
186-255 |
70 |
e2ewfA3 |
2EWF |
632.23.1 |
0.855 |
0.0 |
0.0 |
10.6|10.6|1 |
0.846 |
0.897 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Helical linker domain in nicking endonuclease N.BspD6I |
Helical linker domain in nicking endonuclease N.BspD6I |
3 |
0 |
no |
no |
PF04782 |
U5GGE0 |
330-677 |
nD1 |
1-55,331-355,451-565,581-680,711-765 |
350 |
e2x3vA1 |
2X3V |
4177.1.1 |
0.868 |
0.0 |
0.909 |
8.1|10.1|1 |
0.548 |
1.403 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
9 |
2 |
no |
no |
PF04783 |
U5GGE0 |
1-59 |
nD1 |
1-55,331-355,451-565,581-680,711-765 |
350 |
e2x3vA1 |
2X3V |
4177.1.1 |
0.868 |
0.0 |
0.909 |
8.1|10.1|1 |
0.548 |
1.403 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
9 |
2 |
no |
no |
PF04791 |
A0DAS1 |
121-599 |
nD2 |
111-295,436-605 |
355 |
e7m4pA8 |
7M4P |
5067.1.1 |
0.897 |
0.713 |
0.0 |
4.1|5.9|0 |
0.693 |
1.621 |
pymol |
more |
good_domain |
alpha bundles |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
12 |
2 |
no |
yes:9 |
PF04831 |
H2MZF5 |
30-256 |
nD1 |
31-105 |
75 |
e2w2uA2 |
2W2U |
604.12.1 |
0.93 |
0.0 |
0.0 |
9.0|9.0|1 |
0.934 |
0.867 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF04833 |
D7TGW4 |
44-206 |
nD1 |
26-205 |
180 |
e6qfsG1 |
6QFS |
11.1.5 |
0.948 |
0.0 |
0.382 |
9.9|10.3|1 |
1.0 |
1.169 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
11 |
no |
yes:out |
PF04833 |
A0A397Y1C0 |
8-164 |
nD1 |
1-165 |
165 |
e6qfsG1 |
6QFS |
11.1.5 |
0.9 |
0.0 |
0.138 |
9.6|9.6|1 |
0.897 |
1.071 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
0 |
10 |
no |
no |
PF04842 |
I1KIY0 |
459-688 |
nD4 |
516-535,581-680 |
120 |
e4umoB1 |
4UMO |
6170.1.1 |
0.895 |
0.0 |
0.0 |
3.1|3.2|0 |
0.735 |
1.437 |
pymol |
more |
good_domain |
alpha bundles |
Kv7 proximal C-terminal Domain |
Kv7 proximal C-terminal Domain |
Kv7 proximal C-terminal Domain |
5 |
0 |
no |
yes:1 |
PF04859 |
D8TEP6 |
34-167 |
nD1 |
16-105 |
90 |
e2p01A1 |
2P01 |
632.8.1 |
0.887 |
0.0 |
0.0 |
8.1|8.1|1 |
0.764 |
0.811 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
2 |
2 |
no |
no |
PF04877 |
Q2LJ20 |
1-358 |
nD2 |
151-215 |
65 |
e3cjhB1 |
3CJH |
4120.1.1 |
0.935 |
0.0 |
0.0 |
3.8|3.8|1 |
0.743 |
0.884 |
pymol |
more |
good_domain |
few secondary structure elements |
Tim10/DDP |
Tim10/DDP |
Tim10/DDP |
3 |
1 |
no |
no |
PF04891 |
A0A3N8AQJ3 |
41-192 |
nD1 |
6-173 |
168 |
e7ef9A1 |
7EF9 |
102.1.2 |
0.888 |
0.0 |
0.182 |
3.1|3.1|1 |
0.615 |
0.808 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
DNA-glycosylase |
8 |
0 |
no |
no |
PF04936 |
Q9CFQ2 |
4-189 |
nD1 |
6-75 |
70 |
e1u3eM1 |
1U3E |
101.1.14 |
0.901 |
0.756 |
0.898 |
4.5|4.5|1 |
0.648 |
1.061 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
DNA-binding domain of intron-encoded endonucleases |
3 |
3 |
no |
no |
PF04936 |
Q9CFQ2 |
4-189 |
nD2 |
81-145 |
65 |
e1i3jA2 |
1I3J |
101.1.14 |
0.927 |
0.282 |
0.699 |
4.5|5.0|1 |
0.701 |
0.985 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
DNA-binding domain of intron-encoded endonucleases |
3 |
3 |
no |
no |
PF04936 |
Q9CGR9 |
4-189 |
nD1 |
11-75 |
65 |
e1u3eM1 |
1U3E |
101.1.14 |
0.891 |
0.713 |
0.903 |
4.5|4.5|1 |
0.576 |
0.985 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
DNA-binding domain of intron-encoded endonucleases |
3 |
2 |
no |
no |
PF04936 |
Q9CGR9 |
4-189 |
nD2 |
76-140 |
65 |
e1u3eM1 |
1U3E |
101.1.14 |
0.936 |
0.596 |
0.758 |
4.5|4.8|1 |
0.712 |
0.985 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
DNA-binding domain of intron-encoded endonucleases |
3 |
3 |
no |
no |
PF04936 |
A0A552YZM1 |
4-189 |
nD2 |
81-140 |
60 |
e1u3eM1 |
1U3E |
101.1.14 |
0.934 |
0.558 |
0.68 |
4.8|4.8|1 |
0.632 |
0.909 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
DNA-binding domain of intron-encoded endonucleases |
3 |
3 |
no |
no |
PF04942 |
A8XVZ6 |
17-51 |
nD1 |
31-55,61-95 |
60 |
e3t5oA9 |
3T5O |
389.1.1 |
0.875 |
0.257 |
0.723 |
0.0|0.0|1 |
1.0 |
1.412 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
2 |
5 |
yes:out |
no |
PF04947 |
L1JNN8 |
40-203 |
nD1 |
66-120 |
55 |
e3d5lA1 |
3D5L |
101.35.1 |
0.928 |
0.284 |
0.0 |
3.5|3.5|1 |
0.858 |
1.146 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
0 |
no |
no |
PF04976 |
A0A1V3BTY8 |
3-296 |
nD2 |
176-310 |
135 |
e2vpwC1 |
2VPW |
5069.1.1 |
0.947 |
0.0 |
0.971 |
8.8|9.6|1 |
0.671 |
0.637 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:3 |
PF04976 |
A0A1V3A1M5 |
3-296 |
nD2 |
176-210,236-310 |
110 |
e2vpwC1 |
2VPW |
5069.1.1 |
0.949 |
0.0 |
0.974 |
8.8|9.4|1 |
0.671 |
0.519 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
3 |
0 |
no |
yes:3 |
PF04986 |
A5GBJ9 |
131-293 |
nD2 |
76-310 |
235 |
e1omhA1 |
1OMH |
304.55.1 |
0.949 |
0.971 |
0.969 |
6.7|7.7|1 |
0.694 |
1.473 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Origin of replication-binding domains |
6 |
9 |
no |
no |
PF04987 |
H2Z1T0 |
447-883 |
nD4 |
1-30,456-490,856-905 |
115 |
e5h5mA2 |
5H5M |
601.1.1 |
0.907 |
0.0 |
0.0 |
8.2|8.2|1 |
0.792 |
0.878 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
0 |
no |
yes:4 |
PF04987 |
H2Z1T0 |
447-883 |
nD6 |
581-855 |
275 |
e3i9wA2 |
3I9W |
601.4.1 |
0.927 |
0.0 |
0.0 |
6.3|6.3|1 |
0.642 |
1.91 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
10 |
0 |
no |
yes:9 |
PF04987 |
H6BM22 |
449-943 |
nD2 |
1-30,456-550,861-870,926-970 |
180 |
e7a73A2 |
7A73 |
601.18.1 |
0.9 |
0.0 |
0.0 |
5.7|5.8|0 |
0.751 |
1.406 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
6 |
0 |
no |
yes:7 |
PF04987 |
H6BM22 |
449-943 |
nD3 |
631-765,871-890 |
155 |
e3i9wA2 |
3I9W |
601.4.1 |
0.937 |
0.0 |
0.0 |
6.7|6.7|1 |
0.797 |
1.076 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
5 |
1 |
no |
yes:4 |
PF04987 |
H6BM22 |
449-943 |
nD4 |
556-630,766-790,836-860,891-925 |
160 |
e3i9wA2 |
3I9W |
601.4.1 |
0.892 |
0.0 |
0.0 |
5.6|5.6|1 |
0.588 |
1.111 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
6 |
0 |
no |
yes:7 |
PF05011 |
A0A1B7SQY1 |
235-359 |
nD2 |
266-363 |
98 |
e5ukiA1 |
5UKI |
6147.1.1 |
0.859 |
1.0 |
0.0 |
0.0|0.0|0 |
0.943 |
1.126 |
pymol |
more |
good_domain |
alpha arrays |
C-terminal domain of Dbr1 |
C-terminal domain of Dbr1 |
C-terminal domain of Dbr1 |
4 |
2 |
no |
no |
PF05017 |
Q9KE96 |
344-354 |
nD8 |
331-405,411-450 |
115 |
e5n9jE1 |
5N9J |
4207.1.2 |
0.909 |
0.0 |
0.0 |
5.7|5.7|0 |
0.749 |
1.085 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
MED7 hinge region |
3 |
0 |
no |
yes:out |
PF05037 |
A0A374E7W5 |
21-144 |
nD1 |
31-154 |
124 |
e1bcpF1 |
1BCP |
2.2.1 |
0.88 |
0.0 |
0.0 |
5.5|7.3|0 |
0.866 |
1.272 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Bacterial enterotoxins |
Bacterial enterotoxins |
2 |
5 |
no |
no |
PF05042 |
A0A060LAL9 |
57-223 |
nD1 |
11-230 |
220 |
e3akbA2 |
3AKB |
108.1.1 |
0.946 |
0.741 |
0.898 |
3.1|5.3|1 |
0.917 |
2.472 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
8 |
5 |
no |
yes:1 |
PF05055 |
P0DI79 |
28-380 |
nD2 |
116-170,306-335 |
85 |
e6egcA1 |
6EGC |
192.29.1 |
0.882 |
0.0 |
0.0 |
10.1|11.6|0 |
0.596 |
1.118 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
yes:out |
PF05075 |
E3NE55 |
33-366 |
nD1 |
31-205 |
175 |
e7rdrC2 |
7RDR |
109.3.1 |
0.9 |
0.0 |
0.0 |
9.5|9.5|1 |
0.496 |
0.879 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
1 |
yes:out |
no |
PF05085 |
Q9S0F1 |
7-271 |
nD1 |
31-95 |
65 |
e5y6pdz2 |
5Y6P |
807.1.1 |
0.865 |
0.0 |
0.0 |
3.0|3.8|0 |
0.954 |
1.048 |
pymol |
more |
good_domain |
a+b two layers |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
2 |
2 |
no |
no |
PF05085 |
Q9S0F1 |
7-271 |
nD2 |
161-270 |
110 |
e6o38B4 |
6O38 |
520.2.1 |
0.862 |
0.0 |
0.0 |
5.1|5.1|1 |
0.816 |
1.176 |
pymol |
more |
good_domain |
beta sandwiches |
gp9 N-terminal domain-like |
beta-sandwich domain in metalloprotease stcE |
beta-sandwich domain in metalloprotease stcE |
1 |
7 |
no |
no |
PF05086 |
P10511 |
2-891 |
nD2 |
661-695,721-805 |
120 |
e3dshA1 |
3DSH |
73.1.1 |
0.947 |
0.0 |
0.0 |
5.7|6.8|1 |
0.759 |
1.0 |
pymol |
more |
good_domain |
beta sandwiches |
SMAD/FHA domain |
SMAD/FHA domain |
SMAD/FHA domain |
2 |
9 |
no |
no |
PF05086 |
Q23895 |
2-882 |
nD1 |
366-480,536-575 |
155 |
e2bkrA1 |
2BKR |
219.1.1 |
0.894 |
0.0 |
0.0 |
3.9|7.2|1 |
0.429 |
0.692 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
4 |
7 |
no |
no |
PF05102 |
O50906 |
1-59 |
nD1 |
1-50 |
50 |
e3jc9Oa2 |
3JC9 |
6055.1.1 |
0.927 |
0.523 |
0.194 |
2.5|3.3|0 |
0.865 |
1.176 |
pymol |
more |
good_domain |
extended segments |
Preprotein translocase subunit YajC |
Preprotein translocase subunit YajC |
Preprotein translocase subunit YajC |
3 |
0 |
no |
yes:1 |
PF05117 |
A0A250FGW0 |
8-140 |
nD1 |
6-140 |
135 |
e5l38A1 |
5L38 |
304.54.1 |
0.895 |
0.0 |
0.24 |
7.4|7.6|0 |
0.929 |
1.324 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
4 |
6 |
no |
no |
PF05117 |
D6BIQ4 |
1-127 |
nD1 |
6-130 |
125 |
e2a10C1 |
2A10 |
304.54.1 |
0.915 |
0.0 |
0.0 |
7.5|8.4|0 |
0.914 |
1.225 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
4 |
5 |
no |
no |
PF05123 |
Q58232 |
120-467 |
nD1 |
96-125,161-215,356-440 |
170 |
e3u2gA1 |
3U2G |
5090.1.1 |
0.939 |
0.993 |
0.146 |
7.1|7.1|1 |
0.926 |
0.572 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
2 |
12 |
yes:out |
no |
PF05123 |
A6URZ5 |
118-476 |
nD1 |
91-120,156-225,366-450 |
185 |
e3u2gA1 |
3U2G |
5090.1.1 |
0.932 |
0.991 |
0.0 |
7.6|7.6|1 |
0.901 |
0.623 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
2 |
15 |
yes:out |
no |
PF05123 |
A6URZ5 |
118-476 |
nD2 |
241-365 |
125 |
e3uc0B1 |
3UC0 |
5090.1.1 |
0.891 |
0.0 |
0.973 |
6.8|9.3|1 |
0.816 |
0.421 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
0 |
10 |
yes:out |
no |
PF05124 |
Q58232 |
34-558 |
nD1 |
96-125,161-215,356-440 |
170 |
e3u2gA1 |
3U2G |
5090.1.1 |
0.939 |
0.993 |
0.146 |
7.1|7.1|1 |
0.926 |
0.572 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
2 |
12 |
yes:out |
no |
PF05124 |
Q58232 |
34-558 |
nD3 |
31-80,476-558 |
133 |
e4zmhA2 |
4ZMH |
2498.2.1 |
0.921 |
0.323 |
0.5 |
12.6|12.6|1 |
0.758 |
0.964 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
beta-N-acetylhexosaminidase-like domain |
beta-N-acetylhexosaminidase-like domain |
5 |
7 |
yes:out |
no |
PF05124 |
A6UUR1 |
35-561 |
nD3 |
31-80,476-560 |
135 |
e4zmhA2 |
4ZMH |
2498.2.1 |
0.933 |
0.415 |
0.587 |
12.0|12.0|1 |
0.767 |
0.978 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
beta-N-acetylhexosaminidase-like domain |
beta-N-acetylhexosaminidase-like domain |
4 |
6 |
yes:out |
no |
PF05124 |
Q6LZQ5 |
33-528 |
nD1 |
91-210,346-425 |
200 |
e3u2gA1 |
3U2G |
5090.1.1 |
0.889 |
0.989 |
0.0 |
7.1|7.1|1 |
0.926 |
0.673 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
1 |
14 |
yes:out |
no |
PF05124 |
Q6LZQ5 |
33-528 |
nD2 |
227-345 |
119 |
e3uc0B1 |
3UC0 |
5090.1.1 |
0.917 |
0.0 |
0.975 |
7.0|8.6|1 |
0.812 |
0.401 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Viral glycoprotein, central and dimerisation domains |
Viral glycoprotein, central and dimerisation domains |
0 |
10 |
yes:out |
no |
PF05144 |
R6EYZ1 |
1-195 |
nD1 |
1-95 |
95 |
e4cwcA1 |
4CWC |
331.1.1 |
0.911 |
0.988 |
0.0 |
4.0|4.9|0 |
0.844 |
1.005 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
4 |
6 |
no |
no |
PF05144 |
O85503 |
1-232 |
nD1 |
1-115 |
115 |
e1kfqA1 |
1KFQ |
331.2.1 |
0.917 |
0.0 |
0.0 |
4.0|4.1|1 |
0.757 |
1.168 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Phosphoglucomutase, C-terminal domain |
Phosphoglucomutase, C-terminal domain |
3 |
6 |
no |
no |
PF05149 |
Q57XR7 |
378-664 |
nD4 |
296-350,536-665 |
185 |
e5nenB1 |
5NEN |
5086.1.1 |
0.937 |
0.0 |
0.0 |
10.7|10.7|1 |
0.609 |
2.189 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
5 |
0 |
no |
no |
PF05150 |
A0A2S8GDD4 |
5-292 |
nD1 |
6-295 |
290 |
e2x4mA1 |
2X4M |
5084.2.1 |
0.866 |
0.986 |
0.984 |
16.7|18.7|1 |
0.665 |
0.997 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPT-like |
OMPT-like |
1 |
15 |
no |
no |
PF05154 |
A0A4U8VJ35 |
15-63 |
nD1 |
16-158 |
143 |
e5fvkA1 |
5FVK |
604.12.1 |
0.941 |
0.0 |
0.0 |
6.4|6.4|1 |
0.961 |
1.653 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
6 |
0 |
no |
yes:4 |
PF05155 |
Q9K394 |
329-416 |
nD3 |
316-390 |
75 |
e4lmyB1 |
4LMY |
101.1.2 |
0.918 |
0.356 |
0.61 |
4.6|4.6|1 |
0.706 |
0.789 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
2 |
no |
no |
PF05178 |
G8ZL96 |
286-381 |
nD2 |
261-360,406-450 |
145 |
e5m9eB1 |
5M9E |
4307.1.1 |
0.876 |
0.0 |
0.0 |
5.2|5.3|0 |
0.987 |
2.042 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
EB1 dimerisation domain-like |
EB1 dimerisation domain-like |
EB1 dimerisation domain-like |
4 |
0 |
no |
no |
PF05218 |
B6IKX0 |
69-266 |
nD2 |
86-250 |
165 |
e6egcA1 |
6EGC |
192.29.1 |
0.922 |
0.0 |
0.0 |
10.0|10.0|1 |
0.883 |
2.171 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
no |
PF05218 |
E3NAZ6 |
303-493 |
nD3 |
321-495 |
175 |
e6egcA1 |
6EGC |
192.29.1 |
0.887 |
0.0 |
0.0 |
11.5|11.9|0 |
0.896 |
2.303 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
no |
PF05230 |
Q2SDT4 |
2-91 |
nD1 |
1-160 |
160 |
e3kkbB1 |
3KKB |
603.1.1 |
0.858 |
0.0 |
0.0 |
6.5|7.5|0 |
0.88 |
1.524 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
5 |
0 |
no |
yes:5 |
PF05230 |
D5WYX1 |
18-105 |
nD1 |
6-175 |
170 |
e1r0dI1 |
1R0D |
601.1.2 |
0.888 |
0.0 |
0.0 |
6.2|6.7|0 |
0.834 |
1.03 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
0 |
no |
yes:5 |
PF05246 |
O50904 |
3-206 |
nD2 |
71-130,166-195 |
90 |
e3h2tA3 |
3H2T |
327.20.1 |
0.854 |
0.0 |
0.0 |
5.5|5.5|1 |
0.819 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Baseplate structural protein gp6 C-terminal domain I |
Baseplate structural protein gp6 C-terminal domain I |
3 |
4 |
no |
no |
PF05246 |
A0A7U3YAR6 |
1-201 |
nD2 |
46-125,166-200 |
115 |
e3l0oA5 |
3L0O |
130.1.1 |
0.946 |
0.0 |
0.0 |
2.9|4.8|0 |
0.857 |
2.091 |
pymol |
more |
good_domain |
alpha arrays |
LEM/SAP HeH motif-like |
LEM/SAP HeH motif |
LEM/SAP HeH motif |
4 |
4 |
no |
no |
PF05246 |
A0A2S1LYR5 |
1-196 |
nD2 |
41-125,171-200 |
115 |
e5hx2A4 |
5HX2 |
102.7.1 |
0.939 |
0.731 |
0.917 |
4.8|4.8|1 |
0.843 |
1.127 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
Baseplate wedge protein gp7 domain IV |
Baseplate wedge protein gp7 domain IV |
4 |
4 |
no |
no |
PF05255 |
T1K155 |
4-156 |
nD1 |
21-150 |
130 |
e3l39A1 |
3L39 |
604.5.1 |
0.934 |
0.0 |
0.0 |
8.0|8.0|1 |
0.554 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:4 |
PF05255 |
A5DH76 |
4-172 |
nD1 |
21-178 |
158 |
e5f5pA1 |
5F5P |
1203.1.2 |
0.855 |
0.0 |
0.0 |
7.4|7.4|1 |
0.753 |
0.873 |
pymol |
more |
good_domain |
alpha bundles |
Shroom domain 2 |
Shroom domain 2 |
Human SD2 |
4 |
0 |
no |
yes:4 |
PF05266 |
J3N7N2 |
725-918 |
nD3 |
726-835 |
110 |
e4w8jA4 |
4W8J |
604.27.1 |
0.85 |
0.0 |
0.0 |
5.8|5.8|1 |
0.855 |
1.202 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Triple-helical domain in insecticidal protein Cry1Ac |
Triple-helical domain in insecticidal protein Cry1Ac |
4 |
0 |
no |
no |
PF05267 |
A0A182JU86 |
362-473 |
nD2 |
231-270,286-410,441-495 |
220 |
e3s84B1 |
3S84 |
601.19.1 |
0.885 |
0.367 |
0.0 |
5.8|11.0|0 |
0.737 |
0.913 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
5 |
0 |
yes:out |
no |
PF05284 |
F6IHT1 |
2-104 |
nD1 |
1-103 |
103 |
e4innB1 |
4INN |
9.1.1 |
0.861 |
0.0 |
0.0 |
4.5|4.5|1 |
0.524 |
0.673 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
0 |
8 |
no |
no |
PF05284 |
W0AAJ3 |
18-119 |
nD1 |
16-120 |
105 |
e2c4iA2 |
2C4I |
9.2.1 |
0.854 |
0.0 |
0.0 |
5.7|5.7|1 |
0.58 |
0.808 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Avidin/Streptavidin |
Avidin/Streptavidin |
0 |
8 |
no |
no |
PF05289 |
G0ANF4 |
4-114 |
nD1 |
1-110 |
110 |
e3kbuB3 |
3KBU |
604.1.1 |
0.92 |
0.0 |
0.0 |
8.2|8.2|1 |
0.942 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
1 |
no |
no |
PF05289 |
A0A7W8FCQ8 |
4-103 |
nD1 |
1-110 |
110 |
e1hx8A1 |
1HX8 |
604.6.1 |
0.939 |
0.0 |
0.0 |
7.7|8.2|1 |
0.829 |
1.158 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
4 |
1 |
no |
no |
PF05305 |
A0A285IPE0 |
2-71 |
nD1 |
1-65 |
65 |
e3dfgA2 |
3DFG |
101.35.1 |
0.925 |
0.0 |
0.481 |
5.6|6.1|0 |
0.952 |
1.354 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
4 |
0 |
no |
no |
PF05315 |
A0A0G0I9M7 |
2-223 |
nD1 |
1-75 |
75 |
e6tutO5 |
6TUT |
101.1.2 |
0.949 |
0.0 |
0.0 |
3.3|4.4|1 |
0.838 |
0.789 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF05317 |
A0A830GVV4 |
1-243 |
nD1 |
1-265 |
265 |
e4qhwA2 |
4QHW |
10.1.1 |
0.899 |
0.0 |
0.0 |
13.9|13.9|1 |
0.903 |
1.238 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
0 |
17 |
no |
no |
PF05317 |
A0A101X4N7 |
6-258 |
nD1 |
1-280 |
280 |
e4qhwA2 |
4QHW |
10.1.1 |
0.898 |
0.0 |
0.0 |
14.0|14.0|1 |
0.925 |
1.308 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
0 |
18 |
no |
no |
PF05325 |
M4E8A0 |
45-150 |
nD1 |
56-100 |
45 |
e5u6zA1 |
5U6Z |
387.1.1 |
0.876 |
0.91 |
0.749 |
3.1|3.7|0 |
0.627 |
1.25 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
omega toxin-related |
1 |
3 |
no |
yes:out |
PF05360 |
A0A165R4F5 |
13-65 |
nD1 |
6-154 |
149 |
e5f5pA1 |
5F5P |
1203.1.2 |
0.89 |
0.0 |
0.0 |
12.5|12.5|1 |
0.83 |
0.823 |
pymol |
more |
good_domain |
alpha bundles |
Shroom domain 2 |
Shroom domain 2 |
Human SD2 |
4 |
0 |
no |
yes:4 |
PF05377 |
D3S527 |
26-80 |
nD2 |
36-140 |
105 |
e6fkfp1 |
6FKF |
5046.1.1 |
0.867 |
0.0 |
0.0 |
5.1|5.2|0 |
0.787 |
0.675 |
pymol |
more |
good_domain |
extended segments |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
3 |
0 |
no |
no |
PF05380 |
A0A4Y2HC55 |
23-183 |
nD2 |
86-190 |
105 |
e3u3gD1 |
3U3G |
2484.1.1 |
0.904 |
0.0 |
0.0 |
7.5|7.5|1 |
0.737 |
0.536 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
2 |
5 |
no |
no |
PF05425 |
A0A2Z6GB96 |
44-146 |
nD1 |
1-150 |
150 |
e6egcA1 |
6EGC |
192.29.1 |
0.938 |
0.0 |
0.0 |
13.9|13.9|1 |
0.973 |
1.974 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF05427 |
E9HAG3 |
4-370 |
nD1 |
11-200 |
190 |
e2cueA1 |
2CUE |
101.1.1 |
0.866 |
0.0 |
0.312 |
2.5|5.1|0 |
0.886 |
2.603 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
10 |
2 |
no |
no |
PF05465 |
P24574 |
3-34 |
nD1 |
6-145,151-245 |
235 |
e2ap3A1 |
2AP3 |
601.27.1 |
0.922 |
0.945 |
0.355 |
0.0|5.8|0 |
0.55 |
1.27 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
MW0975(SA0943)-like |
MW0975(SA0943)-like |
3 |
0 |
no |
no |
PF05476 |
A0A0X8HUZ0 |
7-253 |
nD2 |
156-280 |
125 |
e4leuA1 |
4LEU |
109.4.1 |
0.911 |
0.0 |
0.227 |
6.5|8.5|1 |
0.694 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
no |
PF05477 |
W5KL42 |
5-240 |
nD2 |
76-125 |
50 |
e2mkdA1 |
2MKD |
386.1.1 |
0.941 |
0.0 |
0.799 |
3.0|3.0|1 |
0.879 |
1.515 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
2 |
no |
no |
PF05477 |
O57589 |
6-232 |
nD2 |
66-115 |
50 |
e2mkdA1 |
2MKD |
386.1.1 |
0.915 |
0.0 |
0.797 |
3.6|5.6|0 |
0.822 |
1.515 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
3 |
no |
no |
PF05478 |
M9PBK6 |
76-881 |
nD3 |
111-125,161-195,211-245,481-565,846-880 |
205 |
e1r0dI1 |
1R0D |
601.1.2 |
0.94 |
0.0 |
0.0 |
7.9|13.7|0 |
0.804 |
1.242 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
3 |
no |
yes:5 |
PF05478 |
M9PBK6 |
76-881 |
nD5 |
301-420,666-790 |
245 |
e4iloB5 |
4ILO |
3755.3.1 |
0.939 |
0.0 |
0.0 |
6.8|10.4|0 |
0.535 |
1.424 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
10 |
1 |
no |
yes:out |
PF05478 |
O43490 |
18-820 |
nD1 |
51-205,426-460,476-520,771-820 |
285 |
e4k1pD1 |
4K1P |
3758.1.1 |
0.926 |
0.721 |
0.73 |
4.9|7.3|1 |
0.531 |
0.805 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial hemolysins-like |
Bacterial hemolysins |
Bacterial hemolysins |
7 |
0 |
yes:out |
yes:5 |
PF05508 |
Q4WHM9 |
1-344 |
nD1 |
21-165 |
145 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.894 |
0.0 |
0.0 |
10.0|10.8|0 |
0.823 |
0.858 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
4 |
0 |
no |
no |
PF05508 |
T0LDN9 |
1-385 |
nD1 |
21-155 |
135 |
e4m70H1 |
4M70 |
611.9.1 |
0.886 |
0.0 |
0.0 |
9.9|9.9|1 |
0.972 |
1.154 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
Resistance protein (Rx) N-terminal domain |
Resistance protein (Rx) N-terminal domain |
4 |
0 |
no |
no |
PF05529 |
A5DK51 |
1-140 |
nD1 |
1-145 |
145 |
e1s35A1 |
1S35 |
604.1.1 |
0.883 |
0.0 |
0.0 |
8.4|8.4|1 |
0.924 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
yes:3 |
PF05535 |
A0A1I7W363 |
40-119 |
nD1 |
46-120 |
75 |
e3sk2B1 |
3SK2 |
211.1.1 |
0.852 |
0.0 |
0.0 |
2.1|2.1|1 |
0.676 |
1.103 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
1 |
4 |
yes:out |
no |
PF05537 |
Q9S0I6 |
1-422 |
nD3 |
166-320 |
155 |
e5cwcA1 |
5CWC |
159.1.2 |
0.911 |
0.0 |
0.0 |
6.7|6.7|1 |
0.617 |
1.685 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
8 |
0 |
no |
no |
PF05537 |
Q9S0F6 |
1-429 |
nD2 |
166-325 |
160 |
e5cwcA1 |
5CWC |
159.1.2 |
0.904 |
0.0 |
0.0 |
6.2|6.2|1 |
0.597 |
1.739 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
8 |
1 |
no |
no |
PF05537 |
Q9S000 |
1-429 |
nD3 |
161-325 |
165 |
e5cwcA1 |
5CWC |
159.1.2 |
0.898 |
0.0 |
0.0 |
5.3|5.3|1 |
0.597 |
1.793 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
8 |
1 |
no |
no |
PF05540 |
D8IFY2 |
2-361 |
nD1 |
21-365 |
345 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.901 |
0.0 |
0.273 |
17.1|17.1|1 |
0.925 |
0.938 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
18 |
yes:out |
no |
PF05540 |
A0A5C8ELW2 |
2-362 |
nD1 |
21-365 |
345 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.897 |
0.0 |
0.128 |
16.2|16.2|1 |
0.904 |
0.938 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
18 |
yes:out |
no |
PF05540 |
G0EQH1 |
1-367 |
nD1 |
16-370 |
355 |
e4y25A1 |
4Y25 |
5084.5.1 |
0.86 |
0.0 |
0.174 |
16.3|16.3|1 |
0.912 |
0.965 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
23 |
yes:in |
no |
PF05546 |
V2WTU4 |
101-294 |
nD1 |
76-280 |
205 |
e5y06A1 |
5Y06 |
3755.3.1 |
0.894 |
0.68 |
0.649 |
9.6|10.4|0 |
0.605 |
1.192 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:1 |
PF05548 |
Q8S9B5 |
146-457 |
nD3 |
346-488 |
143 |
e4yu6A3 |
4YU6 |
5090.2.1 |
0.922 |
0.998 |
0.982 |
6.3|6.3|1 |
0.553 |
0.688 |
pymol |
more |
good_domain |
beta complex topology |
Viral glycoprotein, central and dimerisation domains-like |
Immune inhibitor A metallopeptidase C-terminal domain |
Immune inhibitor A metallopeptidase C-terminal domain |
1 |
9 |
yes:out |
no |
PF05555 |
Q83CL6 |
4-271 |
nD1 |
31-250 |
220 |
e4kgoB1 |
4KGO |
883.1.1 |
0.904 |
0.0 |
0.218 |
7.0|7.0|1 |
0.826 |
1.014 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
6 |
6 |
no |
no |
PF05555 |
Q45935 |
5-232 |
nD1 |
36-45,71-225 |
165 |
e5wd6A1 |
5WD6 |
883.1.1 |
0.9 |
0.0 |
0.0 |
7.5|7.5|1 |
0.813 |
0.76 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
5 |
5 |
no |
no |
PF05555 |
Q45912 |
5-232 |
nD1 |
71-230 |
160 |
e4kgoB1 |
4KGO |
883.1.1 |
0.886 |
0.0 |
0.0 |
5.7|7.7|1 |
0.805 |
0.737 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
4 |
4 |
no |
no |
PF05561 |
W5SV64 |
1-177 |
nD1 |
1-175 |
175 |
e2l25A1 |
2L25 |
304.124.1 |
0.933 |
0.0 |
0.0 |
10.5|11.1|1 |
0.968 |
1.306 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Phage tail protein-like |
Phage tail protein-like |
2 |
7 |
no |
no |
PF05561 |
A0A7X0DJW1 |
1-177 |
nD1 |
1-175 |
175 |
e2gjvE1 |
2GJV |
304.124.1 |
0.936 |
0.0 |
0.0 |
11.1|11.5|1 |
0.978 |
1.306 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Phage tail protein-like |
Phage tail protein-like |
2 |
7 |
no |
no |
PF05561 |
I0FEG2 |
1-177 |
nD1 |
1-170 |
170 |
e2gjvE1 |
2GJV |
304.124.1 |
0.939 |
0.0 |
0.0 |
11.2|11.3|1 |
0.969 |
1.269 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Phage tail protein-like |
Phage tail protein-like |
2 |
7 |
no |
no |
PF05576 |
Q9RDG7 |
27-474 |
nD2 |
201-310 |
110 |
e3jyhB2 |
3JYH |
3621.1.1 |
0.91 |
1.0 |
0.971 |
3.2|15.7|0 |
0.686 |
0.791 |
pymol |
more |
good_domain |
alpha arrays |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
4 |
0 |
yes:out |
no |
PF05576 |
A0A1Q5DXI1 |
43-488 |
nD2 |
216-325 |
110 |
e3jyhB2 |
3JYH |
3621.1.1 |
0.915 |
1.0 |
0.968 |
3.6|16.0|0 |
0.678 |
0.791 |
pymol |
more |
good_domain |
alpha arrays |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
5 |
0 |
yes:out |
no |
PF05576 |
A0A2P8QC96 |
42-480 |
nD2 |
216-325 |
110 |
e3jyhB2 |
3JYH |
3621.1.1 |
0.906 |
1.0 |
0.772 |
3.2|15.5|0 |
0.672 |
0.791 |
pymol |
more |
good_domain |
alpha arrays |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
Dipeptidyl-peptidase 2 helical domain |
5 |
0 |
yes:out |
no |
PF05580 |
C8WXF9 |
189-396 |
nD3 |
96-110,196-400 |
220 |
e3k6yA1 |
3K6Y |
1.1.17 |
0.946 |
0.92 |
0.944 |
11.3|14.9|1 |
0.872 |
0.952 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel 2 |
3 |
15 |
yes:out |
no |
PF05580 |
G8LW28 |
215-424 |
nD3 |
116-130,226-435 |
225 |
e3k6yA1 |
3K6Y |
1.1.17 |
0.934 |
0.922 |
0.945 |
12.2|14.2|1 |
0.887 |
0.974 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel 2 |
3 |
15 |
yes:out |
no |
PF05589 |
A0A1H9GCD0 |
1-67 |
nD1 |
6-70 |
65 |
e3e3vA3 |
3E3V |
101.35.1 |
0.945 |
0.0 |
0.278 |
5.9|5.9|0 |
0.852 |
1.354 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
0 |
no |
no |
PF05590 |
B2I8V3 |
25-282 |
nD1 |
46-120,151-280 |
205 |
e6e5fA1 |
6E5F |
881.1.1 |
0.939 |
0.943 |
0.93 |
8.1|9.5|1 |
0.85 |
1.246 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
6 |
11 |
yes:out |
no |
PF05590 |
Q9PEY6 |
25-282 |
nD1 |
46-115,151-280 |
200 |
e6e5fA1 |
6E5F |
881.1.1 |
0.944 |
0.943 |
0.928 |
8.2|9.5|1 |
0.859 |
1.216 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
5 |
11 |
yes:out |
no |
PF05594 |
A0A7Y3TVW9 |
331-411 |
nD1 |
1-410 |
410 |
e2odlA1 |
2ODL |
207.2.1 |
0.886 |
0.0 |
0.089 |
23.6|23.6|1 |
0.871 |
1.079 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
40 |
no |
no |
PF05602 |
B4NRW3 |
53-499 |
nD1 |
91-200,231-315 |
195 |
e5sydB1 |
5SYD |
3156.1.1 |
0.853 |
0.0 |
0.0 |
3.7|3.7|1 |
0.771 |
1.327 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
2 |
11 |
no |
yes:out |
PF05602 |
B4NRW3 |
53-499 |
nD2 |
346-440,466-475 |
105 |
e7bgmA2 |
7BGM |
159.1.2 |
0.905 |
0.0 |
0.0 |
6.9|6.9|1 |
0.76 |
1.141 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
5 |
1 |
no |
yes:2 |
PF05602 |
B3RV52 |
8-421 |
nD2 |
46-135,166-179,206-240 |
139 |
e5sydB1 |
5SYD |
3156.1.1 |
0.932 |
0.0 |
0.0 |
5.4|5.4|1 |
0.791 |
0.946 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
2 |
9 |
no |
yes:out |
PF05602 |
S3CY10 |
26-511 |
nD2 |
366-450 |
85 |
e4rngC1 |
4RNG |
6155.1.1 |
0.935 |
0.496 |
0.588 |
5.5|5.5|1 |
0.759 |
0.971 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TOG superfamily |
SWEET transporter |
SWEET transporter |
3 |
0 |
no |
yes:3 |
PF05605 |
I1M073 |
44-97 |
nD1 |
46-105 |
60 |
e2lvhA1 |
2LVH |
386.1.1 |
0.94 |
0.0 |
0.945 |
2.0|2.5|0 |
0.835 |
1.818 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
1 |
no |
no |
PF05616 |
Q9JY49 |
44-500 |
nD3 |
36-60,271-314 |
69 |
e3t4nB1 |
3T4N |
4086.1.1 |
0.851 |
0.0 |
0.0 |
2.8|2.8|1 |
0.475 |
0.742 |
pymol |
more |
good_domain |
a+b two layers |
AMPKBI-like |
AMPKBI-like |
AMPKBI-like |
0 |
6 |
no |
yes:out |
PF05622 |
I3JN47 |
192-705 |
nD2 |
171-230,236-295,331-425,461-530 |
285 |
e3ojaA2 |
3OJA |
105.2.1 |
0.924 |
0.562 |
0.754 |
5.7|6.9|0 |
0.545 |
1.532 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
Dimerization domain in LRIM1/APL1C |
Dimerization domain in LRIM1/APL1C |
3 |
0 |
no |
no |
PF05633 |
Q6DYE2 |
31-406 |
nD1 |
66-195,236-413 |
308 |
e7jh6B1 |
7JH6 |
3684.1.1 |
0.889 |
0.0 |
0.0 |
7.4|7.8|0 |
0.905 |
2.444 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
10 |
0 |
no |
yes:1 |
PF05640 |
A0A3P9C6A5 |
1-207 |
nD1 |
6-85,141-185 |
125 |
e6wvdA2 |
6WVD |
174.1.1 |
0.922 |
0.0 |
0.578 |
13.0|13.0|1 |
0.818 |
0.856 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
yes:in |
yes:3 |
PF05640 |
U3JEN6 |
1-206 |
nD1 |
6-85,141-185 |
125 |
e6wvdA2 |
6WVD |
174.1.1 |
0.921 |
0.0 |
0.344 |
11.1|11.1|1 |
0.814 |
0.856 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
yes:in |
yes:3 |
PF05642 |
Q4UCF0 |
1-917 |
nD1 |
531-640,656-730 |
185 |
e3crlB4 |
3CRL |
633.15.1 |
0.904 |
0.0 |
0.0 |
7.6|7.9|1 |
0.748 |
1.128 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
alpha-ketoacid dehydrogenase kinase-N |
alpha-ketoacid dehydrogenase kinase-N |
6 |
0 |
yes:out |
yes:out |
PF05642 |
Q9NJQ7 |
1-723 |
nD1 |
321-475 |
155 |
e1gkzA1 |
1GKZ |
633.15.1 |
0.88 |
0.0 |
0.0 |
10.2|10.2|1 |
0.814 |
0.945 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
alpha-ketoacid dehydrogenase kinase-N |
alpha-ketoacid dehydrogenase kinase-N |
5 |
0 |
yes:out |
yes:out |
PF05642 |
Q94814 |
1-752 |
nD1 |
346-545 |
200 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.885 |
0.0 |
0.263 |
11.0|11.0|1 |
0.798 |
1.235 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
7 |
0 |
yes:out |
yes:out |
PF05647 |
W5PLY8 |
178-244 |
nD1 |
21-305 |
285 |
e1wxrA2 |
1WXR |
207.2.1 |
0.941 |
0.0 |
0.0 |
15.7|16.0|1 |
0.336 |
0.75 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
31 |
no |
yes:out |
PF05660 |
O52876 |
1-142 |
nD1 |
36-120 |
85 |
e5mj3A1 |
5MJ3 |
11.1.1 |
0.902 |
0.0 |
0.319 |
4.8|5.2|0 |
0.638 |
0.787 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
5 |
no |
no |
PF05679 |
T1HKH9 |
158-700 |
nD2 |
296-400 |
105 |
e5ml9B1 |
5ML9 |
243.3.1 |
0.905 |
0.0 |
0.0 |
7.6|7.9|1 |
0.84 |
1.05 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
no |
no |
PF05679 |
F7BVZ9 |
248-787 |
nD2 |
371-490 |
120 |
e1wnhA1 |
1WNH |
243.3.1 |
0.872 |
0.0 |
0.0 |
7.7|7.7|1 |
0.852 |
1.2 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
5 |
yes:out |
no |
PF05679 |
Q3UU43 |
242-755 |
nD3 |
371-475 |
105 |
e6sazB1 |
6SAZ |
243.3.1 |
0.918 |
0.0 |
0.224 |
6.9|9.3|1 |
0.842 |
1.05 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
yes:out |
no |
PF05701 |
K3ZQU2 |
154-718 |
nD4 |
446-595 |
150 |
e4ll7A1 |
4LL7 |
3939.1.1 |
0.949 |
0.958 |
0.943 |
0.0|5.7|0 |
0.888 |
2.5 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
1 |
0 |
no |
no |
PF05717 |
F8KYF9 |
9-104 |
nD1 |
6-95 |
90 |
e6fpxC1 |
6FPX |
1.1.9 |
0.907 |
0.0 |
0.0 |
3.4|4.4|1 |
0.669 |
0.652 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
2 |
5 |
no |
no |
PF05722 |
P22020 |
185-397 |
nD2 |
116-260 |
145 |
e4xrmB1 |
4XRM |
101.1.1 |
0.873 |
0.682 |
0.95 |
2.8|3.0|1 |
0.962 |
1.986 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
7 |
0 |
no |
no |
PF05727 |
P61935 |
55-177 |
nD2 |
26-65,136-175 |
80 |
e1i1gA2 |
1I1G |
304.4.1 |
0.948 |
0.0 |
0.0 |
7.4|7.7|0 |
0.796 |
0.727 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
2 |
4 |
yes:out |
no |
PF05727 |
Q12Y32 |
268-395 |
nD3 |
236-399 |
164 |
e6tpiB1 |
6TPI |
304.4.1 |
0.913 |
0.0 |
0.0 |
7.3|8.5|0 |
0.925 |
1.491 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
5 |
7 |
yes:out |
no |
PF05766 |
B0USX4 |
3-189 |
nD1 |
6-35 |
30 |
e2aklA2 |
2AKL |
375.1.1 |
0.898 |
0.731 |
0.618 |
0.0|3.5|0 |
0.684 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
no |
PF05781 |
Q12912 |
24-555 |
nD1 |
206-320 |
115 |
e5n9jZ1 |
5N9J |
3559.1.1 |
0.892 |
0.0 |
0.0 |
7.8|8.4|0 |
0.712 |
0.958 |
pymol |
more |
good_domain |
a+b complex topology |
Mediator of RNA polymerase II transcription subunit 22 |
Mediator of RNA polymerase II transcription subunit 22 |
Mediator of RNA polymerase II transcription subunit 22 |
3 |
0 |
no |
yes:out |
PF05792 |
M3JSJ2 |
47-76 |
nD2 |
46-110 |
65 |
e5tu9A3 |
5TU9 |
706.2.1 |
0.893 |
0.0 |
0.0 |
2.1|2.1|1 |
0.705 |
0.823 |
pymol |
more |
good_domain |
beta complex topology |
Head domain of nucleotide exchange factor GrpE |
G5 and E repeats in surface protein G |
G5 and E repeats in surface protein G |
0 |
6 |
no |
no |
PF05794 |
M3IQR6 |
232-692 |
nD3 |
511-585 |
75 |
e3vkgA8 |
3VKG |
148.1.3 |
0.923 |
0.0 |
0.0 |
4.2|4.2|1 |
0.554 |
0.806 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
2 |
no |
no |
PF05797 |
A0A0F7PZ47 |
2-336 |
nD2 |
131-205,286-370 |
160 |
e6expF1 |
6EXP |
331.15.1 |
0.863 |
0.0 |
0.0 |
4.8|4.8|1 |
0.914 |
1.616 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Anti-CRISPR protein AcrID1 |
Anti-CRISPR protein AcrID1 |
5 |
5 |
no |
no |
PF05805 |
A0A3B5QEC0 |
1-186 |
nD1 |
6-180 |
175 |
e6wvdA2 |
6WVD |
174.1.1 |
0.872 |
0.0 |
0.0 |
11.2|11.4|0 |
0.866 |
1.199 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
6 |
0 |
no |
yes:3 |
PF05810 |
A0A2V3ZMN7 |
4-55 |
nD1 |
11-45 |
35 |
e2aklA2 |
2AKL |
375.1.1 |
0.943 |
0.965 |
0.979 |
0.0|0.0|1 |
0.816 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
1 |
no |
no |
PF05810 |
A0A0H3JLY3 |
12-68 |
nD1 |
16-54 |
39 |
e2aklA2 |
2AKL |
375.1.1 |
0.94 |
0.926 |
0.917 |
0.0|2.1|0 |
0.658 |
0.696 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
1 |
no |
no |
PF05811 |
H3BEQ8 |
5-131 |
nD2 |
6-25,66-135 |
90 |
e5jsbB1 |
5JSB |
310.2.1 |
0.918 |
0.0 |
0.0 |
7.6|9.3|0 |
0.724 |
0.489 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
3 |
0 |
no |
no |
PF05816 |
R5CRM6 |
62-388 |
nD1 |
51-85,201-255 |
90 |
e4tkoB3 |
4TKO |
5086.1.1 |
0.914 |
0.0 |
0.0 |
9.5|10.7|0 |
0.378 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
4 |
0 |
no |
no |
PF05816 |
R5CRM6 |
62-388 |
nD2 |
86-200,256-305 |
165 |
e4wheA1 |
4WHE |
3291.1.1 |
0.945 |
0.825 |
0.463 |
8.6|10.7|0 |
0.481 |
0.938 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
4 |
0 |
no |
no |
PF05819 |
A4XNU1 |
115-539 |
nD2 |
221-305,416-425 |
95 |
e1nyaA1 |
1NYA |
108.1.1 |
0.906 |
0.755 |
0.946 |
2.2|2.2|1 |
0.752 |
1.067 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
2 |
no |
no |
PF05819 |
Q5H6V0 |
308-741 |
nD2 |
281-395 |
115 |
e4p60B1 |
4P60 |
108.1.1 |
0.929 |
0.0 |
0.0 |
2.5|3.3|0 |
0.921 |
1.292 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
2 |
no |
no |
PF05819 |
Q5H6V0 |
308-741 |
nD3 |
396-495,611-625 |
115 |
e7pjdB1 |
7PJD |
108.1.1 |
0.911 |
0.564 |
0.843 |
2.6|2.6|1 |
0.752 |
1.292 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
3 |
no |
no |
PF05832 |
A0A5B8MLZ7 |
5-145 |
nD1 |
6-150 |
145 |
e1fioA1 |
1FIO |
603.1.1 |
0.925 |
0.0 |
0.0 |
9.7|9.7|1 |
0.809 |
1.381 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
2 |
no |
yes:3 |
PF05832 |
A0A7S3FN90 |
7-145 |
nD1 |
6-65,81-170 |
150 |
e4x5mC1 |
4X5M |
6155.1.1 |
0.867 |
0.0 |
0.0 |
6.6|8.8|0 |
0.92 |
1.714 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TOG superfamily |
SWEET transporter |
SWEET transporter |
5 |
1 |
no |
yes:3 |
PF05840 |
A0A0K8JJV3 |
74-355 |
nD1 |
16-160,436-460 |
170 |
e5xnsA1 |
5XNS |
3922.1.1 |
0.916 |
0.0 |
0.0 |
7.8|7.8|1 |
0.818 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
8 |
0 |
no |
no |
PF05910 |
W1NTI2 |
25-299 |
nD1 |
26-155 |
130 |
e3mx7A1 |
3MX7 |
3459.1.1 |
0.949 |
0.0 |
0.0 |
4.7|4.7|1 |
0.969 |
1.453 |
pymol |
more |
good_domain |
beta sandwiches |
Fas apoptotic inhibitory molecule |
Fas apoptotic inhibitory molecule |
Fas apoptotic inhibitory molecule |
1 |
10 |
no |
no |
PF05910 |
F6HI45 |
26-298 |
nD1 |
26-160 |
135 |
e3mx7A1 |
3MX7 |
3459.1.1 |
0.938 |
0.0 |
0.0 |
3.8|3.8|1 |
0.969 |
1.508 |
pymol |
more |
good_domain |
beta sandwiches |
Fas apoptotic inhibitory molecule |
Fas apoptotic inhibitory molecule |
Fas apoptotic inhibitory molecule |
1 |
10 |
no |
no |
PF05911 |
W1P822 |
80-907 |
nD4 |
596-675 |
80 |
e1u00A2 |
1U00 |
632.7.1 |
0.927 |
0.0 |
0.0 |
8.6|8.6|1 |
0.753 |
0.769 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
3 |
0 |
no |
no |
PF05917 |
O25799 |
1-385 |
nD2 |
66-120,126-160 |
90 |
e5szgA1 |
5SZG |
192.29.1 |
0.936 |
0.0 |
0.0 |
7.6|7.6|1 |
0.882 |
1.184 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
no |
PF05928 |
P93803 |
1-207 |
nD1 |
6-135 |
130 |
e4j2cC1 |
4J2C |
603.1.1 |
0.93 |
0.0 |
0.0 |
10.2|10.6|0 |
0.893 |
1.238 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
no |
PF05929 |
D3VKM7 |
5-265 |
nD1 |
1-125 |
125 |
e6kz4B3 |
6KZ4 |
1.1.16 |
0.873 |
0.0 |
0.0 |
2.9|7.1|0 |
0.856 |
1.092 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Mammalian cell entry (MCE) domain |
2 |
8 |
no |
no |
PF05929 |
W0L451 |
5-276 |
nD1 |
1-175 |
175 |
e5jblC1 |
5JBL |
50.1.1 |
0.928 |
0.592 |
0.495 |
7.1|7.1|1 |
0.622 |
0.768 |
pymol |
more |
good_domain |
beta barrels |
Herpes virus serine proteinase, assemblin |
Herpes virus serine proteinase, assemblin |
Herpes virus serine proteinase, assemblin |
3 |
9 |
no |
no |
PF05961 |
A0A239KVT8 |
7-65 |
nD1 |
36-115 |
80 |
e2m3xB1 |
2M3X |
5.1.10 |
0.879 |
0.0 |
0.0 |
5.5|6.2|0 |
0.819 |
1.111 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
0 |
8 |
no |
yes:out |
PF05975 |
Q74I97 |
2-379 |
nD1 |
1-235 |
235 |
e7jr7B2 |
7JR7 |
1075.1.1 |
0.913 |
0.0 |
0.0 |
6.7|6.7|1 |
0.709 |
0.911 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
ABCG5/ABCG8 transmembrane domain |
8 |
2 |
no |
yes:6 |
PF05975 |
Q74I97 |
2-379 |
nD2 |
246-400 |
155 |
e5k7vC1 |
5K7V |
601.1.1 |
0.899 |
0.0 |
0.0 |
9.1|9.1|1 |
0.922 |
1.183 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
0 |
no |
yes:4 |
PF05975 |
Q1G996 |
2-377 |
nD1 |
1-240 |
240 |
e6mjpF2 |
6MJP |
1075.1.1 |
0.887 |
0.0 |
0.0 |
7.2|7.2|1 |
0.687 |
0.93 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
ABCG5/ABCG8 transmembrane domain |
8 |
1 |
no |
yes:6 |
PF05975 |
Q1G996 |
2-377 |
nD2 |
241-400 |
160 |
e7rdrC2 |
7RDR |
109.3.1 |
0.886 |
0.0 |
0.0 |
7.2|7.2|1 |
0.426 |
0.804 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
0 |
no |
yes:4 |
PF05975 |
A0A1H9AWV2 |
4-383 |
nD2 |
1-25,56-240 |
210 |
e7r8eA2 |
7R8E |
1075.1.1 |
0.903 |
0.0 |
0.0 |
7.1|7.1|1 |
0.686 |
0.814 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
ABCG5/ABCG8 transmembrane domain |
7 |
0 |
no |
yes:6 |
PF06008 |
F1LTF8 |
291-547 |
nD5 |
266-400,436-525,531-565,576-600,621-795 |
460 |
e3kbtB5 |
3KBT |
604.1.1 |
0.916 |
0.973 |
0.953 |
6.3|8.9|0 |
0.734 |
4.182 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
9 |
0 |
yes:out |
no |
PF06011 |
J4KQ45 |
204-710 |
nD3 |
196-290,346-400,421-485,556-715 |
375 |
e7en0B1 |
7EN0 |
109.37.1 |
0.918 |
0.546 |
0.0 |
6.6|6.6|1 |
0.58 |
1.181 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Anion channel SLAC1-related |
Anion channel SLAC1-related |
14 |
1 |
yes:out |
yes:9 |
PF06011 |
F9XAJ7 |
202-726 |
nD3 |
196-290,356-405,431-490,571-730 |
365 |
e6m31B1 |
6M31 |
141.1.1 |
0.868 |
0.0 |
0.0 |
6.7|7.0|0 |
0.575 |
1.166 |
pymol |
more |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
15 |
1 |
yes:out |
yes:9 |
PF06039 |
Q9HVF1 |
7-494 |
nD1 |
61-90,116-180,271-320,356-395 |
185 |
e4x9mA2 |
4X9M |
244.1.1 |
0.949 |
0.999 |
0.983 |
4.8|25.3|0 |
0.775 |
1.713 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
FAD-linked reductases-C |
FAD-linked reductases-C |
6 |
8 |
no |
no |
PF06045 |
A0A4V3WM49 |
5-205 |
nD1 |
6-335 |
330 |
e5kbpA5 |
5KBP |
12.3.1 |
0.912 |
0.0 |
1.0 |
16.0|24.2|1 |
0.925 |
1.174 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
3 |
21 |
no |
no |
PF06045 |
A0A5N5HLB9 |
4-200 |
nD1 |
6-325 |
320 |
e5kbpA5 |
5KBP |
12.3.1 |
0.917 |
0.0 |
1.0 |
16.2|24.6|1 |
0.922 |
1.139 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
3 |
20 |
no |
no |
PF06045 |
K7KU45 |
5-200 |
nD1 |
6-325 |
320 |
e5wzqA2 |
5WZQ |
12.3.1 |
0.892 |
0.0 |
1.0 |
16.0|24.4|1 |
0.935 |
1.139 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
3 |
20 |
no |
no |
PF06059 |
Q92S18 |
29-127 |
nD1 |
36-125 |
90 |
e4lziA2 |
4LZI |
243.3.1 |
0.925 |
0.0 |
0.0 |
7.1|7.1|1 |
0.874 |
0.9 |
pymol |
na |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
5 |
yes:out |
no |
PF06059 |
A0A7R6YMS4 |
20-117 |
nD1 |
1-115 |
115 |
e4lziA2 |
4LZI |
243.3.1 |
0.888 |
0.0 |
0.0 |
6.3|6.6|1 |
0.841 |
1.15 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
5 |
no |
no |
PF06062 |
Q087T6 |
1-120 |
nD1 |
1-123 |
123 |
e2nvnA1 |
2NVN |
295.1.1 |
0.944 |
0.0 |
0.0 |
5.0|6.3|1 |
0.771 |
1.008 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
6 |
no |
no |
PF06062 |
Q5E2U7 |
1-119 |
nD1 |
1-120 |
120 |
e2nvnA1 |
2NVN |
295.1.1 |
0.945 |
0.0 |
0.0 |
5.4|6.1|1 |
0.764 |
0.984 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
4 |
6 |
no |
no |
PF06073 |
A0A3D5UUM7 |
50-154 |
nD1 |
1-170 |
170 |
e3ctlB1 |
3CTL |
2002.1.1 |
0.947 |
0.842 |
0.91 |
12.2|12.2|1 |
0.681 |
0.543 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
6 |
8 |
no |
no |
PF06073 |
A0A2D8RZJ5 |
50-154 |
nD1 |
1-170 |
170 |
e3ctlB1 |
3CTL |
2002.1.1 |
0.945 |
0.842 |
0.91 |
12.1|12.4|1 |
0.665 |
0.543 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
6 |
8 |
no |
no |
PF06074 |
B8GS20 |
3-514 |
nD1 |
131-205 |
75 |
e4zjnA2 |
4ZJN |
4056.1.1 |
0.94 |
1.0 |
0.984 |
3.9|4.3|1 |
0.811 |
0.926 |
pymol |
more |
good_domain |
beta barrels |
Barrel domain in upper collar protein |
Barrel domain in upper collar protein |
Barrel domain in upper collar protein |
2 |
4 |
no |
no |
PF06074 |
M5DP55 |
5-542 |
nD3 |
481-540 |
60 |
e2jvhA1 |
2JVH |
604.23.1 |
0.913 |
0.0 |
0.0 |
5.6|5.6|1 |
0.833 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Sbi complement-binding domain |
Sbi complement-binding domain |
3 |
0 |
no |
no |
PF06082 |
A0A1V5E905 |
2-624 |
nD1 |
1-220 |
220 |
e4pr7A1 |
4PR7 |
5084.5.1 |
0.87 |
0.0 |
0.716 |
16.2|16.2|1 |
0.71 |
0.598 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
12 |
no |
no |
PF06102 |
A0A0K0E8P6 |
3-161 |
nD1 |
41-160 |
120 |
e2lf0A1 |
2LF0 |
3331.1.1 |
0.932 |
0.679 |
0.284 |
4.1|4.4|0 |
0.608 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Uncharacterized protein yibL |
Uncharacterized protein yibL |
Uncharacterized protein yibL |
5 |
0 |
no |
no |
PF06123 |
F0S562 |
17-454 |
nD1 |
66-310 |
245 |
e4g2aA1 |
4G2A |
4081.1.1 |
0.948 |
0.604 |
0.868 |
11.5|11.5|1 |
0.701 |
1.184 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
2 |
14 |
yes:out |
yes:out |
PF06123 |
F0S562 |
17-454 |
nD2 |
21-65,311-450 |
185 |
e4rh7A13 |
4RH7 |
148.1.3 |
0.941 |
0.0 |
0.0 |
7.4|8.4|0 |
0.939 |
1.989 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
0 |
yes:in |
yes:5 |
PF06123 |
D7DKG0 |
5-439 |
nD1 |
51-295 |
245 |
e4g2aA1 |
4G2A |
4081.1.1 |
0.944 |
0.6 |
0.895 |
12.4|12.4|1 |
0.701 |
1.184 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
3 |
15 |
no |
yes:out |
PF06123 |
D7DKG0 |
5-439 |
nD2 |
6-45,296-435 |
180 |
e2jswA1 |
2JSW |
601.1.2 |
0.939 |
0.0 |
0.0 |
6.8|7.2|0 |
0.827 |
1.091 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
0 |
no |
yes:6 |
PF06139 |
A0A3L7X9U1 |
1-129 |
nD1 |
1-130 |
130 |
e5tcxA2 |
5TCX |
174.1.1 |
0.868 |
0.0 |
0.0 |
10.4|10.4|1 |
0.931 |
0.89 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF06146 |
A0A0A2VXK3 |
1087-1192 |
nD7 |
1091-1190 |
100 |
e4kisA2 |
4KIS |
375.1.9 |
0.927 |
0.0 |
0.0 |
5.9|6.0|0 |
0.678 |
0.505 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Zinc-nucleated domain of serine integrase |
4 |
0 |
yes:out |
yes:3 |
PF06151 |
P83296 |
49-448 |
nD2 |
56-435 |
380 |
e4jeuB1 |
4JEU |
603.1.1 |
0.883 |
0.0 |
0.0 |
4.9|5.7|0 |
0.898 |
3.619 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
10 |
0 |
no |
yes:8 |
PF06151 |
D6WK40 |
4-384 |
nD2 |
6-150,186-380 |
340 |
e2xheB4 |
2XHE |
603.1.1 |
0.933 |
0.0 |
0.0 |
5.8|6.0|0 |
0.889 |
3.238 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
9 |
0 |
yes:in |
yes:5 |
PF06152 |
A0A858BT47 |
2-356 |
nD3 |
296-370 |
75 |
e2uwjE1 |
2UWJ |
3812.1.1 |
0.937 |
0.0 |
0.0 |
6.2|6.2|1 |
0.878 |
1.136 |
pymol |
more |
good_domain |
alpha bundles |
Type III secretion protein YscE |
Type III secretion protein YscE |
Type III secretion protein YscE |
2 |
2 |
no |
no |
PF06152 |
C3AW14 |
3-347 |
nD1 |
1-80,111-210,256-270,296-360 |
260 |
e4uosA1 |
4UOS |
601.19.1 |
0.941 |
0.0 |
0.0 |
8.9|8.9|1 |
0.88 |
1.079 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
7 |
2 |
no |
no |
PF06157 |
Q97Y98 |
7-306 |
nD2 |
6-35,71-215 |
175 |
e6egcA1 |
6EGC |
192.29.1 |
0.948 |
0.0 |
0.0 |
8.9|8.9|1 |
0.918 |
2.303 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
yes:5 |
PF06170 |
A0A518DNI6 |
24-107 |
nD1 |
1-115 |
115 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.892 |
0.0 |
0.0 |
5.1|5.1|1 |
0.676 |
1.307 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
3 |
0 |
no |
yes:2 |
PF06186 |
E3I807 |
16-151 |
nD1 |
26-150 |
125 |
e4csbA1 |
4CSB |
3863.1.1 |
0.945 |
0.0 |
0.276 |
9.1|9.1|1 |
0.947 |
1.106 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
0 |
8 |
yes:out |
no |
PF06186 |
A6X237 |
35-171 |
nD1 |
41-174 |
134 |
e5uc0A1 |
5UC0 |
3863.1.1 |
0.949 |
0.867 |
0.339 |
7.3|7.3|1 |
0.818 |
1.186 |
pymol |
na |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
1 |
8 |
yes:out |
no |
PF06186 |
A0A849MHW1 |
19-159 |
nD1 |
31-165 |
135 |
e5uc0A1 |
5UC0 |
3863.1.1 |
0.949 |
0.843 |
0.352 |
6.2|7.9|1 |
0.808 |
1.195 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
1 |
6 |
yes:out |
no |
PF06191 |
D7A469 |
13-150 |
nD1 |
31-165 |
135 |
e4nw4A2 |
4NW4 |
9.1.1 |
0.851 |
0.63 |
0.874 |
5.8|8.1|1 |
0.647 |
0.882 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
4 |
9 |
yes:out |
no |
PF06191 |
B9JNE5 |
24-163 |
nD1 |
46-170 |
125 |
e4nw4A2 |
4NW4 |
9.1.1 |
0.908 |
0.686 |
0.878 |
4.0|5.9|1 |
0.719 |
0.817 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
8 |
yes:out |
no |
PF06196 |
B8F881 |
6-76 |
nD1 |
6-70 |
65 |
e5jjeB1 |
5JJE |
5043.1.1 |
0.861 |
0.0 |
0.0 |
6.4|6.4|1 |
0.841 |
1.032 |
pymol |
more |
good_domain |
extended segments |
Sensor proteins transmembrane domains |
Htr2 transmembrane domain-like |
Htr2 transmembrane domain-like |
2 |
1 |
no |
yes:2 |
PF06196 |
A0A520MMC7 |
6-73 |
nD1 |
1-85 |
85 |
e4i0xF1 |
4I0X |
150.5.1 |
0.925 |
0.0 |
0.0 |
6.9|8.2|0 |
0.951 |
0.914 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
ESAT-6 like |
ESAT-6 like |
2 |
1 |
no |
yes:2 |
PF06196 |
A0A1Q2C3P5 |
12-84 |
nD1 |
6-80 |
75 |
e5ijiA3 |
5IJI |
5043.2.1 |
0.932 |
0.0 |
0.0 |
6.5|6.8|0 |
0.968 |
1.19 |
pymol |
more |
good_domain |
extended segments |
Sensor proteins transmembrane domains |
NarQ transmembrane domain |
NarQ transmembrane domain |
2 |
1 |
no |
yes:2 |
PF06207 |
A0A806DXP0 |
37-275 |
nD1 |
31-170 |
140 |
e6teqC2 |
6TEQ |
212.1.1 |
0.872 |
0.0 |
0.225 |
4.4|4.6|1 |
0.677 |
0.972 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
4 |
5 |
yes:out |
no |
PF06207 |
A0A806DXP0 |
37-275 |
nD2 |
171-290 |
120 |
e6orbA9 |
6ORB |
148.1.3 |
0.897 |
0.0 |
0.736 |
4.3|4.8|0 |
0.742 |
1.29 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
0 |
yes:out |
no |
PF06210 |
K9UD25 |
44-143 |
nD1 |
31-145 |
115 |
e5fd9A1 |
5FD9 |
3291.1.1 |
0.887 |
0.0 |
0.0 |
4.7|4.8|0 |
0.866 |
0.653 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
3 |
0 |
no |
yes:2 |
PF06213 |
Q5FUZ6 |
36-313 |
nD1 |
36-239 |
204 |
e6aitA1 |
6AIT |
2498.1.1 |
0.889 |
0.409 |
0.723 |
4.2|4.9|0 |
0.467 |
0.813 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
8 |
2 |
no |
no |
PF06219 |
K3ZT01 |
1-462 |
nD1 |
6-18,41-190 |
163 |
e4icwA1 |
4ICW |
11.2.1 |
0.941 |
0.862 |
0.706 |
6.3|7.2|1 |
0.876 |
1.156 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
2 |
8 |
no |
no |
PF06219 |
U5CVT2 |
1-447 |
nD1 |
6-160 |
155 |
e6ewlA1 |
6EWL |
11.2.1 |
0.941 |
0.863 |
0.748 |
9.6|9.6|1 |
0.863 |
1.099 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
1 |
8 |
no |
no |
PF06226 |
A0A2U2GZJ8 |
22-223 |
nD1 |
36-224 |
189 |
e6nfqB1 |
6NFQ |
11.1.1 |
0.878 |
0.418 |
0.114 |
5.0|8.8|0 |
0.889 |
1.75 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
9 |
yes:out |
no |
PF06226 |
E0SAY6 |
32-234 |
nD1 |
46-235 |
190 |
e2ra1A4 |
2RA1 |
11.1.1 |
0.898 |
0.0 |
0.0 |
5.2|8.5|0 |
0.886 |
1.759 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
10 |
yes:out |
no |
PF06233 |
W8S7S5 |
9-88 |
nD1 |
6-70 |
65 |
e6zj3Lg2 |
6ZJ3 |
3115.1.1 |
0.886 |
0.0 |
0.0 |
4.4|4.9|1 |
0.762 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF06233 |
Q1GH02 |
9-87 |
nD1 |
6-80 |
75 |
e5xy3S2 |
5XY3 |
3115.1.1 |
0.944 |
0.0 |
0.0 |
4.9|4.9|1 |
0.756 |
0.962 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF06233 |
B6JHW9 |
23-102 |
nD1 |
21-85 |
65 |
e5xxbR2 |
5XXB |
3115.1.1 |
0.928 |
0.0 |
0.0 |
4.1|4.6|1 |
0.864 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF06239 |
H3CG44 |
85-262 |
nD1 |
71-225 |
155 |
e4leuA1 |
4LEU |
109.4.1 |
0.933 |
0.972 |
0.978 |
5.2|7.7|0 |
0.721 |
0.542 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
no |
PF06239 |
E9HFW4 |
58-232 |
nD1 |
61-185 |
125 |
e4leuA1 |
4LEU |
109.4.1 |
0.906 |
0.96 |
0.975 |
6.1|8.6|0 |
0.684 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF06242 |
A0A4P7W776 |
34-170 |
nD1 |
1-80 |
80 |
e6dxoA2 |
6DXO |
101.1.1 |
0.945 |
0.0 |
0.0 |
2.8|3.3|0 |
0.901 |
1.096 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF06242 |
A0A2D7RPC7 |
35-172 |
nD1 |
6-80 |
75 |
e1tc3C1 |
1TC3 |
101.1.1 |
0.944 |
0.0 |
0.272 |
2.6|2.9|1 |
0.933 |
1.027 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF06252 |
B8F588 |
18-129 |
nD2 |
66-130 |
65 |
e6m9kD1 |
6M9K |
829.1.1 |
0.933 |
0.593 |
0.741 |
7.6|7.6|1 |
0.885 |
0.625 |
pymol |
na |
good_domain |
a+b duplicates or obligate multimers |
NinB |
NinB |
NinB |
3 |
0 |
no |
no |
PF06252 |
B1Y428 |
26-146 |
nD2 |
86-145 |
60 |
e6m9kD1 |
6M9K |
829.1.1 |
0.855 |
0.302 |
0.697 |
5.1|6.0|1 |
0.74 |
0.577 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
NinB |
NinB |
NinB |
3 |
0 |
no |
no |
PF06252 |
Q3A8F2 |
27-140 |
nD2 |
81-140 |
60 |
e6m9kD1 |
6M9K |
829.1.1 |
0.936 |
0.629 |
0.643 |
6.6|6.6|1 |
0.809 |
0.577 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
NinB |
NinB |
NinB |
3 |
0 |
no |
no |
PF06260 |
A0A290QDD8 |
1-81 |
nD1 |
1-80 |
80 |
e1cxzB1 |
1CXZ |
192.5.1 |
0.873 |
0.0 |
0.0 |
5.7|5.7|1 |
0.817 |
0.874 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
HR1 repeat |
HR1 repeat |
3 |
0 |
no |
no |
PF06260 |
A0A7U8SPW0 |
1-82 |
nD1 |
1-80 |
80 |
e1cxzB1 |
1CXZ |
192.5.1 |
0.873 |
0.0 |
0.0 |
5.6|5.6|1 |
0.817 |
0.874 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
HR1 repeat |
HR1 repeat |
3 |
0 |
no |
no |
PF06271 |
A0A233VXD3 |
9-163 |
nD1 |
6-169 |
164 |
e6lo8D1 |
6LO8 |
5069.1.3 |
0.913 |
0.0 |
0.0 |
4.4|4.9|0 |
0.903 |
1.271 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
4 |
2 |
no |
yes:4 |
PF06289 |
A0A0U4GEJ8 |
1-58 |
nD1 |
1-65 |
65 |
e3d6wB1 |
3D6W |
4.8.1 |
0.947 |
0.756 |
0.805 |
4.1|5.0|1 |
0.903 |
0.985 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromo domain-like |
Chromo domain-like |
2 |
4 |
no |
no |
PF06313 |
B4H747 |
31-119 |
nD2 |
31-120 |
90 |
e6dlmA1 |
6DLM |
4992.1.1 |
0.858 |
0.0 |
0.0 |
5.4|5.4|1 |
0.878 |
1.475 |
pymol |
more |
good_domain |
extended segments |
RelB-like |
RelB-like |
RelB-like |
3 |
0 |
yes:out |
no |
PF06313 |
A0A6P4L9E8 |
30-117 |
nD1 |
31-115 |
85 |
e3layJ1 |
3LAY |
3711.1.1 |
0.892 |
0.0 |
0.0 |
6.0|6.0|1 |
0.801 |
0.766 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
3 |
0 |
yes:out |
no |
PF06323 |
A0A1J7CN07 |
2-218 |
nD1 |
1-15,76-110,211-220 |
60 |
e6p18Q1 |
6P18 |
101.1.1 |
0.94 |
0.0 |
0.381 |
5.3|5.3|1 |
0.421 |
0.822 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF06338 |
K0IWZ8 |
6-158 |
nD1 |
6-155 |
150 |
e3bs1A1 |
3BS1 |
4.8.1 |
0.853 |
0.0 |
0.747 |
2.8|3.4|0 |
0.969 |
2.273 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromo domain-like |
Chromo domain-like |
4 |
8 |
no |
no |
PF06338 |
A0A7C8KS14 |
2-144 |
nD1 |
1-145 |
145 |
e3bs1A1 |
3BS1 |
4.8.1 |
0.883 |
0.0 |
0.666 |
3.4|3.5|0 |
0.98 |
2.197 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromo domain-like |
Chromo domain-like |
5 |
6 |
no |
no |
PF06348 |
D3FEG6 |
1-56 |
nD1 |
1-58 |
58 |
e2yztA1 |
2YZT |
4100.1.1 |
0.854 |
0.375 |
0.348 |
3.3|3.3|1 |
0.679 |
0.699 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
TTHA1013/TTHA0281-like |
TTHA1013/TTHA0281-like |
TTHA1013/TTHA0281-like |
3 |
3 |
no |
no |
PF06350 |
A0A0C9QX50 |
12-317 |
nD1 |
6-175 |
170 |
e6xssD1 |
6XSS |
109.3.1 |
0.891 |
0.0 |
0.0 |
10.7|10.7|1 |
0.611 |
0.854 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
2 |
no |
no |
PF06353 |
R6QVV5 |
42-170 |
nD1 |
16-110 |
95 |
e6zu5LOO1 |
6ZU5 |
375.1.1 |
0.949 |
0.0 |
0.971 |
4.0|4.0|1 |
0.756 |
1.696 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
4 |
4 |
no |
no |
PF06365 |
A0A6Q2XYW8 |
169-378 |
nD2 |
156-260 |
105 |
e6c10A2 |
6C10 |
11.1.1 |
0.877 |
0.0 |
0.0 |
8.1|10.0|0 |
0.728 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
5 |
yes:out |
yes:out |
PF06419 |
C1EEF9 |
33-146 |
nD1 |
26-300,346-685 |
615 |
e5y5aA1 |
5Y5A |
109.4.1 |
0.864 |
0.0 |
0.999 |
6.5|17.6|1 |
0.438 |
2.15 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
17 |
0 |
no |
no |
PF06430 |
A0A2R8A4U8 |
2-106 |
nD1 |
11-105 |
95 |
e4xgcD2 |
4XGC |
148.1.3 |
0.878 |
0.0 |
0.181 |
4.4|4.5|0 |
0.847 |
1.022 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
0 |
no |
no |
PF06430 |
A0A2R8A4V7 |
2-106 |
nD1 |
11-105 |
95 |
e4xgcD2 |
4XGC |
148.1.3 |
0.879 |
0.0 |
0.178 |
4.3|4.4|0 |
0.847 |
1.022 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
0 |
no |
no |
PF06432 |
E9HC77 |
12-267 |
nD1 |
46-250 |
205 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.894 |
0.0 |
0.0 |
5.5|5.5|1 |
0.827 |
1.242 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
7 |
0 |
no |
yes:8 |
PF06462 |
H3AXP5 |
301-330 |
nD2 |
1-60,171-380,546-570 |
295 |
e5fsbA1 |
5FSB |
5.1.4 |
0.885 |
0.988 |
0.993 |
19.3|23.4|1 |
0.916 |
0.822 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
22 |
no |
no |
PF06462 |
A0A3B4TLY6 |
253-280 |
nD2 |
1-65,171-365 |
260 |
e4ruqB1 |
4RUQ |
5.1.4 |
0.907 |
0.997 |
0.996 |
23.1|23.1|1 |
0.916 |
0.724 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
18 |
no |
no |
PF06488 |
A0A154VWR2 |
1-217 |
nD1 |
6-50,71-215 |
190 |
e6j0nr1 |
6J0N |
1.1.5 |
0.923 |
0.0 |
0.078 |
9.1|9.1|1 |
0.93 |
1.121 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel |
2 |
9 |
no |
no |
PF06488 |
A0A2A5RIG2 |
1-220 |
nD1 |
11-190 |
180 |
e6j0nr1 |
6J0N |
1.1.5 |
0.918 |
0.0 |
0.0 |
8.2|8.2|1 |
0.917 |
1.062 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel |
1 |
8 |
no |
no |
PF06510 |
Q8U3X7 |
41-188 |
nD1 |
46-200 |
155 |
e3q48A2 |
3Q48 |
11.1.1 |
0.947 |
0.931 |
0.781 |
5.7|7.2|1 |
0.787 |
1.435 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
9 |
yes:out |
no |
PF06510 |
O28198 |
38-184 |
nD1 |
46-190 |
145 |
e2pr9A2 |
2PR9 |
11.1.5 |
0.935 |
0.0 |
0.0 |
5.6|7.5|0 |
0.846 |
0.942 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
1 |
9 |
yes:out |
no |
PF06510 |
A0A7C6MSR8 |
51-175 |
nD2 |
26-175 |
150 |
e3jwnG1 |
3JWN |
11.1.5 |
0.927 |
0.0 |
0.217 |
6.5|7.4|0 |
0.85 |
0.974 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
0 |
10 |
yes:out |
no |
PF06524 |
E0VGY6 |
1-313 |
nD1 |
36-120,143-235 |
178 |
e1yc5A1 |
1YC5 |
375.1.1 |
0.881 |
0.0 |
0.928 |
2.5|3.1|1 |
0.942 |
3.179 |
pymol |
na |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
5 |
9 |
no |
no |
PF06524 |
B7QNY2 |
1-301 |
nD1 |
31-120 |
90 |
e5v3jF2 |
5V3J |
386.1.1 |
0.874 |
0.986 |
0.974 |
0.0|0.0|1 |
1.0 |
2.727 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
4 |
5 |
no |
no |
PF06524 |
B7QNY2 |
1-301 |
nD3 |
171-225 |
55 |
e4n0nA1 |
4N0N |
376.1.1 |
0.936 |
0.0 |
0.0 |
3.3|3.3|1 |
0.795 |
0.705 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
1 |
3 |
no |
no |
PF06524 |
G3HJ64 |
1-302 |
nD2 |
171-225 |
55 |
e2d8vA1 |
2D8V |
904.1.1 |
0.942 |
0.0 |
0.0 |
3.8|3.8|1 |
0.89 |
1.078 |
pymol |
more |
good_domain |
few secondary structure elements |
B-box zinc-binding domain-like |
B-box zinc-binding domain |
B-box zinc-binding domain |
1 |
3 |
no |
no |
PF06531 |
A0A380GBI5 |
1-80 |
nD1 |
1-85 |
85 |
e6d7kH1 |
6D7K |
7089.1.1 |
0.877 |
0.0 |
0.0 |
5.3|5.3|1 |
0.941 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
2 |
4 |
no |
no |
PF06531 |
A0A512QGG2 |
1-85 |
nD1 |
1-85 |
85 |
e6d7kH1 |
6D7K |
7089.1.1 |
0.891 |
0.0 |
0.0 |
5.6|5.6|1 |
0.985 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
2 |
4 |
no |
no |
PF06531 |
A0A1S5ZLB0 |
1-84 |
nD1 |
6-85 |
80 |
e6d7kH1 |
6D7K |
7089.1.1 |
0.888 |
0.0 |
0.0 |
5.9|5.9|1 |
0.912 |
1.176 |
pymol |
more |
good_domain |
a+b two layers |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
2 |
4 |
no |
no |
PF06537 |
Q6MQA2 |
27-502 |
nD2 |
26-150,177-205,231-325,341-500 |
409 |
e6e1cA2 |
6E1C |
107.1.1 |
0.934 |
0.992 |
0.994 |
6.3|7.4|1 |
0.879 |
3.572 |
pymol |
more |
good_domain |
alpha arrays |
Cytochrome c-like |
Cytochrome c |
Cytochrome c |
11 |
11 |
yes:out |
no |
PF06541 |
R5H8W4 |
6-151 |
nD1 |
1-160 |
160 |
e4xu5A1 |
4XU5 |
1015.1.1 |
0.918 |
0.308 |
0.156 |
5.3|5.3|1 |
0.603 |
0.829 |
pymol |
more |
good_domain |
alpha complex topology |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
5 |
1 |
no |
yes:5 |
PF06570 |
Q5M2Q7 |
5-218 |
nD2 |
86-215 |
130 |
e7jz2H1 |
7JZ2 |
5069.1.3 |
0.923 |
0.0 |
0.0 |
6.1|6.1|1 |
0.847 |
1.008 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
4 |
2 |
no |
yes:4 |
PF06600 |
A0A377KNW9 |
2-100 |
nD1 |
6-105 |
100 |
e2rmkB1 |
2RMK |
192.5.1 |
0.947 |
0.0 |
0.0 |
8.0|8.0|1 |
0.926 |
1.093 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
HR1 repeat |
HR1 repeat |
3 |
0 |
no |
no |
PF06610 |
A0A5C5GEX8 |
1-132 |
nD1 |
1-130 |
130 |
e6at7A3 |
6AT7 |
4953.1.1 |
0.888 |
0.0 |
0.0 |
5.5|5.8|0 |
0.779 |
1.52 |
pymol |
more |
good_domain |
alpha arrays |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
4 |
0 |
no |
yes:4 |
PF06610 |
A0A2E4Z6A3 |
1-132 |
nD1 |
1-130 |
130 |
e6at7A3 |
6AT7 |
4953.1.1 |
0.923 |
0.0 |
0.0 |
5.7|5.8|0 |
0.809 |
1.52 |
pymol |
more |
good_domain |
alpha arrays |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
4 |
0 |
no |
yes:4 |
PF06626 |
A0A537ZBA0 |
16-311 |
nD1 |
1-310 |
310 |
e3otgA2 |
3OTG |
7512.1.1 |
0.915 |
0.805 |
0.773 |
6.5|10.9|0 |
0.805 |
1.55 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
13 |
10 |
no |
no |
PF06626 |
A0A538IL70 |
15-311 |
nD1 |
1-314 |
314 |
e3otgA2 |
3OTG |
7512.1.1 |
0.91 |
0.781 |
0.772 |
6.5|10.3|0 |
0.805 |
1.57 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
13 |
10 |
no |
no |
PF06629 |
A0A7W8RUS2 |
2-221 |
nD1 |
1-220 |
220 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.913 |
0.98 |
0.979 |
15.3|15.4|1 |
0.795 |
0.598 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
4 |
12 |
no |
no |
PF06629 |
A0A095B8B4 |
6-224 |
nD1 |
1-224 |
224 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.905 |
0.978 |
0.977 |
14.4|14.6|1 |
0.767 |
0.609 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
12 |
no |
no |
PF06630 |
P15032 |
2-178 |
nD2 |
121-230 |
110 |
e3h4mB1 |
3H4M |
148.1.3 |
0.918 |
0.0 |
0.0 |
3.5|4.4|0 |
0.86 |
1.183 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
6 |
1 |
no |
no |
PF06638 |
D6WAQ1 |
28-556 |
nD3 |
381-480 |
100 |
e5mmmt1 |
5MMM |
604.9.1 |
0.868 |
0.0 |
0.0 |
4.8|4.9|0 |
0.812 |
1.163 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
4 |
0 |
no |
yes:out |
PF06638 |
B7PN71 |
22-569 |
nD1 |
136-280 |
145 |
e5j2lB1 |
5J2L |
627.1.1 |
0.859 |
0.0 |
0.0 |
7.1|7.1|1 |
0.842 |
0.912 |
pymol |
more |
good_domain |
alpha complex topology |
VPS9 domain |
VPS9 domain |
VPS9 domain |
4 |
0 |
no |
yes:4 |
PF06639 |
A0A1D6J0N8 |
25-100 |
nD1 |
71-100 |
30 |
e3bbgA1 |
3BBG |
902.1.1 |
0.908 |
0.845 |
0.845 |
0.0|3.6|0 |
0.575 |
0.75 |
pymol |
more |
good_domain |
few secondary structure elements |
Amb V allergen |
Amb V allergen |
Amb V allergen |
1 |
2 |
yes:out |
no |
PF06639 |
Q9FER1 |
18-93 |
nD1 |
61-95 |
35 |
e3bbgA1 |
3BBG |
902.1.1 |
0.911 |
0.895 |
0.895 |
0.0|3.2|0 |
0.6 |
0.875 |
pymol |
more |
good_domain |
few secondary structure elements |
Amb V allergen |
Amb V allergen |
Amb V allergen |
1 |
2 |
yes:out |
no |
PF06666 |
H5WLM3 |
15-397 |
nD2 |
111-120,146-320 |
185 |
e4gnxX1 |
4GNX |
2.1.1 |
0.941 |
0.0 |
0.0 |
4.6|4.8|1 |
0.89 |
1.779 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
10 |
no |
no |
PF06666 |
H5WLM3 |
15-397 |
nD3 |
321-405 |
85 |
e1ob8B1 |
1OB8 |
2008.1.1 |
0.93 |
0.365 |
0.667 |
4.5|5.7|0 |
0.776 |
0.417 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
1 |
4 |
no |
no |
PF06666 |
Q92ZJ0 |
20-404 |
nD2 |
111-120,146-325 |
190 |
e4gnxX1 |
4GNX |
2.1.1 |
0.938 |
0.0 |
0.0 |
5.1|5.1|1 |
0.898 |
1.827 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
10 |
no |
no |
PF06666 |
A4XE39 |
5-387 |
nD2 |
81-105,131-310 |
205 |
e3oipA1 |
3OIP |
2.1.1 |
0.943 |
0.0 |
0.0 |
4.0|4.6|1 |
0.87 |
1.971 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
11 |
no |
no |
PF06683 |
D7KL67 |
12-221 |
nD1 |
26-200 |
175 |
e6cnzC1 |
6CNZ |
164.1.1 |
0.929 |
0.0 |
0.0 |
7.0|7.0|1 |
0.778 |
1.341 |
pymol |
more |
good_domain |
alpha bundles |
Chorismate mutase II |
Chorismate mutase II |
Chorismate mutase II |
6 |
0 |
no |
yes:2 |
PF06683 |
Q9LK87 |
26-235 |
nD1 |
41-220 |
180 |
e6cnzC1 |
6CNZ |
164.1.1 |
0.938 |
0.0 |
0.0 |
7.0|7.0|1 |
0.789 |
1.379 |
pymol |
more |
good_domain |
alpha bundles |
Chorismate mutase II |
Chorismate mutase II |
Chorismate mutase II |
6 |
0 |
no |
no |
PF06697 |
M4ELN3 |
26-208 |
nD1 |
31-210 |
180 |
e4dloB6 |
4DLO |
12.5.1 |
0.941 |
0.876 |
0.787 |
11.3|11.3|1 |
0.866 |
1.176 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
3 |
12 |
yes:out |
yes:out |
PF06721 |
A0A1P8B782 |
186-405 |
nD1 |
176-200,221-365 |
170 |
e4iloB5 |
4ILO |
3755.3.1 |
0.918 |
0.0 |
0.447 |
4.5|4.7|0 |
0.717 |
0.988 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF06721 |
Q9SVH7 |
303-528 |
nD2 |
346-485 |
140 |
e4iloB5 |
4ILO |
3755.3.1 |
0.942 |
0.0 |
0.284 |
7.1|7.1|1 |
0.758 |
0.814 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:out |
PF06727 |
G4SX63 |
41-373 |
nD2 |
111-373 |
263 |
e1qd5A1 |
1QD5 |
5084.4.1 |
0.9 |
0.963 |
0.966 |
18.4|18.4|1 |
0.798 |
1.023 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Outer membrane phospholipase A (OMPLA) |
Outer membrane phospholipase A (OMPLA) |
2 |
11 |
yes:out |
no |
PF06727 |
F8GER9 |
64-400 |
nD2 |
141-400 |
260 |
e1qd5A1 |
1QD5 |
5084.4.1 |
0.915 |
0.961 |
0.964 |
18.1|18.1|1 |
0.798 |
1.012 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Outer membrane phospholipase A (OMPLA) |
Outer membrane phospholipase A (OMPLA) |
3 |
11 |
yes:out |
no |
PF06727 |
Q2YBC3 |
38-386 |
nD2 |
126-385 |
260 |
e1qd5A1 |
1QD5 |
5084.4.1 |
0.903 |
0.96 |
0.963 |
18.7|18.7|1 |
0.798 |
1.012 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Outer membrane phospholipase A (OMPLA) |
Outer membrane phospholipase A (OMPLA) |
3 |
11 |
yes:out |
no |
PF06746 |
Q9MBG7 |
73-202 |
nD1 |
26-190 |
165 |
e4gehC2 |
4GEH |
601.1.1 |
0.887 |
0.0 |
0.0 |
10.8|10.8|1 |
0.891 |
1.26 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
1 |
yes:out |
no |
PF06746 |
M4EUA8 |
73-211 |
nD1 |
31-185 |
155 |
e4gehC2 |
4GEH |
601.1.1 |
0.899 |
0.0 |
0.0 |
10.2|10.2|1 |
0.881 |
1.183 |
pymol |
na |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
1 |
yes:out |
no |
PF06749 |
W1NG59 |
60-154 |
nD1 |
6-170 |
165 |
e6rkoB2 |
6RKO |
5069.1.1 |
0.936 |
0.0 |
0.0 |
11.4|11.4|1 |
0.825 |
0.778 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
yes:in |
yes:3 |
PF06749 |
I1J867 |
66-159 |
nD2 |
6-40,56-125,141-190 |
155 |
e6rkoB2 |
6RKO |
5069.1.1 |
0.942 |
0.0 |
0.0 |
11.2|11.2|1 |
0.852 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
yes:in |
yes:3 |
PF06762 |
W5JUK3 |
137-613 |
nD1 |
26-295,336-480,646-680 |
450 |
e6p6jB1 |
6P6J |
1075.4.1 |
0.852 |
0.0 |
0.0 |
5.6|5.6|1 |
0.479 |
1.395 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type I ABC exporter transmembrane domain fold |
Type I ABC exporter transmembrane domain fold |
18 |
2 |
no |
yes:10 |
PF06780 |
Q9S035 |
203-342 |
nD1 |
156-340 |
185 |
e6xz3A1 |
6XZ3 |
601.1.1 |
0.876 |
0.0 |
0.0 |
10.1|10.1|1 |
0.887 |
1.412 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
3 |
yes:out |
no |
PF06780 |
H7C7L6 |
204-344 |
nD2 |
186-340 |
155 |
e4iggB3 |
4IGG |
601.1.1 |
0.893 |
0.0 |
0.0 |
9.6|10.5|0 |
0.889 |
1.183 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
3 |
yes:out |
no |
PF06782 |
Q8R6I7 |
28-411 |
nD1 |
6-125,421-430 |
130 |
e5lbmD1 |
5LBM |
3826.1.1 |
0.911 |
0.0 |
0.0 |
7.0|7.0|1 |
0.882 |
1.477 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
4 |
3 |
no |
no |
PF06793 |
A0A4Y9RDR7 |
4-153 |
nD1 |
6-150 |
145 |
e5zwlE1 |
5ZWL |
192.6.1 |
0.865 |
0.0 |
0.0 |
4.2|4.8|0 |
0.967 |
3.021 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
4 |
6 |
no |
no |
PF06793 |
A0A1M6M4D3 |
2-150 |
nD1 |
1-150 |
150 |
e2rdcB1 |
2RDC |
3814.1.1 |
0.858 |
0.615 |
0.754 |
4.7|4.7|1 |
0.591 |
1.111 |
pymol |
more |
good_domain |
alpha bundles |
Uncharacterized protein GSU0061 |
Uncharacterized protein GSU0061 |
Uncharacterized protein GSU0061 |
4 |
6 |
no |
no |
PF06797 |
M6TMZ9 |
10-96 |
nD1 |
6-100 |
95 |
e4it5B4 |
4IT5 |
622.1.1 |
0.899 |
0.0 |
0.0 |
6.0|6.9|0 |
0.888 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
3 |
2 |
no |
yes:3 |
PF06799 |
K9YNH8 |
4-143 |
nD1 |
11-100,121-160 |
130 |
e4p1nB1 |
4P1N |
604.12.1 |
0.94 |
0.0 |
0.0 |
7.7|7.8|0 |
0.948 |
1.503 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
0 |
no |
yes:3 |
PF06799 |
O78501 |
3-139 |
nD1 |
6-95,116-155 |
130 |
e3uumB2 |
3UUM |
604.1.1 |
0.872 |
0.0 |
0.0 |
7.3|8.1|0 |
0.902 |
1.182 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
yes:3 |
PF06799 |
A0A2K8WLP5 |
4-143 |
nD1 |
6-160 |
155 |
e4p1nB1 |
4P1N |
604.12.1 |
0.898 |
0.0 |
0.0 |
7.7|7.8|0 |
0.966 |
1.792 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
2 |
no |
yes:3 |
PF06810 |
R6NIM4 |
14-157 |
nD1 |
6-145 |
140 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.907 |
0.0 |
0.0 |
4.3|4.8|0 |
0.968 |
1.918 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
5 |
1 |
no |
no |
PF06810 |
A5I2J7 |
16-152 |
nD1 |
36-140 |
105 |
e6hdzA2 |
6HDZ |
192.7.1 |
0.916 |
0.672 |
0.542 |
0.0|3.9|0 |
0.439 |
0.938 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
tRNA-binding arm |
tRNA-binding arm |
5 |
2 |
no |
no |
PF06830 |
A0A251SRV8 |
175-231 |
nD1 |
12-215 |
204 |
e7pmvB5 |
7PMV |
6129.1.1 |
0.87 |
0.747 |
0.759 |
14.5|15.6|1 |
0.784 |
1.153 |
pymol |
more |
good_domain |
beta barrels |
Repulsive guidance molecule (RGM) family |
Repulsive guidance molecule (RGM) family |
Repulsive guidance molecule (RGM) family |
1 |
14 |
no |
no |
PF06836 |
Q7N7E2 |
39-133 |
nD1 |
6-125 |
120 |
e7jz2H1 |
7JZ2 |
5069.1.3 |
0.938 |
0.0 |
0.0 |
6.8|6.8|1 |
0.852 |
0.93 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
3 |
2 |
no |
yes:3 |
PF06836 |
A0A7T1M217 |
40-133 |
nD1 |
6-125 |
120 |
e6nbqE1 |
6NBQ |
3843.1.1 |
0.88 |
0.0 |
0.0 |
6.0|6.4|0 |
0.926 |
1.2 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
2 |
no |
yes:3 |
PF06848 |
Q8TNA9 |
815-996 |
nD4 |
806-1000 |
195 |
e4ycgB1 |
4YCG |
10.2.1 |
0.935 |
0.965 |
0.974 |
11.7|11.7|1 |
0.702 |
0.842 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
2 |
12 |
no |
yes:out |
PF06848 |
Q8TLE9 |
533-714 |
nD2 |
531-715 |
185 |
e5ntuA1 |
5NTU |
10.2.1 |
0.948 |
0.964 |
0.967 |
10.7|10.9|1 |
0.536 |
0.799 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
1 |
11 |
no |
yes:out |
PF06848 |
A0A660HS81 |
6-184 |
nD1 |
6-188 |
183 |
e5ntuA1 |
5NTU |
10.2.1 |
0.94 |
0.963 |
0.952 |
8.0|10.7|1 |
0.527 |
0.79 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
1 |
11 |
no |
no |
PF06869 |
E3M8N9 |
122-376 |
nD1 |
86-330,353-385 |
278 |
e6rm3SO01 |
6RM3 |
2484.1.1 |
0.919 |
0.0 |
0.0 |
2.7|10.7|1 |
0.818 |
1.418 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
8 |
7 |
no |
no |
PF06873 |
Q22ZG0 |
1-465 |
nD1 |
361-370,393-424 |
42 |
e1gpsA1 |
1GPS |
387.1.5 |
0.866 |
0.0 |
0.0 |
2.0|2.0|1 |
0.479 |
0.955 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
Scorpion toxin-like |
2 |
1 |
yes:out |
yes:out |
PF06891 |
A0A370T1V1 |
1-130 |
nD1 |
1-130 |
130 |
e2rjzA1 |
2RJZ |
310.3.1 |
0.894 |
0.0 |
0.0 |
7.2|7.3|0 |
0.843 |
1.354 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
General secretion pathway protein M (EpsM) periplasmic domain-related |
General secretion pathway protein M (EpsM) periplasmic domain-related |
3 |
5 |
no |
no |
PF06891 |
A0A632VUN8 |
1-130 |
nD1 |
1-130 |
130 |
e2rjzA1 |
2RJZ |
310.3.1 |
0.882 |
0.0 |
0.0 |
7.0|7.3|0 |
0.843 |
1.354 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
General secretion pathway protein M (EpsM) periplasmic domain-related |
General secretion pathway protein M (EpsM) periplasmic domain-related |
3 |
5 |
no |
no |
PF06898 |
R6I0K6 |
8-384 |
nD3 |
186-250 |
65 |
e4tkoB2 |
4TKO |
325.1.7 |
0.871 |
0.909 |
0.948 |
3.2|3.3|0 |
0.648 |
0.812 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Single hybrid motif |
0 |
4 |
no |
yes:out |
PF06898 |
R6I0K6 |
8-384 |
nD5 |
251-260,331-385 |
65 |
e3uebE1 |
3UEB |
878.1.1 |
0.94 |
0.338 |
0.441 |
5.3|5.3|1 |
0.623 |
0.674 |
pymol |
more |
good_domain |
a+b two layers |
Hypothetical protein MTH677 |
Hypothetical protein MTH677 |
Hypothetical protein MTH677 |
1 |
3 |
no |
yes:out |
PF06898 |
R5XPL9 |
8-386 |
nD3 |
181-250 |
70 |
e4tkoB2 |
4TKO |
325.1.7 |
0.898 |
0.917 |
0.951 |
2.9|3.1|0 |
0.634 |
0.875 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Single hybrid motif |
0 |
4 |
no |
yes:out |
PF06898 |
R5XPL9 |
8-386 |
nD5 |
251-265,331-385 |
70 |
e3uebE1 |
3UEB |
878.1.1 |
0.927 |
0.397 |
0.526 |
4.2|4.2|1 |
0.628 |
0.725 |
pymol |
more |
good_domain |
a+b two layers |
Hypothetical protein MTH677 |
Hypothetical protein MTH677 |
Hypothetical protein MTH677 |
1 |
3 |
no |
yes:out |
PF06898 |
Q0AWN4 |
9-394 |
nD3 |
186-225,247-265,341-400 |
119 |
e4tkoB2 |
4TKO |
325.1.7 |
0.887 |
0.917 |
0.949 |
3.1|3.3|0 |
0.622 |
1.488 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Single hybrid motif |
1 |
6 |
no |
yes:out |
PF06899 |
Q8ZAF1 |
1-443 |
nD1 |
1-430 |
430 |
e6pl5A1 |
6PL5 |
7011.1.1 |
0.917 |
0.141 |
0.0 |
9.0|9.0|1 |
0.664 |
1.222 |
pymol |
more |
good_domain |
alpha bundles |
RodA transmembrane domain |
RodA transmembrane domain |
RodA transmembrane domain |
18 |
0 |
no |
yes:11 |
PF06904 |
Q89RZ2 |
115-291 |
nD1 |
127-290 |
164 |
e1lbuA2 |
1LBU |
307.1.1 |
0.949 |
0.907 |
0.964 |
6.1|6.1|1 |
0.884 |
0.882 |
pymol |
more |
good_domain |
a+b two layers |
Hedgehog/DD-peptidase |
Hedgehog/DD-peptidase |
Hedgehog/DD-peptidase |
3 |
8 |
yes:out |
no |
PF06906 |
I4B1N5 |
1-57 |
nD1 |
1-95 |
95 |
e2wjyA5 |
2WJY |
376.1.1 |
0.935 |
0.0 |
0.424 |
2.1|2.9|1 |
0.826 |
1.218 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
2 |
2 |
no |
no |
PF06906 |
A0A849TBG4 |
1-57 |
nD1 |
1-70 |
70 |
e7o4j63 |
7O4J |
376.1.2 |
0.919 |
0.564 |
0.261 |
2.2|2.7|0 |
0.795 |
1.129 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
Cysteine-rich domain |
1 |
2 |
no |
no |
PF06918 |
E3NN77 |
122-335 |
nD2 |
101-160 |
60 |
e5ze0C1 |
5ZE0 |
101.1.11 |
0.949 |
1.0 |
0.0 |
4.1|4.4|0 |
0.768 |
0.976 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
no |
PF06918 |
G0P3U4 |
121-332 |
nD3 |
161-435,756-770 |
290 |
e6vzzA2 |
6VZZ |
2484.1.1 |
0.891 |
0.0 |
0.993 |
4.4|12.2|1 |
0.766 |
1.48 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
7 |
7 |
no |
no |
PF06919 |
A0A5T2J187 |
4-125 |
nD1 |
6-125 |
120 |
e2n19A1 |
2N19 |
292.2.1 |
0.862 |
0.0 |
0.0 |
4.2|4.2|1 |
0.816 |
1.086 |
pymol |
more |
good_domain |
a+b two layers |
RIP/Polo-box domain |
Polo-box domain |
Polo-box domain |
4 |
7 |
no |
no |
PF06923 |
R6QDD8 |
7-113 |
nD1 |
6-130 |
125 |
e1rm6E1 |
1RM6 |
244.3.1 |
0.855 |
0.0 |
0.608 |
7.3|8.1|1 |
0.796 |
1.087 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
4 |
yes:in |
no |
PF06923 |
A0A7Y0N6C3 |
3-105 |
nD1 |
6-115 |
110 |
e5t0vf1 |
5T0V |
244.3.1 |
0.891 |
0.0 |
0.461 |
6.8|7.1|1 |
0.776 |
0.957 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
5 |
yes:in |
no |
PF06923 |
A0A0N1HQC4 |
3-105 |
nD1 |
6-115 |
110 |
e5t0vf1 |
5T0V |
244.3.1 |
0.891 |
0.0 |
0.561 |
6.9|7.2|1 |
0.776 |
0.957 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
5 |
yes:in |
no |
PF06932 |
Q7N4T5 |
37-120 |
nD1 |
66-115 |
50 |
e4dt0A2 |
4DT0 |
3464.1.1 |
0.877 |
0.0 |
0.0 |
3.8|3.8|0 |
0.588 |
0.758 |
pymol |
more |
good_domain |
extended segments |
Helical region in V-type proton ATPase subunit E |
Helical region in V-type proton ATPase subunit E |
Helical region in V-type proton ATPase subunit E |
1 |
2 |
yes:out |
no |
PF06933 |
Q23766 |
1-742 |
nD7 |
446-580 |
135 |
e5k7vC2 |
5K7V |
601.1.1 |
0.895 |
0.0 |
0.0 |
11.2|11.2|1 |
0.868 |
1.031 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
0 |
yes:out |
yes:out |
PF06933 |
O44418 |
1-756 |
nD3 |
446-595,601-670 |
220 |
e7rdrC2 |
7RDR |
109.3.1 |
0.914 |
0.0 |
0.0 |
12.3|12.3|1 |
0.809 |
1.106 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
0 |
yes:out |
yes:1 |
PF06933 |
O44416 |
1-748 |
nD6 |
476-530,631-660 |
85 |
e4uy3A1 |
4UY3 |
632.22.1 |
0.922 |
0.0 |
0.0 |
8.8|8.8|1 |
0.775 |
0.817 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
yes:out |
yes:out |
PF06934 |
D5V6Y9 |
88-766 |
nD2 |
201-248,273-305,332-550,576-590,611-664,686-770 |
454 |
e3cnuA1 |
3CNU |
268.1.1 |
0.945 |
0.0 |
0.0 |
4.7|6.1|1 |
0.833 |
3.982 |
pymol |
more |
good_domain |
a+b two layers |
Sterol carrier protein-like |
Sterol carrier protein, SCP-related |
Sterol carrier protein, SCP-related |
16 |
12 |
yes:out |
no |
PF06934 |
Q0VNV0 |
95-786 |
nD2 |
211-269,296-785 |
549 |
e3ssoB1 |
3SSO |
268.1.1 |
0.932 |
0.0 |
0.0 |
5.0|6.2|1 |
0.554 |
4.816 |
pymol |
more |
good_domain |
a+b two layers |
Sterol carrier protein-like |
Sterol carrier protein, SCP-related |
Sterol carrier protein, SCP-related |
18 |
13 |
yes:out |
no |
PF06942 |
A0A7U6RDS2 |
5-111 |
nD1 |
6-110 |
105 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.926 |
0.0 |
0.0 |
6.5|6.5|1 |
0.763 |
1.193 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
5 |
0 |
yes:in |
yes:3 |
PF06942 |
A0A0Q0XY12 |
5-111 |
nD1 |
6-110 |
105 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.851 |
0.0 |
0.0 |
6.6|6.8|0 |
0.763 |
1.193 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
5 |
0 |
no |
yes:4 |
PF06943 |
Q57UP9 |
9-33 |
nD1 |
6-35 |
30 |
e7oqyY2 |
7OQY |
375.1.1 |
0.942 |
0.971 |
0.956 |
0.0|0.0|1 |
0.679 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF06945 |
A0A3A2I4E8 |
3-44 |
nD1 |
17-55 |
39 |
e4iloB6 |
4ILO |
375.1.1 |
0.935 |
0.663 |
0.938 |
0.0|0.0|0 |
0.628 |
0.696 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
1 |
no |
no |
PF06946 |
A0A4R6TZ49 |
3-87 |
nD1 |
1-75 |
75 |
e4v8mAL1 |
4V8M |
101.1.17 |
0.882 |
0.0 |
0.0 |
4.0|4.9|0 |
0.754 |
1.042 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
FF domain |
3 |
0 |
yes:in |
yes:1 |
PF06947 |
A0A535K903 |
23-107 |
nD1 |
1-105 |
105 |
e4d7xA1 |
4D7X |
103.4.1 |
0.94 |
0.0 |
0.0 |
8.2|8.2|1 |
0.95 |
1.082 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
yes:in |
yes:3 |
PF06947 |
A0A536QQX2 |
23-107 |
nD1 |
1-105 |
105 |
e4d7xA1 |
4D7X |
103.4.1 |
0.934 |
0.0 |
0.0 |
8.1|8.1|0 |
0.95 |
1.082 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
yes:in |
yes:3 |
PF06972 |
U5D0R9 |
13-72 |
nD1 |
16-55 |
40 |
e1otrA1 |
1OTR |
103.1.1 |
0.939 |
0.954 |
0.987 |
0.0|0.0|1 |
0.83 |
0.702 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
3 |
0 |
no |
no |
PF06980 |
A0A369WRF0 |
14-557 |
nD1 |
31-555 |
525 |
e6eusB1 |
6EUS |
5084.5.1 |
0.893 |
0.874 |
0.91 |
15.5|20.2|1 |
0.88 |
1.427 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
20 |
yes:out |
no |
PF06980 |
A0A480AJ53 |
17-563 |
nD1 |
36-95,101-425,466-563 |
483 |
e6zhpB1 |
6ZHP |
5084.5.1 |
0.889 |
0.975 |
0.93 |
14.7|17.7|1 |
0.688 |
1.312 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
20 |
yes:out |
no |
PF06980 |
A0A2G1ULN6 |
31-652 |
nD1 |
56-80,96-290,311-355,381-425,461-515,556-650 |
460 |
e4afkA1 |
4AFK |
5084.5.2 |
0.935 |
0.886 |
0.945 |
20.7|23.3|0 |
0.894 |
1.077 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Maltoporin-like |
3 |
21 |
yes:out |
no |
PF06985 |
Q0U0I6 |
173-322 |
nD2 |
121-260,311-350 |
180 |
e6nqcA1 |
6NQC |
2007.1.1 |
0.9 |
0.0 |
0.0 |
3.7|3.8|0 |
0.697 |
0.849 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Class I glutamine amidotransferase-like |
7 |
9 |
no |
no |
PF06985 |
Q0CVW4 |
79-238 |
nD2 |
21-175,226-270,301-430 |
330 |
e5foeB1 |
5FOE |
7512.1.1 |
0.892 |
0.0 |
0.0 |
5.7|5.7|1 |
0.634 |
1.65 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
12 |
11 |
no |
no |
PF07006 |
E6K0A3 |
25-147 |
nD2 |
46-175 |
130 |
e2k3dA1 |
2K3D |
243.10.1 |
0.942 |
0.996 |
0.995 |
6.1|6.1|1 |
0.862 |
1.494 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Lin0334 protein |
Lin0334 protein |
4 |
4 |
no |
yes:out |
PF07016 |
A7S4G3 |
22-43 |
nD1 |
1-88 |
88 |
e3eh0C1 |
3EH0 |
208.1.1 |
0.928 |
0.0 |
0.402 |
9.7|11.7|1 |
0.997 |
0.494 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded left-handed beta-helix |
Trimeric LpxA-like enzymes |
Trimeric LpxA-like enzymes |
0 |
8 |
no |
no |
PF07041 |
A0A0H3JD17 |
1-112 |
nD1 |
6-70 |
65 |
e2fggA1 |
2FGG |
330.8.1 |
0.855 |
0.0 |
0.0 |
4.4|4.4|1 |
0.712 |
0.756 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Rv2632c-like |
Rv2632c-like |
1 |
3 |
no |
no |
PF07041 |
Q8X4T0 |
1-112 |
nD1 |
1-70 |
70 |
e2fggA1 |
2FGG |
330.8.1 |
0.854 |
0.0 |
0.0 |
4.3|4.4|1 |
0.748 |
0.814 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Rv2632c-like |
Rv2632c-like |
1 |
3 |
no |
no |
PF07051 |
A0A6J1MX86 |
35-122 |
nD1 |
41-135 |
95 |
e6za931 |
6ZA9 |
5041.1.1 |
0.893 |
0.0 |
0.0 |
6.0|6.6|0 |
0.956 |
1.218 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
3 |
1 |
no |
no |
PF07064 |
A0A095C961 |
699-956 |
nD3 |
681-885 |
205 |
e4l1nA1 |
4L1N |
5.1.8 |
0.916 |
0.0 |
0.0 |
6.3|6.3|1 |
0.447 |
1.273 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
putative conserved lipoprotein NT01CX_1156 |
6 |
8 |
no |
no |
PF07064 |
A0A3M7DP89 |
498-745 |
nD3 |
451-660 |
210 |
e1x5bA1 |
1X5B |
109.4.1 |
0.901 |
0.0 |
0.435 |
5.3|6.5|1 |
0.487 |
0.734 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
7 |
no |
no |
PF07064 |
A0A0D0V516 |
699-956 |
nD3 |
681-915 |
235 |
e6e9vB1 |
6E9V |
109.3.1 |
0.868 |
0.0 |
0.0 |
8.0|8.0|1 |
0.412 |
1.181 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
8 |
no |
no |
PF07067 |
A0A0E2Q3V3 |
2-235 |
nD1 |
6-105 |
100 |
e7bqnA1 |
7BQN |
3455.1.1 |
0.895 |
0.0 |
0.0 |
4.1|4.1|1 |
0.628 |
1.163 |
pymol |
more |
good_domain |
alpha arrays |
WY-domain in RXLR effectors |
WY-domain in RXLR effectors |
WY-domain in RXLR effectors |
5 |
0 |
no |
no |
PF07067 |
A0A0E2Q3V3 |
2-235 |
nD2 |
106-210 |
105 |
e3eusA1 |
3EUS |
101.1.4 |
0.866 |
0.0 |
0.0 |
3.5|4.2|0 |
0.846 |
1.346 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
6 |
0 |
no |
no |
PF07067 |
A0A3S4LRW7 |
3-234 |
nD1 |
6-90 |
85 |
e2wusR1 |
2WUS |
101.1.4 |
0.856 |
0.0 |
0.0 |
3.7|4.2|0 |
0.779 |
1.09 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
5 |
0 |
no |
no |
PF07083 |
Q9A028 |
3-219 |
nD2 |
171-220 |
50 |
e2mh8A1 |
2MH8 |
632.2.1 |
0.906 |
0.0 |
0.0 |
4.9|4.9|1 |
0.887 |
0.826 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
3 |
1 |
no |
no |
PF07093 |
B3M6N2 |
18-636 |
nD1 |
16-220 |
205 |
e3cw2C5 |
3CW2 |
304.19.1 |
0.9 |
0.0 |
0.0 |
7.6|7.6|1 |
0.894 |
2.204 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
eIF-2-alpha, C-terminal domain |
eIF-2-alpha, C-terminal domain |
7 |
6 |
no |
no |
PF07093 |
I3IWE7 |
14-628 |
nD1 |
11-200 |
190 |
e7n7sB3 |
7N7S |
304.31.1 |
0.929 |
0.0 |
0.0 |
6.5|6.5|1 |
0.865 |
1.624 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
HMG-CoA reductase |
NAD-binding domain of HMG-CoA reductase |
5 |
8 |
no |
no |
PF07093 |
F6XT15 |
81-667 |
nD1 |
76-265 |
190 |
e7n7sB3 |
7N7S |
304.31.1 |
0.94 |
0.0 |
0.0 |
7.0|7.0|1 |
0.865 |
1.624 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
HMG-CoA reductase |
NAD-binding domain of HMG-CoA reductase |
4 |
6 |
no |
no |
PF07094 |
Q9S0D5 |
1-223 |
nD1 |
71-165 |
95 |
e2ypbB1 |
2YPB |
105.1.1 |
0.927 |
0.0 |
0.0 |
4.2|4.3|0 |
0.645 |
1.418 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
5 |
0 |
no |
no |
PF07094 |
Q9S056 |
1-223 |
nD1 |
71-165 |
95 |
e2ypbB1 |
2YPB |
105.1.1 |
0.927 |
0.0 |
0.0 |
4.3|4.4|0 |
0.645 |
1.418 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
5 |
0 |
no |
no |
PF07103 |
A0A1P8FQ58 |
6-246 |
nD1 |
1-235 |
235 |
e3emmA1 |
3EMM |
9.1.1 |
0.881 |
0.0 |
0.0 |
6.9|6.9|1 |
0.881 |
1.536 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
5 |
12 |
no |
no |
PF07104 |
J7MA90 |
2-111 |
nD1 |
1-65 |
65 |
e1vjlA1 |
1VJL |
802.1.1 |
0.882 |
0.0 |
0.0 |
4.2|4.2|1 |
0.923 |
0.867 |
pymol |
more |
good_domain |
a+b two layers |
Hypothetical protein TM0160 |
Hypothetical protein TM0160 |
Hypothetical protein TM0160 |
3 |
3 |
no |
no |
PF07107 |
P20144 |
1-105 |
nD1 |
16-105 |
90 |
e4lmiB1 |
4LMI |
243.1.1 |
0.87 |
0.976 |
0.984 |
3.4|5.4|0 |
0.43 |
0.677 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
NTF2-like |
NTF2-like |
1 |
7 |
no |
no |
PF07112 |
O49038 |
9-402 |
nD1 |
6-110 |
105 |
e3h20A2 |
3H20 |
6035.1.1 |
0.93 |
0.241 |
0.512 |
5.8|6.7|1 |
0.908 |
1.019 |
pymol |
more |
good_domain |
alpha bundles |
Primase helical domain |
Primase helical domain |
Primase helical domain |
5 |
0 |
no |
yes:out |
PF07114 |
W5P4W9 |
51-229 |
nD1 |
46-230 |
185 |
e1r0dI1 |
1R0D |
601.1.2 |
0.917 |
0.0 |
0.0 |
7.0|7.0|1 |
0.763 |
1.121 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
no |
PF07114 |
R0LJC4 |
23-200 |
nD1 |
21-195 |
175 |
e1r0dI1 |
1R0D |
601.1.2 |
0.859 |
0.0 |
0.0 |
6.4|6.4|1 |
0.781 |
1.061 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
yes:3 |
PF07116 |
A0A123UMP8 |
2-98 |
nD2 |
36-100 |
65 |
e6swdE3 |
6SWD |
2.1.1 |
0.912 |
0.0 |
0.781 |
4.7|4.7|1 |
0.832 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
3 |
no |
yes:out |
PF07116 |
A0A3L9DT60 |
1-97 |
nD1 |
51-95 |
45 |
e3d31B3 |
3D31 |
2.4.1 |
0.863 |
0.498 |
0.515 |
4.7|5.2|1 |
0.679 |
0.672 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
MOP-like |
MOP-like |
1 |
3 |
yes:out |
no |
PF07149 |
E3MHN5 |
1-375 |
nD2 |
76-165,201-285 |
175 |
e4n2qA1 |
4N2Q |
109.4.1 |
0.852 |
0.0 |
0.368 |
5.9|7.4|1 |
0.712 |
0.612 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
0 |
no |
no |
PF07149 |
Q9XWH5 |
1-368 |
nD2 |
71-175 |
105 |
e2xplA1 |
2XPL |
611.3.1 |
0.885 |
0.215 |
0.0 |
6.6|8.6|0 |
0.767 |
1.019 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
5 |
0 |
no |
no |
PF07149 |
Q9XWH5 |
1-368 |
nD4 |
271-370 |
100 |
e2xplA1 |
2XPL |
611.3.1 |
0.949 |
0.363 |
0.464 |
6.6|7.4|1 |
0.789 |
0.971 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
6 |
1 |
no |
no |
PF07151 |
A0A1V4T099 |
2-49 |
nD1 |
11-50 |
40 |
e3ax1A2 |
3AX1 |
386.1.1 |
0.9 |
0.0 |
0.0 |
3.9|3.9|1 |
0.937 |
1.212 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
1 |
3 |
no |
no |
PF07151 |
P0ACW0 |
2-49 |
nD1 |
11-50 |
40 |
e3ax1A2 |
3AX1 |
386.1.1 |
0.9 |
0.0 |
0.0 |
3.9|3.9|1 |
0.937 |
1.212 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
1 |
3 |
no |
no |
PF07156 |
H9GD80 |
30-394 |
nD1 |
1-405 |
405 |
e4dgkA1 |
4DGK |
2003.1.2 |
0.944 |
0.963 |
0.99 |
4.4|17.4|1 |
0.714 |
1.723 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
FAD/NAD(P)-binding domain |
12 |
16 |
no |
no |
PF07162 |
F7BHN1 |
11-174 |
nD1 |
6-125,161-185 |
145 |
e5iz5A2 |
5IZ5 |
11.2.1 |
0.938 |
0.0 |
0.276 |
10.2|11.8|1 |
0.944 |
1.028 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
1 |
9 |
yes:in |
no |
PF07165 |
A0A182K5Y7 |
3-197 |
nD1 |
6-135,156-195 |
170 |
e6egcA1 |
6EGC |
192.29.1 |
0.903 |
0.0 |
0.0 |
6.3|6.3|1 |
0.7 |
2.237 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
9 |
0 |
no |
no |
PF07165 |
A0A182YFN2 |
28-224 |
nD1 |
21-225 |
205 |
e6egcA1 |
6EGC |
192.29.1 |
0.925 |
0.0 |
0.0 |
4.4|4.4|1 |
0.694 |
2.697 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
11 |
1 |
yes:out |
no |
PF07179 |
R7AFA1 |
78-201 |
nD1 |
76-210 |
135 |
e4ev1A2 |
4EV1 |
3397.1.1 |
0.852 |
0.583 |
0.711 |
4.9|6.3|0 |
0.735 |
1.268 |
pymol |
more |
good_domain |
a+b complex topology |
Tic22 |
Tic22 |
Tic22 |
6 |
6 |
no |
no |
PF07187 |
A0A1G7ZG42 |
24-183 |
nD1 |
6-198 |
193 |
e6wvhB2 |
6WVH |
633.22.1 |
0.862 |
0.141 |
0.157 |
5.4|6.5|0 |
0.739 |
1.214 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Vitamin K epoxide reductase (VKOR) |
Vitamin K epoxide reductase (VKOR) |
6 |
0 |
no |
yes:6 |
PF07193 |
D2BK85 |
1-73 |
nD1 |
1-55 |
55 |
e1ybyA3 |
1YBY |
4.1.1 |
0.869 |
0.0 |
0.372 |
3.2|3.3|1 |
0.817 |
0.688 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
0 |
5 |
no |
no |
PF07217 |
Q0U1X6 |
11-565 |
nD2 |
96-120,291-430 |
165 |
e3edvB3 |
3EDV |
604.1.1 |
0.948 |
0.0 |
0.0 |
6.8|7.3|0 |
0.952 |
1.5 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
6 |
0 |
yes:out |
no |
PF07217 |
Q2UDC3 |
12-601 |
nD2 |
91-120,291-350,401-470 |
160 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.924 |
0.0 |
0.0 |
6.4|6.4|1 |
0.581 |
0.988 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
6 |
0 |
yes:out |
no |
PF07218 |
A0A1A8WZ07 |
1-761 |
nD1 |
181-240,311-375,551-620,751-760 |
205 |
e1ldkA1 |
1LDK |
109.4.1 |
0.891 |
0.0 |
0.145 |
4.0|4.7|1 |
0.401 |
0.717 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
2 |
yes:out |
no |
PF07218 |
A5K1C5 |
1-740 |
nD1 |
288-370,416-605 |
273 |
e5jsbB1 |
5JSB |
310.2.1 |
0.874 |
0.0 |
0.0 |
5.5|5.5|1 |
0.67 |
1.484 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
13 |
4 |
yes:out |
no |
PF07222 |
Q3V140 |
1-237 |
nD1 |
31-124 |
94 |
e6maaA1 |
6MAA |
379.1.1 |
0.946 |
0.0 |
0.0 |
2.9|2.9|1 |
0.953 |
1.774 |
pymol |
more |
good_domain |
few secondary structure elements |
Kazal-type serine protease inhibitors-like |
Kazal-type serine protease inhibitors |
Kazal-type serine protease inhibitors |
4 |
1 |
yes:out |
no |
PF07222 |
A0A671DWP5 |
45-280 |
nD1 |
76-169 |
94 |
e6maaA1 |
6MAA |
379.1.1 |
0.937 |
0.0 |
0.0 |
2.3|3.5|1 |
0.953 |
1.774 |
pymol |
more |
good_domain |
few secondary structure elements |
Kazal-type serine protease inhibitors-like |
Kazal-type serine protease inhibitors |
Kazal-type serine protease inhibitors |
3 |
1 |
no |
no |
PF07226 |
A0A1J5MQA6 |
5-115 |
nD1 |
6-110 |
105 |
e6wk9B1 |
6WK9 |
5059.1.1 |
0.941 |
0.0 |
0.0 |
7.1|7.1|1 |
0.843 |
0.7 |
pymol |
more |
good_domain |
alpha bundles |
Drug/Metabolite transporter |
Drug/Metabolite transporter |
Drug/Metabolite transporter |
4 |
0 |
no |
yes:4 |
PF07232 |
P14321 |
1-328 |
nD3 |
71-280 |
210 |
e4pp4A1 |
4PP4 |
304.55.1 |
0.935 |
0.381 |
0.667 |
6.5|6.5|1 |
0.775 |
1.317 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Origin of replication-binding domains |
6 |
5 |
no |
no |
PF07253 |
P10403 |
41-509 |
nD1 |
46-115,161-400,426-450 |
335 |
e5ejbD1 |
5EJB |
5093.1.1 |
0.919 |
0.97 |
0.967 |
5.6|9.4|1 |
0.37 |
0.892 |
pymol |
more |
good_domain |
a+b complex topology |
Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein |
Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein |
Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein |
8 |
13 |
no |
yes:out |
PF07254 |
A0A097QZ25 |
3-133 |
nD1 |
66-135 |
70 |
e7nkyO3 |
7NKY |
220.1.1 |
0.89 |
0.0 |
0.0 |
5.5|5.5|1 |
0.711 |
0.574 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
yes:out |
PF07278 |
W8KYD6 |
9-149 |
nD2 |
61-160 |
100 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.947 |
0.0 |
0.0 |
7.3|7.3|1 |
0.72 |
1.136 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
3 |
0 |
no |
no |
PF07283 |
G4T4J0 |
31-143 |
nD1 |
21-143 |
123 |
e5ixmH1 |
5IXM |
7503.1.1 |
0.925 |
0.83 |
0.674 |
4.3|4.4|1 |
0.598 |
0.815 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
3 |
7 |
yes:out |
no |
PF07284 |
A0A165LXN9 |
4-141 |
nD1 |
6-150 |
145 |
e6y07A1 |
6Y07 |
192.29.1 |
0.921 |
0.0 |
0.0 |
12.1|12.1|1 |
0.873 |
1.908 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF07284 |
A0A101JSJ6 |
4-142 |
nD1 |
1-155 |
155 |
e7jrqA1 |
7JRQ |
3684.1.1 |
0.912 |
0.0 |
0.0 |
12.3|12.3|1 |
0.983 |
1.23 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
4 |
0 |
no |
yes:4 |
PF07284 |
A0A533TKE0 |
4-142 |
nD1 |
1-150 |
150 |
e6y07A1 |
6Y07 |
192.29.1 |
0.921 |
0.0 |
0.0 |
12.1|12.1|0 |
0.872 |
1.974 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF07285 |
B7GK74 |
4-267 |
nD2 |
86-260 |
175 |
e4v7eBY1 |
4V7E |
304.109.1 |
0.87 |
0.0 |
0.0 |
3.1|3.1|1 |
0.747 |
1.446 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ribosomal proteins S24e, L23 and L15e |
Ribosomal proteins S24e, L23 and L15e |
5 |
10 |
no |
no |
PF07295 |
V4J6A6 |
41-184 |
nD2 |
141-185 |
45 |
e2gmgA3 |
2GMG |
375.1.1 |
0.935 |
0.974 |
0.974 |
0.0|0.0|0 |
0.971 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF07296 |
Q93GN8 |
1-198 |
nD1 |
6-50,116-140 |
70 |
e5mbvA1 |
5MBV |
6027.1.1 |
0.874 |
0.0 |
0.0 |
5.0|5.0|1 |
0.704 |
0.714 |
pymol |
more |
good_domain |
alpha arrays |
Host-nuclease inhibitor protein Gam |
Host-nuclease inhibitor protein Gam |
Host-nuclease inhibitor protein Gam |
2 |
1 |
no |
yes:2 |
PF07327 |
P10776 |
1-107 |
nD1 |
31-85 |
55 |
e1wqjB1 |
1WQJ |
389.6.1 |
0.944 |
0.0 |
0.85 |
4.8|6.9|1 |
0.668 |
0.414 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
Growth factor receptor domain |
Growth factor receptor domain |
0 |
3 |
yes:out |
no |
PF07328 |
P18591 |
5-146 |
nD1 |
26-65,136-145 |
50 |
e6qeqA1 |
6QEQ |
101.1.11 |
0.888 |
0.997 |
0.984 |
0.0|8.1|0 |
0.936 |
0.813 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
no |
PF07356 |
A0A6N3GZ50 |
1-175 |
nD1 |
1-100 |
100 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.905 |
0.0 |
0.0 |
7.2|7.6|1 |
0.753 |
0.606 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
1 |
7 |
no |
no |
PF07356 |
A0A3R8ZN37 |
6-191 |
nD1 |
1-120 |
120 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.906 |
0.0 |
0.0 |
9.4|10.1|1 |
0.827 |
0.727 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
1 |
8 |
no |
no |
PF07356 |
A0A564IVP2 |
1-175 |
nD1 |
1-100 |
100 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.895 |
0.0 |
0.0 |
7.1|7.1|1 |
0.75 |
0.606 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
1 |
7 |
no |
no |
PF07357 |
A0A5C7ZJ52 |
12-263 |
nD1 |
6-69,91-265 |
239 |
e1gxyA1 |
1GXY |
237.1.1 |
0.945 |
0.899 |
0.75 |
5.1|5.2|1 |
0.697 |
1.172 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
8 |
8 |
no |
no |
PF07357 |
A0A524B492 |
12-263 |
nD1 |
6-69,92-265 |
238 |
e1gxyA1 |
1GXY |
237.1.1 |
0.946 |
0.906 |
0.751 |
5.1|5.1|1 |
0.691 |
1.167 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
8 |
8 |
no |
no |
PF07363 |
Q7NZ67 |
33-137 |
nD1 |
61-138 |
78 |
e2p01A1 |
2P01 |
632.8.1 |
0.903 |
0.0 |
0.0 |
6.3|6.3|1 |
0.632 |
0.703 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
2 |
1 |
no |
no |
PF07374 |
R4KT28 |
35-133 |
nD1 |
1-140 |
140 |
e6r2gA1 |
6R2G |
3567.1.1 |
0.879 |
0.0 |
0.0 |
9.4|9.8|0 |
0.94 |
2.373 |
pymol |
na |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
5 |
0 |
no |
no |
PF07374 |
Q1CP47 |
32-131 |
nD2 |
6-15,61-135 |
85 |
e6dxoA2 |
6DXO |
101.1.1 |
0.918 |
0.982 |
0.986 |
8.1|8.6|0 |
1.0 |
1.164 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
no |
no |
PF07383 |
Q3IC05 |
30-83 |
nD1 |
41-80 |
40 |
e2mhpA2 |
2MHP |
391.1.1 |
0.916 |
0.0 |
0.72 |
3.4|3.6|1 |
0.838 |
0.87 |
pymol |
more |
good_domain |
few secondary structure elements |
Fibronectin type I module-like |
Fibronectin type I module-like |
Fibronectin type I module |
0 |
5 |
yes:out |
no |
PF07383 |
U4KCL9 |
28-80 |
nD1 |
36-80 |
45 |
e2cg7A2 |
2CG7 |
391.1.1 |
0.917 |
0.0 |
0.696 |
3.1|3.5|1 |
0.87 |
0.978 |
pymol |
more |
good_domain |
few secondary structure elements |
Fibronectin type I module-like |
Fibronectin type I module-like |
Fibronectin type I module |
0 |
5 |
yes:out |
no |
PF07383 |
A0A3A3EIH5 |
19-71 |
nD1 |
31-70 |
40 |
e2ec3A1 |
2EC3 |
391.1.1 |
0.933 |
0.258 |
0.713 |
2.7|2.9|1 |
0.716 |
0.87 |
pymol |
more |
good_domain |
few secondary structure elements |
Fibronectin type I module-like |
Fibronectin type I module-like |
Fibronectin type I module |
0 |
5 |
yes:out |
no |
PF07406 |
B4GBR4 |
28-205 |
nD2 |
121-215 |
95 |
e1ufbA1 |
1UFB |
601.7.1 |
0.945 |
0.772 |
0.522 |
5.4|6.7|1 |
0.698 |
0.674 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
4 |
0 |
no |
yes:out |
PF07421 |
P10673 |
7-170 |
nD1 |
51-70,96-125 |
50 |
e3lraA1 |
3LRA |
614.1.1 |
0.92 |
0.0 |
0.0 |
3.7|5.2|0 |
0.792 |
0.806 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
L27 domain |
L27 domain |
L27 domain |
3 |
0 |
yes:out |
no |
PF07423 |
Q81BH2 |
142-231 |
nD1 |
141-233 |
93 |
e3wa2X2 |
3WA2 |
243.5.1 |
0.875 |
0.0 |
0.0 |
5.8|5.8|1 |
0.83 |
0.769 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Amine oxidase N-terminal region |
Amine oxidase N-terminal region |
1 |
4 |
no |
yes:out |
PF07423 |
A0A0M1NX25 |
137-229 |
nD1 |
121-235 |
115 |
e3wa2X2 |
3WA2 |
243.5.1 |
0.896 |
0.0 |
0.0 |
4.1|4.1|1 |
0.86 |
0.95 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Amine oxidase N-terminal region |
Amine oxidase N-terminal region |
1 |
5 |
no |
yes:out |
PF07433 |
A0A454CVD4 |
7-299 |
nD1 |
1-300 |
300 |
e4ci8A1 |
4CI8 |
5.1.4 |
0.902 |
0.997 |
0.999 |
23.9|27.3|1 |
0.871 |
0.836 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
24 |
no |
no |
PF07433 |
A0A090SUH1 |
1-285 |
nD1 |
1-285 |
285 |
e5h1jA1 |
5H1J |
5.1.4 |
0.917 |
0.995 |
0.998 |
18.4|25.2|1 |
0.765 |
0.794 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
22 |
no |
no |
PF07444 |
A0A6B7EV08 |
10-85 |
nD1 |
6-90 |
85 |
e6uxeB1 |
6UXE |
1128.1.1 |
0.948 |
0.0 |
0.0 |
6.9|7.0|0 |
0.964 |
0.854 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
3 |
0 |
no |
yes:3 |
PF07444 |
A0A6B7ILY0 |
10-85 |
nD1 |
6-90 |
85 |
e6uxeB1 |
6UXE |
1128.1.1 |
0.948 |
0.0 |
0.0 |
6.9|7.0|0 |
0.964 |
0.854 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
3 |
0 |
no |
yes:3 |
PF07483 |
K7WVL0 |
150-254 |
nD1 |
26-255 |
230 |
e2iwaA1 |
2IWA |
5.1.4 |
0.889 |
0.0 |
0.0 |
4.9|6.5|0 |
0.691 |
0.641 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
17 |
no |
no |
PF07507 |
Q9KVB7 |
9-306 |
nD1 |
1-285 |
285 |
e5ekeC1 |
5EKE |
7516.1.1 |
0.942 |
0.627 |
0.496 |
7.8|10.0|1 |
0.822 |
1.075 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
8 |
11 |
no |
no |
PF07507 |
A0A4Y6I8D7 |
7-311 |
nD1 |
1-320 |
320 |
e5heaB1 |
5HEA |
7516.1.1 |
0.935 |
0.768 |
0.739 |
8.9|9.7|1 |
0.811 |
1.208 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
9 |
11 |
no |
no |
PF07509 |
D5ANF4 |
4-175 |
nD1 |
1-175 |
175 |
e1bcpF1 |
1BCP |
2.2.1 |
0.941 |
0.0 |
0.0 |
8.8|9.2|1 |
0.95 |
1.795 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Bacterial enterotoxins |
Bacterial enterotoxins |
3 |
5 |
no |
yes:2 |
PF07520 |
A0A4V3BNM2 |
1-987 |
nD1 |
1-240,306-320 |
255 |
e5l5gA5 |
5L5G |
11.1.1 |
0.928 |
0.0 |
0.0 |
2.8|3.1|1 |
0.893 |
2.361 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
7 |
12 |
no |
no |
PF07532 |
Q896J5 |
336-393 |
nD3 |
331-405 |
75 |
e4mb3A7 |
4MB3 |
3414.1.1 |
0.937 |
0.0 |
0.0 |
7.2|7.2|1 |
0.881 |
0.904 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
0 |
6 |
yes:out |
no |
PF07547 |
Q93845 |
96-178 |
nD2 |
86-185 |
100 |
e7dicA2 |
7DIC |
2.1.1 |
0.939 |
0.0 |
0.0 |
3.4|3.9|1 |
0.886 |
0.962 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
5 |
no |
no |
PF07547 |
O62256 |
96-179 |
nD1 |
1-195 |
195 |
e3aqqA1 |
3AQQ |
2.1.1 |
0.869 |
0.0 |
0.0 |
6.3|8.2|1 |
0.891 |
1.875 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
12 |
no |
no |
PF07552 |
A0A0T6BQ28 |
72-127 |
nD1 |
1-125 |
125 |
e6uxeB1 |
6UXE |
1128.1.1 |
0.949 |
0.0 |
0.0 |
6.9|6.9|1 |
0.92 |
1.256 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
4 |
4 |
no |
yes:1 |
PF07552 |
A0A1C3SB82 |
7-63 |
nD1 |
6-125 |
120 |
e6uxeB1 |
6UXE |
1128.1.1 |
0.869 |
0.0 |
0.0 |
6.9|7.1|0 |
0.92 |
1.206 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
4 |
4 |
no |
yes:1 |
PF07552 |
M5P819 |
71-127 |
nD1 |
6-125 |
120 |
e6uxeB1 |
6UXE |
1128.1.1 |
0.947 |
0.0 |
0.0 |
7.0|7.0|1 |
0.92 |
1.206 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
4 |
4 |
no |
yes:1 |
PF07564 |
A0A0Z8P9V2 |
2-73 |
nD1 |
6-215 |
210 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.932 |
0.0 |
0.0 |
8.4|8.4|1 |
0.613 |
3.559 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
7 |
0 |
no |
no |
PF07578 |
A9CI58 |
15-85 |
nD1 |
1-95 |
95 |
e5fvkA1 |
5FVK |
604.12.1 |
0.903 |
0.0 |
0.0 |
8.6|9.8|0 |
0.954 |
1.098 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF07583 |
A0A432MBS1 |
4-210 |
nD3 |
1-225,516-700,721-760,766-875 |
560 |
e7ext132 |
7EXT |
3144.1.1 |
0.908 |
0.69 |
0.908 |
3.6|4.5|1 |
0.587 |
2.403 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
22 |
4 |
no |
no |
PF07583 |
A0A0M3C555 |
5-211 |
nD1 |
6-15,76-204,231-255,301-405 |
269 |
e5y6pew1 |
5Y6P |
3144.1.1 |
0.94 |
0.724 |
0.752 |
2.5|3.4|1 |
0.503 |
1.155 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
13 |
3 |
no |
no |
PF07585 |
A0A225E9H4 |
1-342 |
nD2 |
1-10,41-75,121-160,186-225,256-295,326-340 |
180 |
e2vdfA1 |
2VDF |
5084.2.1 |
0.868 |
0.882 |
0.983 |
18.9|18.9|1 |
0.789 |
0.619 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPT-like |
OMPT-like |
1 |
11 |
no |
no |
PF07585 |
A0A225D7P6 |
12-357 |
nD2 |
11-30,61-95,136-175,211-250,281-355 |
210 |
e1i78A1 |
1I78 |
5084.2.1 |
0.853 |
0.985 |
0.986 |
19.9|20.9|1 |
0.681 |
0.722 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPT-like |
OMPT-like |
1 |
11 |
no |
no |
PF07587 |
Q7UGC0 |
419-678 |
nD5 |
526-733 |
208 |
e7eydA31 |
7EYD |
3144.1.1 |
0.947 |
0.921 |
0.862 |
5.4|5.4|1 |
0.631 |
0.893 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
5 |
0 |
no |
no |
PF07587 |
A0A432MBS1 |
563-824 |
nD3 |
1-225,516-700,721-760,766-875 |
560 |
e7ext132 |
7EXT |
3144.1.1 |
0.908 |
0.69 |
0.908 |
3.6|4.5|1 |
0.587 |
2.403 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
22 |
4 |
no |
no |
PF07592 |
L0DD21 |
141-450 |
nD3 |
196-240,281-400 |
165 |
e3k9kA1 |
3K9K |
2484.1.1 |
0.885 |
0.988 |
0.985 |
4.6|4.8|0 |
0.526 |
0.842 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
3 |
5 |
yes:out |
no |
PF07595 |
L7CLY3 |
29-51 |
nD1 |
21-445 |
425 |
e7akvG1 |
7AKV |
207.2.1 |
0.906 |
0.0 |
0.982 |
31.8|31.8|1 |
0.901 |
1.118 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
40 |
no |
no |
PF07598 |
Q8F8G8 |
7-630 |
nD3 |
366-588 |
223 |
e6v9zB2 |
6V9Z |
219.1.1 |
0.923 |
0.0 |
0.358 |
4.9|8.2|1 |
0.914 |
0.996 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
5 |
yes:out |
no |
PF07598 |
A1UTZ2 |
23-642 |
nD3 |
371-600 |
230 |
e4f8812 |
4F88 |
219.1.1 |
0.947 |
0.0 |
0.308 |
4.6|9.9|1 |
0.807 |
1.027 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
6 |
yes:out |
no |
PF07598 |
A0A268TAG5 |
19-628 |
nD3 |
361-588 |
228 |
e3oqcA2 |
3OQC |
219.1.1 |
0.925 |
0.0 |
0.0 |
8.6|9.2|1 |
0.806 |
1.018 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
5 |
yes:out |
no |
PF07602 |
Q7NNK7 |
49-321 |
nD1 |
11-335 |
325 |
e1ru4A1 |
1RU4 |
207.2.1 |
0.946 |
0.994 |
0.995 |
25.9|26.2|1 |
0.857 |
0.855 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
3 |
29 |
yes:in |
no |
PF07613 |
A0A833M926 |
241-406 |
nD1 |
1-240,271-405 |
375 |
e6qd5A1 |
6QD5 |
5049.1.2 |
0.932 |
0.0 |
0.0 |
11.2|12.1|0 |
0.643 |
1.084 |
pymol |
more |
good_domain |
alpha complex topology |
Ammonium transporter-related |
Ammonium transporter-related |
Urea transporter |
14 |
1 |
no |
yes:14 |
PF07624 |
L0DMJ9 |
696-769 |
nD4 |
506-620,643-668,691-770 |
221 |
e7eydA31 |
7EYD |
3144.1.1 |
0.914 |
0.69 |
0.839 |
4.0|5.2|1 |
0.731 |
0.948 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
11 |
5 |
yes:out |
no |
PF07624 |
Q7UJH8 |
858-930 |
nD5 |
66-80,221-235,661-785,821-933 |
268 |
e5y6pa81 |
5Y6P |
3144.1.1 |
0.864 |
0.646 |
0.826 |
3.2|3.2|1 |
0.655 |
1.15 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
9 |
7 |
no |
no |
PF07627 |
F0SQW2 |
565-663 |
nD4 |
502-598,623-648,681-750 |
193 |
e5y6pew1 |
5Y6P |
3144.1.1 |
0.945 |
0.703 |
0.848 |
3.8|4.2|0 |
0.489 |
0.828 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
9 |
3 |
yes:out |
no |
PF07631 |
L0DMJ9 |
445-569 |
nD4 |
506-620,643-668,691-770 |
221 |
e7eydA31 |
7EYD |
3144.1.1 |
0.914 |
0.69 |
0.839 |
4.0|5.2|1 |
0.731 |
0.948 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
11 |
5 |
yes:out |
no |
PF07637 |
D5SN54 |
255-316 |
nD2 |
146-210,236-385 |
215 |
e6kgxdJ2 |
6KGX |
3144.1.1 |
0.939 |
0.898 |
0.943 |
3.4|4.2|0 |
0.478 |
0.923 |
pymol |
more |
good_domain |
alpha arrays |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
PBS linker domain of phycobilisome linker polypeptide |
9 |
3 |
yes:out |
no |
PF07663 |
C9ACL7 |
249-341 |
nD2 |
171-340 |
170 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.869 |
0.0 |
0.0 |
4.8|6.1|0 |
0.506 |
2.329 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
6 |
0 |
no |
yes:4 |
PF07668 |
P0DI98 |
61-372 |
nD1 |
56-125,231-270 |
110 |
e6sx1A1 |
6SX1 |
3414.1.1 |
0.9 |
0.0 |
0.0 |
3.8|3.8|1 |
0.829 |
1.325 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
3 |
5 |
yes:out |
no |
PF07668 |
P0DI98 |
61-372 |
nD2 |
131-230 |
100 |
e3rriB5 |
3RRI |
211.1.1 |
0.938 |
0.0 |
0.0 |
3.2|3.3|0 |
0.864 |
1.471 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
3 |
5 |
yes:out |
no |
PF07668 |
P0DI98 |
61-372 |
nD3 |
271-375 |
105 |
e2ia7A1 |
2IA7 |
283.2.1 |
0.909 |
0.0 |
0.0 |
4.2|4.2|1 |
0.792 |
0.946 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
gpW/gp25-like |
gpW/gp25-like |
3 |
5 |
yes:out |
no |
PF07668 |
Q8EVA2 |
55-385 |
nD1 |
56-113,236-265 |
88 |
e6sx1A1 |
6SX1 |
3414.1.1 |
0.931 |
0.0 |
0.0 |
3.2|3.2|1 |
0.701 |
1.06 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
3 |
5 |
yes:out |
no |
PF07668 |
Q8EVA2 |
55-385 |
nD3 |
266-385 |
120 |
e6s5yA2 |
6S5Y |
3414.1.1 |
0.873 |
0.0 |
0.0 |
3.3|3.3|1 |
0.763 |
1.446 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
2 |
7 |
yes:out |
no |
PF07668 |
Q8EV65 |
141-445 |
nD3 |
217-310 |
94 |
e5o60H2 |
5O60 |
523.1.1 |
0.861 |
0.0 |
0.0 |
3.7|3.7|1 |
0.698 |
0.995 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein L9 C-domain |
Ribosomal protein L9 C-domain |
Ribosomal protein L9 C-domain |
4 |
5 |
no |
no |
PF07668 |
Q8EV65 |
141-445 |
nD4 |
341-445 |
105 |
e6gj1D1 |
6GJ1 |
283.2.1 |
0.89 |
0.0 |
0.0 |
4.2|4.2|1 |
0.776 |
0.946 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
gpW/gp25-like |
gpW/gp25-like |
2 |
5 |
no |
no |
PF07692 |
Q5ENL3 |
3-383 |
nD1 |
26-100,126-350 |
300 |
e6bfiA4 |
6BFI |
601.1.2 |
0.897 |
0.0 |
0.0 |
4.4|5.0|0 |
0.878 |
1.818 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
13 |
3 |
yes:out |
no |
PF07697 |
W0IZM5 |
67-313 |
nD1 |
106-190,226-265 |
125 |
e4p9tD2 |
4P9T |
601.1.1 |
0.855 |
0.0 |
0.0 |
5.9|5.9|1 |
0.629 |
0.954 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
6 |
3 |
no |
yes:out |
PF07709 |
Q4UEW7 |
144-156 |
nD1 |
36-190 |
155 |
e1r0dI1 |
1R0D |
601.1.2 |
0.948 |
0.0 |
0.0 |
7.7|8.4|1 |
0.85 |
0.939 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
0 |
no |
no |
PF07712 |
K3YHW5 |
37-399 |
nD2 |
256-400 |
145 |
e1sdwA2 |
1SDW |
10.2.1 |
0.944 |
0.988 |
0.909 |
6.5|6.8|1 |
0.684 |
0.626 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
0 |
9 |
yes:out |
no |
PF07712 |
A0A3Q7JVY0 |
30-403 |
nD2 |
251-405 |
155 |
e4zelA1 |
4ZEL |
10.2.1 |
0.945 |
0.982 |
0.886 |
5.4|7.6|1 |
0.487 |
0.67 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
0 |
9 |
yes:out |
yes:out |
PF07727 |
A0A250X882 |
50-276 |
nD1 |
11-260 |
250 |
e6ar1A1 |
6AR1 |
304.48.1 |
0.898 |
0.0 |
0.0 |
6.1|9.6|1 |
0.569 |
1.144 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Adenylyl and guanylyl cyclase catalytic domain-like |
Adenylyl and guanylyl cyclase catalytic domain-like |
7 |
12 |
no |
no |
PF07734 |
Q9CA02 |
202-382 |
nD2 |
51-385 |
335 |
e5c2vD3 |
5C2V |
5.1.3 |
0.87 |
0.0 |
0.971 |
12.7|14.5|1 |
0.899 |
0.968 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
4 |
23 |
no |
no |
PF07734 |
O04488 |
225-377 |
nD2 |
66-375 |
310 |
e2wozA1 |
2WOZ |
5.1.3 |
0.942 |
0.972 |
0.983 |
18.2|18.2|1 |
0.901 |
0.896 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
3 |
22 |
no |
no |
PF07735 |
E3MW38 |
200-260 |
nD2 |
46-328 |
283 |
e6w66B2 |
6W66 |
207.1.1 |
0.861 |
0.0 |
0.338 |
8.3|8.3|1 |
0.822 |
0.996 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
7 |
17 |
no |
no |
PF07735 |
E3MW28 |
195-256 |
nD2 |
46-70,106-323 |
243 |
e6w66B2 |
6W66 |
207.1.1 |
0.852 |
0.0 |
0.516 |
9.1|9.1|1 |
0.842 |
0.856 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
6 |
14 |
no |
no |
PF07751 |
J9WB26 |
33-250 |
nD1 |
6-65 |
60 |
e4lgmA6 |
4LGM |
148.1.3 |
0.865 |
0.0 |
0.684 |
3.5|3.5|1 |
0.698 |
0.645 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
3 |
1 |
no |
no |
PF07753 |
Q8SV54 |
357-581 |
nD3 |
386-505,546-580 |
155 |
e1wmiC1 |
1WMI |
4312.1.1 |
0.855 |
0.0 |
0.0 |
4.4|4.4|1 |
0.791 |
1.713 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
4 |
7 |
yes:out |
no |
PF07763 |
E0VM28 |
118-352 |
nD1 |
281-415 |
135 |
e4b2qC2 |
4B2Q |
160.1.1 |
0.853 |
0.0 |
0.0 |
4.7|5.0|0 |
0.73 |
1.038 |
pymol |
more |
good_domain |
alpha superhelices |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
C-terminal domain of alpha and beta subunits of F1 ATP synthase |
3 |
0 |
no |
no |
PF07768 |
A0A0E1VIY7 |
3-115 |
nD1 |
1-95 |
95 |
e3ucsB1 |
3UCS |
101.1.9 |
0.891 |
0.0 |
0.59 |
3.5|3.7|0 |
0.689 |
1.086 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
4 |
2 |
no |
no |
PF07773 |
H9G5T7 |
82-390 |
nD1 |
111-149 |
39 |
e2qkdA1 |
2QKD |
375.1.1 |
0.886 |
0.0 |
0.0 |
2.5|2.5|1 |
0.686 |
0.696 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
yes:out |
no |
PF07775 |
Q8ZWN2 |
108-618 |
nD3 |
176-295 |
120 |
e3hyiA2 |
3HYI |
242.1.1 |
0.868 |
0.0 |
0.544 |
4.5|4.5|1 |
0.688 |
0.899 |
pymol |
more |
good_domain |
a+b two layers |
Homing endonucleases-like |
Homing endonucleases |
Homing endonucleases |
4 |
8 |
no |
no |
PF07775 |
Q8ZWN2 |
108-618 |
nD4 |
296-355,426-475 |
110 |
e2dchX4 |
2DCH |
242.1.1 |
0.866 |
0.0 |
0.0 |
4.9|4.9|1 |
0.778 |
0.824 |
pymol |
more |
good_domain |
a+b two layers |
Homing endonucleases-like |
Homing endonucleases |
Homing endonucleases |
5 |
4 |
no |
no |
PF07782 |
A0A3L8DAL2 |
49-239 |
nD2 |
96-140,176-210 |
80 |
e4jf3B1 |
4JF3 |
3782.1.1 |
0.906 |
0.0 |
0.0 |
6.8|6.8|1 |
0.779 |
0.87 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Envelope glycoprotein GP2-related |
Envelope glycoprotein GP2-related |
Envelope glycoprotein GP2-related |
3 |
2 |
no |
yes:2 |
PF07787 |
Q8F2H1 |
100-343 |
nD2 |
51-95,156-179,226-270 |
114 |
e3mxnB1 |
3MXN |
2.1.1 |
0.947 |
0.0 |
0.0 |
4.4|4.4|1 |
0.764 |
1.096 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
8 |
no |
yes:out |
PF07787 |
Q8F2H1 |
100-343 |
nD3 |
16-50,271-368 |
133 |
e4tkrB1 |
4TKR |
604.12.1 |
0.899 |
0.0 |
0.0 |
5.9|7.6|0 |
0.792 |
1.538 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:4 |
PF07787 |
A0A7C6XAN0 |
109-356 |
nD2 |
61-105,167-195,236-275 |
114 |
e7pfo25 |
7PFO |
2.1.1 |
0.913 |
0.0 |
0.0 |
4.7|4.8|1 |
0.732 |
1.096 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
11 |
no |
yes:out |
PF07787 |
A0A2D6UG71 |
108-355 |
nD1 |
56-105,166-190,236-275 |
115 |
e3kf6B1 |
3KF6 |
2.1.1 |
0.938 |
0.0 |
0.0 |
5.7|5.9|1 |
0.828 |
1.106 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
10 |
no |
yes:out |
PF07796 |
A0A1M2YKK4 |
27-184 |
nD1 |
1-190 |
190 |
e1b74A1 |
1B74 |
2007.1.5 |
0.888 |
0.0 |
0.0 |
6.9|7.2|0 |
0.872 |
1.583 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
ATC-like |
8 |
6 |
no |
no |
PF07799 |
A0A058ZN69 |
24-156 |
nD1 |
1-165 |
165 |
e1ui0A1 |
1UI0 |
7569.1.1 |
0.929 |
0.825 |
0.893 |
6.0|6.6|1 |
0.689 |
0.74 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
4 |
7 |
no |
no |
PF07799 |
A0A356V606 |
24-156 |
nD1 |
1-165 |
165 |
e1ui0A1 |
1UI0 |
7569.1.1 |
0.945 |
0.872 |
0.898 |
5.9|6.4|1 |
0.663 |
0.74 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
3 |
7 |
no |
no |
PF07799 |
A0A369ZS74 |
17-154 |
nD1 |
6-173 |
168 |
e2d3yA1 |
2D3Y |
7569.1.1 |
0.949 |
0.914 |
0.925 |
6.3|7.4|1 |
0.652 |
0.753 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
3 |
7 |
no |
no |
PF07811 |
D1ACU0 |
25-67 |
nD1 |
31-138 |
108 |
e5g24A1 |
5G24 |
274.1.1 |
0.884 |
0.854 |
0.608 |
4.2|7.1|0 |
0.672 |
0.878 |
pymol |
na |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
2 |
3 |
no |
yes:1 |
PF07811 |
Q7UXS2 |
25-66 |
nD1 |
26-154 |
129 |
e5g24A1 |
5G24 |
274.1.1 |
0.933 |
0.87 |
0.536 |
4.9|8.6|0 |
0.741 |
1.049 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
3 |
3 |
no |
yes:1 |
PF07842 |
Q9SHG6 |
420-687 |
nD3 |
601-735 |
135 |
e6au8A1 |
6AU8 |
109.4.1 |
0.866 |
0.0 |
0.0 |
5.3|8.3|1 |
0.663 |
0.472 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF07864 |
A0A2D6FDI2 |
3-75 |
nD1 |
1-75 |
75 |
e2ra8A1 |
2RA8 |
4210.1.1 |
0.853 |
0.0 |
0.0 |
7.3|7.3|1 |
0.84 |
0.636 |
pymol |
more |
good_domain |
a+b two layers |
WGR domain |
WGR domain |
WGR domain |
1 |
5 |
no |
no |
PF07865 |
A0A165PQ06 |
7-71 |
nD1 |
6-85 |
80 |
e4mlvA2 |
4MLV |
330.4.1 |
0.856 |
0.0 |
0.303 |
5.0|5.0|1 |
0.789 |
0.889 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
2 |
5 |
no |
no |
PF07865 |
A0A427GQU6 |
7-71 |
nD1 |
6-85 |
80 |
e4mlvA2 |
4MLV |
330.4.1 |
0.856 |
0.0 |
0.31 |
5.0|5.0|1 |
0.789 |
0.889 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
2 |
5 |
no |
no |
PF07902 |
Q99Z20 |
1-551 |
nD1 |
1-65,76-190,196-270 |
255 |
e3ekaA1 |
3EKA |
79.1.1 |
0.943 |
0.998 |
0.0 |
0.0|5.2|0 |
0.705 |
2.189 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Phage tail fiber protein trimerization domain |
Phage tail fiber protein trimerization domain |
Phage tail fiber protein trimerization domain |
3 |
3 |
no |
no |
PF07902 |
Q99ZZ6 |
1-564 |
nD1 |
1-65,71-200,221-290 |
265 |
e3ekaA1 |
3EKA |
79.1.1 |
0.946 |
1.0 |
0.0 |
0.0|6.0|0 |
0.787 |
2.275 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Phage tail fiber protein trimerization domain |
Phage tail fiber protein trimerization domain |
Phage tail fiber protein trimerization domain |
3 |
2 |
no |
no |
PF07916 |
A1AKK8 |
28-481 |
nD3 |
156-180,261-320 |
85 |
e2w48A2 |
2W48 |
101.1.1 |
0.892 |
0.0 |
0.0 |
3.8|3.9|0 |
0.962 |
1.164 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
yes:out |
yes:out |
PF07916 |
A1AKK8 |
28-481 |
nD4 |
26-35,106-150,346-505 |
215 |
e2d4cB1 |
2D4C |
4177.1.1 |
0.874 |
0.0 |
0.0 |
5.6|5.6|1 |
0.408 |
0.862 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
5 |
3 |
yes:out |
yes:3 |
PF07937 |
E0S8X2 |
323-486 |
nD3 |
291-499 |
209 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.856 |
0.253 |
0.0 |
5.7|6.9|0 |
0.733 |
1.237 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
6 |
0 |
no |
yes:7 |
PF07937 |
Q8STQ6 |
343-511 |
nD4 |
316-529 |
214 |
e3ay5A2 |
3AY5 |
601.1.2 |
0.914 |
0.0 |
0.0 |
7.0|7.0|1 |
0.785 |
1.297 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
0 |
no |
yes:6 |
PF07937 |
Q8SUG4 |
39-218 |
nD1 |
11-220 |
210 |
e4ysxD1 |
4YSX |
5069.1.3 |
0.863 |
0.235 |
0.534 |
5.7|7.3|0 |
0.589 |
1.628 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
6 |
1 |
no |
yes:7 |
PF07947 |
Q9KLP0 |
47-227 |
nD1 |
6-229 |
224 |
e6g7oA2 |
6G7O |
5001.1.1 |
0.936 |
0.025 |
0.0 |
9.5|9.7|1 |
0.668 |
0.785 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
8 |
0 |
no |
yes:8 |
PF07947 |
A0A6I3X061 |
29-206 |
nD1 |
1-205 |
205 |
e4jq6C2 |
4JQ6 |
5001.1.1 |
0.941 |
0.01 |
0.0 |
7.3|8.2|1 |
0.715 |
0.718 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
0 |
yes:in |
yes:6 |
PF07954 |
A0A1D8PMU4 |
30-173 |
nD1 |
26-80,101-170 |
125 |
e6tz4O1 |
6TZ4 |
3291.1.1 |
0.864 |
0.0 |
0.0 |
4.1|4.1|1 |
0.6 |
0.71 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
5 |
0 |
yes:out |
yes:1 |
PF07985 |
E4ZWP2 |
104-272 |
nD1 |
76-275 |
200 |
e6fn6A7 |
6FN6 |
2003.1.5 |
0.939 |
0.0 |
0.0 |
6.5|6.5|1 |
0.849 |
0.87 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
6 |
6 |
no |
no |
PF07985 |
D8S6P5 |
48-211 |
nD1 |
11-215 |
205 |
e6fn6A7 |
6FN6 |
2003.1.5 |
0.943 |
0.0 |
0.0 |
7.9|7.9|1 |
0.852 |
0.891 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
6 |
7 |
no |
no |
PF07999 |
Q8WPT5 |
326-635 |
nD4 |
206-220,451-545 |
110 |
e7jgsE3 |
7JGS |
148.1.3 |
0.877 |
0.898 |
0.0 |
3.8|4.7|0 |
0.676 |
1.183 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
2 |
no |
no |
PF08043 |
A0A6J0ACF7 |
376-391 |
nD4 |
336-395,426-455,486-560,581-610,646-740 |
290 |
e1ouvA1 |
1OUV |
109.4.1 |
0.947 |
0.788 |
0.986 |
0.0|2.4|0 |
0.683 |
1.014 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
5 |
no |
no |
PF08044 |
A0A7J9W5V5 |
6-57 |
nD1 |
11-55 |
45 |
e4kjmB2 |
4KJM |
632.2.1 |
0.857 |
0.0 |
0.0 |
5.6|6.3|1 |
0.749 |
0.744 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
3 |
1 |
no |
no |
PF08044 |
A0A7J9XJZ6 |
6-57 |
nD1 |
11-55 |
45 |
e4kjmB2 |
4KJM |
632.2.1 |
0.857 |
0.0 |
0.0 |
5.6|6.3|1 |
0.749 |
0.744 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
3 |
1 |
no |
no |
PF08150 |
A7SHC4 |
552-628 |
nD4 |
351-430,556-635 |
160 |
e2zkmX3 |
2ZKM |
11.2.1 |
0.943 |
0.0 |
0.0 |
8.8|11.2|1 |
0.936 |
1.135 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
3 |
7 |
no |
no |
PF08165 |
A7SHC4 |
460-525 |
nD3 |
341-350,431-555 |
135 |
e6egcA1 |
6EGC |
192.29.1 |
0.926 |
0.0 |
0.0 |
11.6|11.6|1 |
0.798 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
1 |
no |
no |
PF08165 |
A0A2G8L163 |
149-214 |
nD1 |
31-40,121-245 |
135 |
e6egcA1 |
6EGC |
192.29.1 |
0.861 |
0.244 |
0.242 |
11.6|11.7|0 |
0.805 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
1 |
no |
no |
PF08192 |
A5E0H4 |
22-836 |
nD1 |
171-215,266-325 |
105 |
e2nn4A1 |
2NN4 |
4146.1.1 |
0.888 |
0.0 |
0.0 |
5.7|5.7|1 |
0.784 |
2.1 |
pymol |
more |
good_domain |
alpha bundles |
YqgQ-like |
YqgQ-like |
YqgQ-like |
4 |
0 |
no |
no |
PF08229 |
A0A146I6S2 |
3-172 |
nD1 |
1-174 |
174 |
e6egcA1 |
6EGC |
192.29.1 |
0.931 |
0.0 |
0.0 |
12.0|12.0|1 |
0.922 |
2.289 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF08229 |
A0A0C3A3A9 |
3-180 |
nD1 |
1-175 |
175 |
e6egcA1 |
6EGC |
192.29.1 |
0.934 |
0.0 |
0.0 |
12.1|12.1|1 |
0.929 |
2.303 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF08229 |
A0A165DZ03 |
3-179 |
nD1 |
1-155 |
155 |
e6egcA1 |
6EGC |
192.29.1 |
0.931 |
0.0 |
0.0 |
11.7|11.7|1 |
0.901 |
2.039 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
yes:in |
yes:3 |
PF08268 |
Q9SXA0 |
221-341 |
nD2 |
66-385 |
320 |
e2wozA1 |
2WOZ |
5.1.3 |
0.891 |
0.963 |
0.983 |
13.4|13.4|1 |
0.863 |
0.925 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
24 |
no |
no |
PF08268 |
Q9FJJ4 |
247-372 |
nD2 |
91-415 |
325 |
e4ascA1 |
4ASC |
5.1.3 |
0.909 |
0.972 |
0.983 |
15.3|15.7|1 |
0.874 |
0.939 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
23 |
yes:out |
no |
PF08277 |
Q9XTS6 |
1-68 |
nD1 |
1-70,96-110 |
85 |
e1hkyA1 |
1HKY |
390.1.1 |
0.874 |
0.505 |
0.733 |
3.8|4.9|1 |
0.797 |
0.904 |
pymol |
more |
good_domain |
few secondary structure elements |
Hairpin loop containing domain-like |
Hairpin loop containing domain-like |
Hairpin loop containing domain-like |
1 |
7 |
no |
no |
PF08277 |
A0A2P4VPJ9 |
1-73 |
nD1 |
1-125 |
125 |
e5gyyB3 |
5GYY |
390.1.1 |
0.926 |
0.0 |
0.671 |
6.3|7.0|1 |
0.911 |
1.33 |
pymol |
more |
good_domain |
few secondary structure elements |
Hairpin loop containing domain-like |
Hairpin loop containing domain-like |
Hairpin loop containing domain-like |
2 |
9 |
no |
no |
PF08309 |
Q8TIV7 |
126-163 |
nD1 |
31-330 |
300 |
e5m2nA2 |
5M2N |
5.1.4 |
0.919 |
0.999 |
0.998 |
27.9|34.0|0 |
0.909 |
0.836 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
28 |
yes:out |
no |
PF08309 |
Q6MK51 |
491-528 |
nD2 |
361-650 |
290 |
e6nd4N1 |
6ND4 |
5.1.4 |
0.933 |
0.995 |
0.994 |
28.7|29.3|1 |
0.894 |
0.808 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
26 |
yes:out |
no |
PF08309 |
Q9X043 |
143-180 |
nD1 |
26-315 |
290 |
e6nauC1 |
6NAU |
5.1.4 |
0.946 |
0.996 |
0.998 |
32.9|33.3|1 |
0.908 |
0.808 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
27 |
yes:out |
no |
PF08317 |
A0A2T2NXG1 |
745-940 |
nD2 |
811-910 |
100 |
e6vy1g1 |
6VY1 |
192.2.1 |
0.878 |
0.813 |
0.727 |
5.7|5.7|1 |
0.566 |
0.935 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
3 |
0 |
no |
no |
PF08320 |
B6HNE3 |
302-523 |
nD2 |
61-90,171-180,286-490 |
245 |
e4acqC1 |
4ACQ |
11.1.5 |
0.944 |
0.0 |
0.0 |
6.7|7.4|1 |
0.934 |
1.591 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
4 |
15 |
no |
yes:out |
PF08320 |
A0A1Y2IPY1 |
11-206 |
nD1 |
1-180 |
180 |
e1edyA1 |
1EDY |
11.1.5 |
0.94 |
0.0 |
0.0 |
9.0|9.6|1 |
0.925 |
1.169 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
10 |
no |
yes:out |
PF08320 |
A0A1M2W339 |
11-206 |
nD1 |
1-190 |
190 |
e5fo8B4 |
5FO8 |
11.1.5 |
0.894 |
0.0 |
0.0 |
8.5|9.8|1 |
0.941 |
1.234 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
3 |
12 |
no |
yes:1 |
PF08346 |
P44193 |
22-87 |
nD1 |
6-100 |
95 |
e1sbxA1 |
1SBX |
101.1.9 |
0.924 |
0.0 |
0.0 |
4.2|4.4|1 |
0.887 |
1.086 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
4 |
4 |
no |
no |
PF08349 |
A0A2K4FAL3 |
15-122 |
nD1 |
6-120 |
115 |
e5oaoA1 |
5OAO |
108.1.1 |
0.9 |
0.849 |
0.86 |
3.1|4.5|0 |
0.854 |
1.292 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
0 |
no |
no |
PF08349 |
A0A1E5TGY7 |
15-121 |
nD1 |
6-125 |
120 |
e5oaoA1 |
5OAO |
108.1.1 |
0.881 |
0.779 |
0.804 |
3.1|4.7|0 |
0.881 |
1.348 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
0 |
no |
no |
PF08379 |
L0GVJ8 |
6-84 |
nD1 |
6-85,266-290 |
105 |
e3fcsA7 |
3FCS |
11.1.1 |
0.904 |
0.0 |
0.0 |
4.0|4.0|1 |
0.56 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
no |
no |
PF08426 |
N1PDQ4 |
4-425 |
nD2 |
131-250,406-425 |
140 |
e5cwfA1 |
5CWF |
109.3.1 |
0.868 |
0.0 |
0.0 |
6.3|6.3|1 |
0.458 |
0.704 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
0 |
yes:out |
yes:3 |
PF08427 |
A0A1S3QEK6 |
1-218 |
nD1 |
1-190 |
190 |
e5nr4A1 |
5NR4 |
109.4.1 |
0.904 |
0.0 |
0.0 |
7.4|9.4|1 |
0.65 |
0.664 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
yes:2 |
PF08434 |
G1SJX9 |
24-289 |
nD1 |
26-195,226-305 |
250 |
e6be6C1 |
6BE6 |
2498.1.1 |
0.921 |
0.0 |
0.207 |
7.9|8.0|1 |
0.829 |
0.996 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
10 |
yes:out |
yes:out |
PF08455 |
J7ISX9 |
229-611 |
nD3 |
266-290,311-370 |
85 |
e7oldLk1 |
7OLD |
896.1.1 |
0.936 |
0.0 |
0.0 |
3.9|4.0|1 |
0.713 |
1.111 |
pymol |
more |
good_domain |
a+b two layers |
SRP9/14-like |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
3 |
4 |
no |
no |
PF08455 |
J7ISX9 |
229-611 |
nD4 |
371-475 |
105 |
e2idlA1 |
2IDL |
306.8.1 |
0.877 |
0.0 |
0.0 |
5.2|5.2|1 |
0.691 |
0.972 |
pymol |
more |
good_domain |
a+b two layers |
Glucose permease domain IIB-like |
TM1457-like |
TM1457-like |
2 |
6 |
no |
no |
PF08455 |
N0AZK6 |
245-622 |
nD3 |
281-385 |
105 |
e7oldLk1 |
7OLD |
896.1.1 |
0.89 |
0.0 |
0.0 |
3.9|3.9|1 |
0.699 |
1.373 |
pymol |
more |
good_domain |
a+b two layers |
SRP9/14-like |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
4 |
5 |
no |
no |
PF08455 |
N0AZK6 |
245-622 |
nD4 |
391-580 |
190 |
e6p4fC3 |
6P4F |
3696.1.1 |
0.908 |
0.0 |
0.0 |
4.3|4.5|0 |
0.89 |
2.585 |
pymol |
more |
good_domain |
a+b two layers |
DNA helicase UvsW N-terminal a+b domain-related |
DNA helicase UvsW N-terminal a+b domain-related |
DNA helicase UvsW N-terminal a+b domain-related |
5 |
12 |
no |
no |
PF08463 |
F0JE99 |
778-929 |
nD5 |
776-855 |
80 |
e7sybA1 |
7SYB |
101.1.1 |
0.94 |
0.0 |
0.0 |
4.7|4.7|1 |
0.861 |
1.096 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
1 |
no |
no |
PF08488 |
Q9S9M2 |
174-282 |
nD1 |
57-248 |
192 |
e5jifA1 |
5JIF |
10.5.1 |
0.904 |
0.0 |
0.0 |
3.4|3.4|1 |
0.681 |
0.6 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Viral protein domain |
Viral protein domain |
2 |
12 |
yes:out |
yes:out |
PF08508 |
S7ZE76 |
63-175 |
nD1 |
41-195 |
155 |
e6wvdA2 |
6WVD |
174.1.1 |
0.921 |
0.0 |
0.0 |
9.4|9.4|1 |
0.804 |
1.062 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
1 |
no |
yes:3 |
PF08510 |
A0A1E1WXF6 |
12-125 |
nD1 |
11-90 |
80 |
e2g7oA1 |
2G7O |
4288.1.1 |
0.873 |
0.0 |
0.0 |
4.2|4.2|1 |
0.874 |
1.176 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TraM-like |
TraM-like |
TraM-like |
3 |
0 |
no |
yes:2 |
PF08510 |
A0A1E1XQI0 |
12-125 |
nD1 |
11-85 |
75 |
e2g7oA1 |
2G7O |
4288.1.1 |
0.869 |
0.0 |
0.0 |
4.0|4.0|1 |
0.844 |
1.103 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TraM-like |
TraM-like |
TraM-like |
3 |
0 |
no |
yes:2 |
PF08524 |
C4WU21 |
11-146 |
nD1 |
26-50,81-150 |
95 |
e7a5kA1 |
7A5K |
3864.1.1 |
0.949 |
0.0 |
0.0 |
3.7|3.7|1 |
0.614 |
0.805 |
pymol |
more |
good_domain |
extended segments |
Mitochondrial 54S ribosomal protein L28 |
Mitochondrial 54S ribosomal protein L28 |
Mitochondrial 54S ribosomal protein L28 |
3 |
1 |
no |
no |
PF08550 |
Q7S642 |
31-58 |
nD1 |
11-60,141-155 |
65 |
e5yjcA2 |
5YJC |
3932.1.1 |
0.911 |
0.0 |
0.0 |
4.6|4.6|1 |
0.728 |
0.734 |
pymol |
more |
good_domain |
alpha bundles |
CRISPR/Cas system-associated protein Csm6 6H domain |
CRISPR/Cas system-associated protein Csm6 6H domain |
CRISPR/Cas system-associated protein Csm6 6H domain |
3 |
0 |
no |
no |
PF08552 |
G0RAA1 |
17-187 |
nD1 |
11-115,156-235 |
185 |
e6wvgA2 |
6WVG |
174.1.1 |
0.865 |
0.0 |
0.0 |
6.9|6.9|1 |
0.903 |
1.267 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
1 |
no |
yes:4 |
PF08553 |
G3J7U0 |
525-880 |
nD3 |
476-875 |
400 |
e6h0fJ3 |
6H0F |
5.1.4 |
0.926 |
0.0 |
0.987 |
20.8|27.1|1 |
0.922 |
1.114 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
26 |
no |
no |
PF08553 |
G0WD22 |
442-794 |
nD4 |
366-385,411-785 |
395 |
e5l56A1 |
5L56 |
5.1.4 |
0.889 |
0.0 |
0.996 |
20.2|26.8|1 |
0.896 |
1.1 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
4 |
26 |
no |
no |
PF08553 |
A0A1D8PP94 |
391-741 |
nD3 |
336-740 |
405 |
e6h0fJ3 |
6H0F |
5.1.4 |
0.877 |
0.0 |
0.996 |
20.0|27.4|1 |
0.911 |
1.128 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
25 |
no |
no |
PF08588 |
R1GJ69 |
23-254 |
nD1 |
1-290 |
290 |
e3weaB1 |
3WEA |
11.1.1 |
0.896 |
0.0 |
0.096 |
5.6|5.6|1 |
0.888 |
2.685 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
8 |
13 |
no |
no |
PF08588 |
A0A507DLF7 |
7-224 |
nD1 |
6-240 |
235 |
e3weaB1 |
3WEA |
11.1.1 |
0.886 |
0.0 |
0.079 |
4.9|4.9|1 |
0.853 |
2.176 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
4 |
11 |
no |
no |
PF08592 |
A0A679K8J8 |
40-133 |
nD1 |
1-140 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.938 |
0.0 |
0.0 |
14.6|14.6|1 |
0.949 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:3 |
PF08592 |
A0A6I3KKT5 |
41-136 |
nD1 |
1-140 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.94 |
0.0 |
0.0 |
14.8|14.8|1 |
0.95 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
yes:in |
yes:3 |
PF08592 |
A0A3S0TDF3 |
40-133 |
nD1 |
1-140 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.938 |
0.0 |
0.0 |
14.5|14.5|1 |
0.949 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
yes:in |
yes:3 |
PF08600 |
Q7RZE5 |
327-430 |
nD2 |
246-265,326-364,386-440 |
114 |
e3m1dA1 |
3M1D |
381.1.1 |
0.943 |
0.677 |
0.607 |
6.4|6.4|1 |
0.879 |
1.086 |
pymol |
more |
good_domain |
few secondary structure elements |
Inhibitor of apoptosis (IAP) repeat |
Inhibitor of apoptosis (IAP) repeat |
Inhibitor of apoptosis (IAP) repeat |
4 |
3 |
no |
no |
PF08618 |
B0DRC2 |
78-526 |
nD2 |
291-400,486-535 |
160 |
e4iloB5 |
4ILO |
3755.3.1 |
0.939 |
0.0 |
0.0 |
11.1|11.1|1 |
0.434 |
0.93 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
5 |
0 |
no |
no |
PF08618 |
F4S974 |
214-608 |
nD3 |
416-525,566-625 |
170 |
e6egcA1 |
6EGC |
192.29.1 |
0.943 |
0.0 |
0.0 |
10.9|11.3|1 |
0.902 |
2.237 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF08618 |
Q6CBW9 |
131-560 |
nD2 |
346-470,516-575 |
185 |
e6y07A1 |
6Y07 |
192.29.1 |
0.946 |
0.0 |
0.0 |
11.4|11.4|1 |
0.857 |
2.434 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF08636 |
A0A166N2C8 |
263-331 |
nD2 |
261-330 |
70 |
e1lrzA1 |
1LRZ |
192.7.1 |
0.87 |
0.0 |
0.0 |
7.0|7.0|1 |
0.877 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
tRNA-binding arm |
tRNA-binding arm |
3 |
0 |
no |
yes:2 |
PF08637 |
N1PJ06 |
373-658 |
nD3 |
381-425,431-560 |
175 |
e4dxwB1 |
4DXW |
5054.1.1 |
0.858 |
0.0 |
0.0 |
6.0|6.3|1 |
0.623 |
0.768 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
6 |
0 |
no |
yes:2 |
PF08728 |
Q6FWJ3 |
108-872 |
nD2 |
6-30,81-125,141-180,206-390,676-800,816-875 |
480 |
e5mc6j1 |
5MC6 |
5.1.4 |
0.926 |
0.955 |
0.967 |
17.3|23.4|1 |
0.908 |
1.337 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
9 |
30 |
no |
yes:1 |
PF08747 |
D5SSU9 |
70-207 |
nD1 |
6-210 |
205 |
e4xgcC1 |
4XGC |
2004.1.1 |
0.943 |
0.0 |
0.0 |
8.1|8.5|1 |
0.825 |
0.919 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
7 |
5 |
no |
no |
PF08747 |
Q120Z7 |
68-190 |
nD1 |
6-193 |
188 |
e4xgcC1 |
4XGC |
2004.1.1 |
0.946 |
0.0 |
0.0 |
7.4|8.0|1 |
0.868 |
0.843 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
6 |
5 |
no |
no |
PF08748 |
A9C0F1 |
1-157 |
nD1 |
11-50,91-150 |
100 |
e3fgxB1 |
3FGX |
3547.1.1 |
0.934 |
0.68 |
0.831 |
4.2|4.2|1 |
0.688 |
0.962 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
4 |
3 |
no |
no |
PF08748 |
A0A261UKV6 |
2-103 |
nD1 |
6-100 |
95 |
e3fgxB1 |
3FGX |
3547.1.1 |
0.93 |
0.544 |
0.763 |
5.6|5.6|1 |
0.823 |
0.913 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
4 |
3 |
no |
no |
PF08795 |
A4HIA2 |
2-216 |
nD1 |
1-48,121-245,271-330 |
233 |
e6hz4N1 |
6HZ4 |
2008.1.1 |
0.85 |
0.0 |
0.0 |
5.2|5.6|0 |
0.776 |
1.142 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
8 |
9 |
no |
no |
PF08800 |
A0A1T5CZ51 |
51-160 |
nD1 |
1-160 |
160 |
e4ch7A2 |
4CH7 |
304.4.1 |
0.9 |
0.0 |
0.631 |
5.9|6.7|0 |
0.941 |
1.455 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
6 |
7 |
no |
no |
PF08809 |
A9BY39 |
16-93 |
nD1 |
23-95 |
73 |
e3he0B1 |
3HE0 |
101.1.1 |
0.894 |
0.0 |
0.0 |
3.1|4.1|0 |
0.797 |
1.0 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
2 |
no |
no |
PF08812 |
K4LUG2 |
70-275 |
nD3 |
181-290 |
110 |
e2qm1B3 |
2QM1 |
2484.1.1 |
0.87 |
0.0 |
0.225 |
4.7|5.0|1 |
0.777 |
0.561 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
4 |
5 |
yes:out |
no |
PF08821 |
A0A370B1Z3 |
3-106 |
nD1 |
1-145 |
145 |
e5ijwB1 |
5IJW |
2007.1.5 |
0.899 |
0.465 |
0.823 |
5.8|6.7|0 |
0.898 |
1.208 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
ATC-like |
7 |
4 |
no |
no |
PF08821 |
A0A1J5AKL0 |
3-106 |
nD1 |
1-145 |
145 |
e2xedA2 |
2XED |
2007.1.5 |
0.915 |
0.0 |
0.806 |
6.2|6.9|0 |
0.887 |
1.208 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
ATC-like |
9 |
4 |
no |
no |
PF08856 |
A0A009FIX4 |
2-202 |
nD1 |
1-204 |
204 |
e1e5rA1 |
1E5R |
10.12.1 |
0.915 |
0.0 |
0.1 |
6.5|7.3|1 |
0.843 |
1.159 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Double-stranded beta-helix |
Double-stranded beta-helix |
6 |
9 |
no |
no |
PF08859 |
A0A7K4DD99 |
4-111 |
nD1 |
1-120 |
120 |
e5zbyA1 |
5ZBY |
2011.2.1 |
0.93 |
0.532 |
0.481 |
7.2|8.2|0 |
0.66 |
0.504 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Phosphorylase/hydrolase-like |
Peptidyl-tRNA hydrolase-like |
Peptidyl-tRNA hydrolase-like |
5 |
4 |
no |
no |
PF08861 |
A0A2Z6T843 |
35-122 |
nD1 |
6-125 |
120 |
e3vz9B1 |
3VZ9 |
4099.1.1 |
0.933 |
0.0 |
0.0 |
5.9|8.2|0 |
0.901 |
1.165 |
pymol |
more |
good_domain |
a+b two layers |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
4 |
6 |
no |
no |
PF08867 |
A0A416DQD4 |
56-143 |
nD1 |
18-285 |
268 |
e2kxiA1 |
2KXI |
237.1.1 |
0.946 |
0.708 |
0.818 |
2.5|6.5|1 |
0.697 |
1.314 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
9 |
12 |
no |
no |
PF08878 |
C3J962 |
34-259 |
nD1 |
1-275 |
275 |
e4f0pB2 |
4F0P |
2008.1.1 |
0.935 |
0.0 |
0.0 |
5.3|5.3|1 |
0.856 |
1.348 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
8 |
7 |
no |
no |
PF08889 |
A0A3D4UTW2 |
8-214 |
nD1 |
1-219 |
219 |
e4wbdA1 |
4WBD |
2005.1.1 |
0.901 |
0.936 |
0.944 |
8.1|8.1|1 |
0.659 |
1.023 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HUP domain-like |
HUP domains |
HUP domains |
8 |
10 |
no |
no |
PF08889 |
A0A2D4ZT32 |
8-214 |
nD1 |
1-215 |
215 |
e4wbdA1 |
4WBD |
2005.1.1 |
0.903 |
0.936 |
0.944 |
8.1|8.1|1 |
0.659 |
1.005 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HUP domain-like |
HUP domains |
HUP domains |
8 |
10 |
no |
no |
PF08892 |
A0A1I3VC18 |
31-227 |
nD1 |
11-113,138-210 |
176 |
e6neqz1 |
6NEQ |
328.3.1 |
0.911 |
0.0 |
0.0 |
3.9|4.1|1 |
0.886 |
1.814 |
pymol |
more |
good_domain |
a+b two layers |
IF3-like |
Translation initiation factor IF3, C-terminal domain |
Translation initiation factor IF3, C-terminal domain |
6 |
5 |
no |
no |
PF08893 |
A0A2U8VZA9 |
2-301 |
nD1 |
1-175 |
175 |
e3b79A1 |
3B79 |
219.1.1 |
0.927 |
0.0 |
0.0 |
6.7|6.7|1 |
0.922 |
0.781 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
6 |
no |
no |
PF08893 |
A0A2U8VZA9 |
2-301 |
nD2 |
176-305 |
130 |
e1yo7B1 |
1YO7 |
605.4.1 |
0.912 |
0.0 |
0.0 |
7.5|7.5|1 |
0.987 |
1.898 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
ROP protein |
ROP protein |
5 |
0 |
no |
no |
PF08893 |
A0A0J6S8N0 |
2-303 |
nD2 |
171-309 |
139 |
e1yo7B1 |
1YO7 |
605.4.1 |
0.928 |
0.0 |
0.0 |
5.9|5.9|1 |
0.987 |
2.029 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
ROP protein |
ROP protein |
5 |
0 |
no |
no |
PF08893 |
A0A5C8PJ19 |
11-322 |
nD1 |
1-15,81-185 |
120 |
e6hqzA1 |
6HQZ |
219.1.1 |
0.907 |
0.0 |
0.0 |
5.9|6.9|1 |
0.661 |
0.536 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
6 |
no |
no |
PF08893 |
A0A5C8PJ19 |
11-322 |
nD2 |
16-80,191-325 |
200 |
e6xz3A1 |
6XZ3 |
601.1.1 |
0.931 |
0.0 |
0.0 |
6.6|7.2|1 |
0.95 |
1.527 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
8 |
0 |
no |
no |
PF08894 |
A0A0M9YH59 |
20-239 |
nD1 |
1-240 |
240 |
e5yvfA1 |
5YVF |
9.1.1 |
0.922 |
0.0 |
0.0 |
9.2|9.4|1 |
0.908 |
1.569 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
4 |
10 |
no |
no |
PF08894 |
A0A6G2ZKZ0 |
21-244 |
nD1 |
6-245 |
240 |
e5yvfA1 |
5YVF |
9.1.1 |
0.923 |
0.0 |
0.0 |
9.3|9.3|1 |
0.908 |
1.569 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
5 |
10 |
no |
no |
PF08894 |
A0A1Q5DBL7 |
21-244 |
nD1 |
6-245 |
240 |
e4tq2A1 |
4TQ2 |
9.1.1 |
0.923 |
0.0 |
0.0 |
8.7|9.4|1 |
0.915 |
1.569 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
5 |
10 |
no |
no |
PF08896 |
A0A345H539 |
9-108 |
nD1 |
1-124 |
124 |
e6x1kA1 |
6X1K |
5084.1.1 |
0.943 |
0.0 |
0.0 |
9.9|9.9|1 |
0.911 |
0.701 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
0 |
8 |
no |
no |
PF08897 |
F5XZE9 |
1-131 |
nD1 |
1-135 |
135 |
e7bqqA1 |
7BQQ |
101.1.4 |
0.854 |
0.859 |
0.871 |
2.8|2.9|0 |
0.731 |
1.731 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
7 |
0 |
no |
no |
PF08907 |
Q0K9V7 |
36-351 |
nD1 |
33-365 |
333 |
e3u4qA4 |
3U4Q |
2008.1.1 |
0.88 |
0.0 |
0.569 |
3.5|4.5|1 |
0.8 |
1.632 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
10 |
11 |
no |
no |
PF08907 |
B2JIF0 |
28-319 |
nD1 |
21-230,251-260 |
220 |
e6wxxC2 |
6WXX |
2008.1.1 |
0.938 |
0.733 |
0.82 |
6.0|6.0|1 |
0.853 |
1.078 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
6 |
no |
no |
PF08909 |
A0A0M7CZY0 |
26-155 |
nD1 |
6-75 |
70 |
e2ra9A2 |
2RA9 |
3534.1.1 |
0.882 |
0.0 |
0.0 |
3.8|3.8|1 |
0.779 |
0.903 |
pymol |
more |
good_domain |
beta barrels |
Pfam PF06938 (DUF1285) |
Pfam PF06938 (DUF1285) |
Pfam PF06938 (DUF1285) |
2 |
6 |
no |
no |
PF08909 |
A0A0M7CZY0 |
26-155 |
nD2 |
81-155 |
75 |
e2ra9A2 |
2RA9 |
3534.1.1 |
0.898 |
0.0 |
0.0 |
4.7|4.7|1 |
0.891 |
0.968 |
pymol |
more |
good_domain |
beta barrels |
Pfam PF06938 (DUF1285) |
Pfam PF06938 (DUF1285) |
Pfam PF06938 (DUF1285) |
2 |
6 |
no |
no |
PF09132 |
A8BZ19 |
63-92 |
nD1 |
1-120 |
120 |
e7mn5B3 |
7MN5 |
389.6.1 |
0.881 |
0.977 |
0.897 |
0.0|3.1|1 |
0.348 |
0.902 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
Growth factor receptor domain |
Growth factor receptor domain |
1 |
6 |
no |
yes:out |
PF09323 |
Q836B6 |
2-121 |
nD1 |
1-55,91-105 |
70 |
e2mmuA1 |
2MMU |
3928.1.1 |
0.906 |
0.602 |
0.0 |
5.3|6.4|0 |
0.98 |
1.061 |
pymol |
more |
good_domain |
alpha bundles |
Cell division protein CrgA |
Cell division protein CrgA |
Cell division protein CrgA |
2 |
1 |
no |
yes:3 |
PF09323 |
G2TP40 |
2-116 |
nD1 |
1-55,86-100 |
70 |
e6pajB2 |
6PAJ |
605.1.1 |
0.885 |
0.0 |
0.0 |
5.3|5.3|1 |
0.738 |
0.959 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
2 |
1 |
yes:in |
yes:2 |
PF09328 |
U5DBK6 |
231-475 |
nD3 |
341-405 |
65 |
e2l4vA1 |
2L4V |
243.3.1 |
0.852 |
0.0 |
0.0 |
3.0|3.0|0 |
0.664 |
0.65 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
3 |
no |
no |
PF09353 |
E1Z213 |
62-322 |
nD1 |
61-330 |
270 |
e5eanA5 |
5EAN |
2004.1.1 |
0.937 |
0.0 |
0.127 |
6.4|7.7|1 |
0.845 |
1.211 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
6 |
10 |
no |
no |
PF09437 |
Q9HDU0 |
2-146 |
nD2 |
36-120 |
85 |
e1wrdA1 |
1WRD |
604.6.1 |
0.925 |
0.0 |
0.0 |
9.5|9.5|1 |
0.899 |
0.895 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
3 |
0 |
no |
yes:1 |
PF09462 |
A0A1B5KWF3 |
191-811 |
nD4 |
691-855 |
165 |
e6j6fA3 |
6J6F |
622.1.1 |
0.949 |
0.0 |
0.0 |
6.1|7.7|0 |
0.978 |
1.875 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
6 |
0 |
no |
no |
PF09509 |
A0A1E7HWH7 |
11-125 |
nD1 |
6-130 |
125 |
e2hsbA1 |
2HSB |
601.7.1 |
0.917 |
0.398 |
0.526 |
8.3|8.3|1 |
0.847 |
0.887 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
no |
PF09509 |
A0A0F4R4T6 |
11-126 |
nD1 |
1-130 |
130 |
e3brjA1 |
3BRJ |
3931.1.1 |
0.944 |
0.5 |
0.502 |
8.0|8.0|1 |
0.594 |
0.774 |
pymol |
more |
good_domain |
alpha bundles |
MtlR-like |
MtlR-like |
MtlR-like |
5 |
0 |
no |
no |
PF09521 |
D1B3R6 |
2-265 |
nD1 |
1-180,206-283 |
258 |
e3ndhA1 |
3NDH |
2008.1.1 |
0.914 |
0.0 |
0.437 |
6.8|6.8|1 |
0.791 |
1.265 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
11 |
no |
no |
PF09521 |
A0A2H9N0M3 |
4-267 |
nD1 |
1-175,206-285 |
255 |
e3ndhA1 |
3NDH |
2008.1.1 |
0.921 |
0.0 |
0.439 |
6.8|6.8|1 |
0.809 |
1.25 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
8 |
12 |
no |
no |
PF09521 |
A0A1J4RJR1 |
4-267 |
nD1 |
1-285 |
285 |
e3ndhA1 |
3NDH |
2008.1.1 |
0.939 |
0.0 |
0.439 |
6.9|6.9|1 |
0.8 |
1.397 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
8 |
14 |
no |
no |
PF09534 |
A0A4R0K4N0 |
10-175 |
nD1 |
1-155 |
155 |
e3kavC1 |
3KAV |
633.21.1 |
0.854 |
0.0 |
0.0 |
11.4|12.2|1 |
0.958 |
1.435 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
6 |
3 |
yes:in |
yes:3 |
PF09534 |
A0A3N2AVJ6 |
9-180 |
nD1 |
1-160 |
160 |
e6qvhA1 |
6QVH |
633.21.1 |
0.899 |
0.0 |
0.0 |
13.0|13.0|1 |
0.902 |
1.481 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
8 |
3 |
yes:in |
yes:3 |
PF09539 |
A0A256FVD9 |
1-90 |
nD1 |
1-85 |
85 |
e3solA1 |
3SOL |
3705.1.1 |
0.91 |
0.649 |
0.484 |
5.6|6.8|0 |
0.874 |
0.914 |
pymol |
more |
good_domain |
alpha arrays |
Bacterial chaperone lipoprotein (PulS_OutS) |
Bacterial chaperone lipoprotein (PulS_OutS) |
Bacterial chaperone lipoprotein (PulS_OutS) |
4 |
0 |
no |
no |
PF09543 |
A0A7Y6WTY1 |
1-118 |
nD1 |
1-120 |
120 |
e2vkjB1 |
2VKJ |
109.7.1 |
0.928 |
0.271 |
0.0 |
8.1|8.1|1 |
0.66 |
1.132 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Cytochrome c oxidase subunit E |
Cytochrome c oxidase subunit E |
6 |
0 |
no |
no |
PF09543 |
A0A3A8KLX1 |
4-119 |
nD1 |
1-120 |
120 |
e4malB1 |
4MAL |
109.4.1 |
0.932 |
0.905 |
0.91 |
6.4|8.0|0 |
0.924 |
0.42 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
0 |
no |
no |
PF09544 |
A0A0G2ZGP5 |
1-247 |
nD1 |
1-95 |
95 |
e2mw1A1 |
2MW1 |
11.1.1 |
0.948 |
0.0 |
0.848 |
5.4|8.9|0 |
0.863 |
0.88 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
no |
no |
PF09544 |
A0A511HNE7 |
2-253 |
nD1 |
1-95 |
95 |
e2yhgA6 |
2YHG |
11.1.1 |
0.874 |
0.0 |
0.865 |
4.9|8.3|0 |
0.825 |
0.88 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
7 |
no |
no |
PF09546 |
E6SL62 |
162-483 |
nD2 |
141-355,406-480 |
290 |
e1y1uB2 |
1Y1U |
603.2.1 |
0.912 |
0.0 |
0.0 |
7.9|7.9|1 |
0.896 |
1.638 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
8 |
0 |
no |
yes:7 |
PF09546 |
A0A7C8HHC5 |
61-382 |
nD1 |
26-385 |
360 |
e5oenB1 |
5OEN |
603.2.1 |
0.875 |
0.0 |
0.0 |
7.6|7.6|1 |
0.951 |
2.034 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
9 |
0 |
yes:out |
yes:8 |
PF09551 |
R5M0K8 |
28-152 |
nD1 |
27-173 |
147 |
e2ly311 |
2LY3 |
3121.1.1 |
0.857 |
0.515 |
0.0 |
4.0|4.0|1 |
0.861 |
1.75 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
3 |
6 |
yes:out |
no |
PF09551 |
R5PQ15 |
36-163 |
nD1 |
26-210 |
185 |
e2ly311 |
2LY3 |
3121.1.1 |
0.874 |
0.599 |
0.237 |
4.6|4.6|1 |
0.876 |
2.202 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
6 |
6 |
yes:out |
no |
PF09551 |
A0A1C5UGJ2 |
33-157 |
nD1 |
31-150 |
120 |
e2ly311 |
2LY3 |
3121.1.1 |
0.899 |
0.0 |
0.0 |
4.3|4.3|1 |
0.882 |
1.429 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
2 |
4 |
yes:out |
no |
PF09553 |
A0A090T7M8 |
47-240 |
nD1 |
6-270 |
265 |
e1gefA1 |
1GEF |
2008.1.1 |
0.919 |
0.689 |
0.998 |
4.8|11.5|1 |
0.808 |
1.299 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
10 |
10 |
no |
no |
PF09560 |
B9Y6Y1 |
130-218 |
nD2 |
41-130,151-210 |
150 |
e5iv5T1 |
5IV5 |
283.2.1 |
0.897 |
0.0 |
0.0 |
5.6|5.6|1 |
0.843 |
1.351 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
gpW/gp25-like |
gpW/gp25-like |
3 |
6 |
yes:out |
no |
PF09561 |
A6L7D1 |
6-359 |
nD1 |
1-360 |
360 |
e2fl3A1 |
2FL3 |
2008.1.1 |
0.897 |
0.0 |
0.181 |
5.6|6.2|1 |
0.799 |
1.765 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
11 |
16 |
no |
no |
PF09561 |
R5C7L1 |
2-363 |
nD1 |
1-155,301-315 |
170 |
e5a4oB1 |
5A4O |
295.1.1 |
0.88 |
0.0 |
0.0 |
2.6|4.4|1 |
0.866 |
1.393 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
10 |
no |
no |
PF09561 |
R5C7L1 |
2-363 |
nD2 |
156-284,316-365 |
179 |
e6dt7A1 |
6DT7 |
101.1.21 |
0.887 |
0.0 |
0.0 |
2.9|5.8|0 |
0.829 |
0.725 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
HTH in T7 RNA polymerase |
8 |
6 |
no |
no |
PF09567 |
A0A0C2ZL09 |
35-214 |
nD2 |
1-85,121-238 |
203 |
e3kskA1 |
3KSK |
2008.1.1 |
0.945 |
0.0 |
0.0 |
7.9|7.9|1 |
0.865 |
0.995 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
4 |
8 |
no |
no |
PF09567 |
A0A1M7YGR6 |
27-186 |
nD1 |
1-210 |
210 |
e3kskA1 |
3KSK |
2008.1.1 |
0.92 |
0.0 |
0.152 |
7.0|7.0|1 |
0.871 |
1.029 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
7 |
no |
no |
PF09568 |
H1YBH2 |
26-188 |
nD2 |
111-195 |
85 |
e2ostB1 |
2OST |
2008.1.1 |
0.887 |
0.0 |
0.431 |
5.4|5.7|0 |
0.739 |
0.417 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
2 |
5 |
no |
no |
PF09571 |
A5CYT2 |
13-317 |
nD1 |
21-155 |
135 |
e2h8rA1 |
2H8R |
101.1.4 |
0.912 |
0.315 |
0.941 |
3.4|3.4|1 |
0.898 |
1.731 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
7 |
0 |
no |
no |
PF09572 |
A0A496VTY2 |
51-295 |
nD1 |
11-160 |
150 |
e7vjoA1 |
7VJO |
101.1.4 |
0.899 |
0.0 |
0.0 |
2.9|14.7|0 |
0.729 |
1.923 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
7 |
2 |
no |
no |
PF09573 |
B5YJE3 |
8-238 |
nD1 |
1-255 |
255 |
e2ostB1 |
2OST |
2008.1.1 |
0.882 |
0.081 |
0.067 |
4.0|4.3|1 |
0.754 |
1.25 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
9 |
5 |
no |
no |
PF09577 |
A0A4U1DAW7 |
29-257 |
nD2 |
76-215 |
140 |
e4yuuQ21 |
4YUU |
601.18.1 |
0.935 |
0.368 |
0.532 |
11.0|11.0|1 |
0.884 |
1.094 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
5 |
0 |
yes:out |
yes:out |
PF09577 |
A0A3S0RK79 |
29-257 |
nD1 |
21-115 |
95 |
e4yuuQ21 |
4YUU |
601.18.1 |
0.865 |
0.0 |
0.0 |
11.5|11.5|1 |
0.859 |
0.742 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
4 |
0 |
yes:out |
yes:out |
PF09577 |
A0A3S0RK79 |
29-257 |
nD2 |
116-220 |
105 |
e4yuuQ21 |
4YUU |
601.18.1 |
0.943 |
0.461 |
0.615 |
11.1|11.1|1 |
0.907 |
0.82 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
3 |
0 |
yes:out |
yes:out |
PF09579 |
D7GWZ1 |
31-106 |
nD1 |
6-90 |
85 |
e6s9uA2 |
6S9U |
12.1.1 |
0.863 |
0.0 |
0.0 |
3.7|3.7|1 |
0.8 |
0.944 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
4 |
no |
no |
PF09582 |
E1RF85 |
13-202 |
nD2 |
136-210 |
75 |
e3fxtA1 |
3FXT |
328.12.1 |
0.857 |
0.0 |
0.0 |
7.6|7.6|1 |
0.744 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
IF3-like |
IF3-like domain in Nudix hydrolase |
IF3-like domain in Nudix hydrolase |
3 |
5 |
no |
no |
PF09582 |
A0A844J157 |
3-180 |
nD2 |
121-200 |
80 |
e3hz7A1 |
3HZ7 |
328.5.1 |
0.927 |
0.0 |
0.619 |
5.8|5.8|1 |
0.9 |
1.026 |
pymol |
more |
good_domain |
a+b two layers |
IF3-like |
SirA-like |
SirA-like |
2 |
4 |
no |
no |
PF09586 |
S1QYU6 |
15-841 |
nD4 |
591-605,761-830 |
85 |
e6i60B2 |
6I60 |
12.6.1 |
0.865 |
0.627 |
0.714 |
5.7|6.7|0 |
0.557 |
0.914 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycoside hydrolase family 127 middle domain-related |
Glycoside hydrolase family 127 middle domain-related |
1 |
9 |
no |
yes:out |
PF09591 |
Q8SVY8 |
41-242 |
nD2 |
26-260 |
235 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.899 |
0.0 |
0.0 |
7.8|7.8|1 |
0.857 |
1.391 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
6 |
0 |
no |
yes:7 |
PF09591 |
Q8SVF2 |
39-242 |
nD1 |
31-245 |
215 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.905 |
0.0 |
0.0 |
7.0|7.0|1 |
0.733 |
1.272 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
6 |
0 |
no |
yes:7 |
PF09599 |
P0CL47 |
46-397 |
nD2 |
186-230,291-365 |
120 |
e5y06A1 |
5Y06 |
3755.3.1 |
0.874 |
0.0 |
0.0 |
7.8|8.0|0 |
0.712 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF09601 |
A0A7W7JZ39 |
44-202 |
nD1 |
6-210 |
205 |
e2if6A1 |
2IF6 |
219.1.1 |
0.904 |
0.181 |
0.215 |
6.5|6.5|1 |
0.704 |
0.915 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
7 |
yes:in |
no |
PF09602 |
A0A6L8PBQ4 |
1-164 |
nD1 |
6-170 |
165 |
e4uosA1 |
4UOS |
601.19.1 |
0.926 |
0.0 |
0.862 |
12.3|12.3|1 |
0.894 |
0.685 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
3 |
0 |
no |
no |
PF09609 |
T2GE64 |
3-459 |
nD2 |
221-460 |
240 |
e6fjwA2 |
6FJW |
304.51.1 |
0.949 |
0.0 |
0.294 |
6.8|6.8|1 |
0.933 |
1.951 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
3 |
10 |
no |
no |
PF09609 |
Q74H39 |
4-537 |
nD1 |
1-245 |
245 |
e4n77A1 |
4N77 |
304.158.1 |
0.913 |
0.0 |
0.231 |
10.4|11.2|1 |
0.828 |
1.114 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR system Cas5 homologs |
CRISPR system Cas5 homologs |
7 |
9 |
yes:in |
no |
PF09609 |
Q74H39 |
4-537 |
nD2 |
246-405 |
160 |
e6fg9B3 |
6FG9 |
304.9.1 |
0.88 |
0.0 |
0.0 |
7.1|7.1|1 |
0.843 |
1.684 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
4 |
7 |
yes:out |
no |
PF09609 |
Q74H39 |
4-537 |
nD3 |
406-539 |
134 |
e4z7kB2 |
4Z7K |
304.51.1 |
0.937 |
0.0 |
0.294 |
6.7|6.7|1 |
0.856 |
1.089 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
2 |
4 |
yes:out |
no |
PF09609 |
Q6ARV9 |
7-434 |
nD1 |
16-90,111-210 |
175 |
e6c66M1 |
6C66 |
304.158.1 |
0.918 |
0.0 |
0.31 |
8.8|9.9|1 |
0.769 |
0.795 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR system Cas5 homologs |
CRISPR system Cas5 homologs |
5 |
7 |
no |
yes:out |
PF09609 |
Q6ARV9 |
7-434 |
nD2 |
216-335 |
120 |
e5yi6C1 |
5YI6 |
304.51.1 |
0.881 |
0.0 |
0.0 |
4.6|5.6|0 |
0.789 |
0.976 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
3 |
5 |
no |
yes:out |
PF09609 |
Q6ARV9 |
7-434 |
nD3 |
336-435 |
100 |
e7cszA2 |
7CSZ |
304.9.1 |
0.865 |
0.0 |
0.0 |
3.8|4.2|1 |
0.767 |
1.053 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
1 |
5 |
no |
yes:1 |
PF09621 |
G3XCW4 |
3-140 |
nD1 |
6-140 |
135 |
e6iufA1 |
6IUF |
213.1.1 |
0.917 |
0.0 |
0.359 |
9.1|9.1|1 |
0.93 |
0.821 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
4 |
7 |
no |
no |
PF09621 |
Q87P57 |
2-137 |
nD1 |
1-130 |
130 |
e6iufA1 |
6IUF |
213.1.1 |
0.923 |
0.0 |
0.0 |
8.2|8.2|1 |
0.926 |
0.79 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
4 |
7 |
no |
no |
PF09621 |
Q7N0W9 |
3-140 |
nD1 |
6-135 |
130 |
e6iufA1 |
6IUF |
213.1.1 |
0.915 |
0.0 |
0.0 |
8.7|8.7|1 |
0.923 |
0.79 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
4 |
7 |
no |
yes:1 |
PF09622 |
G4RGN5 |
17-275 |
nD1 |
16-275 |
260 |
e4umwA4 |
4UMW |
5073.1.2 |
0.868 |
0.0 |
0.0 |
4.6|4.6|1 |
0.383 |
0.864 |
pymol |
more |
good_domain |
alpha bundles |
Calcium ATPase transmembrane domain-related |
Calcium ATPase transmembrane domain-related |
Copper efflux ATPase transmembrane domain |
9 |
0 |
no |
yes:8 |
PF09652 |
N6ZTI6 |
4-93 |
nD1 |
1-90 |
90 |
e2v1cB6 |
2V1C |
2006.1.3 |
0.86 |
0.0 |
0.0 |
5.1|5.1|1 |
0.548 |
0.662 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
Toprim domain |
3 |
5 |
no |
no |
PF09652 |
A0A501X958 |
3-92 |
nD1 |
1-90 |
90 |
e2v1cB6 |
2V1C |
2006.1.3 |
0.861 |
0.0 |
0.0 |
4.9|4.9|1 |
0.548 |
0.662 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
Toprim domain |
3 |
5 |
no |
no |
PF09654 |
K9Y9G6 |
8-166 |
nD1 |
11-65 |
55 |
e3wwlA1 |
3WWL |
375.1.1 |
0.895 |
0.918 |
0.957 |
0.0|4.0|0 |
0.935 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
6 |
no |
no |
PF09654 |
A0A2N5JQE6 |
8-156 |
nD1 |
11-65 |
55 |
e3wwlA1 |
3WWL |
375.1.1 |
0.896 |
0.927 |
0.96 |
0.0|3.8|0 |
0.935 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
6 |
no |
no |
PF09654 |
A0A3C1M4L5 |
7-148 |
nD1 |
11-65 |
55 |
e3wwlA1 |
3WWL |
375.1.1 |
0.903 |
0.936 |
0.963 |
0.0|3.4|0 |
0.935 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
7 |
no |
no |
PF09660 |
R4LPJ0 |
21-494 |
nD2 |
131-300 |
170 |
e1fioA1 |
1FIO |
603.1.1 |
0.936 |
0.0 |
0.0 |
8.9|9.2|0 |
0.809 |
1.619 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
6 |
0 |
no |
no |
PF09661 |
A0A1H0BSG9 |
16-372 |
nD3 |
181-270 |
90 |
e3w6kC1 |
3W6K |
101.1.2 |
0.918 |
0.0 |
0.233 |
4.6|5.0|1 |
0.8 |
0.947 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF09661 |
A0A265N5K9 |
14-374 |
nD1 |
6-75 |
70 |
e3eukM1 |
3EUK |
3492.1.1 |
0.949 |
0.985 |
0.919 |
5.9|5.9|1 |
0.692 |
0.769 |
pymol |
more |
good_domain |
a+b two layers |
Chromosome partition protein mukE N-terminal domain |
Chromosome partition protein mukE N-terminal domain |
Chromosome partition protein mukE N-terminal domain |
2 |
3 |
no |
no |
PF09677 |
A0A518XJA4 |
18-110 |
nD2 |
31-110 |
80 |
e4r7yA5 |
4R7Y |
148.1.3 |
0.934 |
0.0 |
0.0 |
3.4|6.5|0 |
0.819 |
0.86 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
3 |
3 |
yes:out |
no |
PF09678 |
Q1H1C4 |
48-286 |
nD1 |
26-285 |
260 |
e7rdrC2 |
7RDR |
109.3.1 |
0.913 |
0.0 |
0.0 |
8.8|8.8|1 |
0.509 |
1.307 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
10 |
0 |
yes:out |
yes:7 |
PF09682 |
A0A0B3BDW3 |
3-96 |
nD2 |
31-100 |
70 |
e3e3vA3 |
3E3V |
101.35.1 |
0.928 |
0.0 |
0.0 |
7.1|8.6|0 |
1.0 |
1.458 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
0 |
no |
yes:out |
PF09688 |
A0A384L1J1 |
83-223 |
nD1 |
96-235 |
140 |
e4uxvA3 |
4UXV |
632.22.1 |
0.912 |
0.0 |
0.0 |
7.5|7.6|0 |
0.972 |
1.346 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
yes:out |
PF09692 |
M7SF80 |
22-405 |
nD1 |
41-90,136-200 |
115 |
e3nrwA1 |
3NRW |
186.1.1 |
0.885 |
0.14 |
0.228 |
5.5|5.5|1 |
0.86 |
1.065 |
pymol |
more |
good_domain |
alpha arrays |
lambda integrase-N-like |
lambda integrase-N |
lambda integrase-N |
6 |
0 |
no |
no |
PF09694 |
Q0KEV1 |
36-265 |
nD1 |
41-265 |
225 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.928 |
0.974 |
0.973 |
15.1|15.3|1 |
0.833 |
0.611 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
12 |
yes:out |
no |
PF09694 |
Q1GS13 |
28-251 |
nD1 |
16-250 |
235 |
e4pr7A1 |
4PR7 |
5084.5.1 |
0.937 |
0.978 |
0.98 |
16.2|16.2|0 |
0.751 |
0.639 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
12 |
yes:in |
no |
PF09702 |
A2BKJ1 |
13-106 |
nD1 |
6-105 |
100 |
e4u7eB2 |
4U7E |
604.12.1 |
0.856 |
0.0 |
0.0 |
5.8|7.7|0 |
0.959 |
1.156 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
5 |
0 |
no |
no |
PF09712 |
G7UP58 |
24-300 |
nD4 |
166-175,246-310 |
75 |
e6y07A1 |
6Y07 |
192.29.1 |
0.906 |
0.851 |
0.739 |
0.0|6.1|0 |
0.399 |
0.987 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
no |
PF09713 |
A0A165ZWJ8 |
1-50 |
nD1 |
1-50 |
50 |
e3g2bA1 |
3G2B |
101.1.2 |
0.853 |
0.0 |
0.592 |
4.1|4.7|1 |
0.803 |
0.526 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
0 |
no |
no |
PF09720 |
A0A418RMS8 |
12-64 |
nD1 |
1-30,36-70 |
65 |
e3zbeA1 |
3ZBE |
3801.1.1 |
0.882 |
0.758 |
0.78 |
0.0|3.7|0 |
0.508 |
1.354 |
pymol |
more |
good_domain |
extended segments |
ParE2-associated antitoxin 2 (PaaA2) |
ParE2-associated antitoxin 2 (PaaA2) |
ParE2-associated antitoxin 2 (PaaA2) |
4 |
0 |
no |
no |
PF09725 |
Q4N5G5 |
7-120 |
nD2 |
41-120 |
80 |
e4e1rB1 |
4E1R |
3380.1.1 |
0.853 |
0.0 |
0.0 |
3.1|3.1|1 |
0.714 |
1.429 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Dimerization domain of Lsr2 |
Dimerization domain of Lsr2 |
Dimerization domain of Lsr2 |
1 |
4 |
no |
no |
PF09728 |
G4MRI9 |
87-384 |
nD1 |
61-155,176-205,236-275 |
165 |
e6fkfp1 |
6FKF |
5046.1.1 |
0.942 |
0.237 |
0.0 |
6.8|6.8|1 |
0.647 |
1.061 |
pymol |
more |
good_domain |
extended segments |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
3 |
0 |
no |
no |
PF09744 |
M3ZIU1 |
21-168 |
nD1 |
6-65,71-130 |
120 |
e6tz4O1 |
6TZ4 |
3291.1.1 |
0.944 |
0.0 |
0.631 |
5.9|5.9|0 |
0.724 |
0.682 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
3 |
0 |
no |
no |
PF09746 |
E3MZJ2 |
54-462 |
nD2 |
56-110,361-525 |
220 |
e3txsA1 |
3TXS |
3713.1.1 |
0.853 |
0.0 |
0.0 |
6.4|6.4|1 |
0.854 |
2.472 |
pymol |
more |
good_domain |
alpha bundles |
Small terminase central domain |
Small terminase central domain |
Small terminase central domain |
7 |
0 |
no |
yes:6 |
PF09751 |
M3DAG1 |
31-448 |
nD1 |
36-90,361-375 |
70 |
e4b6xB1 |
4B6X |
192.1.1 |
0.886 |
0.0 |
0.0 |
4.9|4.9|0 |
0.955 |
0.972 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
4 |
1 |
no |
no |
PF09769 |
C4R233 |
41-163 |
nD1 |
46-155 |
110 |
e5iujE2 |
5IUJ |
605.1.1 |
0.942 |
0.0 |
0.0 |
4.1|4.7|0 |
0.91 |
1.507 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
no |
yes:1 |
PF09774 |
N1Q5D5 |
15-174 |
nD1 |
6-45,71-190 |
160 |
e1hx8A1 |
1HX8 |
604.6.1 |
0.852 |
0.0 |
0.0 |
6.2|6.4|0 |
0.905 |
1.684 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
6 |
0 |
no |
no |
PF09779 |
A0A5N4DDK8 |
8-133 |
nD1 |
6-50 |
45 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.882 |
0.879 |
0.883 |
0.0|2.4|0 |
0.826 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
yes:out |
PF09786 |
D7SKV7 |
17-679 |
nD1 |
36-110 |
75 |
e6qpqC1 |
6QPQ |
3922.1.1 |
0.926 |
0.0 |
0.0 |
8.3|8.4|0 |
0.729 |
0.581 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
3 |
0 |
no |
yes:2 |
PF09787 |
Q8TBA6 |
420-724 |
nD3 |
1-30,221-275,461-575 |
200 |
e6gapA2 |
6GAP |
3755.3.1 |
0.889 |
0.983 |
0.984 |
0.0|5.7|0 |
0.493 |
1.163 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:out |
PF09788 |
H2ZYG5 |
7-250 |
nD2 |
151-185 |
35 |
e7oqyP1 |
7OQY |
375.1.1 |
0.933 |
0.95 |
0.942 |
0.0|4.2|1 |
0.689 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
yes:out |
PF09788 |
F6ZD22 |
6-258 |
nD2 |
156-190 |
35 |
e3h0gX1 |
3H0G |
375.1.1 |
0.935 |
0.938 |
0.946 |
0.0|5.0|0 |
0.682 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
yes:out |
PF09792 |
B6Q7B4 |
227-367 |
nD2 |
216-375 |
160 |
e6jz1B3 |
6JZ1 |
10.1.2 |
0.878 |
0.0 |
0.096 |
6.8|6.9|1 |
0.8 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
11 |
yes:out |
no |
PF09793 |
A0A0K3CPV4 |
141-224 |
nD2 |
166-230 |
65 |
e1m5qW2 |
1M5Q |
3006.1.1 |
0.933 |
0.976 |
0.9 |
5.7|6.4|0 |
0.898 |
1.066 |
pymol |
more |
good_domain |
a+b two layers |
Sm-Like archaeal protein Smap3, C-terminal domain |
Sm-Like archaeal protein Smap3, C-terminal domain |
Sm-Like archaeal protein Smap3, C-terminal domain |
3 |
4 |
no |
no |
PF09799 |
A0A7S0T2H8 |
10-115 |
nD1 |
1-134 |
134 |
e2rldC1 |
2RLD |
633.10.1 |
0.88 |
0.0 |
0.0 |
12.0|12.0|1 |
0.955 |
1.165 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
4 |
0 |
no |
yes:4 |
PF09799 |
C1FJQ1 |
10-116 |
nD1 |
1-134 |
134 |
e2rldC1 |
2RLD |
633.10.1 |
0.879 |
0.0 |
0.0 |
11.8|11.8|1 |
0.955 |
1.165 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
4 |
0 |
no |
yes:4 |
PF09799 |
A0A7S0NNM4 |
10-116 |
nD1 |
1-134 |
134 |
e2rldC1 |
2RLD |
633.10.1 |
0.879 |
0.0 |
0.0 |
11.7|11.7|1 |
0.955 |
1.165 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
4 |
0 |
no |
yes:4 |
PF09801 |
Q28EU0 |
5-148 |
nD1 |
11-140 |
130 |
e5jwrF1 |
5JWR |
4982.1.1 |
0.888 |
0.0 |
0.0 |
5.8|5.8|1 |
0.862 |
1.268 |
pymol |
more |
good_domain |
alpha arrays |
KaiA/RbsU domain-like |
KaiA/RbsU domain |
KaiA/RbsU domain |
4 |
0 |
no |
yes:4 |
PF09804 |
Q0V1B2 |
27-300 |
nD2 |
176-330,361-380,406-450 |
220 |
e6ekkB2 |
6EKK |
2004.5.1 |
0.896 |
0.987 |
0.714 |
7.1|7.6|0 |
0.702 |
1.021 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
Differentially expressed in normal cells and neoplasia (DENN) domain |
Differentially expressed in normal cells and neoplasia (DENN) domain |
8 |
6 |
no |
no |
PF09814 |
B3MZV3 |
9-395 |
nD2 |
126-155,188-260 |
103 |
e1hxrA1 |
1HXR |
708.1.2 |
0.915 |
0.0 |
0.0 |
6.7|8.1|1 |
0.857 |
0.746 |
pymol |
more |
good_domain |
beta complex topology |
ETN0001 domain-like |
ETN0001 domain-like |
Mss4-like |
0 |
10 |
no |
no |
PF09814 |
Q59X25 |
5-333 |
nD1 |
91-135,172-250 |
124 |
e5j6pB1 |
5J6P |
708.1.2 |
0.905 |
0.61 |
0.248 |
7.5|7.5|1 |
0.813 |
0.899 |
pymol |
more |
good_domain |
beta complex topology |
ETN0001 domain-like |
ETN0001 domain-like |
Mss4-like |
3 |
9 |
no |
no |
PF09823 |
Q0AXX7 |
112-358 |
nD3 |
186-215,271-365 |
125 |
e3pdyB2 |
3PDY |
604.1.1 |
0.85 |
0.0 |
0.0 |
6.3|6.9|0 |
0.892 |
1.136 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
no |
PF09826 |
W8T7J1 |
199-726 |
nD2 |
146-165,196-555,561-735 |
555 |
e6tjhA1 |
6TJH |
5.1.4 |
0.892 |
0.93 |
0.995 |
14.4|14.4|1 |
0.901 |
1.546 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
4 |
37 |
yes:out |
no |
PF09828 |
A0A521UN31 |
182-311 |
nD3 |
171-320 |
150 |
e7d62B1 |
7D62 |
2006.1.2 |
0.862 |
0.0 |
0.614 |
9.8|9.8|1 |
0.663 |
0.701 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
DHH phosphoesterases |
5 |
4 |
no |
no |
PF09835 |
A0A0F9XX53 |
7-144 |
nD1 |
6-150 |
145 |
e4huqS1 |
4HUQ |
604.39.1 |
0.94 |
0.327 |
0.28 |
3.4|3.4|1 |
0.429 |
0.81 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
S-component of energy-coupling factor (ECF) transporters |
S-component of energy-coupling factor (ECF) transporters |
7 |
2 |
no |
yes:3 |
PF09839 |
M5DTB7 |
18-248 |
nD1 |
26-110 |
85 |
e5ok8B1 |
5OK8 |
872.10.1 |
0.926 |
0.0 |
0.0 |
5.1|5.1|1 |
0.745 |
0.78 |
pymol |
more |
good_domain |
a+b two layers |
Dodecin subunit-like |
Secreted protein HP1454 N-terminal domain |
Secreted protein HP1454 N-terminal domain |
3 |
3 |
yes:out |
no |
PF09839 |
A0A3S3ELX5 |
28-267 |
nD1 |
31-130 |
100 |
e3w1eA1 |
3W1E |
872.9.1 |
0.919 |
0.951 |
0.258 |
4.6|4.6|1 |
0.742 |
1.064 |
pymol |
more |
good_domain |
a+b two layers |
Dodecin subunit-like |
Flagella basal-body protein flgT N-terminal domain |
Flagella basal-body protein flgT N-terminal domain |
4 |
3 |
yes:out |
no |
PF09839 |
A0A3Q8ZIP5 |
28-267 |
nD1 |
21-130 |
110 |
e3w1eA1 |
3W1E |
872.9.1 |
0.906 |
0.951 |
0.258 |
4.7|4.7|1 |
0.763 |
1.17 |
pymol |
more |
good_domain |
a+b two layers |
Dodecin subunit-like |
Flagella basal-body protein flgT N-terminal domain |
Flagella basal-body protein flgT N-terminal domain |
4 |
3 |
yes:in |
no |
PF09839 |
A0A3Q8ZIP5 |
28-267 |
nD2 |
131-270 |
140 |
e7mx5A2 |
7MX5 |
7503.1.1 |
0.933 |
0.0 |
0.515 |
7.1|7.2|1 |
0.884 |
0.927 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
4 |
6 |
yes:out |
no |
PF09840 |
A0A662GZI0 |
12-198 |
nD2 |
76-200 |
125 |
e2cxiA4 |
2CXI |
101.1.9 |
0.852 |
0.868 |
0.92 |
5.4|5.4|1 |
0.875 |
1.429 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
6 |
6 |
no |
no |
PF09843 |
T0M368 |
11-568 |
nD3 |
221-535 |
315 |
e3axgC1 |
3AXG |
231.1.2 |
0.868 |
0.0 |
0.0 |
4.4|18.7|0 |
0.369 |
0.868 |
pymol |
more |
good_domain |
a+b two layers |
MocoBD/DmpA-related |
MocoBD/DmpA-related |
DmpA/ArgJ |
6 |
15 |
no |
yes:out |
PF09843 |
Q975B3 |
8-520 |
nD3 |
186-470 |
285 |
e1vz8B1 |
1VZ8 |
231.1.2 |
0.856 |
0.0 |
0.0 |
3.8|16.3|0 |
0.453 |
0.785 |
pymol |
more |
good_domain |
a+b two layers |
MocoBD/DmpA-related |
MocoBD/DmpA-related |
DmpA/ArgJ |
7 |
13 |
no |
yes:out |
PF09843 |
A0A419KPV6 |
15-562 |
nD1 |
1-180,546-569 |
204 |
e5cwcA1 |
5CWC |
159.1.2 |
0.85 |
0.0 |
0.0 |
7.6|7.6|1 |
0.679 |
2.217 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
7 |
1 |
no |
yes:7 |
PF09849 |
A4Z0T6 |
1-257 |
nD1 |
1-70 |
70 |
e4wv4B1 |
4WV4 |
148.1.1 |
0.922 |
0.0 |
0.0 |
4.2|4.2|1 |
0.73 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
3 |
0 |
no |
no |
PF09866 |
A0A7W7K1S5 |
16-55 |
nD1 |
6-60 |
55 |
e3j7901 |
3J79 |
377.1.1 |
0.9 |
0.0 |
0.914 |
4.3|4.3|1 |
0.715 |
1.1 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
2 |
6 |
no |
no |
PF09866 |
A0A437J4C9 |
19-59 |
nD1 |
6-65 |
60 |
e2n94A1 |
2N94 |
377.9.1 |
0.915 |
0.0 |
0.0 |
3.2|3.7|0 |
0.891 |
1.263 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
HIT/MYND zinc finger-like |
HIT/MYND zinc finger-like |
2 |
6 |
no |
no |
PF09866 |
A0A4V1ZZ45 |
16-55 |
nD1 |
6-65 |
60 |
e5nzvH6 |
5NZV |
376.1.1 |
0.931 |
0.0 |
0.0 |
2.8|4.4|0 |
0.831 |
0.769 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
2 |
6 |
no |
no |
PF09869 |
U6EBL0 |
7-174 |
nD1 |
6-100 |
95 |
e4fzoA1 |
4FZO |
632.11.1 |
0.916 |
0.0 |
0.0 |
8.1|8.8|0 |
0.899 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
AF1782-like |
AF1782-like |
3 |
0 |
no |
no |
PF09872 |
A0A1V4USX0 |
2-255 |
nD1 |
6-280 |
275 |
e6qgrB1 |
6QGR |
3740.1.1 |
0.949 |
0.857 |
0.892 |
10.2|10.2|1 |
0.527 |
0.945 |
pymol |
more |
good_domain |
alpha arrays |
F420-reducing hydrogenase subunit beta |
F420-reducing hydrogenase subunit beta |
F420-reducing hydrogenase subunit beta |
10 |
12 |
no |
no |
PF09874 |
A0A7C2LMZ8 |
44-235 |
nD2 |
171-235 |
65 |
e1t9hA1 |
1T9H |
2.1.1 |
0.925 |
0.0 |
0.82 |
7.0|7.0|1 |
0.811 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
5 |
no |
yes:out |
PF09875 |
Q57921 |
7-110 |
nD1 |
1-110 |
110 |
e5dz7A1 |
5DZ7 |
304.11.1 |
0.895 |
0.0 |
0.0 |
6.4|6.7|1 |
0.93 |
1.571 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Probable ACP-binding domain of malonyl-CoA ACP transacylase |
Probable ACP-binding domain of malonyl-CoA ACP transacylase |
4 |
4 |
no |
no |
PF09875 |
A0A832ZDK2 |
5-108 |
nD1 |
1-125 |
125 |
e4mz0A5 |
4MZ0 |
304.11.1 |
0.861 |
0.0 |
0.0 |
6.0|6.0|1 |
0.933 |
1.786 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Probable ACP-binding domain of malonyl-CoA ACP transacylase |
Probable ACP-binding domain of malonyl-CoA ACP transacylase |
4 |
4 |
no |
no |
PF09878 |
D3E3Z5 |
15-218 |
nD1 |
11-95 |
85 |
e6nbqE1 |
6NBQ |
3843.1.1 |
0.916 |
0.433 |
0.722 |
10.1|10.5|1 |
0.822 |
0.85 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF09881 |
A0A101J0U6 |
5-72 |
nD1 |
1-70 |
70 |
e7f9oP1 |
7F9O |
3843.1.1 |
0.929 |
0.728 |
0.944 |
10.5|10.7|0 |
0.739 |
0.7 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
yes:in |
yes:2 |
PF09883 |
A0A1H8NIH0 |
4-219 |
nD1 |
1-70 |
70 |
e4oi6B1 |
4OI6 |
304.4.1 |
0.864 |
0.0 |
0.0 |
5.6|5.6|1 |
0.806 |
0.636 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
2 |
4 |
no |
no |
PF09885 |
D5E860 |
2-144 |
nD1 |
6-145 |
140 |
e6enoA2 |
6ENO |
2007.1.14 |
0.87 |
0.972 |
0.975 |
5.6|8.2|0 |
0.833 |
0.972 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Chelatase-like |
5 |
3 |
no |
no |
PF09885 |
A0A7C4TKJ4 |
119-258 |
nD2 |
96-259 |
164 |
e6r3zA1 |
6R3Z |
2007.1.14 |
0.938 |
0.0 |
0.975 |
5.1|5.6|1 |
0.873 |
1.139 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Chelatase-like |
7 |
4 |
no |
no |
PF09889 |
Q8TXB3 |
6-63 |
nD1 |
6-55 |
50 |
e4v9fU1 |
4V9F |
377.1.1 |
0.854 |
0.975 |
0.977 |
0.0|3.7|0 |
0.628 |
1.0 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
yes:1 |
PF09889 |
Q2NEL5 |
4-62 |
nD1 |
6-40 |
35 |
e4ijjB1 |
4IJJ |
377.1.1 |
0.92 |
0.949 |
0.975 |
0.0|3.7|0 |
0.632 |
0.7 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
yes:out |
PF09900 |
Q39SB8 |
11-148 |
nD1 |
11-35,76-155 |
105 |
e4qpjB2 |
4QPJ |
605.1.1 |
0.889 |
0.0 |
0.0 |
7.3|8.6|0 |
0.389 |
1.438 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
4 |
0 |
yes:in |
no |
PF09911 |
C0M8R1 |
2-179 |
nD1 |
37-180 |
144 |
e3l6iA1 |
3L6I |
883.1.1 |
0.914 |
0.939 |
0.941 |
4.3|5.1|1 |
0.648 |
0.664 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
3 |
8 |
yes:out |
no |
PF09911 |
A0A1C3SMP8 |
1-176 |
nD1 |
36-180 |
145 |
e3l6iA1 |
3L6I |
883.1.1 |
0.919 |
0.928 |
0.935 |
4.4|5.3|1 |
0.664 |
0.668 |
pymol |
more |
good_domain |
a+b complex topology |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
Aha1/BPI domain-like |
3 |
8 |
no |
no |
PF09920 |
A0A075WDA7 |
2-177 |
nD1 |
1-175 |
175 |
e1yozB1 |
1YOZ |
4204.1.1 |
0.943 |
0.811 |
0.728 |
5.6|6.2|0 |
0.737 |
1.535 |
pymol |
more |
good_domain |
alpha bundles |
AF0941-like |
AF0941-like |
AF0941-like |
7 |
0 |
no |
no |
PF09923 |
B2IEH6 |
40-134 |
nD1 |
36-135 |
100 |
e4a4yA1 |
4A4Y |
73.1.1 |
0.871 |
0.0 |
0.0 |
2.7|2.7|1 |
0.508 |
0.833 |
pymol |
more |
good_domain |
beta sandwiches |
SMAD/FHA domain |
SMAD/FHA domain |
SMAD/FHA domain |
0 |
7 |
yes:out |
no |
PF09923 |
A0A357FID9 |
2-88 |
nD1 |
1-90 |
90 |
e4obiA1 |
4OBI |
714.1.1 |
0.851 |
0.0 |
0.0 |
5.2|5.2|1 |
0.817 |
1.071 |
pymol |
more |
good_domain |
beta sandwiches |
N-utilization substance G protein NusG, insert domain |
N-utilization substance G protein NusG, insert domain |
N-utilization substance G protein NusG, insert domain |
0 |
7 |
no |
no |
PF09925 |
I4AMH3 |
17-161 |
nD2 |
51-265,306-330 |
240 |
e5cwnA1 |
5CWN |
109.3.1 |
0.915 |
0.0 |
0.0 |
10.7|10.7|1 |
0.686 |
1.206 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
9 |
0 |
no |
yes:9 |
PF09925 |
B2KEA2 |
12-147 |
nD3 |
61-270,276-305 |
240 |
e6j6gd1 |
6J6G |
109.4.1 |
0.932 |
0.0 |
0.0 |
7.4|8.8|0 |
0.61 |
0.839 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
0 |
no |
yes:9 |
PF09930 |
Q8TZ72 |
151-374 |
nD3 |
136-335 |
200 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.944 |
0.968 |
0.933 |
5.6|9.1|0 |
0.626 |
0.966 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
yes:out |
yes:6 |
PF09930 |
A0A533ML19 |
7-221 |
nD1 |
1-185 |
185 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.859 |
0.952 |
0.939 |
4.3|6.3|0 |
0.581 |
0.894 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF09933 |
A0A125NTR4 |
4-159 |
nD1 |
1-160 |
160 |
e2rldC1 |
2RLD |
633.10.1 |
0.876 |
0.0 |
0.0 |
10.0|10.0|1 |
0.955 |
1.391 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
5 |
0 |
yes:in |
yes:3 |
PF09933 |
A0A6I3KQ12 |
4-158 |
nD1 |
1-160 |
160 |
e2rldC1 |
2RLD |
633.10.1 |
0.876 |
0.0 |
0.0 |
10.0|10.0|1 |
0.955 |
1.391 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
5 |
0 |
yes:in |
yes:3 |
PF09935 |
E8U7W2 |
26-267 |
nD1 |
26-240 |
215 |
e7eu311 |
7EU3 |
881.1.1 |
0.938 |
0.42 |
0.871 |
6.4|7.2|1 |
0.918 |
1.307 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
6 |
10 |
yes:out |
yes:out |
PF09935 |
H5WVJ1 |
43-277 |
nD1 |
31-250 |
220 |
e6kacp1 |
6KAC |
881.1.1 |
0.948 |
0.512 |
0.879 |
7.7|9.1|1 |
0.866 |
1.337 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
6 |
12 |
yes:out |
yes:out |
PF09937 |
A0A545TGN0 |
23-309 |
nD2 |
1-40,62-110,256-330 |
164 |
e4eibB2 |
4EIB |
11.1.1 |
0.917 |
0.0 |
0.102 |
2.8|3.1|1 |
0.892 |
1.519 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
12 |
no |
no |
PF09945 |
A4YT05 |
11-129 |
nD1 |
6-135 |
130 |
e4xu5A1 |
4XU5 |
1015.1.1 |
0.936 |
0.319 |
0.0 |
5.7|5.7|1 |
0.557 |
0.674 |
pymol |
more |
good_domain |
alpha complex topology |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
4 |
0 |
no |
yes:4 |
PF09946 |
A0A399RNH3 |
12-122 |
nD1 |
1-135 |
135 |
e6egcA1 |
6EGC |
192.29.1 |
0.889 |
0.0 |
0.0 |
6.6|6.6|1 |
0.705 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF09947 |
A0A2Z4JAU3 |
1-64 |
nD1 |
1-35,56-65 |
45 |
e2a20A1 |
2A20 |
376.1.3 |
0.926 |
0.0 |
0.79 |
5.5|5.5|1 |
0.768 |
0.687 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
FYVE/PHD zinc finger |
1 |
2 |
no |
no |
PF09947 |
A0A3A9ZQU6 |
1-62 |
nD1 |
1-30,51-65 |
45 |
e1vfyA1 |
1VFY |
376.1.3 |
0.933 |
0.0 |
0.855 |
6.0|6.0|1 |
0.775 |
0.687 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
FYVE/PHD zinc finger |
1 |
2 |
no |
no |
PF09952 |
A0LN51 |
203-350 |
nD3 |
231-350 |
120 |
e5uvdA1 |
5UVD |
316.1.1 |
0.928 |
0.0 |
0.312 |
9.1|10.2|1 |
0.734 |
0.694 |
pymol |
na |
good_domain |
a+b three layers |
Nucleotidyltransferase-like |
Nucleotidyltransferase |
Nucleotidyltransferase |
5 |
5 |
no |
no |
PF09954 |
Q1QXQ1 |
32-91 |
nD1 |
31-80 |
50 |
e2kvtA1 |
2KVT |
252.3.1 |
0.906 |
0.684 |
0.0 |
3.7|3.7|1 |
0.592 |
0.704 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
Uncharacterized protein yaiA |
Uncharacterized protein yaiA |
1 |
4 |
no |
no |
PF09954 |
A0A2M8EW71 |
4-63 |
nD1 |
1-63 |
63 |
e2kvtA1 |
2KVT |
252.3.1 |
0.914 |
0.832 |
0.0 |
4.6|4.6|1 |
0.634 |
0.887 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
Uncharacterized protein yaiA |
Uncharacterized protein yaiA |
1 |
5 |
no |
no |
PF09958 |
Q4J8Q6 |
3-227 |
nD1 |
1-228 |
228 |
e2l6jA1 |
2L6J |
109.4.1 |
0.938 |
0.0 |
0.0 |
3.7|4.5|1 |
0.851 |
0.797 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF09958 |
A0A832TNU8 |
3-226 |
nD1 |
1-225 |
225 |
e4cekA2 |
4CEK |
109.4.1 |
0.906 |
0.0 |
0.0 |
4.8|4.8|1 |
0.689 |
0.787 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF09958 |
F0NIM0 |
3-227 |
nD1 |
1-225 |
225 |
e3juiA1 |
3JUI |
109.4.1 |
0.854 |
0.0 |
0.0 |
4.0|4.5|1 |
0.625 |
0.787 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF09961 |
Q9I4I6 |
6-121 |
nD1 |
21-120 |
100 |
e6mvhA4 |
6MVH |
11.1.1 |
0.948 |
0.0 |
0.653 |
5.4|6.0|1 |
0.804 |
0.926 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
8 |
yes:out |
no |
PF09961 |
A0A261UNT2 |
7-115 |
nD1 |
16-115 |
100 |
e4i3gA3 |
4I3G |
11.1.1 |
0.931 |
0.0 |
0.688 |
5.7|5.7|1 |
0.791 |
0.926 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
no |
no |
PF09961 |
A9I7W6 |
2-113 |
nD1 |
11-114 |
104 |
e4i3gA3 |
4I3G |
11.1.1 |
0.926 |
0.0 |
0.612 |
6.1|6.1|1 |
0.791 |
0.963 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:in |
no |
PF09962 |
A0A3C1BCK1 |
3-62 |
nD1 |
1-63 |
63 |
e3ntkA2 |
3NTK |
4.1.1 |
0.933 |
0.0 |
0.946 |
4.1|4.5|1 |
0.842 |
0.787 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
4 |
no |
no |
PF09963 |
Q5WFC6 |
1-54 |
nD1 |
1-45 |
45 |
e5fmfR2 |
5FMF |
375.1.1 |
0.922 |
0.919 |
0.952 |
0.0|3.2|0 |
0.857 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
2 |
no |
no |
PF09963 |
W4QKK0 |
1-51 |
nD1 |
1-45 |
45 |
e5fmfR2 |
5FMF |
375.1.1 |
0.926 |
0.938 |
0.961 |
0.0|3.4|0 |
0.881 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
2 |
no |
no |
PF09969 |
A0A4Q7UI84 |
1-116 |
nD1 |
1-115 |
115 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.923 |
0.0 |
0.0 |
5.5|5.5|0 |
0.945 |
1.565 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
6 |
no |
no |
PF09969 |
A0A0H5CEE9 |
1-116 |
nD1 |
1-115 |
115 |
e3layJ1 |
3LAY |
3711.1.1 |
0.905 |
0.867 |
0.638 |
5.4|5.4|1 |
0.846 |
1.036 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
2 |
6 |
no |
no |
PF09969 |
A0A3N2P9J4 |
1-116 |
nD1 |
1-115 |
115 |
e2eulD1 |
2EUL |
192.1.1 |
0.857 |
0.0 |
0.0 |
5.1|5.3|0 |
0.933 |
1.597 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
3 |
6 |
no |
no |
PF09973 |
A1RYG7 |
8-241 |
nD2 |
56-85,166-243 |
108 |
e3dcxA1 |
3DCX |
220.1.1 |
0.917 |
0.411 |
0.549 |
5.5|7.0|1 |
0.841 |
0.885 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
yes:out |
yes:out |
PF09973 |
A0A0F7FIU4 |
8-239 |
nD3 |
51-90,166-245 |
120 |
e3dcxA1 |
3DCX |
220.1.1 |
0.861 |
0.301 |
0.356 |
6.2|7.9|1 |
0.841 |
0.984 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
yes:out |
yes:out |
PF09977 |
Q1H0T4 |
54-147 |
nD1 |
31-155 |
125 |
e1ihoB3 |
1IHO |
283.1.1 |
0.861 |
0.0 |
0.0 |
5.8|6.7|1 |
0.802 |
0.487 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
Creatinase/aminopeptidase |
Creatinase/aminopeptidase |
2 |
4 |
no |
yes:out |
PF09980 |
A0A2K3AKM5 |
4-149 |
nD1 |
1-150 |
150 |
e5doqA1 |
5DOQ |
5069.1.1 |
0.935 |
0.375 |
0.46 |
10.9|12.3|0 |
0.846 |
0.708 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:4 |
PF09980 |
A0A7Y2C1K9 |
6-144 |
nD1 |
1-145 |
145 |
e6w70A1 |
6W70 |
3684.1.1 |
0.871 |
0.0 |
0.0 |
13.2|13.2|1 |
0.965 |
1.151 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
4 |
3 |
no |
yes:4 |
PF09980 |
A0A2D8C1U6 |
3-143 |
nD1 |
1-145 |
145 |
e6w70A1 |
6W70 |
3684.1.1 |
0.871 |
0.0 |
0.0 |
13.3|13.3|1 |
0.965 |
1.151 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
4 |
2 |
no |
yes:4 |
PF09987 |
Q57628 |
1-388 |
nD3 |
291-395 |
105 |
e1yj7D1 |
1YJ7 |
327.13.1 |
0.916 |
0.846 |
0.622 |
9.2|9.2|1 |
0.87 |
1.029 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif I in type III secretion system |
Ring-building motif I in type III secretion system |
3 |
3 |
no |
no |
PF09990 |
A0A4V6TT29 |
5-145 |
nD1 |
6-145 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.926 |
0.0 |
0.0 |
12.2|12.2|1 |
0.929 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
yes:4 |
PF09990 |
A0A7J5DUP8 |
5-146 |
nD1 |
6-148 |
143 |
e6egcA1 |
6EGC |
192.29.1 |
0.925 |
0.0 |
0.0 |
12.2|12.2|1 |
0.929 |
1.882 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
yes:4 |
PF09990 |
A0A249KBS9 |
31-166 |
nD1 |
1-165 |
165 |
e2l10A1 |
2L10 |
601.1.1 |
0.912 |
0.0 |
0.0 |
13.2|13.3|0 |
0.979 |
1.26 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
1 |
yes:in |
yes:4 |
PF10003 |
A0A1J0DDS5 |
6-139 |
nD2 |
1-10,66-140 |
85 |
e5l04A4 |
5L04 |
220.1.1 |
0.893 |
0.0 |
0.0 |
6.8|8.3|1 |
0.831 |
0.697 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
7 |
no |
yes:out |
PF10003 |
A0A2M8VZ72 |
6-140 |
nD2 |
1-10,66-140 |
85 |
e4iapB2 |
4IAP |
220.1.1 |
0.893 |
0.0 |
0.0 |
5.9|8.6|1 |
0.878 |
0.697 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
7 |
no |
yes:out |
PF10004 |
A0A7Z2FV73 |
8-171 |
nD2 |
86-174 |
89 |
e6egcA1 |
6EGC |
192.29.1 |
0.907 |
0.0 |
0.0 |
4.0|4.0|1 |
0.536 |
1.171 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF10005 |
C5ATF8 |
3-94 |
nD1 |
1-60 |
60 |
e5k2mF1 |
5K2M |
375.1.1 |
0.906 |
0.948 |
0.966 |
2.3|3.4|0 |
0.797 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF10005 |
A0A4R0X4Y1 |
4-97 |
nD1 |
1-80 |
80 |
e4akrA3 |
4AKR |
4050.1.1 |
0.897 |
0.0 |
0.0 |
2.1|2.1|1 |
0.899 |
1.616 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-barrel domain in Capz |
beta-barrel domain in Capz |
beta-barrel domain in Capz |
1 |
5 |
no |
no |
PF10005 |
A0A514KPY0 |
3-95 |
nD1 |
1-75 |
75 |
e3wwlA1 |
3WWL |
375.1.1 |
0.887 |
0.925 |
0.967 |
2.5|2.5|1 |
0.745 |
1.339 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
no |
PF10011 |
F5Z1C2 |
11-374 |
nD3 |
161-185,281-420 |
165 |
e5cwlA1 |
5CWL |
109.3.1 |
0.914 |
0.0 |
0.0 |
11.0|11.0|1 |
0.712 |
0.829 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
1 |
yes:out |
yes:out |
PF10011 |
E0TFZ9 |
13-391 |
nD3 |
176-200,306-455 |
175 |
e5mdtA1 |
5MDT |
109.4.1 |
0.902 |
0.0 |
0.0 |
7.9|13.6|0 |
0.808 |
0.612 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
yes:out |
PF10011 |
A0A512CIE1 |
13-384 |
nD3 |
166-190,291-433 |
168 |
e5cwlA1 |
5CWL |
109.3.1 |
0.928 |
0.0 |
0.0 |
14.1|14.1|1 |
0.74 |
0.844 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
1 |
no |
yes:out |
PF10027 |
A0A176EY99 |
8-156 |
nD1 |
6-159 |
154 |
e5doqA1 |
5DOQ |
5069.1.1 |
0.888 |
0.42 |
0.873 |
12.3|14.2|0 |
0.919 |
0.726 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:4 |
PF10032 |
A0A367KWE6 |
20-193 |
nD1 |
6-165 |
160 |
e7d2wB1 |
7D2W |
3871.1.1 |
0.891 |
0.0 |
0.0 |
6.9|6.9|1 |
0.847 |
1.074 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
PHIST |
PHIST |
PHIST |
5 |
2 |
no |
yes:2 |
PF10032 |
A0A1X0QZ59 |
21-191 |
nD1 |
6-65,91-160 |
130 |
e7d2wB1 |
7D2W |
3871.1.1 |
0.918 |
0.0 |
0.0 |
6.9|6.9|1 |
0.809 |
0.872 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
PHIST |
PHIST |
PHIST |
4 |
1 |
no |
yes:3 |
PF10039 |
I4A655 |
67-291 |
nD2 |
106-235 |
130 |
e1vr8A1 |
1VR8 |
881.2.1 |
0.865 |
0.263 |
0.0 |
5.3|5.3|1 |
0.75 |
1.0 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
TM1622-like |
TM1622-like |
4 |
4 |
no |
yes:out |
PF10039 |
W9E9R6 |
53-245 |
nD2 |
121-380 |
260 |
e6jauA2 |
6JAU |
881.4.1 |
0.897 |
0.973 |
0.977 |
5.6|6.5|0 |
0.89 |
2.453 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
C-terminal domain in sigma-E factor regulatory protein rseB |
C-terminal domain in sigma-E factor regulatory protein rseB |
8 |
14 |
no |
yes:out |
PF10042 |
L2GKS2 |
22-233 |
nD1 |
21-95,126-180,206-235 |
160 |
e2cczA1 |
2CCZ |
2.1.1 |
0.946 |
0.0 |
0.0 |
5.6|6.1|1 |
0.901 |
1.538 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
9 |
no |
no |
PF10042 |
A0A2A7SJ57 |
1-210 |
nD1 |
1-78,101-213 |
191 |
e3k7uC1 |
3K7U |
2.1.1 |
0.936 |
0.0 |
0.0 |
6.0|6.0|1 |
0.942 |
1.837 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
10 |
no |
no |
PF10042 |
F2LP19 |
1-210 |
nD1 |
1-79,101-213 |
192 |
e1u5kA1 |
1U5K |
2.1.1 |
0.945 |
0.0 |
0.0 |
3.9|6.0|1 |
0.995 |
1.846 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
10 |
no |
no |
PF10045 |
A0A7X1KBM5 |
1-99 |
nD1 |
6-75 |
70 |
e4u7bG2 |
4U7B |
101.1.1 |
0.86 |
0.723 |
0.911 |
5.6|6.7|0 |
0.931 |
0.959 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF10045 |
A0A3G2IHS6 |
1-102 |
nD1 |
6-70,76-120 |
110 |
e2ao9A1 |
2AO9 |
101.1.1 |
0.924 |
0.0 |
0.915 |
5.1|5.9|0 |
0.832 |
1.507 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF10045 |
A0A4R8KTX5 |
1-102 |
nD1 |
6-70 |
65 |
e4u7bG2 |
4U7B |
101.1.1 |
0.928 |
0.77 |
0.92 |
5.1|5.7|0 |
0.931 |
0.89 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF10049 |
A0A0F9NRJ3 |
7-52 |
nD1 |
1-75 |
75 |
e2v3aA3 |
2V3A |
244.2.1 |
0.877 |
0.0 |
0.0 |
3.8|3.8|1 |
0.667 |
0.61 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
FAD/NAD-linked reduatases, dimerisation (C-terminal) domain |
FAD/NAD-linked reduatases, dimerisation (C-terminal) domain |
2 |
5 |
no |
no |
PF10058 |
Q1KKT4 |
256-306 |
nD2 |
271-310 |
40 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.923 |
0.856 |
0.91 |
0.0|0.0|0 |
0.794 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
yes:out |
PF10065 |
Q9PCV6 |
3-269 |
nD1 |
41-110,236-270 |
105 |
e7nfxk1 |
7NFX |
896.1.1 |
0.92 |
0.0 |
0.0 |
6.8|6.8|1 |
0.948 |
1.373 |
pymol |
more |
good_domain |
a+b two layers |
SRP9/14-like |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
2 |
6 |
no |
no |
PF10065 |
A0A1V0ULU1 |
28-274 |
nD1 |
46-125,241-275 |
115 |
e7oldLk1 |
7OLD |
896.1.1 |
0.933 |
0.0 |
0.0 |
5.3|5.3|1 |
0.933 |
1.503 |
pymol |
more |
good_domain |
a+b two layers |
SRP9/14-like |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
3 |
6 |
no |
no |
PF10067 |
A1T4Q0 |
43-202 |
nD1 |
6-205 |
200 |
e1kqfC1 |
1KQF |
5069.1.1 |
0.873 |
0.659 |
0.876 |
5.8|7.8|1 |
0.837 |
0.943 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
5 |
0 |
yes:in |
yes:5 |
PF10067 |
A0A6N4SRS6 |
10-157 |
nD1 |
6-160 |
155 |
e4o7gB1 |
4O7G |
5069.1.1 |
0.884 |
0.829 |
0.932 |
6.2|8.0|0 |
0.694 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
0 |
no |
yes:5 |
PF10069 |
K9RDC9 |
6-125 |
nD1 |
11-190 |
180 |
e1xdoB3 |
1XDO |
300.1.1 |
0.924 |
0.0 |
0.0 |
9.4|9.5|1 |
0.846 |
0.96 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
4 |
7 |
no |
no |
PF10069 |
B8HRM7 |
6-124 |
nD1 |
6-190 |
185 |
e3qphA1 |
3QPH |
300.1.1 |
0.901 |
0.0 |
0.0 |
8.7|8.7|1 |
0.857 |
0.987 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
5 |
7 |
no |
no |
PF10070 |
I3Z7B2 |
10-749 |
nD4 |
26-90,246-275,606-665,716-769 |
209 |
e2fgyA3 |
2FGY |
4126.1.1 |
0.914 |
0.0 |
0.0 |
5.8|5.9|1 |
0.786 |
0.991 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
beta-carbonic anhydrase-like |
beta-carbonic anhydrase |
beta-carbonic anhydrase |
7 |
5 |
no |
no |
PF10070 |
Q13DE9 |
20-768 |
nD1 |
11-25,121-290,701-710 |
195 |
e5hjnA2 |
5HJN |
524.1.1 |
0.915 |
0.0 |
0.0 |
2.9|2.9|1 |
0.648 |
1.327 |
pymol |
more |
good_domain |
alpha arrays |
Ypt/Rab-GAP domain of gyp1p-like |
Ypt/Rab-GAP domain of gyp1p |
Ypt/Rab-GAP domain of gyp1p |
9 |
2 |
no |
no |
PF10070 |
Q13DE9 |
20-768 |
nD3 |
41-108,291-315,626-690,731-795 |
223 |
e3lasA1 |
3LAS |
4126.1.1 |
0.884 |
0.0 |
0.0 |
5.5|6.1|1 |
0.57 |
1.057 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
beta-carbonic anhydrase-like |
beta-carbonic anhydrase |
beta-carbonic anhydrase |
8 |
7 |
no |
no |
PF10070 |
Q160K9 |
17-762 |
nD4 |
46-103,286-310,621-690,716-785 |
223 |
e3lasA1 |
3LAS |
4126.1.1 |
0.887 |
0.0 |
0.0 |
4.9|6.6|1 |
0.558 |
1.057 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
beta-carbonic anhydrase-like |
beta-carbonic anhydrase |
beta-carbonic anhydrase |
9 |
7 |
no |
no |
PF10076 |
A8FGN9 |
5-149 |
nD1 |
1-85 |
85 |
e5iv5A3 |
5IV5 |
1049.2.1 |
0.935 |
0.437 |
0.43 |
2.8|2.8|1 |
0.697 |
0.697 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Baseplate wedge protein gp7 helical domain-like |
Baseplate wedge protein gp6 helical domain |
Baseplate wedge protein gp6 helical domain |
4 |
0 |
no |
no |
PF10076 |
A8FGN9 |
5-149 |
nD2 |
91-155 |
65 |
e5ywwA3 |
5YWW |
327.11.1 |
0.893 |
0.0 |
0.0 |
3.3|3.3|1 |
0.952 |
0.726 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Prokaryotic type KH domain (KH-domain type II) |
3 |
3 |
no |
no |
PF10076 |
Q8EDP0 |
11-192 |
nD1 |
1-95 |
95 |
e5iv5A3 |
5IV5 |
1049.2.1 |
0.888 |
0.854 |
0.801 |
4.0|4.0|1 |
0.566 |
0.779 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Baseplate wedge protein gp7 helical domain-like |
Baseplate wedge protein gp6 helical domain |
Baseplate wedge protein gp6 helical domain |
4 |
0 |
no |
no |
PF10077 |
A0A2S8FFR8 |
1-112 |
nD1 |
1-120 |
120 |
e1kk8A1 |
1KK8 |
4.1.1 |
0.91 |
0.0 |
0.0 |
3.6|4.7|0 |
0.997 |
1.5 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
4 |
7 |
no |
no |
PF10077 |
A0A836M0S7 |
1-134 |
nD1 |
6-95 |
90 |
e2qasA1 |
2QAS |
4.1.2 |
0.9 |
0.0 |
0.0 |
3.0|3.2|0 |
0.716 |
0.807 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
Stringent starvation protein B, SspB |
2 |
4 |
no |
no |
PF10082 |
B6IYH0 |
38-407 |
nD1 |
11-409 |
399 |
e6zhpB1 |
6ZHP |
5084.5.1 |
0.924 |
0.993 |
0.995 |
16.1|18.5|0 |
0.855 |
1.084 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
19 |
yes:in |
no |
PF10082 |
D0WY09 |
13-376 |
nD1 |
41-380 |
340 |
e4aiqA1 |
4AIQ |
5084.5.3 |
0.939 |
0.99 |
0.995 |
15.9|17.1|0 |
0.758 |
0.601 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
2 |
17 |
no |
no |
PF10083 |
Q2RQ80 |
14-169 |
nD2 |
96-170 |
75 |
e2qzgB1 |
2QZG |
633.12.1 |
0.868 |
0.0 |
0.0 |
4.7|4.7|1 |
0.742 |
0.852 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Ta0600-like |
Ta0600-like |
5 |
1 |
no |
no |
PF10084 |
A0A2V4ES52 |
3-99 |
nD1 |
1-104 |
104 |
e2qhqB1 |
2QHQ |
3438.1.1 |
0.934 |
0.965 |
0.966 |
6.3|8.5|0 |
0.679 |
0.852 |
pymol |
more |
good_domain |
alpha arrays |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
5 |
4 |
no |
no |
PF10084 |
A0A2G6TYR5 |
3-101 |
nD1 |
1-105 |
105 |
e2qhqB1 |
2QHQ |
3438.1.1 |
0.912 |
0.968 |
0.969 |
6.0|7.9|0 |
0.696 |
0.861 |
pymol |
more |
good_domain |
alpha arrays |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
3 |
4 |
yes:in |
no |
PF10084 |
A0A3G8H8A7 |
8-105 |
nD1 |
1-109 |
109 |
e2qhqB1 |
2QHQ |
3438.1.1 |
0.924 |
0.969 |
0.971 |
6.4|8.1|0 |
0.723 |
0.893 |
pymol |
more |
good_domain |
alpha arrays |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
Unknown function protein VPA0580 |
2 |
4 |
no |
no |
PF10095 |
I3YFP9 |
28-357 |
nD1 |
31-228,261-355 |
293 |
e6jboA1 |
6JBO |
3719.1.1 |
0.852 |
0.0 |
0.0 |
7.5|8.0|1 |
0.717 |
0.921 |
pymol |
na |
good_domain |
alpha bundles |
Imelysin peptidase-like |
Imelysin peptidase-like |
Imelysin peptidase-like |
10 |
1 |
no |
yes:1 |
PF10098 |
Q0ARB2 |
88-351 |
nD2 |
221-363 |
143 |
e4fhrB4 |
4FHR |
531.1.1 |
0.861 |
0.616 |
0.362 |
2.4|3.0|0 |
0.626 |
1.075 |
pymol |
more |
good_domain |
alpha arrays |
Domains of FliG |
C-terminal domain of FliG |
C-terminal domain of FliG |
9 |
0 |
no |
no |
PF10101 |
Q89S56 |
120-886 |
nD2 |
666-855 |
190 |
e3zpjA1 |
3ZPJ |
109.4.1 |
0.937 |
0.0 |
0.0 |
7.5|9.0|0 |
0.408 |
0.664 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
2 |
no |
yes:6 |
PF10102 |
A6UVB3 |
274-361 |
nD2 |
231-330 |
100 |
e5axhB3 |
5AXH |
12.1.1 |
0.929 |
0.0 |
0.0 |
4.7|6.4|1 |
0.713 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
2 |
6 |
no |
yes:out |
PF10102 |
A8AAN6 |
349-425 |
nD3 |
311-405,586-595 |
105 |
e3bvxA5 |
3BVX |
12.1.1 |
0.905 |
0.0 |
0.0 |
7.1|7.1|1 |
0.56 |
1.167 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
7 |
yes:out |
no |
PF10102 |
A0A1V5WU17 |
12-93 |
nD1 |
6-250 |
245 |
e2vy0A1 |
2VY0 |
10.1.1 |
0.949 |
0.943 |
0.913 |
18.0|19.7|1 |
0.87 |
1.145 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
1 |
19 |
no |
no |
PF10104 |
L7JU74 |
2-126 |
nD2 |
31-105 |
75 |
e5fd9A1 |
5FD9 |
3291.1.1 |
0.931 |
0.0 |
0.0 |
5.8|5.8|1 |
0.69 |
0.426 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
3 |
0 |
no |
yes:out |
PF10107 |
E1RKJ5 |
9-171 |
nD3 |
86-170 |
85 |
e4qbnA1 |
4QBN |
2008.1.1 |
0.891 |
0.844 |
0.937 |
4.3|4.3|1 |
0.752 |
0.417 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
2 |
3 |
no |
yes:out |
PF10109 |
A0A6S5X4B5 |
3-80 |
nD1 |
1-80 |
80 |
e2ob9A1 |
2OB9 |
6050.1.1 |
0.941 |
0.639 |
0.681 |
3.8|3.8|1 |
0.581 |
0.702 |
pymol |
more |
good_domain |
a+b two layers |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
2 |
3 |
no |
no |
PF10110 |
Q03U33 |
7-322 |
nD1 |
1-215 |
215 |
e3tx3A1 |
3TX3 |
5076.2.1 |
0.924 |
0.627 |
0.648 |
6.0|6.9|0 |
0.679 |
0.927 |
pymol |
more |
good_domain |
alpha complex topology |
Mitochondrial ADP/ATP carrier-like |
Putative sulfate permease CysZ |
Putative sulfate permease CysZ |
8 |
0 |
no |
yes:4 |
PF10110 |
Q03U33 |
7-322 |
nD2 |
216-285,316-335,576-590 |
105 |
e4wa6B1 |
4WA6 |
4336.2.1 |
0.853 |
0.0 |
0.0 |
4.8|5.3|1 |
0.732 |
1.123 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
YheA/YmcA-like |
Protein SUS1 |
Protein SUS1 |
4 |
0 |
no |
yes:3 |
PF10113 |
Q58197 |
1-499 |
nD2 |
416-500 |
85 |
e3wstL1 |
3WST |
2003.1.5 |
0.942 |
0.0 |
0.0 |
7.2|9.4|0 |
0.805 |
0.37 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
3 |
4 |
no |
no |
PF10113 |
O27209 |
1-504 |
nD2 |
391-505 |
115 |
e6k13A1 |
6K13 |
2003.1.1 |
0.948 |
0.829 |
0.918 |
7.1|9.5|1 |
0.749 |
0.587 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
5 |
4 |
no |
no |
PF10123 |
Q2LQS0 |
29-350 |
nD1 |
26-145 |
120 |
e6kz3A1 |
6KZ3 |
1.1.16 |
0.939 |
0.0 |
0.0 |
4.4|9.0|0 |
0.842 |
1.048 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Mammalian cell entry (MCE) domain |
2 |
7 |
no |
no |
PF10123 |
O05073 |
22-350 |
nD1 |
21-160 |
140 |
e6kz4B3 |
6KZ4 |
1.1.16 |
0.876 |
0.0 |
0.0 |
2.8|7.7|0 |
0.822 |
1.223 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Mammalian cell entry (MCE) domain |
4 |
8 |
yes:out |
no |
PF10123 |
B9JYD6 |
1-316 |
nD2 |
146-200 |
55 |
e5sy7B3 |
5SY7 |
105.1.1 |
0.913 |
0.0 |
0.0 |
4.5|4.5|1 |
0.661 |
0.821 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
3 |
0 |
no |
no |
PF10124 |
B9JYD4 |
8-297 |
nD2 |
16-50,71-80,96-185,206-298 |
228 |
e3bjqE1 |
3BJQ |
2485.3.1 |
0.879 |
0.928 |
0.977 |
7.0|10.4|0 |
0.497 |
0.765 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Major capsid protein gp5 |
Major capsid protein gp5 |
9 |
12 |
no |
no |
PF10124 |
I1YGG2 |
8-297 |
nD2 |
11-55,76-85,101-185,206-300 |
235 |
e6tbaGE1 |
6TBA |
2485.3.1 |
0.89 |
0.893 |
0.972 |
9.3|11.0|0 |
0.46 |
0.789 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Major capsid protein gp5 |
Major capsid protein gp5 |
9 |
13 |
no |
no |
PF10124 |
A0A445MWN0 |
9-292 |
nD1 |
11-50,71-293 |
263 |
e3bjqE1 |
3BJQ |
2485.3.1 |
0.867 |
0.919 |
0.973 |
7.5|11.0|0 |
0.619 |
0.883 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Major capsid protein gp5 |
Major capsid protein gp5 |
10 |
13 |
no |
no |
PF10125 |
A2SQY5 |
1-213 |
nD1 |
6-213 |
208 |
e6i0dS1 |
6I0D |
3843.1.1 |
0.853 |
0.657 |
0.664 |
7.0|20.5|0 |
0.959 |
2.08 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
6 |
4 |
no |
yes:6 |
PF10128 |
A0A418Q854 |
53-159 |
nD1 |
6-315 |
310 |
e5u5nA1 |
5U5N |
2003.1.1 |
0.882 |
0.0 |
0.0 |
5.7|8.1|1 |
0.848 |
1.582 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
10 |
14 |
no |
no |
PF10128 |
O06813 |
52-163 |
nD1 |
6-185,201-303 |
283 |
e4da9C2 |
4DA9 |
2003.1.1 |
0.853 |
0.0 |
0.0 |
8.2|8.2|1 |
0.725 |
1.444 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
11 |
13 |
no |
no |
PF10128 |
K0F317 |
52-160 |
nD1 |
31-300 |
270 |
e4ywjA1 |
4YWJ |
2003.1.1 |
0.9 |
0.0 |
0.0 |
5.6|7.0|1 |
0.854 |
1.378 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
9 |
14 |
no |
no |
PF10131 |
Q0AV07 |
2-631 |
nD2 |
341-460 |
120 |
e3vu0B1 |
3VU0 |
3110.1.1 |
0.892 |
0.529 |
0.425 |
5.7|6.5|0 |
0.695 |
0.645 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
5 |
4 |
no |
yes:out |
PF10136 |
Q63QZ3 |
36-691 |
nD2 |
106-115,181-315 |
145 |
e1x91A1 |
1X91 |
633.4.1 |
0.877 |
0.0 |
0.0 |
9.1|9.1|1 |
0.734 |
0.973 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Plant invertase/pectin methylesterase inhibitor |
Plant invertase/pectin methylesterase inhibitor |
5 |
1 |
no |
yes:out |
PF10139 |
D5ANP8 |
20-881 |
nD3 |
1-60,566-600,866-890 |
120 |
e5armA1 |
5ARM |
633.21.1 |
0.929 |
0.0 |
0.0 |
11.0|11.0|1 |
0.871 |
1.111 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
0 |
no |
no |
PF10139 |
Q607B7 |
25-880 |
nD4 |
626-665,706-860 |
195 |
e6dluP3 |
6DLU |
6108.1.1 |
0.865 |
0.0 |
0.0 |
8.4|8.4|1 |
0.468 |
0.709 |
pymol |
more |
good_domain |
alpha bundles |
Middle and GTPase effector domains in dynamin-related proteins |
Middle and GTPase effector domains in dynamin-related proteins |
Middle and GTPase effector domains in dynamin-related proteins |
7 |
0 |
no |
no |
PF10139 |
V6EYX9 |
22-879 |
nD1 |
6-60,156-245,586-610,866-885 |
190 |
e5armA1 |
5ARM |
633.21.1 |
0.915 |
0.0 |
0.0 |
9.4|9.4|1 |
0.768 |
1.759 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
8 |
1 |
no |
no |
PF10141 |
Q1WT52 |
577-769 |
nD4 |
571-670,741-770 |
130 |
e5f55A4 |
5F55 |
7511.1.1 |
0.947 |
1.0 |
0.0 |
6.3|6.7|0 |
0.742 |
0.875 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Single-stranded-DNA-specific exonuclease RecJ C-terminal domain |
Single-stranded-DNA-specific exonuclease RecJ C-terminal domain |
Single-stranded-DNA-specific exonuclease RecJ C-terminal domain |
4 |
5 |
no |
no |
PF10145 |
A8I7U7 |
185-386 |
nD3 |
151-270,416-425 |
130 |
e5cwcA1 |
5CWC |
159.1.2 |
0.921 |
0.0 |
0.0 |
6.3|6.3|1 |
0.551 |
1.413 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
7 |
0 |
no |
no |
PF10145 |
A0A2X1LCS4 |
5-201 |
nD1 |
6-240 |
235 |
e5cwcA1 |
5CWC |
159.1.2 |
0.912 |
0.0 |
0.0 |
6.1|6.1|1 |
0.74 |
2.554 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
13 |
0 |
no |
no |
PF10148 |
A0A151NB82 |
12-241 |
nD1 |
116-240 |
125 |
e5t1yB1 |
5T1Y |
4268.2.1 |
0.944 |
0.0 |
0.0 |
6.1|6.1|1 |
0.92 |
1.111 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
EspA/CesA-like |
EspA chaperone CesA |
EspA chaperone CesA |
3 |
0 |
no |
no |
PF10151 |
W5NHM0 |
10-683 |
nD2 |
581-689 |
109 |
e1i84S3 |
1I84 |
3860.1.1 |
0.92 |
0.0 |
0.0 |
5.7|6.0|0 |
0.612 |
1.493 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
3 |
0 |
no |
yes:out |
PF10154 |
Q5RD58 |
41-546 |
nD2 |
86-110,126-240 |
140 |
e2p22C1 |
2P22 |
192.15.1 |
0.859 |
0.0 |
0.0 |
6.1|7.4|0 |
0.772 |
1.302 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
4 |
2 |
no |
no |
PF10166 |
A7RXB5 |
7-138 |
nD2 |
41-125 |
85 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.923 |
0.0 |
0.0 |
6.5|6.5|1 |
0.886 |
1.156 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
yes:2 |
PF10177 |
I3KD31 |
14-197 |
nD1 |
46-75,151-210 |
90 |
e5wbxB1 |
5WBX |
5055.1.1 |
0.895 |
0.0 |
0.0 |
6.5|8.0|0 |
0.868 |
1.125 |
pymol |
more |
good_domain |
extended segments |
Small-conductance potassium channel |
Small-conductance potassium channel |
Small-conductance potassium channel |
3 |
0 |
no |
yes:2 |
PF10180 |
A0A0G4IIL3 |
60-122 |
nD2 |
46-150 |
105 |
e6tblB1 |
6TBL |
109.4.1 |
0.898 |
0.0 |
0.146 |
5.1|6.1|1 |
0.72 |
0.367 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
1 |
no |
no |
PF10181 |
A0A0W4ZBI7 |
9-72 |
nD1 |
1-93 |
93 |
e3ulbA1 |
3ULB |
220.1.1 |
0.935 |
0.0 |
0.193 |
7.2|8.5|1 |
0.913 |
0.762 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
5 |
no |
no |
PF10217 |
D2UXH9 |
11-97 |
nD1 |
22-55 |
34 |
e4g9iA6 |
4G9I |
6105.1.1 |
0.922 |
0.341 |
0.0 |
0.0|0.0|1 |
0.59 |
0.764 |
pymol |
more |
good_domain |
few secondary structure elements |
Zinc finger domain in hydrogenase maturation protein HypF |
Zinc finger domain in hydrogenase maturation protein HypF |
Zinc finger domain in hydrogenase maturation protein HypF |
2 |
1 |
no |
no |
PF10222 |
Q2KHV9 |
6-629 |
nD1 |
66-155,186-375,426-435 |
290 |
e7kmqA2 |
7KMQ |
12.3.1 |
0.94 |
0.988 |
0.978 |
12.7|15.5|1 |
0.841 |
1.032 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
6 |
17 |
yes:out |
yes:out |
PF10233 |
Q0CNZ5 |
19-131 |
nD1 |
1-130 |
130 |
e5armA1 |
5ARM |
633.21.1 |
0.867 |
0.0 |
0.0 |
10.4|10.4|1 |
0.913 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
0 |
no |
yes:4 |
PF10233 |
A0A1C1C974 |
19-130 |
nD1 |
11-130 |
120 |
e6qvhA1 |
6QVH |
633.21.1 |
0.885 |
0.0 |
0.0 |
9.5|10.2|1 |
0.891 |
1.111 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
4 |
0 |
no |
yes:4 |
PF10238 |
K1RBJ6 |
142-285 |
nD1 |
178-220,256-285 |
73 |
e1xa8B1 |
1XA8 |
708.1.2 |
0.924 |
0.0 |
0.752 |
3.6|10.0|1 |
0.696 |
0.529 |
pymol |
more |
good_domain |
beta complex topology |
ETN0001 domain-like |
ETN0001 domain-like |
Mss4-like |
0 |
8 |
no |
no |
PF10238 |
F7ERM6 |
139-282 |
nD1 |
141-220,252-284 |
113 |
e5j6pB1 |
5J6P |
708.1.2 |
0.882 |
0.0 |
0.791 |
10.4|10.4|1 |
0.816 |
0.819 |
pymol |
more |
good_domain |
beta complex topology |
ETN0001 domain-like |
ETN0001 domain-like |
Mss4-like |
1 |
8 |
no |
no |
PF10266 |
A9VDA5 |
23-1099 |
nD2 |
6-315,321-430,541-645,666-1155 |
1015 |
e1h6kC2 |
1H6K |
109.4.1 |
0.923 |
0.0 |
0.0 |
6.2|20.9|0 |
0.747 |
3.549 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
33 |
8 |
no |
yes:1 |
PF10268 |
E0VKA5 |
2-488 |
nD3 |
26-35,101-125,141-345,366-405,451-485 |
315 |
e6a2jA1 |
6A2J |
5069.1.1 |
0.878 |
0.0 |
0.0 |
6.3|6.5|0 |
0.684 |
1.486 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
11 |
1 |
yes:out |
yes:7 |
PF10269 |
Q9U2T2 |
33-270 |
nD1 |
11-315 |
305 |
e7f55R1 |
7F55 |
5001.1.1 |
0.881 |
0.426 |
0.0 |
5.5|6.7|0 |
0.647 |
1.068 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
9 |
0 |
no |
yes:8 |
PF10271 |
Q7ZW11 |
48-480 |
nD1 |
76-215,241-355,411-485 |
330 |
e6wvdA2 |
6WVD |
174.1.1 |
0.887 |
0.0 |
0.0 |
5.5|9.0|0 |
0.788 |
2.26 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
11 |
1 |
no |
yes:8 |
PF10271 |
W5MTR6 |
42-470 |
nD1 |
71-195,241-345,401-465 |
295 |
e4tq4D1 |
4TQ4 |
141.1.1 |
0.901 |
0.0 |
0.0 |
8.5|9.5|1 |
0.648 |
0.942 |
pymol |
more |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
10 |
1 |
no |
yes:8 |
PF10272 |
A7RGW0 |
19-360 |
nD1 |
6-130 |
125 |
e7jz2H1 |
7JZ2 |
5069.1.3 |
0.896 |
0.0 |
0.0 |
5.1|6.4|0 |
0.844 |
0.969 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
5 |
0 |
no |
yes:3 |
PF10272 |
R4FMN6 |
26-367 |
nD2 |
136-260 |
125 |
e3fssA2 |
3FSS |
220.1.1 |
0.938 |
0.0 |
0.0 |
5.3|5.5|1 |
0.954 |
1.025 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
7 |
no |
yes:out |
PF10277 |
A0A3A5VJ35 |
22-224 |
nD1 |
11-225 |
215 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.925 |
0.0 |
0.0 |
8.1|8.1|1 |
0.773 |
3.644 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
6 |
0 |
no |
yes:6 |
PF10287 |
G0VAP6 |
104-338 |
nD1 |
26-170,196-340 |
290 |
e1ajoA1 |
1AJO |
10.1.1 |
0.88 |
0.957 |
0.979 |
5.8|7.7|1 |
0.733 |
1.355 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
3 |
19 |
yes:out |
no |
PF10287 |
A0A433QXK1 |
98-318 |
nD1 |
21-328 |
308 |
e1ajoA1 |
1AJO |
10.1.1 |
0.858 |
0.966 |
0.983 |
6.0|7.8|1 |
0.753 |
1.439 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
2 |
19 |
yes:out |
no |
PF10290 |
G0VAP6 |
26-93 |
nD1 |
26-170,196-340 |
290 |
e1ajoA1 |
1AJO |
10.1.1 |
0.88 |
0.957 |
0.979 |
5.8|7.7|1 |
0.733 |
1.355 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
3 |
19 |
yes:out |
no |
PF10290 |
A0A433QXK1 |
25-94 |
nD1 |
21-328 |
308 |
e1ajoA1 |
1AJO |
10.1.1 |
0.858 |
0.966 |
0.983 |
6.0|7.8|1 |
0.753 |
1.439 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
2 |
19 |
yes:out |
no |
PF10303 |
A0A2V1CFF5 |
172-292 |
nD2 |
176-260 |
85 |
e1vcsA1 |
1VCS |
603.1.1 |
0.863 |
0.0 |
0.0 |
8.0|8.0|1 |
0.877 |
0.81 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
no |
PF10310 |
Q755M4 |
14-421 |
nD1 |
196-240,266-420 |
200 |
e3wb2A1 |
3WB2 |
7504.1.1 |
0.907 |
0.0 |
0.0 |
6.9|10.8|1 |
0.822 |
1.058 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
ITPase-like |
ITPase-like |
ITPase-like |
4 |
6 |
no |
no |
PF10310 |
E3QRV9 |
17-489 |
nD1 |
221-270,296-360,386-490 |
220 |
e3wb2A1 |
3WB2 |
7504.1.1 |
0.939 |
0.0 |
0.0 |
7.3|11.5|1 |
0.872 |
1.164 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
ITPase-like |
ITPase-like |
ITPase-like |
6 |
6 |
no |
no |
PF10310 |
G7X924 |
14-485 |
nD1 |
211-255,296-355,386-419,456-485 |
169 |
e1u14A1 |
1U14 |
7504.1.1 |
0.902 |
0.0 |
0.0 |
12.2|12.2|1 |
0.804 |
0.894 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
ITPase-like |
ITPase-like |
ITPase-like |
5 |
7 |
no |
no |
PF10313 |
A0A5B7B3W3 |
115-151 |
nD1 |
1-199 |
199 |
e7ktsB1 |
7KTS |
5.1.5 |
0.922 |
0.999 |
0.999 |
19.8|23.0|0 |
0.705 |
0.512 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
8-bladed |
1 |
17 |
no |
no |
PF10313 |
F2DH39 |
168-204 |
nD1 |
1-245 |
245 |
e4yczA1 |
4YCZ |
5.1.4 |
0.929 |
1.0 |
1.0 |
25.0|27.4|1 |
0.927 |
0.682 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
22 |
no |
no |
PF10315 |
A0A1X0QY47 |
13-113 |
nD1 |
1-120 |
120 |
e6zifA1 |
6ZIF |
633.21.1 |
0.869 |
0.0 |
0.0 |
10.8|10.8|1 |
0.938 |
1.111 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
0 |
no |
no |
PF10315 |
A0A2G4T878 |
12-114 |
nD1 |
6-120 |
115 |
e6zifA1 |
6ZIF |
633.21.1 |
0.873 |
0.0 |
0.0 |
10.7|10.7|1 |
0.938 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
0 |
no |
no |
PF10329 |
G2X303 |
40-267 |
nD1 |
66-245 |
180 |
e6wvdA2 |
6WVD |
174.1.1 |
0.861 |
0.0 |
0.0 |
6.9|7.6|0 |
0.834 |
1.233 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:5 |
PF10337 |
Q5AD04 |
122-597 |
nD1 |
181-330,711-750 |
190 |
e3lf9A1 |
3LF9 |
310.2.1 |
0.943 |
0.0 |
0.0 |
7.4|7.4|1 |
0.755 |
1.033 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
8 |
0 |
yes:out |
yes:6 |
PF10344 |
Q06179 |
23-921 |
nD1 |
136-215,261-378,401-415 |
213 |
e6cbcB1 |
6CBC |
7026.1.1 |
0.943 |
0.315 |
0.0 |
7.6|7.6|1 |
0.608 |
0.758 |
pymol |
more |
good_domain |
beta meanders |
N-terminal region of lipid transporter Vps13 |
N-terminal region of lipid transporter Vps13 |
N-terminal region of lipid transporter Vps13 |
4 |
10 |
yes:out |
no |
PF10351 |
A7EDI6 |
14-571 |
nD1 |
86-180 |
95 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.934 |
0.0 |
0.0 |
8.0|8.0|0 |
0.974 |
1.293 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
no |
PF10355 |
A3LQA2 |
262-557 |
nD3 |
281-320,336-405,426-545 |
230 |
e4o7gB1 |
4O7G |
5069.1.1 |
0.871 |
0.503 |
0.189 |
4.2|6.6|0 |
0.705 |
1.085 |
pymol |
na |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
8 |
0 |
no |
yes:5 |
PF10355 |
Q6CTZ5 |
344-635 |
nD3 |
366-625 |
260 |
e6hcyB1 |
6HCY |
129.1.1 |
0.897 |
0.0 |
0.0 |
6.9|6.9|1 |
0.341 |
2.031 |
pymol |
more |
good_domain |
alpha arrays |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
10 |
2 |
yes:out |
yes:5 |
PF10365 |
C9LIZ3 |
26-185 |
nD2 |
46-195 |
150 |
e5a9dB1 |
5A9D |
11.1.4 |
0.897 |
0.0 |
0.0 |
7.3|8.1|1 |
0.918 |
1.2 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
9 |
yes:out |
no |
PF10375 |
A0A1X2GDU2 |
204-252 |
nD2 |
206-255 |
50 |
e1uptB1 |
1UPT |
548.1.1 |
0.852 |
0.98 |
0.975 |
0.0|4.3|0 |
0.759 |
0.862 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
GRIP domain |
GRIP domain |
GRIP domain |
3 |
0 |
no |
no |
PF10375 |
A0A7R9WPU9 |
177-223 |
nD3 |
181-225 |
45 |
e1uptB1 |
1UPT |
548.1.1 |
0.899 |
0.967 |
0.964 |
0.0|4.3|0 |
0.722 |
0.776 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
GRIP domain |
GRIP domain |
GRIP domain |
3 |
0 |
no |
no |
PF10379 |
Q7BCU1 |
38-221 |
nD1 |
111-220 |
110 |
e3bgaA10 |
3BGA |
11.1.1 |
0.942 |
0.0 |
0.0 |
6.8|6.8|1 |
0.794 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
no |
no |
PF10379 |
Q7BCU9 |
38-221 |
nD1 |
116-220 |
105 |
e6rw8A7 |
6RW8 |
11.1.1 |
0.864 |
0.0 |
0.0 |
6.7|6.9|0 |
0.776 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
no |
no |
PF10379 |
Q7BCU6 |
38-221 |
nD1 |
111-220 |
110 |
e3o0lA1 |
3O0L |
11.1.1 |
0.936 |
0.0 |
0.0 |
6.0|6.8|0 |
0.934 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
no |
no |
PF10382 |
C6HSR2 |
16-96 |
nD1 |
11-95 |
85 |
e2z14A1 |
2Z14 |
220.1.1 |
0.867 |
0.0 |
0.0 |
5.6|7.4|1 |
0.603 |
0.697 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
6 |
no |
no |
PF10382 |
A5DAH4 |
9-96 |
nD1 |
6-95 |
90 |
e2z14A1 |
2Z14 |
220.1.1 |
0.853 |
0.0 |
0.0 |
5.7|7.1|1 |
0.603 |
0.738 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
4 |
5 |
no |
no |
PF10382 |
A0A0G2FYI7 |
11-92 |
nD1 |
6-90 |
85 |
e2z14A1 |
2Z14 |
220.1.1 |
0.868 |
0.0 |
0.0 |
5.6|5.8|1 |
0.628 |
0.697 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
6 |
no |
no |
PF10428 |
F2SYE4 |
425-863 |
nD3 |
706-870,951-970 |
185 |
e6qvhA1 |
6QVH |
633.21.1 |
0.909 |
0.0 |
0.0 |
11.5|14.4|0 |
0.984 |
1.713 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
1 |
no |
no |
PF10428 |
Q08817 |
299-781 |
nD2 |
291-445 |
155 |
e1y8oA1 |
1Y8O |
633.15.1 |
0.918 |
0.0 |
0.0 |
10.5|10.5|1 |
0.864 |
0.945 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
alpha-ketoacid dehydrogenase kinase-N |
alpha-ketoacid dehydrogenase kinase-N |
5 |
0 |
no |
no |
PF10428 |
Q08817 |
299-781 |
nD3 |
621-790 |
170 |
e1r0dI1 |
1R0D |
601.1.2 |
0.914 |
0.0 |
0.0 |
9.8|11.1|0 |
0.886 |
1.03 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
no |
PF10443 |
Q751P7 |
345-768 |
nD3 |
326-345,561-645 |
105 |
e4kxfH9 |
4KXF |
148.1.3 |
0.949 |
0.968 |
0.975 |
4.3|12.4|0 |
0.655 |
1.129 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
0 |
no |
yes:out |
PF10454 |
A0A3M6WN84 |
3-175 |
nD1 |
6-175 |
170 |
e6r2gA1 |
6R2G |
3567.1.1 |
0.895 |
0.0 |
0.0 |
8.3|8.5|0 |
0.965 |
2.881 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
4 |
1 |
no |
no |
PF10457 |
E0VM68 |
69-258 |
nD1 |
41-210 |
170 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.896 |
0.0 |
0.0 |
9.0|9.0|1 |
0.682 |
1.049 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
6 |
0 |
no |
yes:4 |
PF10457 |
W5JAE9 |
77-254 |
nD1 |
51-220 |
170 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.918 |
0.0 |
0.0 |
9.8|9.8|1 |
0.702 |
1.049 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
6 |
0 |
no |
yes:4 |
PF10475 |
T1JPQ1 |
24-308 |
nD3 |
116-315,396-470,551-560 |
285 |
e3lpzA1 |
3LPZ |
109.4.1 |
0.947 |
0.0 |
0.959 |
7.5|11.2|1 |
0.573 |
0.997 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
yes:out |
PF10476 |
G3NWJ6 |
188-391 |
nD4 |
206-230,291-375 |
110 |
e6egcA1 |
6EGC |
192.29.1 |
0.944 |
0.0 |
0.0 |
13.4|13.4|1 |
0.754 |
1.447 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF10476 |
A0A5N4DDK8 |
153-351 |
nD3 |
171-200,246-345 |
130 |
e6egcA1 |
6EGC |
192.29.1 |
0.932 |
0.0 |
0.0 |
12.5|12.5|1 |
0.818 |
1.711 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF10494 |
G8BJP6 |
117-376 |
nD1 |
66-220,291-380 |
245 |
e6wjhA1 |
6WJH |
101.1.2 |
0.946 |
0.0 |
0.674 |
4.5|6.3|1 |
0.581 |
2.579 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
9 |
9 |
no |
no |
PF10496 |
A0A674PJN1 |
4-91 |
nD1 |
31-155,176-210 |
160 |
e2dnxA1 |
2DNX |
603.1.1 |
0.895 |
0.973 |
0.998 |
11.3|11.8|0 |
0.948 |
1.524 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
yes:out |
PF10496 |
A0A674DXC0 |
3-91 |
nD1 |
31-165 |
135 |
e2dnxA1 |
2DNX |
603.1.1 |
0.947 |
0.975 |
0.998 |
11.4|12.3|0 |
0.983 |
1.286 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
yes:out |
PF10506 |
M3ZJI2 |
324-388 |
nD4 |
201-250,341-390,446-470 |
125 |
e5iujE2 |
5IUJ |
605.1.1 |
0.941 |
0.0 |
0.0 |
6.3|6.4|0 |
0.895 |
1.712 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
4 |
0 |
no |
no |
PF10534 |
W5KL11 |
84-176 |
nD2 |
86-200 |
115 |
e6egcA1 |
6EGC |
192.29.1 |
0.875 |
0.0 |
0.0 |
10.5|10.5|0 |
0.734 |
1.513 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF10537 |
A5DR64 |
24-124 |
nD1 |
1-80 |
80 |
e5undB2 |
5UND |
386.1.1 |
0.865 |
0.0 |
0.0 |
3.5|3.5|1 |
0.96 |
2.424 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
3 |
no |
no |
PF10537 |
C5GAC3 |
23-123 |
nD1 |
1-80 |
80 |
e5undB2 |
5UND |
386.1.1 |
0.921 |
0.0 |
0.0 |
4.4|4.4|1 |
0.942 |
2.424 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
5 |
no |
no |
PF10546 |
B8DS55 |
163-257 |
nD2 |
161-285 |
125 |
e6jniD1 |
6JNI |
101.1.9 |
0.89 |
0.0 |
0.0 |
3.1|3.1|1 |
0.542 |
1.429 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
6 |
1 |
no |
no |
PF10548 |
A0A1B3JHV7 |
132-204 |
nD2 |
136-230 |
95 |
e4dndA1 |
4DND |
603.1.1 |
0.85 |
0.0 |
0.0 |
6.5|6.5|1 |
0.852 |
0.905 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
no |
PF10552 |
Q833C7 |
113-226 |
nD2 |
141-230 |
90 |
e4d7xA1 |
4D7X |
103.4.1 |
0.932 |
0.0 |
0.0 |
5.0|5.0|1 |
0.814 |
0.928 |
pymol |
na |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
1 |
no |
no |
PF10563 |
A0A2G2JQJ7 |
57-234 |
nD1 |
11-95,126-265 |
225 |
e3fe4A1 |
3FE4 |
62.1.1 |
0.908 |
0.81 |
0.896 |
7.9|8.7|1 |
0.632 |
0.877 |
pymol |
more |
good_domain |
beta meanders |
Carbonic anhydrase |
Carbonic anhydrase |
Carbonic anhydrase |
3 |
10 |
no |
no |
PF10563 |
A0A1Y5FG72 |
64-241 |
nD1 |
21-103,132-274 |
226 |
e5hpjA1 |
5HPJ |
62.1.1 |
0.935 |
0.92 |
0.91 |
8.5|8.5|1 |
0.672 |
0.881 |
pymol |
more |
good_domain |
beta meanders |
Carbonic anhydrase |
Carbonic anhydrase |
Carbonic anhydrase |
3 |
9 |
no |
no |
PF10571 |
P44114 |
6-28 |
nD1 |
1-35 |
35 |
e7oqyY2 |
7OQY |
375.1.1 |
0.932 |
0.975 |
0.987 |
0.0|4.7|0 |
0.705 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
yes:out |
PF10571 |
A0A5C6H569 |
6-28 |
nD1 |
1-70 |
70 |
e3haxC1 |
3HAX |
375.4.1 |
0.946 |
0.985 |
0.987 |
0.0|4.6|0 |
0.733 |
1.167 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Nucleolar RNA-binding protein Nop10-like |
Nucleolar RNA-binding protein Nop10-like |
1 |
2 |
no |
yes:1 |
PF10571 |
A4MVM1 |
6-28 |
nD1 |
1-70 |
70 |
e3haxC1 |
3HAX |
375.4.1 |
0.946 |
0.982 |
0.986 |
0.0|4.5|0 |
0.591 |
1.167 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Nucleolar RNA-binding protein Nop10-like |
Nucleolar RNA-binding protein Nop10-like |
1 |
2 |
no |
yes:1 |
PF10577 |
E7F078 |
35-289 |
nD2 |
121-290 |
170 |
e4dloB6 |
4DLO |
12.5.1 |
0.939 |
0.0 |
0.751 |
7.8|9.2|1 |
0.893 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
1 |
12 |
yes:out |
yes:out |
PF10577 |
A2A699 |
41-295 |
nD2 |
126-295 |
170 |
e3g5bA1 |
3G5B |
12.5.1 |
0.944 |
0.0 |
0.552 |
9.4|9.4|1 |
0.882 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
2 |
11 |
yes:out |
yes:1 |
PF10577 |
F7BD03 |
36-289 |
nD2 |
121-290 |
170 |
e4dloB6 |
4DLO |
12.5.1 |
0.926 |
0.0 |
0.595 |
6.2|7.5|1 |
0.894 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
1 |
11 |
yes:out |
yes:out |
PF10578 |
A0A6P5P4R1 |
223-234 |
nD1 |
96-280 |
185 |
e5vmkA2 |
5VMK |
208.1.1 |
0.867 |
0.0 |
0.0 |
10.0|10.0|1 |
0.798 |
1.039 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded left-handed beta-helix |
Trimeric LpxA-like enzymes |
Trimeric LpxA-like enzymes |
0 |
17 |
yes:out |
no |
PF10616 |
Q144R0 |
22-146 |
nD1 |
31-140 |
110 |
e5ugwA1 |
5UGW |
4967.1.1 |
0.93 |
0.0 |
0.0 |
4.4|4.4|1 |
0.659 |
0.827 |
pymol |
more |
good_domain |
alpha bundles |
helical bundle domain in reverse transcriptase-like polymerases |
helical bundle domain in reverse transcriptase-like polymerases |
helical bundle domain in reverse transcriptase-like polymerases |
4 |
1 |
no |
no |
PF10616 |
A0A239SCA9 |
9-125 |
nD1 |
6-80,111-135 |
100 |
e1z8uA1 |
1Z8U |
604.4.1 |
0.883 |
0.0 |
0.0 |
4.8|5.6|0 |
0.928 |
1.031 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Alpha-hemoglobin stabilizing protein AHSP |
Alpha-hemoglobin stabilizing protein AHSP |
4 |
1 |
no |
no |
PF10620 |
Q89XP2 |
96-217 |
nD1 |
11-215 |
205 |
e1wotA1 |
1WOT |
316.1.1 |
0.906 |
0.966 |
0.964 |
6.4|6.5|1 |
0.871 |
1.185 |
pymol |
more |
good_domain |
a+b three layers |
Nucleotidyltransferase-like |
Nucleotidyltransferase |
Nucleotidyltransferase |
7 |
11 |
no |
no |
PF10622 |
A0A842MB48 |
5-80 |
nD1 |
6-80 |
75 |
e6gmhM9 |
6GMH |
214.1.1 |
0.879 |
0.0 |
0.0 |
3.1|3.1|1 |
0.5 |
0.676 |
pymol |
more |
good_domain |
a+b two layers |
SH2 |
SH2 |
SH2 |
3 |
4 |
no |
no |
PF10623 |
A0A611XTS0 |
1-83 |
nD1 |
6-80 |
75 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.89 |
0.0 |
0.0 |
6.3|6.3|1 |
0.947 |
1.24 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
1 |
5 |
no |
no |
PF10623 |
A0A6Y0S7G5 |
1-83 |
nD1 |
6-70 |
65 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.888 |
0.0 |
0.0 |
6.3|6.3|1 |
0.947 |
1.074 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
1 |
5 |
no |
no |
PF10625 |
Q9KVR0 |
1-107 |
nD1 |
6-105 |
100 |
e5ng5E4 |
5NG5 |
5086.1.1 |
0.854 |
0.0 |
0.0 |
7.2|7.4|0 |
0.891 |
1.183 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
0 |
no |
yes:2 |
PF10628 |
A0A4Y8INH3 |
5-174 |
nD1 |
21-45,61-85,111-135 |
75 |
e2xcmC1 |
2XCM |
319.1.1 |
0.872 |
0.0 |
0.0 |
3.0|3.6|1 |
0.779 |
0.688 |
pymol |
more |
good_domain |
beta sandwiches |
HSP20-like |
HSP20-like chaperones |
HSP20-like chaperones |
0 |
6 |
no |
no |
PF10654 |
A0A6Z2PHM0 |
3-127 |
nD1 |
6-55,116-125 |
60 |
e7mq1B1 |
7MQ1 |
3826.1.1 |
0.924 |
0.0 |
0.0 |
7.4|7.4|1 |
0.707 |
0.682 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
3 |
0 |
no |
no |
PF10654 |
A0A466BVE0 |
3-127 |
nD2 |
41-125 |
85 |
e1a9xE1 |
1A9X |
101.1.2 |
0.938 |
0.403 |
0.956 |
6.8|6.8|1 |
0.783 |
0.895 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
5 |
0 |
no |
no |
PF10655 |
A0A5F0TZI8 |
3-102 |
nD1 |
1-70 |
70 |
e1hbxD1 |
1HBX |
263.1.1 |
0.909 |
0.0 |
0.0 |
4.0|4.0|1 |
0.736 |
0.828 |
pymol |
more |
good_domain |
a+b three layers |
SRF-like |
SRF-like |
SRF-like |
1 |
2 |
no |
no |
PF10675 |
A0A2E2XHB5 |
17-148 |
nD2 |
46-154 |
109 |
e6qv7A1 |
6QV7 |
601.33.1 |
0.88 |
0.0 |
0.0 |
6.3|6.3|1 |
0.708 |
0.801 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
4 |
0 |
no |
yes:out |
PF10675 |
A0A1H1X7T1 |
15-141 |
nD2 |
31-145 |
115 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.855 |
0.0 |
0.0 |
6.0|7.1|0 |
0.425 |
1.575 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
5 |
0 |
no |
yes:out |
PF10677 |
A0A4Q9V4T2 |
2-190 |
nD1 |
1-198 |
198 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.91 |
0.996 |
0.998 |
15.1|15.1|1 |
0.772 |
0.538 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
11 |
no |
no |
PF10677 |
T2KQT9 |
2-196 |
nD1 |
1-204 |
204 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.902 |
0.996 |
0.997 |
14.7|14.7|1 |
0.749 |
0.554 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
11 |
no |
no |
PF10677 |
A0A245ZRT7 |
6-187 |
nD1 |
6-200 |
195 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.916 |
0.997 |
0.998 |
16.5|16.5|1 |
0.777 |
0.53 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
11 |
no |
no |
PF10688 |
A0A6G2JNF2 |
6-161 |
nD1 |
6-160 |
155 |
e6l7oG1 |
6L7O |
3579.1.1 |
0.948 |
0.541 |
0.465 |
8.1|8.3|1 |
0.482 |
0.912 |
pymol |
more |
good_domain |
extended segments |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
7 |
0 |
yes:in |
yes:5 |
PF10688 |
A0A1C7HN89 |
7-162 |
nD1 |
6-160 |
155 |
e7o7161 |
7O71 |
3579.1.1 |
0.924 |
0.584 |
0.789 |
7.9|9.8|0 |
0.461 |
0.912 |
pymol |
more |
good_domain |
extended segments |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
7 |
0 |
yes:in |
yes:5 |
PF10693 |
A0A6G7VG08 |
3-86 |
nD1 |
1-220 |
220 |
e4qi1B1 |
4QI1 |
5001.1.1 |
0.92 |
0.171 |
0.148 |
6.1|12.9|1 |
0.66 |
0.771 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
6 |
0 |
no |
yes:7 |
PF10693 |
A0A845VPZ1 |
3-91 |
nD1 |
6-95 |
90 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.869 |
0.0 |
0.109 |
8.4|8.4|1 |
0.926 |
0.9 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF10693 |
A0A1D9G3C0 |
3-91 |
nD1 |
6-95 |
90 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.869 |
0.0 |
0.109 |
8.4|8.4|1 |
0.926 |
0.9 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF10724 |
A0A7I7PEC5 |
5-87 |
nD1 |
6-85 |
80 |
e2winP1 |
2WIN |
632.15.1 |
0.937 |
0.0 |
0.0 |
8.3|8.3|1 |
0.898 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Staphylococcal complement inhibitor (SCIN) |
Staphylococcal complement inhibitor (SCIN) |
3 |
0 |
no |
yes:2 |
PF10724 |
A0A1A3TK37 |
4-87 |
nD1 |
6-85 |
80 |
e4h6hD2 |
4H6H |
632.15.1 |
0.936 |
0.0 |
0.0 |
8.4|8.4|1 |
0.922 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Staphylococcal complement inhibitor (SCIN) |
Staphylococcal complement inhibitor (SCIN) |
3 |
0 |
yes:in |
yes:1 |
PF10732 |
A0A1V4P9Z9 |
1-84 |
nD1 |
6-85 |
80 |
e1yd8H1 |
1YD8 |
604.6.1 |
0.922 |
0.0 |
0.0 |
12.2|12.2|1 |
0.899 |
0.842 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
3 |
0 |
no |
no |
PF10732 |
A0A6I2MD53 |
1-84 |
nD1 |
6-85 |
80 |
e1yd8H1 |
1YD8 |
604.6.1 |
0.923 |
0.0 |
0.0 |
11.6|11.6|1 |
0.899 |
0.842 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
3 |
0 |
no |
no |
PF10732 |
A0A1S2LUB7 |
1-84 |
nD1 |
6-85 |
80 |
e1o3xA1 |
1O3X |
604.6.1 |
0.87 |
0.0 |
0.0 |
12.0|12.0|1 |
0.838 |
0.842 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
3 |
0 |
no |
no |
PF10750 |
Q9KDD5 |
1-68 |
nD1 |
6-69 |
64 |
e4n2pC2 |
4N2P |
256.1.1 |
0.943 |
0.0 |
0.0 |
6.7|6.7|1 |
0.893 |
0.948 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF10750 |
C2ZD62 |
1-62 |
nD1 |
1-60 |
60 |
e4n2pC2 |
4N2P |
256.1.1 |
0.938 |
0.0 |
0.0 |
6.9|6.9|1 |
0.859 |
0.889 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF10750 |
A0A358GCC0 |
1-60 |
nD1 |
6-60 |
55 |
e4n2pC2 |
4N2P |
256.1.1 |
0.887 |
0.0 |
0.0 |
7.0|7.0|1 |
0.795 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
2 |
2 |
no |
no |
PF10752 |
B7GKS8 |
2-84 |
nD1 |
6-85 |
80 |
e1cxzB1 |
1CXZ |
192.5.1 |
0.862 |
0.0 |
0.0 |
7.1|7.1|1 |
0.778 |
0.874 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
HR1 repeat |
HR1 repeat |
3 |
0 |
no |
no |
PF10756 |
A0A6B2U297 |
69-135 |
nD1 |
1-145 |
145 |
e3dcxA1 |
3DCX |
220.1.1 |
0.94 |
0.662 |
0.933 |
6.8|9.5|1 |
0.908 |
1.189 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
4 |
6 |
no |
yes:2 |
PF10767 |
A0A0H3GUT1 |
21-160 |
nD1 |
21-160 |
140 |
e6wvgA2 |
6WVG |
174.1.1 |
0.903 |
0.226 |
0.0 |
7.6|7.6|1 |
0.845 |
0.959 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF10768 |
Q2RQF0 |
1-145 |
nD2 |
71-145 |
75 |
e2rkkA1 |
2RKK |
604.12.1 |
0.906 |
0.0 |
0.0 |
8.2|8.2|1 |
0.827 |
0.867 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
no |
PF10774 |
A0A2G5PDF4 |
2-118 |
nD1 |
1-120 |
120 |
e4iloB5 |
4ILO |
3755.3.1 |
0.909 |
0.0 |
0.0 |
9.5|9.5|1 |
0.599 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF10782 |
A0A2A7H0B1 |
1-58 |
nD1 |
1-58 |
58 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.859 |
0.0 |
0.0 |
4.5|4.5|1 |
0.791 |
0.789 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
4 |
0 |
no |
no |
PF10792 |
A0A4R0R4G4 |
4-97 |
nD1 |
1-95 |
95 |
e3rguA1 |
3RGU |
632.1.1 |
0.928 |
0.0 |
0.0 |
8.8|9.4|0 |
0.954 |
0.844 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Families 57/38 glycoside transferase middle domain |
Families 57/38 glycoside transferase middle domain |
3 |
0 |
no |
no |
PF10792 |
A0A7G7KGH8 |
4-97 |
nD1 |
6-95 |
90 |
e6zhiB2 |
6ZHI |
632.7.1 |
0.924 |
0.0 |
0.0 |
8.0|8.1|1 |
0.799 |
0.865 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
3 |
0 |
no |
no |
PF10796 |
W0HUS2 |
1-86 |
nD1 |
6-88 |
83 |
e1ybzA1 |
1YBZ |
164.1.1 |
0.922 |
0.0 |
0.0 |
5.5|6.7|1 |
0.914 |
0.636 |
pymol |
more |
good_domain |
alpha bundles |
Chorismate mutase II |
Chorismate mutase II |
Chorismate mutase II |
3 |
0 |
yes:in |
no |
PF10799 |
A6T6T3 |
13-138 |
nD1 |
6-139 |
134 |
e6egcA1 |
6EGC |
192.29.1 |
0.924 |
0.0 |
0.0 |
12.2|12.2|1 |
0.827 |
1.763 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
2 |
no |
no |
PF10799 |
A0A0H3GKH0 |
1-126 |
nD1 |
1-120 |
120 |
e6egcA1 |
6EGC |
192.29.1 |
0.94 |
0.0 |
0.0 |
12.1|12.1|1 |
0.792 |
1.579 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
no |
PF10800 |
J7TAP4 |
18-118 |
nD1 |
1-110 |
110 |
e1efuB2 |
1EFU |
230.3.1 |
0.88 |
0.0 |
0.0 |
5.2|5.2|1 |
0.853 |
0.991 |
pymol |
more |
good_domain |
a+b two layers |
T-fold |
Elongation factor Ts (EF-Ts), dimerisation domain |
Elongation factor Ts (EF-Ts), dimerisation domain |
5 |
3 |
no |
no |
PF10808 |
P64538 |
1-79 |
nD1 |
6-79 |
74 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.923 |
0.0 |
0.0 |
6.6|6.6|0 |
0.86 |
1.007 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
2 |
2 |
no |
yes:2 |
PF10808 |
P64536 |
1-79 |
nD1 |
1-79 |
79 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.92 |
0.0 |
0.0 |
6.7|6.7|1 |
0.919 |
1.075 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
2 |
2 |
no |
yes:2 |
PF10816 |
E3FCX0 |
73-196 |
nD2 |
126-175 |
50 |
e1dkgA1 |
1DKG |
706.1.1 |
0.861 |
0.794 |
0.0 |
0.0|0.0|0 |
0.652 |
0.87 |
pymol |
more |
good_domain |
beta complex topology |
Head domain of nucleotide exchange factor GrpE |
Head domain of nucleotide exchange factor GrpE |
Head domain of nucleotide exchange factor GrpE |
0 |
4 |
yes:out |
no |
PF10819 |
A0A090YKI6 |
5-82 |
nD1 |
1-80 |
80 |
e4hwcE2 |
4HWC |
604.3.1 |
0.877 |
0.0 |
0.0 |
10.1|10.3|0 |
0.936 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
no |
no |
PF10819 |
A0A2C9YMN9 |
5-82 |
nD1 |
6-80 |
75 |
e4hwdD1 |
4HWD |
604.3.1 |
0.891 |
0.0 |
0.0 |
9.9|10.4|0 |
0.871 |
0.852 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
no |
no |
PF10821 |
A0A3G8ZTK7 |
16-164 |
nD1 |
6-165 |
160 |
e5gkoA4 |
5GKO |
1075.1.2 |
0.883 |
0.0 |
0.0 |
6.0|7.3|1 |
0.649 |
0.838 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
MacB transmembrane domain |
4 |
3 |
no |
yes:4 |
PF10821 |
W9BKW9 |
27-192 |
nD1 |
16-45,66-195 |
160 |
e5lilA4 |
5LIL |
1075.1.2 |
0.883 |
0.0 |
0.0 |
6.5|6.5|1 |
0.785 |
0.838 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
MacB transmembrane domain |
4 |
1 |
no |
yes:4 |
PF10840 |
A0A5K1VRT8 |
4-100 |
nD1 |
1-100 |
100 |
e2c5kT1 |
2C5K |
603.1.1 |
0.902 |
0.0 |
0.0 |
8.5|8.5|1 |
0.908 |
0.952 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
yes:3 |
PF10840 |
Q666E6 |
5-101 |
nD1 |
1-100 |
100 |
e2c5kT1 |
2C5K |
603.1.1 |
0.904 |
0.0 |
0.0 |
8.5|8.5|1 |
0.909 |
0.952 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
yes:3 |
PF10841 |
A0A0J5S3U8 |
6-64 |
nD1 |
16-74 |
59 |
e5lpnB2 |
5LPN |
192.29.1 |
0.926 |
0.0 |
0.0 |
6.2|6.2|1 |
1.0 |
0.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
2 |
1 |
no |
yes:2 |
PF10846 |
A7TLY3 |
3-309 |
nD1 |
16-85 |
70 |
e3nr7A1 |
3NR7 |
559.1.1 |
0.879 |
0.56 |
0.422 |
3.6|5.2|0 |
0.346 |
1.085 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
H-NS histone-like proteins, N-terminal domain |
H-NS histone-like proteins, N-terminal domain |
H-NS histone-like proteins, N-terminal domain |
3 |
0 |
no |
no |
PF10852 |
R7FLG0 |
5-76 |
nD1 |
1-80 |
80 |
e5lb7B1 |
5LB7 |
604.12.1 |
0.915 |
0.0 |
0.0 |
6.5|6.5|1 |
0.922 |
0.925 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF10861 |
V9XCK6 |
4-113 |
nD1 |
1-55,91-115 |
80 |
e3mq1B1 |
3MQ1 |
622.4.1 |
0.855 |
0.0 |
0.0 |
6.2|6.2|1 |
0.733 |
0.751 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
Mite allergen Der p 5-related |
Mite allergen Der p 5-related |
3 |
1 |
no |
yes:3 |
PF10875 |
Q9ZDQ6 |
1-141 |
nD1 |
16-45,56-95 |
70 |
e2lqlA2 |
2LQL |
568.1.1 |
0.869 |
0.309 |
0.21 |
0.0|4.1|0 |
0.545 |
1.029 |
pymol |
more |
good_domain |
few secondary structure elements |
p8-MTCP1-related |
p8-MTCP1-related |
p8-MTCP1-related |
3 |
0 |
no |
yes:1 |
PF10875 |
C4YUZ9 |
1-139 |
nD1 |
16-45,61-90 |
60 |
e2lqlA2 |
2LQL |
568.1.1 |
0.937 |
0.424 |
0.279 |
0.0|4.0|0 |
0.478 |
0.882 |
pymol |
more |
good_domain |
few secondary structure elements |
p8-MTCP1-related |
p8-MTCP1-related |
p8-MTCP1-related |
3 |
0 |
no |
yes:1 |
PF10882 |
A9WIF8 |
77-175 |
nD2 |
1-10,76-110,136-180 |
90 |
e4tyzA1 |
4TYZ |
220.1.1 |
0.898 |
0.357 |
0.52 |
7.5|7.9|1 |
0.784 |
0.738 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
7 |
no |
yes:out |
PF10887 |
P39308 |
5-264 |
nD1 |
41-60,106-264 |
179 |
e1kzfA1 |
1KZF |
213.1.1 |
0.902 |
0.0 |
0.231 |
8.0|8.9|1 |
0.886 |
1.088 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
3 |
8 |
no |
no |
PF10902 |
R5CCG7 |
35-106 |
nD1 |
11-109 |
99 |
e2e12A1 |
2E12 |
4.1.1 |
0.911 |
0.0 |
0.48 |
4.8|4.8|1 |
0.81 |
1.238 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
5 |
4 |
no |
no |
PF10905 |
M2QBI5 |
12-64 |
nD1 |
1-70 |
70 |
e5mqqA1 |
5MQQ |
101.1.1 |
0.947 |
0.0 |
0.833 |
3.9|5.2|0 |
0.904 |
0.959 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF10908 |
H2J262 |
28-151 |
nD1 |
1-165 |
165 |
e7o21A1 |
7O21 |
4091.1.1 |
0.937 |
0.918 |
0.899 |
8.0|9.9|1 |
0.833 |
1.126 |
pymol |
more |
good_domain |
beta complex topology |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
2 |
11 |
no |
yes:1 |
PF10911 |
A0A7X9XDT0 |
1-73 |
nD1 |
6-75 |
70 |
e4kisA2 |
4KIS |
375.1.9 |
0.918 |
0.0 |
0.0 |
4.9|5.6|0 |
0.67 |
0.354 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Zinc-nucleated domain of serine integrase |
3 |
0 |
no |
no |
PF10911 |
A0A0J8IKB9 |
1-74 |
nD1 |
1-75 |
75 |
e4l8jA1 |
4L8J |
5086.1.1 |
0.906 |
0.0 |
0.0 |
5.0|5.0|1 |
0.923 |
0.888 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
4 |
0 |
no |
no |
PF10911 |
A0A7Y1N3F8 |
1-77 |
nD1 |
1-80 |
80 |
e6s0zW1 |
6S0Z |
192.4.1 |
0.882 |
0.0 |
0.0 |
5.9|6.1|1 |
0.9 |
0.672 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Ribosomal protein L29 (L29p) |
Ribosomal protein L29 (L29p) |
4 |
0 |
no |
no |
PF10915 |
Q9Z7P6 |
2-235 |
nD3 |
36-73,151-205 |
93 |
e2djrA1 |
2DJR |
386.1.1 |
0.895 |
0.0 |
0.0 |
2.6|2.6|1 |
0.757 |
2.818 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
4 |
6 |
no |
no |
PF10926 |
Q838W4 |
6-374 |
nD2 |
236-300,306-330 |
90 |
e5xy3h1 |
5XY3 |
192.4.1 |
0.927 |
0.0 |
0.0 |
5.0|5.0|0 |
0.659 |
0.756 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Ribosomal protein L29 (L29p) |
Ribosomal protein L29 (L29p) |
3 |
0 |
no |
no |
PF10932 |
A0A1Y5TET8 |
2-60 |
nD1 |
6-60 |
55 |
e6gygB1 |
6GYG |
101.1.11 |
0.909 |
0.0 |
0.0 |
3.7|4.2|0 |
0.859 |
0.894 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
no |
PF10932 |
A3K110 |
2-59 |
nD1 |
6-60 |
55 |
e6gygB1 |
6GYG |
101.1.11 |
0.932 |
0.0 |
0.0 |
4.4|4.4|0 |
0.882 |
0.894 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
no |
PF10948 |
A0A1X0TET9 |
7-50 |
nD1 |
1-50 |
50 |
e5ghsD1 |
5GHS |
4076.3.1 |
0.865 |
0.0 |
0.0 |
3.8|4.8|1 |
0.845 |
0.82 |
pymol |
more |
good_domain |
a+b two layers |
L9 N-domain-like |
GINS/PriA/YqbF domain |
GINS/PriA/YqbF domain |
1 |
3 |
no |
no |
PF10948 |
A0A5E9ZLY6 |
3-43 |
nD1 |
1-45 |
45 |
e2hjqA2 |
2HJQ |
4076.3.1 |
0.86 |
0.0 |
0.0 |
3.5|3.8|1 |
0.923 |
0.738 |
pymol |
more |
good_domain |
a+b two layers |
L9 N-domain-like |
GINS/PriA/YqbF domain |
GINS/PriA/YqbF domain |
1 |
2 |
no |
no |
PF10969 |
K0ENV0 |
35-169 |
nD2 |
36-170 |
135 |
e3gheH1 |
3GHE |
11.1.1 |
0.939 |
0.0 |
0.364 |
5.2|5.2|1 |
0.832 |
1.25 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
no |
yes:out |
PF10970 |
A0A7X8MZF8 |
3-120 |
nD1 |
1-55,81-115 |
90 |
e2rnmB1 |
2RNM |
208.5.1 |
0.91 |
0.0 |
0.0 |
3.3|3.3|1 |
0.725 |
1.429 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded left-handed beta-helix |
C-terminal prion forming domain of HET-s |
C-terminal prion forming domain of HET-s |
0 |
6 |
no |
no |
PF10974 |
A0A398D9H8 |
16-338 |
nD1 |
6-210 |
205 |
e7dmnA1 |
7DMN |
4252.1.1 |
0.924 |
0.984 |
0.981 |
11.6|13.3|1 |
0.855 |
1.158 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
1 |
14 |
no |
no |
PF10974 |
A0A0Q7EP87 |
14-339 |
nD1 |
21-210 |
190 |
e6kawA1 |
6KAW |
4252.1.1 |
0.946 |
0.98 |
0.981 |
11.0|11.4|1 |
0.856 |
1.073 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
0 |
13 |
no |
no |
PF10974 |
A0A0Q7EP87 |
14-339 |
nD2 |
11-20,211-340 |
140 |
e6kawA2 |
6KAW |
4252.1.1 |
0.945 |
0.98 |
0.912 |
6.3|10.6|1 |
0.816 |
0.791 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
0 |
9 |
no |
no |
PF10974 |
A0A1D2TQ39 |
14-339 |
nD1 |
11-210 |
200 |
e6kawA1 |
6KAW |
4252.1.1 |
0.929 |
0.983 |
0.982 |
10.9|11.3|1 |
0.856 |
1.13 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
0 |
13 |
no |
no |
PF10975 |
A0A7W3FV96 |
58-125 |
nD2 |
86-125 |
40 |
e1rr7A1 |
1RR7 |
101.1.1 |
0.914 |
0.764 |
0.875 |
0.0|4.4|0 |
0.804 |
0.548 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
yes:out |
no |
PF10977 |
S3P3G5 |
47-285 |
nD3 |
91-235 |
145 |
e6seiA1 |
6SEI |
821.1.1 |
0.864 |
0.0 |
0.726 |
3.4|3.4|1 |
0.62 |
1.193 |
pymol |
more |
good_domain |
a+b three layers |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
4 |
6 |
no |
no |
PF10977 |
A0A1E5TCR2 |
37-259 |
nD1 |
1-75,206-264 |
134 |
e4hw9G7 |
4HW9 |
4.1.1 |
0.876 |
0.0 |
0.186 |
3.5|3.5|1 |
0.854 |
1.675 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
4 |
11 |
no |
no |
PF10977 |
A0A1E5TCR2 |
37-259 |
nD2 |
76-205 |
130 |
e4xm5A1 |
4XM5 |
821.1.1 |
0.886 |
0.0 |
0.735 |
4.4|4.9|1 |
0.597 |
1.07 |
pymol |
more |
good_domain |
a+b three layers |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
5 |
3 |
no |
no |
PF10983 |
A0A4R3JVF2 |
27-110 |
nD1 |
23-115 |
93 |
e3n3fA1 |
3N3F |
3761.1.1 |
0.855 |
0.0 |
0.085 |
2.5|2.5|1 |
0.838 |
1.691 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
1 |
5 |
no |
no |
PF10983 |
A0A4R3JU52 |
27-110 |
nD1 |
23-115 |
93 |
e3n3fA1 |
3N3F |
3761.1.1 |
0.853 |
0.0 |
0.101 |
3.2|3.2|1 |
0.818 |
1.691 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
1 |
5 |
no |
no |
PF10987 |
H2FZR0 |
42-256 |
nD2 |
66-260 |
195 |
e1yyvA1 |
1YYV |
101.1.2 |
0.928 |
0.0 |
0.775 |
3.4|3.6|1 |
0.834 |
2.053 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
7 |
7 |
no |
no |
PF10987 |
Q9KMB5 |
63-268 |
nD2 |
101-280 |
180 |
e1zarA1 |
1ZAR |
101.1.2 |
0.917 |
0.0 |
0.806 |
3.7|3.7|1 |
0.813 |
1.895 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
7 |
7 |
no |
no |
PF10998 |
Q0V5I5 |
203-313 |
nD2 |
196-450 |
255 |
e7e2xR1 |
7E2X |
5001.1.1 |
0.887 |
0.52 |
0.0 |
2.6|5.0|0 |
0.38 |
0.893 |
pymol |
na |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
0 |
no |
yes:6 |
PF11005 |
A0A2W0ADM5 |
17-144 |
nD1 |
21-145 |
125 |
e4ifaA1 |
4IFA |
6043.1.1 |
0.862 |
0.0 |
0.425 |
5.0|6.9|0 |
0.818 |
1.524 |
pymol |
more |
good_domain |
a+b two layers |
yfeY-like |
yfeY-like |
yfeY-like |
3 |
7 |
yes:out |
no |
PF11008 |
Q2SDH3 |
56-148 |
nD1 |
36-200 |
165 |
e7pmxA3 |
7PMX |
11.1.4 |
0.927 |
0.0 |
0.889 |
5.7|5.7|1 |
0.914 |
1.32 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
1 |
10 |
yes:out |
no |
PF11013 |
A0A239XN59 |
5-380 |
nD1 |
1-125 |
125 |
e6wxxC2 |
6WXX |
2008.1.1 |
0.909 |
0.0 |
0.0 |
4.3|5.8|1 |
0.758 |
0.613 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
4 |
5 |
no |
no |
PF11013 |
A0A4R1M029 |
5-379 |
nD1 |
1-120 |
120 |
e5gkeA2 |
5GKE |
2008.1.1 |
0.945 |
0.0 |
0.0 |
6.0|6.0|1 |
0.822 |
0.588 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
6 |
no |
no |
PF11013 |
A0A7V3UDB0 |
3-370 |
nD1 |
1-115 |
115 |
e5gkeA2 |
5GKE |
2008.1.1 |
0.884 |
0.0 |
0.0 |
5.1|5.1|1 |
0.768 |
0.564 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
5 |
no |
no |
PF11020 |
A5CC80 |
1-81 |
nD1 |
1-75 |
75 |
e2bsqE1 |
2BSQ |
101.1.11 |
0.871 |
0.36 |
0.917 |
2.0|2.2|0 |
0.612 |
1.22 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
3 |
no |
no |
PF11023 |
Q9KEA2 |
4-114 |
nD2 |
66-115 |
50 |
e2aqcA2 |
2AQC |
375.4.1 |
0.893 |
0.977 |
0.974 |
0.0|2.7|0 |
0.781 |
0.833 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Nucleolar RNA-binding protein Nop10-like |
Nucleolar RNA-binding protein Nop10-like |
0 |
4 |
no |
yes:out |
PF11023 |
Q8CV51 |
7-116 |
nD2 |
66-105 |
40 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.949 |
0.978 |
0.981 |
0.0|8.7|0 |
0.835 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
yes:out |
PF11059 |
Q6LS16 |
28-325 |
nD1 |
31-325 |
295 |
e4v3gA1 |
4V3G |
5084.5.4 |
0.942 |
0.98 |
0.983 |
18.9|18.9|1 |
0.857 |
0.702 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
5 |
15 |
yes:out |
no |
PF11059 |
A0A6L9FQC7 |
4-304 |
nD1 |
1-305 |
305 |
e4v3gA1 |
4V3G |
5084.5.4 |
0.949 |
0.976 |
0.979 |
19.3|19.3|1 |
0.862 |
0.726 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
3 |
15 |
no |
no |
PF11060 |
Q7NY92 |
22-268 |
nD2 |
81-270 |
190 |
e6c29A2 |
6C29 |
11.1.1 |
0.949 |
0.0 |
0.72 |
6.9|6.9|1 |
0.945 |
1.759 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
13 |
yes:out |
no |
PF11060 |
A0A0J6MTG5 |
9-247 |
nD3 |
161-249 |
89 |
e6grtB1 |
6GRT |
11.1.1 |
0.914 |
0.0 |
0.0 |
3.7|5.4|1 |
0.38 |
0.824 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
6 |
no |
no |
PF11062 |
A0A2N2R7E1 |
3-381 |
nD1 |
11-85,151-165,246-255 |
100 |
e4iy8C1 |
4IY8 |
109.4.1 |
0.864 |
0.0 |
0.0 |
6.7|6.7|1 |
0.736 |
0.35 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
2 |
no |
no |
PF11062 |
A0A2N2RZH5 |
3-365 |
nD1 |
1-70,136-150,231-240 |
95 |
e4pc4C1 |
4PC4 |
109.4.1 |
0.873 |
0.0 |
0.0 |
5.1|6.4|1 |
0.698 |
0.332 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
2 |
no |
no |
PF11067 |
G4QHG7 |
125-446 |
nD2 |
6-15,61-285 |
235 |
e7ajqE1 |
7AJQ |
3758.2.1 |
0.876 |
0.095 |
0.149 |
5.3|6.0|0 |
0.483 |
0.996 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial hemolysins-like |
Biopolymer transport protein ExbB |
Biopolymer transport protein ExbB |
8 |
3 |
no |
yes:4 |
PF11067 |
G4QHG7 |
125-446 |
nD3 |
321-455 |
135 |
e1sviA1 |
1SVI |
2004.1.1 |
0.924 |
0.0 |
0.111 |
7.6|7.6|0 |
0.72 |
0.605 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
3 |
5 |
no |
yes:out |
PF11067 |
Q9I6E8 |
147-444 |
nD2 |
66-199,221-235,251-300 |
199 |
e7rdrC2 |
7RDR |
109.3.1 |
0.872 |
0.0 |
0.0 |
6.3|6.3|1 |
0.461 |
1.0 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
1 |
no |
yes:4 |
PF11067 |
A7HEJ4 |
192-524 |
nD3 |
406-535 |
130 |
e2il1A1 |
2IL1 |
2004.1.1 |
0.928 |
0.0 |
0.0 |
7.6|8.5|1 |
0.721 |
0.583 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
3 |
6 |
no |
yes:out |
PF11076 |
A0A0M2KCR8 |
1-127 |
nD1 |
6-115 |
110 |
e6pv5A3 |
6PV5 |
4266.1.1 |
0.871 |
0.0 |
0.0 |
6.6|6.6|1 |
0.795 |
0.71 |
pymol |
more |
good_domain |
alpha bundles |
Hyaluronidase domain-like |
Hyaluronidase post-catalytic domain-like |
Hyaluronidase post-catalytic domain-like |
4 |
0 |
no |
yes:4 |
PF11076 |
A0A1V9DQ06 |
1-122 |
nD1 |
16-115 |
100 |
e3uo3A3 |
3UO3 |
622.1.1 |
0.911 |
0.0 |
0.0 |
6.8|6.8|1 |
0.868 |
1.136 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
4 |
0 |
no |
yes:4 |
PF11082 |
Q1LFT5 |
21-97 |
nD1 |
46-124 |
79 |
e6paiC2 |
6PAI |
243.3.1 |
0.933 |
0.0 |
0.0 |
6.4|7.0|1 |
0.895 |
0.79 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF11082 |
A0A2N5C2X4 |
19-89 |
nD1 |
41-115 |
75 |
e6paiC2 |
6PAI |
243.3.1 |
0.935 |
0.0 |
0.0 |
6.6|7.0|1 |
0.872 |
0.75 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF11082 |
A0A1H0QFI6 |
19-89 |
nD1 |
41-115 |
75 |
e3imaB1 |
3IMA |
243.3.1 |
0.944 |
0.0 |
0.0 |
6.4|7.0|1 |
0.847 |
0.75 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF11083 |
Q8DZ67 |
486-607 |
nD5 |
481-615 |
135 |
e6qj0A1 |
6QJ0 |
3922.1.1 |
0.852 |
0.0 |
0.449 |
9.5|9.9|0 |
0.699 |
1.047 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
4 |
0 |
no |
no |
PF11083 |
A4VUU0 |
484-607 |
nD5 |
506-610 |
105 |
e6y07A1 |
6Y07 |
192.29.1 |
0.914 |
0.0 |
0.0 |
8.1|8.5|0 |
0.668 |
1.382 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
no |
PF11116 |
A0A4Y8IYU2 |
1-81 |
nD1 |
1-90 |
90 |
e5olkA2 |
5OLK |
103.2.1 |
0.865 |
0.0 |
0.0 |
5.8|5.8|1 |
0.848 |
0.896 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
ATP cone |
ATP cone |
5 |
0 |
no |
no |
PF11116 |
A0A511W609 |
2-80 |
nD1 |
1-90 |
90 |
e5olkA2 |
5OLK |
103.2.1 |
0.869 |
0.0 |
0.0 |
5.7|5.7|1 |
0.859 |
0.896 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
ATP cone |
ATP cone |
5 |
0 |
no |
no |
PF11116 |
A0A1G9ZB37 |
1-81 |
nD1 |
1-90 |
90 |
e5olkA2 |
5OLK |
103.2.1 |
0.869 |
0.0 |
0.0 |
5.7|5.7|1 |
0.859 |
0.896 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
ATP cone |
ATP cone |
5 |
0 |
no |
no |
PF11132 |
A0A1S1YEC0 |
6-77 |
nD1 |
6-75 |
70 |
e6nnbA1 |
6NNB |
4.1.1 |
0.946 |
0.0 |
0.631 |
4.0|4.6|1 |
0.896 |
0.875 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
4 |
no |
no |
PF11136 |
Q2KYF5 |
14-138 |
nD1 |
16-140 |
125 |
e7dqxE1 |
7DQX |
244.3.1 |
0.93 |
0.0 |
0.421 |
6.0|7.0|1 |
0.832 |
1.087 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
4 |
4 |
no |
no |
PF11136 |
W0PEI0 |
12-136 |
nD1 |
11-150 |
140 |
e2w3sE2 |
2W3S |
244.3.1 |
0.897 |
0.0 |
0.289 |
4.7|6.2|1 |
0.857 |
1.217 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
4 |
4 |
no |
no |
PF11136 |
F4GUQ6 |
14-137 |
nD1 |
11-150 |
140 |
e4eb5C1 |
4EB5 |
244.3.1 |
0.883 |
0.0 |
0.36 |
4.4|6.2|1 |
0.831 |
1.217 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
6 |
no |
no |
PF11145 |
K7KWD9 |
48-991 |
nD3 |
496-575,601-710 |
190 |
e2gtlM1 |
2GTL |
9.3.1 |
0.947 |
0.0 |
0.0 |
7.3|7.4|1 |
0.866 |
1.557 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
5 |
8 |
yes:out |
yes:out |
PF11145 |
E0CSL0 |
48-904 |
nD2 |
251-410 |
160 |
e2gtlN1 |
2GTL |
9.3.1 |
0.922 |
0.0 |
0.0 |
7.8|8.1|1 |
0.852 |
1.311 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
2 |
9 |
no |
yes:out |
PF11145 |
E0CSL0 |
48-904 |
nD4 |
641-850,876-900 |
235 |
e4qndA1 |
4QND |
6155.1.1 |
0.92 |
0.0 |
0.0 |
6.0|6.4|0 |
0.947 |
2.686 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TOG superfamily |
SWEET transporter |
SWEET transporter |
8 |
0 |
no |
yes:6 |
PF11145 |
M4DR45 |
64-1014 |
nD1 |
61-280 |
220 |
e2gtlN1 |
2GTL |
9.3.1 |
0.927 |
0.0 |
0.0 |
8.3|8.3|1 |
0.911 |
1.803 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
2 |
9 |
yes:out |
yes:out |
PF11145 |
M4DR45 |
64-1014 |
nD2 |
301-490 |
190 |
e4u8uO2 |
4U8U |
9.3.1 |
0.949 |
0.0 |
0.0 |
7.1|7.1|1 |
0.877 |
1.557 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
2 |
8 |
yes:out |
yes:out |
PF11145 |
M4DR45 |
64-1014 |
nD3 |
506-585,611-720 |
190 |
e4u8uO2 |
4U8U |
9.3.1 |
0.928 |
0.0 |
0.0 |
6.7|7.0|1 |
0.838 |
1.557 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
5 |
8 |
yes:out |
yes:out |
PF11153 |
A0KHB2 |
17-209 |
nD1 |
26-220 |
195 |
e2mcaA1 |
2MCA |
11.1.4 |
0.879 |
0.0 |
0.0 |
6.4|9.4|0 |
0.933 |
1.56 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
5 |
10 |
yes:out |
no |
PF11157 |
A0A235AQ27 |
4-154 |
nD1 |
6-155 |
150 |
e5nmoA1 |
5NMO |
3922.1.1 |
0.906 |
0.0 |
0.0 |
5.9|6.1|0 |
0.782 |
1.163 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
6 |
0 |
yes:in |
yes:1 |
PF11162 |
E9AI94 |
11-156 |
nD1 |
31-185 |
155 |
e1byfB1 |
1BYF |
209.1.1 |
0.948 |
0.0 |
0.0 |
12.2|14.2|1 |
0.949 |
1.202 |
pymol |
more |
good_domain |
a+b complex topology |
C-type lectin-like |
C-type lectin-like |
C-type lectin-like |
1 |
9 |
yes:out |
yes:out |
PF11170 |
A0A6B2MD12 |
25-382 |
nD3 |
291-379,401-410 |
99 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.943 |
0.0 |
0.0 |
6.3|7.0|1 |
0.857 |
0.647 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
0 |
8 |
no |
no |
PF11174 |
A3Q9E1 |
1-56 |
nD1 |
1-55 |
55 |
e5wurC1 |
5WUR |
564.1.1 |
0.914 |
0.0 |
0.0 |
5.0|5.2|1 |
0.892 |
0.769 |
pymol |
more |
good_domain |
alpha arrays |
N-terminal, cytoplasmic domain of anti-sigma factors |
N-terminal, cytoplasmic domain of anti-sigma factors |
N-terminal, cytoplasmic domain of anti-sigma factors |
3 |
0 |
yes:in |
yes:1 |
PF11174 |
A0A4Y6IX02 |
2-56 |
nD1 |
1-55 |
55 |
e5wurC1 |
5WUR |
564.1.1 |
0.914 |
0.0 |
0.0 |
5.1|5.2|1 |
0.892 |
0.769 |
pymol |
more |
good_domain |
alpha arrays |
N-terminal, cytoplasmic domain of anti-sigma factors |
N-terminal, cytoplasmic domain of anti-sigma factors |
N-terminal, cytoplasmic domain of anti-sigma factors |
3 |
0 |
yes:in |
yes:1 |
PF11181 |
A0A511FBN1 |
18-104 |
nD1 |
16-55,131-155 |
65 |
e2hfvA1 |
2HFV |
304.5.1 |
0.915 |
0.424 |
0.466 |
5.6|6.1|0 |
0.76 |
0.596 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
GlnB-like |
GlnB-like |
3 |
3 |
no |
yes:out |
PF11181 |
A0A1E5JZI4 |
3-94 |
nD1 |
1-110 |
110 |
e7bqbA1 |
7BQB |
101.1.4 |
0.945 |
0.798 |
0.798 |
5.5|5.5|1 |
0.603 |
1.41 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
5 |
3 |
no |
no |
PF11181 |
A0A2S0WPD1 |
11-100 |
nD1 |
6-50,126-155 |
75 |
e4w4mK1 |
4W4M |
327.16.1 |
0.898 |
0.289 |
0.428 |
7.9|7.9|1 |
0.953 |
1.049 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif II in type III secretion system |
Ring-building motif II in type III secretion system |
3 |
3 |
no |
yes:out |
PF11193 |
A0A5B0WWD5 |
11-119 |
nD1 |
1-180 |
180 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.912 |
0.0 |
0.0 |
9.5|11.0|0 |
0.976 |
2.449 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
5 |
6 |
no |
yes:2 |
PF11195 |
A0A132Z7R2 |
2-72 |
nD1 |
1-73 |
73 |
e3fb9B1 |
3FB9 |
4.1.1 |
0.926 |
0.0 |
0.0 |
2.3|2.3|1 |
0.808 |
0.912 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
5 |
no |
no |
PF11197 |
A0A6G9QIV7 |
1-71 |
nD1 |
1-70 |
70 |
e6rk3A3 |
6RK3 |
2.1.1 |
0.927 |
0.0 |
0.485 |
5.4|5.4|1 |
0.833 |
0.673 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
5 |
no |
no |
PF11197 |
A0A2N7CQA6 |
1-71 |
nD1 |
1-70 |
70 |
e6rk3A3 |
6RK3 |
2.1.1 |
0.927 |
0.0 |
0.449 |
5.4|5.4|1 |
0.833 |
0.673 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
5 |
no |
no |
PF11197 |
A0A0Q0I165 |
1-71 |
nD1 |
1-70 |
70 |
e3oyyA1 |
3OYY |
2.1.1 |
0.927 |
0.0 |
0.515 |
5.4|5.5|1 |
0.841 |
0.673 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
5 |
no |
no |
PF11198 |
A0A2K9VRP0 |
8-182 |
nD2 |
76-120 |
45 |
e2avuF1 |
2AVU |
101.28.1 |
0.906 |
0.975 |
0.964 |
3.1|3.2|0 |
0.846 |
0.714 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
helical bundles in FlhC-like proteins |
helical bundles in FlhC-like proteins |
3 |
0 |
no |
no |
PF11200 |
A0A061D5C3 |
24-410 |
nD1 |
21-125,351-400 |
155 |
e2rldC1 |
2RLD |
633.10.1 |
0.933 |
0.0 |
0.0 |
8.5|8.5|1 |
0.965 |
1.348 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
IVS-encoded protein-like |
IVS-encoded protein-like |
4 |
1 |
no |
yes:4 |
PF11201 |
A0A454CV93 |
44-193 |
nD2 |
41-195 |
155 |
e4khbB1 |
4KHB |
220.1.1 |
0.914 |
0.713 |
0.668 |
4.2|6.2|1 |
0.755 |
1.27 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
7 |
6 |
no |
yes:out |
PF11201 |
A0A6G9WIL6 |
67-216 |
nD2 |
1-10,61-220 |
170 |
e4khbB1 |
4KHB |
220.1.1 |
0.884 |
0.558 |
0.669 |
5.0|6.9|1 |
0.855 |
1.393 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
6 |
7 |
no |
yes:out |
PF11205 |
A0A1C0TXF4 |
7-154 |
nD1 |
6-105 |
100 |
e5xsvD2 |
5XSV |
11.1.5 |
0.896 |
0.0 |
0.0 |
4.5|4.5|1 |
0.689 |
0.649 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
1 |
7 |
no |
no |
PF11218 |
Q9PAG4 |
32-226 |
nD2 |
96-160 |
65 |
e3wy1B1 |
3WY1 |
12.1.1 |
0.9 |
0.0 |
0.0 |
3.2|3.2|0 |
0.709 |
0.722 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
0 |
6 |
yes:out |
no |
PF11218 |
Q9PAG4 |
32-226 |
nD3 |
166-229 |
64 |
e3wy1B1 |
3WY1 |
12.1.1 |
0.911 |
0.0 |
0.0 |
3.1|3.1|1 |
0.732 |
0.711 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
6 |
yes:out |
no |
PF11218 |
Q8P6D9 |
36-253 |
nD1 |
36-95 |
60 |
e1wzaA1 |
1WZA |
12.1.1 |
0.92 |
0.0 |
0.0 |
2.4|3.1|1 |
0.664 |
0.667 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
0 |
6 |
yes:out |
no |
PF11218 |
Q8P6D9 |
36-253 |
nD2 |
111-170 |
60 |
e6t5oDDD3 |
6T5O |
12.1.1 |
0.934 |
0.0 |
0.0 |
3.6|4.1|1 |
0.729 |
0.667 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
6 |
yes:out |
no |
PF11218 |
Q8P6D9 |
36-253 |
nD3 |
191-255 |
65 |
e1wzaA1 |
1WZA |
12.1.1 |
0.946 |
0.0 |
0.0 |
4.0|4.5|1 |
0.707 |
0.722 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
0 |
6 |
yes:out |
no |
PF11218 |
Q8PAB3 |
10-205 |
nD1 |
11-70 |
60 |
e6t5oDDD3 |
6T5O |
12.1.1 |
0.902 |
0.0 |
0.0 |
3.2|3.2|1 |
0.696 |
0.667 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
6 |
no |
no |
PF11218 |
Q8PAB3 |
10-205 |
nD2 |
76-140 |
65 |
e6t5oDDD3 |
6T5O |
12.1.1 |
0.908 |
0.0 |
0.0 |
3.1|3.5|1 |
0.727 |
0.722 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
0 |
6 |
no |
no |
PF11222 |
A0A5A7WAZ2 |
17-90 |
nD1 |
1-90 |
90 |
e2w2uA2 |
2W2U |
604.12.1 |
0.901 |
0.0 |
0.0 |
6.8|6.9|0 |
0.952 |
1.04 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
0 |
no |
yes:3 |
PF11227 |
A0A2P7RDH8 |
43-254 |
nD1 |
1-250 |
250 |
e1ltuA1 |
1LTU |
257.1.1 |
0.923 |
0.328 |
0.125 |
7.8|8.4|1 |
0.612 |
0.817 |
pymol |
more |
good_domain |
a+b complex topology |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
11 |
7 |
no |
no |
PF11227 |
A0A1M3QIF4 |
53-258 |
nD1 |
12-234 |
223 |
e1ltuA1 |
1LTU |
257.1.1 |
0.924 |
0.267 |
0.0 |
7.7|8.3|1 |
0.572 |
0.729 |
pymol |
more |
good_domain |
a+b complex topology |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |
9 |
6 |
no |
no |
PF11228 |
V6K100 |
3-227 |
nD2 |
151-220 |
70 |
e1js2A1 |
1JS2 |
374.1.1 |
0.93 |
0.512 |
0.546 |
3.6|3.8|1 |
0.6 |
1.014 |
pymol |
more |
good_domain |
few secondary structure elements |
HIPIP (high potential iron protein) |
HIPIP (high potential iron protein) |
HIPIP (high potential iron protein) |
2 |
4 |
no |
no |
PF11228 |
C8X801 |
60-250 |
nD2 |
147-243 |
97 |
e1hpiA1 |
1HPI |
374.1.1 |
0.913 |
0.513 |
0.555 |
2.7|3.4|1 |
0.685 |
1.406 |
pymol |
more |
good_domain |
few secondary structure elements |
HIPIP (high potential iron protein) |
HIPIP (high potential iron protein) |
HIPIP (high potential iron protein) |
3 |
5 |
no |
no |
PF11231 |
Q21LC6 |
34-288 |
nD1 |
6-290 |
285 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.914 |
0.89 |
0.922 |
17.7|17.9|1 |
0.851 |
0.774 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
12 |
yes:in |
no |
PF11231 |
R4YKL0 |
11-256 |
nD1 |
6-259 |
254 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.933 |
0.875 |
0.921 |
17.9|18.3|1 |
0.851 |
0.69 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
11 |
no |
no |
PF11231 |
U1KE99 |
10-255 |
nD1 |
6-258 |
253 |
e2wjqA1 |
2WJQ |
5084.5.1 |
0.934 |
0.876 |
0.887 |
17.9|18.2|1 |
0.851 |
0.688 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
11 |
no |
no |
PF11245 |
P76498 |
44-273 |
nD2 |
156-273 |
118 |
e4hh8A1 |
4HH8 |
11.1.1 |
0.888 |
0.0 |
0.0 |
2.9|3.8|1 |
0.735 |
1.093 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
6 |
yes:out |
no |
PF11248 |
K0F2J9 |
1-61 |
nD1 |
1-63 |
63 |
e6d0iB1 |
6D0I |
101.30.1 |
0.944 |
0.909 |
0.917 |
4.7|4.7|0 |
0.85 |
0.875 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Rv2175c |
Rv2175c |
3 |
2 |
no |
no |
PF11249 |
A0A148N6P1 |
14-189 |
nD1 |
1-193 |
193 |
e6ve7z1 |
6VE7 |
10.1.2 |
0.933 |
0.0 |
0.96 |
14.4|14.4|1 |
0.949 |
1.229 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
13 |
no |
no |
PF11249 |
A0A7V2I9I8 |
20-197 |
nD1 |
1-200 |
200 |
e1gwmA1 |
1GWM |
10.1.2 |
0.932 |
0.541 |
0.951 |
9.3|13.3|1 |
0.913 |
1.274 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
12 |
no |
no |
PF11249 |
A0A1F7NQ41 |
28-191 |
nD1 |
1-195 |
195 |
e6ve7z1 |
6VE7 |
10.1.2 |
0.931 |
0.165 |
0.938 |
12.8|13.4|1 |
0.923 |
1.242 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
11 |
no |
no |
PF11261 |
H3C644 |
14-65 |
nD1 |
16-60 |
45 |
e1d4uA2 |
1D4U |
377.1.1 |
0.891 |
0.642 |
0.384 |
0.0|3.3|0 |
0.833 |
0.9 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
3 |
2 |
no |
no |
PF11261 |
A0A663FID0 |
4-55 |
nD1 |
6-50 |
45 |
e1d4uA2 |
1D4U |
377.1.1 |
0.896 |
0.547 |
0.339 |
0.0|3.2|0 |
0.833 |
0.9 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
2 |
2 |
no |
no |
PF11263 |
W6A0Q0 |
329-582 |
nD2 |
131-140,176-340,366-390,416-485,516-580 |
335 |
e4v3gA1 |
4V3G |
5084.5.4 |
0.924 |
0.0 |
0.0 |
10.2|12.0|0 |
0.743 |
0.798 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
4 |
13 |
yes:out |
no |
PF11272 |
A6W6U0 |
14-69 |
nD1 |
31-70 |
40 |
e5jffD1 |
5JFF |
3419.1.1 |
0.903 |
0.802 |
0.821 |
0.0|0.0|0 |
0.485 |
0.727 |
pymol |
more |
good_domain |
alpha bundles |
Antitoxin VbhA |
Antitoxin VbhA |
Antitoxin VbhA |
2 |
1 |
no |
no |
PF11279 |
A0A7Y3ZRY0 |
5-307 |
nD2 |
1-30,191-305 |
145 |
e1g8xB5 |
1G8X |
604.1.1 |
0.925 |
0.0 |
0.0 |
6.8|6.8|1 |
0.906 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
1 |
no |
no |
PF11279 |
A0A2A2MW60 |
5-307 |
nD2 |
1-30,191-305 |
145 |
e1g8xB5 |
1G8X |
604.1.1 |
0.888 |
0.0 |
0.0 |
7.4|7.4|1 |
0.889 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
no |
PF11280 |
B7VS98 |
5-81 |
nD1 |
6-80 |
75 |
e4py5A2 |
4PY5 |
331.1.1 |
0.909 |
0.0 |
0.472 |
3.6|3.8|0 |
0.855 |
0.794 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
3 |
5 |
no |
no |
PF11280 |
A1SXN8 |
6-82 |
nD1 |
6-80 |
75 |
e3vn5A2 |
3VN5 |
331.1.1 |
0.92 |
0.0 |
0.471 |
4.2|4.6|0 |
0.863 |
0.794 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
3 |
5 |
no |
no |
PF11281 |
A0A4R2FGH4 |
38-350 |
nD2 |
196-345 |
150 |
e2vjvB1 |
2VJV |
304.55.2 |
0.886 |
0.0 |
0.0 |
5.4|5.4|1 |
0.771 |
1.107 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Transposase IS200-like |
3 |
8 |
no |
no |
PF11281 |
A0A1E3V498 |
40-353 |
nD1 |
21-155,181-200 |
155 |
e3w9hA19 |
3W9H |
304.28.1 |
0.936 |
0.0 |
0.0 |
6.8|6.8|1 |
0.851 |
1.49 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ferredoxin domains in multidrug efflux transporter |
Multidrug efflux transporter AcrB pore domain |
3 |
9 |
no |
no |
PF11284 |
A0A3R0FVT9 |
21-106 |
nD1 |
1-108 |
108 |
e1dmlG1 |
1DML |
227.1.1 |
0.863 |
0.0 |
0.0 |
2.8|5.5|1 |
0.518 |
0.857 |
pymol |
more |
good_domain |
a+b two layers |
DNA clamp |
DNA clamp |
DNA clamp |
3 |
7 |
no |
no |
PF11284 |
A0A2T8X1V0 |
21-106 |
nD1 |
1-108 |
108 |
e1dmlG1 |
1DML |
227.1.1 |
0.858 |
0.0 |
0.0 |
2.8|5.5|1 |
0.525 |
0.857 |
pymol |
more |
good_domain |
a+b two layers |
DNA clamp |
DNA clamp |
DNA clamp |
3 |
6 |
no |
no |
PF11284 |
A0A628R6R0 |
21-106 |
nD1 |
1-108 |
108 |
e1dmlG1 |
1DML |
227.1.1 |
0.858 |
0.0 |
0.0 |
2.8|5.5|1 |
0.525 |
0.857 |
pymol |
more |
good_domain |
a+b two layers |
DNA clamp |
DNA clamp |
DNA clamp |
3 |
6 |
no |
no |
PF11292 |
A0A2W1P5Z3 |
4-141 |
nD1 |
11-55 |
45 |
e6jo6K1 |
6JO6 |
5063.1.1 |
0.861 |
0.0 |
0.0 |
4.9|4.9|1 |
0.948 |
0.577 |
pymol |
more |
good_domain |
alpha bundles |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
3 |
0 |
no |
yes:2 |
PF11292 |
A0A2W1P5Z3 |
4-141 |
nD2 |
1-10,56-143 |
98 |
e3fssA2 |
3FSS |
220.1.1 |
0.865 |
0.0 |
0.0 |
7.2|8.2|1 |
0.855 |
0.803 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF11292 |
A0A2W1XXR2 |
4-141 |
nD2 |
1-10,56-143 |
98 |
e3fssA2 |
3FSS |
220.1.1 |
0.865 |
0.0 |
0.0 |
7.2|8.2|1 |
0.862 |
0.803 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF11292 |
A0A2W1RRY2 |
4-141 |
nD2 |
1-10,56-143 |
98 |
e3fssA2 |
3FSS |
220.1.1 |
0.865 |
0.0 |
0.0 |
7.2|7.9|1 |
0.855 |
0.803 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF11294 |
A9B6F6 |
5-383 |
nD3 |
181-240,296-385 |
150 |
e6khuA1 |
6KHU |
304.48.1 |
0.937 |
0.0 |
0.0 |
7.0|8.5|1 |
0.805 |
0.686 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Adenylyl and guanylyl cyclase catalytic domain-like |
Adenylyl and guanylyl cyclase catalytic domain-like |
4 |
6 |
no |
no |
PF11294 |
Q1GLN6 |
7-378 |
nD2 |
176-233,286-380 |
153 |
e4oyzA2 |
4OYZ |
304.48.1 |
0.864 |
0.0 |
0.0 |
5.6|8.9|1 |
0.709 |
0.7 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Adenylyl and guanylyl cyclase catalytic domain-like |
Adenylyl and guanylyl cyclase catalytic domain-like |
4 |
5 |
no |
no |
PF11294 |
Q89CL9 |
7-377 |
nD3 |
176-225,296-380 |
135 |
e6khuA1 |
6KHU |
304.48.1 |
0.906 |
0.0 |
0.0 |
6.7|7.9|1 |
0.782 |
0.618 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Adenylyl and guanylyl cyclase catalytic domain-like |
Adenylyl and guanylyl cyclase catalytic domain-like |
4 |
5 |
no |
no |
PF11296 |
C3PG80 |
8-273 |
nD2 |
96-280 |
185 |
e6njwA1 |
6NJW |
2006.1.3 |
0.945 |
0.626 |
0.951 |
7.0|7.0|1 |
0.664 |
1.36 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
Toprim domain |
7 |
6 |
no |
no |
PF11300 |
Q24MX3 |
8-132 |
nD2 |
86-155 |
70 |
e7nfuA1 |
7NFU |
3317.1.1 |
0.932 |
0.885 |
0.875 |
5.7|5.7|1 |
0.841 |
1.207 |
pymol |
more |
good_domain |
alpha arrays |
KorB C-terminal domain-like |
KorB C-terminal domain |
KorB C-terminal domain |
3 |
0 |
no |
no |
PF11300 |
Q24MJ9 |
12-142 |
nD3 |
81-145 |
65 |
e7bnrB3 |
7BNR |
3317.1.1 |
0.931 |
0.912 |
0.891 |
5.4|5.4|1 |
0.825 |
1.121 |
pymol |
more |
good_domain |
alpha arrays |
KorB C-terminal domain-like |
KorB C-terminal domain |
KorB C-terminal domain |
3 |
0 |
no |
no |
PF11301 |
Q87RX7 |
63-417 |
nD2 |
196-419 |
224 |
e6kxuC2 |
6KXU |
11.2.1 |
0.941 |
0.0 |
0.0 |
7.0|7.0|1 |
0.897 |
1.589 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
5 |
8 |
yes:out |
no |
PF11301 |
Q9KRJ6 |
60-413 |
nD2 |
191-414 |
224 |
e6kxuC2 |
6KXU |
11.2.1 |
0.926 |
0.0 |
0.0 |
7.1|7.2|1 |
0.896 |
1.589 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
5 |
9 |
yes:out |
no |
PF11303 |
C8XIA0 |
102-232 |
nD2 |
61-80,106-225 |
140 |
e5gu6A1 |
5GU6 |
2485.1.1 |
0.909 |
0.0 |
0.0 |
4.0|5.4|1 |
0.873 |
1.239 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Thioredoxin-like |
Thioredoxin-like |
3 |
6 |
no |
yes:out |
PF11303 |
A0A5N9G455 |
15-138 |
nD1 |
6-140 |
135 |
e5gu6A1 |
5GU6 |
2485.1.1 |
0.929 |
0.0 |
0.233 |
5.8|7.8|1 |
0.873 |
1.195 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Thioredoxin-like |
Thioredoxin-like |
3 |
4 |
no |
no |
PF11303 |
A0A2D6GD21 |
15-138 |
nD1 |
6-140 |
135 |
e5gu6A1 |
5GU6 |
2485.1.1 |
0.929 |
0.0 |
0.233 |
5.8|7.8|1 |
0.873 |
1.195 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Thioredoxin-like |
Thioredoxin-like |
3 |
4 |
no |
no |
PF11304 |
A0A673G3E6 |
57-155 |
nD1 |
1-255 |
255 |
e3p4gB1 |
3P4G |
207.6.1 |
0.923 |
0.0 |
0.0 |
23.3|23.3|1 |
0.849 |
1.409 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
0 |
23 |
no |
no |
PF11306 |
C1F750 |
20-246 |
nD1 |
31-250 |
220 |
e6ntrC1 |
6NTR |
71.2.1 |
0.929 |
0.955 |
0.94 |
15.0|15.0|1 |
0.894 |
1.028 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
2 |
14 |
yes:out |
no |
PF11306 |
C6VUG6 |
16-258 |
nD1 |
31-265 |
235 |
e6ntrC1 |
6NTR |
71.2.1 |
0.911 |
0.952 |
0.915 |
14.0|14.0|1 |
0.866 |
1.098 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
2 |
16 |
yes:out |
no |
PF11308 |
B7VSN0 |
407-732 |
nD2 |
266-740,761-770 |
485 |
e7jjtA1 |
7JJT |
2002.1.1 |
0.92 |
0.0 |
1.0 |
12.4|23.1|1 |
0.819 |
1.55 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
13 |
18 |
yes:out |
no |
PF11317 |
A0A1D9GAG2 |
8-120 |
nD1 |
6-123 |
118 |
e3fssA2 |
3FSS |
220.1.1 |
0.929 |
0.0 |
0.0 |
8.3|9.2|1 |
0.934 |
0.967 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
4 |
6 |
no |
yes:1 |
PF11317 |
A0A6M0EKE5 |
14-127 |
nD1 |
11-125 |
115 |
e3fssA2 |
3FSS |
220.1.1 |
0.912 |
0.0 |
0.0 |
8.0|8.6|1 |
0.905 |
0.943 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
7 |
no |
yes:2 |
PF11318 |
A0ZD64 |
44-241 |
nD1 |
36-244 |
209 |
e3w9iF8 |
3W9I |
5067.1.1 |
0.89 |
0.12 |
0.0 |
4.6|5.0|1 |
0.6 |
0.954 |
pymol |
more |
good_domain |
alpha bundles |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
9 |
0 |
no |
yes:7 |
PF11320 |
A0A2T2RV00 |
1-121 |
nD1 |
1-125 |
125 |
e2e8yA1 |
2E8Y |
11.1.1 |
0.923 |
0.0 |
0.222 |
4.9|7.0|1 |
0.926 |
1.157 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
no |
no |
PF11322 |
A0A1F4G2A6 |
1-123 |
nD1 |
1-120 |
120 |
e3osvB1 |
3OSV |
11.1.1 |
0.876 |
0.0 |
0.949 |
5.5|6.8|0 |
0.914 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
9 |
no |
no |
PF11322 |
A0A5C9BSL7 |
4-129 |
nD1 |
1-130 |
130 |
e5aotA1 |
5AOT |
10.1.2 |
0.88 |
0.0 |
0.587 |
6.2|7.3|0 |
0.884 |
0.828 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
10 |
no |
no |
PF11336 |
Q63N34 |
1-524 |
nD1 |
121-524 |
404 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.927 |
0.999 |
0.999 |
27.5|27.5|1 |
0.923 |
1.098 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
23 |
yes:out |
no |
PF11337 |
A0A2J9AVA6 |
3-77 |
nD1 |
6-120 |
115 |
e5boiA3 |
5BOI |
243.3.1 |
0.869 |
0.0 |
0.424 |
5.2|5.2|1 |
0.849 |
1.15 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:in |
no |
PF11337 |
Q8Y9P6 |
4-81 |
nD1 |
11-120 |
110 |
e5boiA2 |
5BOI |
243.3.1 |
0.913 |
0.0 |
0.0 |
5.3|5.3|1 |
0.916 |
1.1 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
5 |
5 |
no |
yes:1 |
PF11343 |
A0A2W6DKV1 |
7-161 |
nD1 |
1-110,131-150 |
130 |
e6qw65C4 |
6QW6 |
304.24.1 |
0.938 |
0.0 |
0.0 |
5.7|5.8|1 |
0.82 |
1.421 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
3 |
5 |
no |
no |
PF11352 |
Q7NPJ1 |
41-127 |
nD1 |
51-130 |
80 |
e3n3fA1 |
3N3F |
3761.1.1 |
0.864 |
0.0 |
0.0 |
4.9|4.9|1 |
0.864 |
1.455 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
3 |
4 |
no |
no |
PF11352 |
K9TW12 |
3-90 |
nD1 |
11-85 |
75 |
e3n3fA1 |
3N3F |
3761.1.1 |
0.868 |
0.0 |
0.0 |
5.0|5.0|1 |
0.864 |
1.364 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
Major tropism determinant (Mtd) trimerization domain-related |
3 |
4 |
no |
no |
PF11353 |
Q8DGQ3 |
50-253 |
nD1 |
46-230 |
185 |
e2nc8A1 |
2NC8 |
4081.1.1 |
0.949 |
0.998 |
0.998 |
10.7|10.7|1 |
0.813 |
0.894 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
4 |
11 |
yes:out |
yes:1 |
PF11354 |
Q8ZM31 |
17-174 |
nD1 |
11-180 |
170 |
e1s28A1 |
1S28 |
241.1.1 |
0.853 |
0.0 |
0.0 |
6.9|7.9|1 |
0.91 |
1.278 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
4 |
7 |
no |
no |
PF11354 |
A0A2N8BHL5 |
8-170 |
nD1 |
1-173 |
173 |
e2plgA1 |
2PLG |
241.1.1 |
0.853 |
0.0 |
0.0 |
5.1|7.6|1 |
0.901 |
1.301 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
4 |
8 |
no |
no |
PF11354 |
A0A3G7X2F6 |
8-170 |
nD1 |
1-173 |
173 |
e5fr7B1 |
5FR7 |
241.1.1 |
0.894 |
0.0 |
0.0 |
6.3|8.2|1 |
0.885 |
1.301 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
5 |
6 |
yes:in |
no |
PF11355 |
Q87KD0 |
22-213 |
nD1 |
101-210 |
110 |
e2g30A1 |
2G30 |
11.1.1 |
0.896 |
0.0 |
0.966 |
5.9|7.0|0 |
0.791 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
9 |
yes:out |
no |
PF11355 |
Q07X26 |
7-228 |
nD1 |
116-229 |
114 |
e5ek5B1 |
5EK5 |
11.1.1 |
0.927 |
0.812 |
0.969 |
7.0|7.8|0 |
0.849 |
1.056 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
yes:out |
no |
PF11355 |
D4ZF79 |
10-217 |
nD1 |
101-219 |
119 |
e5ek5B1 |
5EK5 |
11.1.1 |
0.943 |
0.893 |
0.968 |
7.3|7.6|0 |
0.858 |
1.102 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
yes:out |
no |
PF11358 |
A7HYK4 |
11-166 |
nD1 |
11-170 |
160 |
e3gwkC1 |
3GWK |
150.5.1 |
0.94 |
0.0 |
0.0 |
7.0|7.4|1 |
0.977 |
1.72 |
pymol |
na |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
ESAT-6 like |
ESAT-6 like |
4 |
3 |
no |
no |
PF11363 |
I2BC25 |
11-204 |
nD2 |
101-175 |
75 |
e2zrrA1 |
2ZRR |
633.2.1 |
0.874 |
0.383 |
0.416 |
4.5|4.5|1 |
0.835 |
0.765 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Carnobacteriocin B2 immunity protein |
Carnobacteriocin B2 immunity protein |
4 |
3 |
no |
no |
PF11363 |
A0A444HBT5 |
31-209 |
nD3 |
106-185 |
80 |
e7m5tA1 |
7M5T |
604.1.1 |
0.859 |
0.0 |
0.0 |
6.0|6.0|1 |
0.73 |
0.727 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
3 |
no |
no |
PF11368 |
R5DUB2 |
13-252 |
nD2 |
41-263 |
223 |
e1uurA3 |
1UUR |
603.2.1 |
0.854 |
0.0 |
0.0 |
10.4|10.4|1 |
0.958 |
1.26 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
STAT |
STAT |
6 |
0 |
no |
yes:4 |
PF11368 |
R7I6G4 |
13-252 |
nD3 |
171-263 |
93 |
e2c2aA1 |
2C2A |
605.1.1 |
0.909 |
0.0 |
0.0 |
6.4|7.2|0 |
0.904 |
1.274 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
no |
yes:1 |
PF11373 |
G2IKU7 |
5-89 |
nD1 |
16-90 |
75 |
e2i2xF1 |
2I2X |
4995.1.1 |
0.883 |
0.0 |
0.0 |
5.5|5.5|0 |
0.769 |
0.847 |
pymol |
more |
good_domain |
alpha arrays |
Methionine synthase domain-like |
Methionine synthase domain-like |
Methionine synthase domain-like |
3 |
0 |
no |
no |
PF11374 |
S3BX54 |
39-146 |
nD1 |
16-150,451-485,511-520 |
180 |
e4yuuQ21 |
4YUU |
601.18.1 |
0.936 |
0.0 |
0.0 |
9.5|9.5|1 |
0.929 |
1.406 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
7 |
3 |
no |
yes:4 |
PF11374 |
A0A3A2ZFD3 |
3-110 |
nD1 |
1-110,531-600 |
180 |
e7nkzB2 |
7NKZ |
5069.1.1 |
0.859 |
0.0 |
0.0 |
4.8|4.8|1 |
0.648 |
0.849 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
8 |
5 |
no |
yes:1 |
PF11383 |
Q87Q71 |
6-322 |
nD1 |
26-325 |
300 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.945 |
0.997 |
0.999 |
21.5|21.5|1 |
0.858 |
1.695 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
3 |
13 |
yes:out |
no |
PF11384 |
A0A4Y6QM72 |
20-70 |
nD1 |
1-73 |
73 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.931 |
0.0 |
0.0 |
8.2|8.2|1 |
0.977 |
0.993 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
yes:2 |
PF11385 |
A0A1W1XA71 |
3-148 |
nD1 |
1-150 |
150 |
e2myuA1 |
2MYU |
2007.2.2 |
0.939 |
0.599 |
0.687 |
6.2|6.3|1 |
0.769 |
1.049 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Flavoproteins/Phosphotyrosine protein phosphatases-like |
Phosphotyrosine protein phosphatases I-like |
6 |
4 |
no |
no |
PF11385 |
U2NP69 |
3-148 |
nD1 |
1-168 |
168 |
e2myuA1 |
2MYU |
2007.2.2 |
0.939 |
0.696 |
0.757 |
5.3|5.5|1 |
0.776 |
1.175 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Flavoproteins/Phosphotyrosine protein phosphatases-like |
Phosphotyrosine protein phosphatases I-like |
6 |
5 |
no |
no |
PF11385 |
A0A1V4IS21 |
3-148 |
nD1 |
1-150 |
150 |
e2myuA1 |
2MYU |
2007.2.2 |
0.933 |
0.587 |
0.667 |
6.1|6.2|1 |
0.757 |
1.049 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Flavoproteins/Phosphotyrosine protein phosphatases-like |
Phosphotyrosine protein phosphatases I-like |
6 |
4 |
no |
no |
PF11394 |
A8EQ92 |
1-154 |
nD1 |
1-255,281-290 |
265 |
e6qspB1 |
6QSP |
7581.1.1 |
0.884 |
0.0 |
0.0 |
8.1|8.1|1 |
0.801 |
1.472 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Thiolase-like |
Thiolase-like |
Thiolase-like |
10 |
8 |
no |
no |
PF11394 |
A0A3N7ZQ24 |
9-168 |
nD1 |
11-195,286-450 |
350 |
e1e5mA2 |
1E5M |
7581.1.1 |
0.925 |
0.0 |
0.672 |
7.6|10.5|1 |
0.927 |
1.944 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Thiolase-like |
Thiolase-like |
Thiolase-like |
12 |
13 |
no |
no |
PF11443 |
M1AUG4 |
54-595 |
nD1 |
66-165,201-395 |
295 |
e5oobF3 |
5OOB |
109.4.1 |
0.919 |
0.0 |
0.0 |
4.6|7.9|0 |
0.75 |
1.031 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF11443 |
D6RLI1 |
100-761 |
nD2 |
46-60,86-230,281-455,461-525 |
400 |
e4iulA1 |
4IUL |
109.4.1 |
0.862 |
0.0 |
0.0 |
4.7|6.6|0 |
0.661 |
1.399 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
14 |
3 |
no |
no |
PF11445 |
Q1LD34 |
13-210 |
nD1 |
6-70 |
65 |
e6rjwA1 |
6RJW |
632.18.1 |
0.853 |
0.0 |
0.0 |
8.3|8.3|1 |
0.823 |
0.802 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
hypothetical protein PA2901 |
hypothetical protein PA2901 |
3 |
0 |
no |
no |
PF11454 |
Q5QVT5 |
21-160 |
nD1 |
21-165 |
145 |
e2n8xA1 |
2N8X |
7503.1.1 |
0.861 |
0.564 |
0.642 |
3.8|6.7|1 |
0.781 |
0.96 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
3 |
6 |
yes:out |
no |
PF11500 |
K9FY15 |
151-291 |
nD1 |
206-330,566-575 |
135 |
e4iloB5 |
4ILO |
3755.3.1 |
0.875 |
0.972 |
0.978 |
7.6|9.7|0 |
0.69 |
0.785 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF11557 |
A0A0Q2RUC9 |
1-294 |
nD2 |
1-80,96-130,156-290 |
250 |
e3sljA1 |
3SLJ |
5084.3.1 |
0.909 |
0.931 |
0.959 |
16.9|16.9|1 |
0.751 |
0.836 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Autotransporter |
Autotransporter |
4 |
12 |
no |
no |
PF11557 |
A0A0F4NNS4 |
1-305 |
nD1 |
11-270,286-300 |
275 |
e3sljA1 |
3SLJ |
5084.3.1 |
0.895 |
0.907 |
0.953 |
16.8|16.8|1 |
0.748 |
0.92 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Autotransporter |
Autotransporter |
5 |
13 |
no |
no |
PF11659 |
A0A0F6TSE6 |
48-186 |
nD1 |
26-190 |
165 |
e3wjtA1 |
3WJT |
71.1.1 |
0.923 |
0.989 |
0.99 |
10.4|10.4|1 |
0.788 |
0.868 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
13 |
yes:out |
no |
PF11659 |
J2L7N6 |
47-183 |
nD1 |
41-185 |
145 |
e3wjtA1 |
3WJT |
71.1.1 |
0.93 |
0.99 |
0.991 |
9.8|9.8|1 |
0.753 |
0.763 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
10 |
yes:out |
no |
PF11659 |
A0A2S2CP63 |
32-173 |
nD1 |
12-170 |
159 |
e3wjtA1 |
3WJT |
71.1.1 |
0.91 |
0.98 |
0.977 |
10.5|10.5|1 |
0.727 |
0.837 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
11 |
no |
no |
PF11672 |
A0A077QKQ3 |
23-139 |
nD1 |
6-140 |
135 |
e6hpcA2 |
6HPC |
101.1.4 |
0.877 |
0.0 |
0.393 |
6.3|6.3|1 |
0.863 |
1.731 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
4 |
4 |
no |
no |
PF11672 |
A0A6G4MJD3 |
24-139 |
nD1 |
6-140 |
135 |
e2mqkA1 |
2MQK |
101.1.4 |
0.919 |
0.0 |
0.383 |
5.3|6.3|1 |
0.881 |
1.731 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
4 |
4 |
no |
no |
PF11677 |
L0B3E4 |
12-270 |
nD1 |
26-245 |
220 |
e6m20B1 |
6M20 |
5050.1.1 |
0.858 |
0.895 |
0.479 |
3.6|8.1|0 |
0.539 |
0.998 |
pymol |
more |
good_domain |
alpha complex topology |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
Major facilitator superfamily (MFS) general substrate transporter |
7 |
0 |
no |
yes:6 |
PF11677 |
U6KNH5 |
10-276 |
nD1 |
21-255 |
235 |
e6klsE1 |
6KLS |
5069.1.1 |
0.892 |
0.0 |
0.0 |
7.1|8.1|0 |
0.807 |
1.108 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
7 |
1 |
no |
yes:6 |
PF11678 |
Q9I6M9 |
385-685 |
nD2 |
31-65,81-300,336-500,586-630,656-710 |
520 |
e2zysA2 |
2ZYS |
7579.1.1 |
0.914 |
0.947 |
0.974 |
9.6|11.5|1 |
0.937 |
1.825 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
11 |
19 |
no |
no |
PF11678 |
Q87V84 |
379-652 |
nD4 |
486-565 |
80 |
e1vqoS1 |
1VQO |
304.109.1 |
0.876 |
0.0 |
0.0 |
4.2|4.7|1 |
0.726 |
0.661 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ribosomal proteins S24e, L23 and L15e |
Ribosomal proteins S24e, L23 and L15e |
2 |
4 |
no |
no |
PF11678 |
A0A5C4NSF9 |
398-727 |
nD1 |
31-299,336-365,396-459,482-535,626-750 |
542 |
e3fleA1 |
3FLE |
7579.1.1 |
0.921 |
0.972 |
0.974 |
10.0|11.5|1 |
0.909 |
1.902 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
11 |
19 |
no |
no |
PF11679 |
E1VKM1 |
1-214 |
nD1 |
1-85,166-215 |
135 |
e1n9wA1 |
1N9W |
2.1.1 |
0.944 |
0.0 |
0.0 |
2.8|3.7|1 |
0.875 |
1.298 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
7 |
no |
no |
PF11679 |
Q5P5B7 |
2-199 |
nD2 |
146-200 |
55 |
e4nnaA5 |
4NNA |
3853.1.1 |
0.87 |
0.0 |
0.0 |
4.0|4.6|1 |
0.905 |
1.264 |
pymol |
more |
good_domain |
a+b two layers |
Oxalate Biosynthetic Component A (ObcA) insertion domains |
Oxalate Biosynthetic Component A (ObcA) insertion domains |
Oxalate Biosynthetic Component A (ObcA) insertion domains |
2 |
2 |
no |
no |
PF11683 |
A0A7U6DUH9 |
1-127 |
nD1 |
6-95 |
90 |
e3kdwA1 |
3KDW |
3711.1.1 |
0.886 |
0.0 |
0.0 |
6.8|7.1|0 |
0.412 |
0.811 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
3 |
0 |
no |
yes:2 |
PF11683 |
A0A7X3D7V8 |
2-128 |
nD1 |
6-95 |
90 |
e3kdwA1 |
3KDW |
3711.1.1 |
0.871 |
0.0 |
0.0 |
6.9|7.2|0 |
0.409 |
0.811 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
3 |
0 |
no |
yes:2 |
PF11743 |
A0A385MTB4 |
7-97 |
nD1 |
1-100 |
100 |
e4exrA4 |
4EXR |
243.3.1 |
0.9 |
0.0 |
0.246 |
5.2|6.4|0 |
0.947 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
yes:in |
no |
PF11749 |
A0A542LPY6 |
7-144 |
nD1 |
1-134 |
134 |
e7bprA2 |
7BPR |
382.1.1 |
0.908 |
0.0 |
0.0 |
2.6|2.6|1 |
0.854 |
1.787 |
pymol |
more |
good_domain |
few secondary structure elements |
Snake toxin-like |
Snake toxin-like |
Snake toxin-like |
3 |
7 |
no |
no |
PF11763 |
Q9P7Q2 |
189-325 |
nD1 |
196-220,266-305 |
65 |
e3bidH1 |
3BID |
4325.1.1 |
0.889 |
0.694 |
0.649 |
0.0|5.8|0 |
0.546 |
1.121 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
0 |
6 |
yes:out |
no |
PF11763 |
Q874R4 |
848-970 |
nD5 |
906-955 |
50 |
e2k7iA1 |
2K7I |
4325.1.1 |
0.863 |
0.132 |
0.117 |
0.0|12.9|0 |
0.355 |
0.862 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
0 |
4 |
yes:out |
no |
PF11763 |
Q9P5N1 |
232-357 |
nD1 |
296-335 |
40 |
e2k7iA1 |
2K7I |
4325.1.1 |
0.888 |
0.657 |
0.627 |
0.0|2.6|0 |
0.507 |
0.69 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
0 |
4 |
yes:out |
no |
PF11773 |
I0SXP0 |
2-76 |
nD1 |
1-79 |
79 |
e5bw0F1 |
5BW0 |
274.1.1 |
0.876 |
0.0 |
0.561 |
4.0|5.0|1 |
0.722 |
0.642 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
1 |
4 |
yes:in |
no |
PF11777 |
A0A4S2ATF2 |
4-139 |
nD1 |
26-265 |
240 |
e2vdfA1 |
2VDF |
5084.2.1 |
0.876 |
0.843 |
0.707 |
20.4|20.4|1 |
0.909 |
0.825 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPT-like |
OMPT-like |
0 |
11 |
yes:out |
no |
PF11782 |
A0A2N7LGX8 |
1-85 |
nD1 |
1-55 |
55 |
e2konA1 |
2KON |
4152.2.1 |
0.937 |
0.742 |
0.778 |
2.9|2.9|1 |
0.573 |
0.671 |
pymol |
more |
good_domain |
a+b two layers |
Shew3726-like |
Uncharacterized protein CV_2116 |
Uncharacterized protein CV_2116 |
1 |
4 |
no |
no |
PF11782 |
A0A0J1GQS1 |
1-89 |
nD1 |
1-55 |
55 |
e2konA1 |
2KON |
4152.2.1 |
0.863 |
0.747 |
0.665 |
3.2|3.9|0 |
0.585 |
0.671 |
pymol |
more |
good_domain |
a+b two layers |
Shew3726-like |
Uncharacterized protein CV_2116 |
Uncharacterized protein CV_2116 |
1 |
4 |
no |
no |
PF11782 |
A0A1Y6MDA1 |
1-90 |
nD1 |
1-55 |
55 |
e2konA1 |
2KON |
4152.2.1 |
0.937 |
0.748 |
0.665 |
2.7|2.7|1 |
0.573 |
0.671 |
pymol |
more |
good_domain |
a+b two layers |
Shew3726-like |
Uncharacterized protein CV_2116 |
Uncharacterized protein CV_2116 |
1 |
4 |
no |
no |
PF11796 |
Q5L375 |
34-232 |
nD2 |
96-220 |
125 |
e2zbkA1 |
2ZBK |
101.21.1 |
0.882 |
0.997 |
0.0 |
3.4|3.5|0 |
0.693 |
1.381 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH domain in DNA topoisomerase IV alpha subunit |
HTH domain in DNA topoisomerase IV alpha subunit |
5 |
1 |
no |
no |
PF11796 |
K0JS86 |
37-239 |
nD1 |
16-100 |
85 |
e2cw7A3 |
2CW7 |
242.1.1 |
0.869 |
0.0 |
0.0 |
2.1|2.1|1 |
0.678 |
0.637 |
pymol |
more |
good_domain |
a+b two layers |
Homing endonucleases-like |
Homing endonucleases |
Homing endonucleases |
4 |
2 |
no |
no |
PF11804 |
A0A1I9XW93 |
9-101 |
nD1 |
6-100 |
95 |
e7ogkA6 |
7OGK |
101.11.1 |
0.901 |
0.0 |
0.0 |
6.5|6.5|1 |
0.825 |
1.067 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
3 |
0 |
yes:in |
yes:1 |
PF11804 |
A0A853SE39 |
9-101 |
nD1 |
6-100 |
95 |
e7ogkA6 |
7OGK |
101.11.1 |
0.9 |
0.0 |
0.0 |
6.6|6.6|1 |
0.825 |
1.067 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
3 |
0 |
yes:in |
yes:1 |
PF11805 |
Q3AHL0 |
3-334 |
nD2 |
1-75,246-335 |
165 |
e3jy6A1 |
3JY6 |
2007.1.2 |
0.929 |
0.0 |
0.4 |
6.2|7.0|0 |
0.849 |
1.154 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Periplasmic binding protein-like I |
4 |
8 |
no |
no |
PF11805 |
A0A0H4BBG8 |
1-331 |
nD2 |
1-70,241-340 |
170 |
e3bblA1 |
3BBL |
2007.1.2 |
0.949 |
0.0 |
0.438 |
5.8|7.4|1 |
0.841 |
1.189 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Periplasmic binding protein-like I |
7 |
7 |
no |
no |
PF11807 |
A6QY96 |
39-263 |
nD1 |
41-70,76-100,122-145,171-264 |
173 |
e2p22C1 |
2P22 |
192.15.1 |
0.935 |
0.0 |
0.0 |
2.3|2.3|1 |
0.582 |
1.609 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
6 |
5 |
no |
yes:1 |
PF11808 |
A0A4U0PWU6 |
3-88 |
nD2 |
26-90 |
65 |
e4i5sB4 |
4I5S |
4168.1.1 |
0.87 |
1.0 |
0.391 |
0.0|4.8|0 |
0.962 |
1.121 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HAMP domain |
HAMP domain |
HAMP domain |
2 |
0 |
no |
yes:1 |
PF11811 |
Q13QM7 |
63-155 |
nD1 |
76-155 |
80 |
e4b6dA1 |
4B6D |
376.1.2 |
0.94 |
0.0 |
0.0 |
4.0|4.0|1 |
0.849 |
1.29 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
Cysteine-rich domain |
1 |
6 |
no |
no |
PF11811 |
Q141A2 |
208-299 |
nD1 |
221-300 |
80 |
e4b6dA1 |
4B6D |
376.1.2 |
0.94 |
0.0 |
0.0 |
2.3|2.5|0 |
0.863 |
1.29 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
Cysteine-rich domain |
1 |
6 |
no |
no |
PF11824 |
A0A1V5AJ92 |
137-410 |
nD3 |
136-155,286-415 |
150 |
e4aw7A3 |
4AW7 |
10.1.2 |
0.947 |
0.0 |
0.0 |
10.0|10.0|1 |
0.927 |
0.955 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
9 |
no |
no |
PF11827 |
A0A2G5L8N2 |
16-97 |
nD1 |
1-145 |
145 |
e6r6oA1 |
6R6O |
601.2.1 |
0.924 |
0.44 |
0.323 |
9.6|9.6|1 |
0.906 |
1.124 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Cytochromes |
Cytochromes |
4 |
3 |
no |
no |
PF11827 |
A0A2G6CQ54 |
3-86 |
nD1 |
1-130 |
130 |
e2j8wB1 |
2J8W |
601.2.1 |
0.883 |
0.233 |
0.431 |
6.8|6.8|1 |
0.682 |
1.008 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Cytochromes |
Cytochromes |
4 |
2 |
no |
no |
PF11828 |
E6WSI4 |
1-223 |
nD1 |
11-175,196-225 |
195 |
e4uosA1 |
4UOS |
601.19.1 |
0.856 |
0.0 |
0.0 |
8.1|8.1|1 |
0.722 |
0.809 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
7 |
0 |
no |
no |
PF11828 |
K0C7X1 |
8-246 |
nD1 |
21-245 |
225 |
e4uosA1 |
4UOS |
601.19.1 |
0.91 |
0.0 |
0.0 |
7.9|7.9|1 |
0.793 |
0.934 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
6 |
0 |
no |
no |
PF11828 |
Q0K3V6 |
1-245 |
nD2 |
16-25,71-245 |
185 |
e4uosA1 |
4UOS |
601.19.1 |
0.918 |
0.0 |
0.0 |
8.8|8.8|1 |
0.857 |
0.768 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
5 |
0 |
no |
no |
PF11832 |
K7WDE0 |
12-546 |
nD2 |
36-65,96-290 |
225 |
e3k8gA1 |
3K8G |
881.3.1 |
0.924 |
0.877 |
0.9 |
10.0|10.0|1 |
0.645 |
0.889 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Outer membrane-associated lipoprotein TP0453 |
Outer membrane-associated lipoprotein TP0453 |
6 |
11 |
no |
yes:out |
PF11832 |
K9Z6X5 |
18-539 |
nD1 |
41-280 |
240 |
e3k8gA1 |
3K8G |
881.3.1 |
0.9 |
0.75 |
0.774 |
8.0|8.0|1 |
0.637 |
0.949 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Outer membrane-associated lipoprotein TP0453 |
Outer membrane-associated lipoprotein TP0453 |
8 |
11 |
no |
yes:out |
PF11832 |
A5GWB8 |
12-513 |
nD1 |
46-70,91-300,446-518 |
308 |
e3k8gA1 |
3K8G |
881.3.1 |
0.867 |
0.0 |
0.0 |
10.3|10.3|1 |
0.773 |
1.217 |
pymol |
na |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Outer membrane-associated lipoprotein TP0453 |
Outer membrane-associated lipoprotein TP0453 |
9 |
14 |
no |
yes:out |
PF11833 |
I1I725 |
84-264 |
nD2 |
161-265 |
105 |
e6zx9C2 |
6ZX9 |
3788.1.1 |
0.876 |
0.0 |
0.0 |
4.7|4.7|1 |
0.805 |
1.18 |
pymol |
more |
good_domain |
alpha bundles |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
4 |
1 |
no |
yes:4 |
PF11850 |
A0A0F6U787 |
22-441 |
nD2 |
16-30,126-140,266-440 |
205 |
e5ikuA1 |
5IKU |
10.1.2 |
0.893 |
0.0 |
0.224 |
6.4|6.4|1 |
0.912 |
1.306 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
14 |
no |
no |
PF11850 |
A0A1B1TS94 |
20-439 |
nD2 |
11-30,261-305,321-440 |
185 |
e4en8B2 |
4EN8 |
10.1.2 |
0.87 |
0.0 |
0.0 |
5.9|6.0|0 |
0.921 |
1.178 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
11 |
no |
no |
PF11853 |
Q39R20 |
123-538 |
nD2 |
71-538 |
468 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.931 |
0.986 |
0.992 |
20.6|22.5|1 |
0.905 |
1.272 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
20 |
yes:out |
no |
PF11853 |
A0A5A9XHU2 |
157-560 |
nD3 |
51-75,151-560 |
435 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.89 |
0.984 |
0.987 |
19.8|22.7|1 |
0.898 |
1.182 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
21 |
yes:out |
no |
PF11853 |
A0A6V8MNR9 |
146-550 |
nD3 |
51-75,141-550 |
435 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.906 |
0.987 |
0.991 |
20.2|22.1|1 |
0.902 |
1.182 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
19 |
yes:out |
no |
PF11856 |
Q7NJB7 |
408-917 |
nD3 |
456-535,571-630,656-705 |
190 |
e2x3vA1 |
2X3V |
4177.1.1 |
0.876 |
0.0 |
0.0 |
6.9|6.9|1 |
0.401 |
0.762 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
7 |
0 |
no |
yes:out |
PF11856 |
A1B5A8 |
333-805 |
nD2 |
371-530,556-625 |
230 |
e6xssD1 |
6XSS |
109.3.1 |
0.889 |
0.0 |
0.0 |
5.8|6.2|0 |
0.422 |
1.156 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
2 |
no |
yes:out |
PF11859 |
G4QKC2 |
1-232 |
nD2 |
106-234 |
129 |
e6jauA2 |
6JAU |
881.4.1 |
0.913 |
0.938 |
0.98 |
7.5|8.3|0 |
0.88 |
1.217 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
C-terminal domain in sigma-E factor regulatory protein rseB |
C-terminal domain in sigma-E factor regulatory protein rseB |
4 |
7 |
no |
yes:out |
PF11859 |
Q6LTK6 |
1-233 |
nD2 |
111-235 |
125 |
e6jauA2 |
6JAU |
881.4.1 |
0.915 |
0.928 |
0.979 |
7.9|8.2|0 |
0.901 |
1.179 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
C-terminal domain in sigma-E factor regulatory protein rseB |
C-terminal domain in sigma-E factor regulatory protein rseB |
3 |
8 |
no |
yes:out |
PF11866 |
A0A4P7ZX72 |
3-215 |
nD1 |
6-215 |
210 |
e3bk5A1 |
3BK5 |
71.1.1 |
0.935 |
0.953 |
0.913 |
7.5|7.9|1 |
0.673 |
1.105 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
14 |
no |
no |
PF11867 |
E4TFM4 |
742-1069 |
nD4 |
751-870 |
120 |
e3evyB1 |
3EVY |
3558.1.1 |
0.898 |
0.337 |
0.0 |
6.6|7.0|0 |
0.867 |
0.964 |
pymol |
more |
good_domain |
alpha arrays |
HSDR subunit helical domain |
HSDR subunit helical domain |
HSDR subunit helical domain |
5 |
1 |
no |
no |
PF11867 |
E4TFM4 |
742-1069 |
nD7 |
976-1070 |
95 |
e6ob1C1 |
6OB1 |
101.1.2 |
0.862 |
0.0 |
0.0 |
4.8|4.8|1 |
0.806 |
1.0 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
0 |
no |
no |
PF11869 |
A0A0C3R101 |
1-73 |
nD1 |
1-74 |
74 |
e3fssA2 |
3FSS |
220.1.1 |
0.871 |
0.0 |
0.0 |
6.4|7.4|1 |
0.859 |
0.607 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
no |
PF11869 |
A0A444JNP6 |
1-75 |
nD1 |
1-75 |
75 |
e4iapB2 |
4IAP |
220.1.1 |
0.878 |
0.0 |
0.205 |
5.6|6.7|1 |
0.857 |
0.615 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
no |
PF11869 |
A0A2S7X6W6 |
1-75 |
nD1 |
1-78 |
78 |
e4iapB2 |
4IAP |
220.1.1 |
0.876 |
0.0 |
0.0 |
5.6|7.1|1 |
0.857 |
0.639 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
no |
PF11871 |
A0A2N0V490 |
2-131 |
nD1 |
1-60 |
60 |
e1g8lA2 |
1G8L |
275.1.1 |
0.87 |
0.0 |
0.955 |
4.6|4.7|1 |
0.833 |
0.723 |
pymol |
more |
good_domain |
a+b two layers |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
2 |
3 |
no |
no |
PF11871 |
A0A177MEY2 |
2-132 |
nD1 |
1-70 |
70 |
e6j9eC10 |
6J9E |
275.1.1 |
0.872 |
0.0 |
0.948 |
4.2|5.5|1 |
0.881 |
0.843 |
pymol |
more |
good_domain |
a+b two layers |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
2 |
4 |
no |
no |
PF11871 |
A0A177LRI4 |
2-132 |
nD1 |
1-75 |
75 |
e1g8lA2 |
1G8L |
275.1.1 |
0.869 |
0.0 |
0.943 |
4.7|4.9|1 |
0.833 |
0.904 |
pymol |
more |
good_domain |
a+b two layers |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase |
3 |
4 |
no |
no |
PF11872 |
A0A7X7NH28 |
2-104 |
nD1 |
6-105 |
100 |
e6r2gA1 |
6R2G |
3567.1.1 |
0.898 |
0.0 |
0.0 |
5.2|5.6|0 |
0.833 |
1.695 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
3 |
0 |
no |
yes:3 |
PF11874 |
Q92WP8 |
635-813 |
nD5 |
691-785 |
95 |
e2eaqA1 |
2EAQ |
7.1.1 |
0.947 |
0.349 |
0.356 |
4.6|4.8|1 |
0.626 |
0.95 |
pymol |
more |
good_domain |
beta barrels |
PDZ domain |
PDZ domain |
PDZ domain |
2 |
6 |
no |
yes:out |
PF11875 |
E9GBR0 |
407-545 |
nD2 |
6-85,426-545 |
200 |
e6psiA3 |
6PSI |
650.1.1 |
0.941 |
0.975 |
0.974 |
7.3|11.7|1 |
0.938 |
2.516 |
pymol |
more |
good_domain |
alpha bundles |
Chaperone J-domain |
Chaperone J-domain |
Chaperone J-domain |
4 |
6 |
no |
yes:out |
PF11880 |
A0A1F4K3D4 |
349-396 |
nD1 |
6-60,96-395 |
355 |
e3kwlA3 |
3KWL |
2007.1.5 |
0.927 |
0.999 |
0.993 |
4.9|7.7|1 |
0.778 |
2.958 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
ATC-like |
12 |
10 |
yes:in |
no |
PF11885 |
A0A0D2XNF2 |
220-758 |
nD2 |
156-278,351-540,581-770 |
503 |
e4cj8H1 |
4CJ8 |
7516.1.1 |
0.926 |
0.0 |
0.388 |
7.5|9.1|1 |
0.867 |
1.898 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
13 |
15 |
yes:out |
no |
PF11885 |
C0NDS6 |
160-626 |
nD1 |
96-390,453-540,566-630 |
448 |
e5a07A1 |
5A07 |
7516.1.1 |
0.945 |
0.352 |
0.415 |
6.0|8.5|1 |
0.829 |
1.691 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
13 |
13 |
yes:out |
no |
PF11886 |
M1D0Y4 |
522-787 |
nD3 |
406-440,526-800 |
310 |
e6wimA1 |
6WIM |
5084.5.1 |
0.915 |
0.0 |
0.0 |
12.5|13.8|0 |
0.771 |
0.842 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
14 |
yes:out |
yes:1 |
PF11886 |
M4DPV5 |
618-885 |
nD3 |
521-540,616-890 |
295 |
e7cp9I1 |
7CP9 |
5084.5.1 |
0.947 |
0.0 |
0.0 |
13.5|14.8|0 |
0.794 |
0.802 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
14 |
no |
no |
PF11886 |
A0A7I8IYG7 |
447-701 |
nD4 |
316-360,476-680 |
250 |
e6wimA1 |
6WIM |
5084.5.1 |
0.9 |
0.0 |
0.0 |
13.0|13.0|1 |
0.744 |
0.679 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
1 |
14 |
no |
yes:out |
PF11902 |
C1D6E6 |
6-425 |
nD2 |
196-365 |
170 |
e5j1gB2 |
5J1G |
604.1.1 |
0.946 |
0.0 |
0.0 |
11.4|12.1|0 |
0.984 |
1.545 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
1 |
no |
yes:out |
PF11902 |
B9JNJ3 |
20-429 |
nD2 |
211-285,306-345 |
115 |
e4p1nB1 |
4P1N |
604.12.1 |
0.9 |
0.0 |
0.0 |
10.4|11.3|0 |
0.961 |
1.329 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
1 |
no |
yes:out |
PF11904 |
I1KZT0 |
197-557 |
nD2 |
161-250,276-310,416-490,546-560 |
215 |
e2zf4A1 |
2ZF4 |
71.1.1 |
0.906 |
0.0 |
0.0 |
9.1|9.5|1 |
0.862 |
1.132 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
12 |
no |
no |
PF11904 |
B4N5Y5 |
157-500 |
nD2 |
116-205,231-275,391-500 |
245 |
e2yzyA1 |
2YZY |
71.1.1 |
0.944 |
0.0 |
0.316 |
8.3|8.3|1 |
0.871 |
1.289 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
4 |
15 |
no |
no |
PF11904 |
Q94CF4 |
195-597 |
nD2 |
156-250,271-310,446-525,586-600 |
230 |
e2zf4A1 |
2ZF4 |
71.1.1 |
0.93 |
0.0 |
0.0 |
9.1|9.8|1 |
0.86 |
1.211 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
14 |
no |
no |
PF11913 |
A1CAT2 |
65-313 |
nD1 |
6-40,61-205,241-318 |
258 |
e6wmmA1 |
6WMM |
7516.1.1 |
0.851 |
0.0 |
0.0 |
6.2|7.8|1 |
0.459 |
0.974 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
10 |
5 |
yes:in |
no |
PF11915 |
A0A1B8AQF6 |
78-169 |
nD1 |
6-40,76-170,466-500 |
165 |
e2hfiA1 |
2HFI |
601.26.1 |
0.877 |
0.0 |
0.0 |
9.2|9.2|1 |
0.776 |
1.375 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
YppE-like |
YppE-like |
5 |
2 |
no |
yes:3 |
PF11916 |
Q16Q69 |
449-631 |
nD3 |
546-680 |
135 |
e1mhqA1 |
1MHQ |
109.4.1 |
0.925 |
0.0 |
0.991 |
4.2|6.6|1 |
0.773 |
0.472 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
no |
PF11917 |
A4DA40 |
39-455 |
nD2 |
291-400 |
110 |
e5vo5A1 |
5VO5 |
3291.1.1 |
0.93 |
0.0 |
0.0 |
5.7|5.7|1 |
0.713 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
4 |
0 |
no |
no |
PF11920 |
Q5P5E1 |
11-284 |
nD2 |
156-275 |
120 |
e3czgA3 |
3CZG |
12.1.1 |
0.944 |
0.0 |
0.0 |
3.3|4.6|0 |
0.955 |
1.333 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
5 |
yes:out |
no |
PF11920 |
Q1LKU9 |
7-284 |
nD2 |
156-275 |
120 |
e5ek5B1 |
5EK5 |
11.1.1 |
0.888 |
0.0 |
0.224 |
3.2|4.5|1 |
0.724 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
5 |
yes:out |
no |
PF11920 |
A1TJH3 |
15-299 |
nD2 |
171-290 |
120 |
e3czgA3 |
3CZG |
12.1.1 |
0.942 |
0.0 |
0.0 |
3.3|4.4|0 |
0.955 |
1.333 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
5 |
yes:out |
no |
PF11925 |
Q13WM6 |
8-350 |
nD1 |
1-145,166-350 |
330 |
e4amtA1 |
4AMT |
1.1.1 |
0.897 |
0.963 |
0.998 |
18.4|20.9|1 |
0.812 |
1.854 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
acid protease |
2 |
20 |
no |
no |
PF11925 |
R4WXU1 |
2-340 |
nD1 |
1-340 |
340 |
e6r5hA1 |
6R5H |
1.1.1 |
0.919 |
0.928 |
0.998 |
19.8|20.2|1 |
0.784 |
1.91 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
acid protease |
3 |
21 |
no |
no |
PF11925 |
A0A226X548 |
2-354 |
nD1 |
1-354 |
354 |
e6r5hA1 |
6R5H |
1.1.1 |
0.925 |
0.947 |
0.998 |
21.5|22.1|1 |
0.811 |
1.989 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
acid protease |
5 |
22 |
no |
no |
PF11944 |
A1SSV2 |
1-125 |
nD1 |
1-95 |
95 |
e7nkyQ3 |
7NKY |
220.1.1 |
0.852 |
0.0 |
0.452 |
4.3|5.8|1 |
0.521 |
0.779 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
4 |
no |
no |
PF11944 |
B5F9X9 |
1-126 |
nD1 |
1-90 |
90 |
e7nkyQ3 |
7NKY |
220.1.1 |
0.852 |
0.0 |
0.468 |
4.7|5.4|1 |
0.556 |
0.738 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
4 |
no |
no |
PF11944 |
Q5E3D6 |
1-126 |
nD1 |
1-90 |
90 |
e3b77A2 |
3B77 |
220.1.1 |
0.856 |
0.0 |
0.468 |
3.6|5.5|1 |
0.496 |
0.738 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
4 |
no |
no |
PF11947 |
A0ZC71 |
6-151 |
nD1 |
51-155 |
105 |
e2bl2F2 |
2BL2 |
5041.1.1 |
0.923 |
0.0 |
0.0 |
4.3|4.6|0 |
0.936 |
1.346 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
3 |
0 |
no |
yes:2 |
PF11949 |
M4U5A1 |
6-597 |
nD1 |
26-90,121-570 |
515 |
e3azpA2 |
3AZP |
5.1.4 |
0.877 |
0.0 |
0.0 |
17.6|21.3|1 |
0.936 |
1.435 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
9 |
31 |
yes:out |
yes:out |
PF11950 |
Q5L2Q4 |
5-90 |
nD1 |
16-75 |
60 |
e6bp6A1 |
6BP6 |
295.1.1 |
0.931 |
0.0 |
0.414 |
3.5|4.9|1 |
0.705 |
0.492 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
1 |
3 |
no |
no |
PF11955 |
A0A3Q7G8H5 |
77-397 |
nD1 |
66-260,291-395 |
300 |
e2nyxB1 |
2NYX |
101.1.2 |
0.939 |
0.0 |
0.211 |
6.3|8.3|1 |
0.856 |
3.158 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
11 |
9 |
no |
no |
PF11961 |
A0A5D2SKE2 |
26-82 |
nD1 |
21-235 |
215 |
e6qv7A2 |
6QV7 |
601.33.1 |
0.869 |
0.0 |
0.0 |
6.4|6.8|1 |
0.754 |
1.581 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
7 |
2 |
no |
no |
PF11966 |
T0SIZ2 |
57-201 |
nD1 |
56-200 |
145 |
e4l3aA4 |
4L3A |
3414.1.1 |
0.875 |
0.0 |
0.0 |
2.7|2.9|1 |
0.935 |
1.747 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
4 |
6 |
yes:out |
no |
PF11966 |
A0A443LGD4 |
56-201 |
nD1 |
53-110,133-200 |
126 |
e6sx1A1 |
6SX1 |
3414.1.1 |
0.906 |
0.0 |
0.0 |
3.5|3.5|1 |
0.808 |
1.518 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
4 |
6 |
yes:out |
no |
PF11966 |
T0W0E2 |
184-323 |
nD2 |
186-325 |
140 |
e4l3aA4 |
4L3A |
3414.1.1 |
0.922 |
0.0 |
0.0 |
2.6|3.8|0 |
0.914 |
1.687 |
pymol |
more |
good_domain |
beta sandwiches |
A putative surface protein |
A putative surface protein |
A putative surface protein |
3 |
5 |
yes:out |
no |
PF11984 |
D7DNX2 |
11-216 |
nD1 |
41-225 |
185 |
e6xrrB1 |
6XRR |
881.1.1 |
0.868 |
0.0 |
0.0 |
7.2|7.9|0 |
0.878 |
1.125 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
5 |
8 |
yes:out |
no |
PF11984 |
Q28JC5 |
327-531 |
nD3 |
346-534 |
189 |
e4esqA1 |
4ESQ |
881.1.1 |
0.9 |
0.0 |
0.0 |
6.5|8.4|0 |
0.818 |
1.149 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
4 |
8 |
no |
yes:out |
PF11985 |
Q2W6G0 |
7-187 |
nD1 |
6-80 |
75 |
e1e3oC1 |
1E3O |
101.1.1 |
0.936 |
0.0 |
0.967 |
6.1|7.9|0 |
0.961 |
1.027 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF11995 |
K7LEM5 |
778-943 |
nD3 |
776-925 |
150 |
e1u00A2 |
1U00 |
632.7.1 |
0.902 |
0.0 |
0.0 |
5.3|5.3|1 |
0.579 |
1.442 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
7 |
0 |
no |
no |
PF12005 |
D1BWZ1 |
4-120 |
nD1 |
21-60 |
40 |
e2j87D6 |
2J87 |
377.1.1 |
0.886 |
0.133 |
0.205 |
0.0|0.0|1 |
0.604 |
0.8 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
2 |
2 |
no |
no |
PF12005 |
W5TQ67 |
1-126 |
nD1 |
1-59 |
59 |
e1w4rH2 |
1W4R |
377.1.1 |
0.864 |
0.0 |
0.164 |
2.1|2.1|1 |
0.864 |
1.18 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
4 |
no |
no |
PF12013 |
A0A7C8H9V0 |
21-116 |
nD1 |
16-85 |
70 |
e2lt7A3 |
2LT7 |
386.1.1 |
0.948 |
0.0 |
0.922 |
2.3|3.8|0 |
0.909 |
2.121 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
2 |
3 |
no |
no |
PF12015 |
A0A1D8PQK0 |
20-194 |
nD1 |
21-185,721-745 |
190 |
e3brwB1 |
3BRW |
4026.1.1 |
0.908 |
0.0 |
0.0 |
9.5|9.5|1 |
0.796 |
1.25 |
pymol |
more |
good_domain |
a+b three layers |
a+b domain in Rap/Ran-GAP (Pfam 02145) |
a+b domain in Rap/Ran-GAP (Pfam 02145) |
a+b domain in Rap/Ran-GAP (Pfam 02145) |
5 |
6 |
no |
no |
PF12018 |
U3IPW8 |
267-543 |
nD1 |
66-435,526-540 |
385 |
e4wpcB1 |
4WPC |
4177.1.1 |
0.894 |
0.0 |
0.0 |
7.8|7.8|1 |
0.702 |
1.543 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
13 |
0 |
no |
no |
PF12018 |
Q95JX1 |
133-394 |
nD1 |
1-295 |
295 |
e1uruA1 |
1URU |
4177.1.1 |
0.916 |
0.0 |
0.0 |
7.5|9.0|1 |
0.795 |
1.182 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
10 |
0 |
no |
no |
PF12025 |
A0A6N3A8N8 |
5-72 |
nD1 |
6-70 |
65 |
e4hfqA1 |
4HFQ |
6132.1.1 |
0.875 |
0.0 |
0.0 |
5.1|5.2|0 |
0.954 |
1.024 |
pymol |
more |
good_domain |
alpha bundles |
Nudix hydrolase N-terminal dimerization domain |
Nudix hydrolase N-terminal dimerization domain |
Nudix hydrolase N-terminal dimerization domain |
3 |
0 |
no |
no |
PF12028 |
W5TM79 |
151-311 |
nD1 |
186-310 |
125 |
e4luqD1 |
4LUQ |
881.1.1 |
0.896 |
0.0 |
0.0 |
7.0|7.0|1 |
0.831 |
0.76 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
7 |
no |
yes:out |
PF12028 |
V9XBD4 |
40-198 |
nD1 |
72-190 |
119 |
e4luqD1 |
4LUQ |
881.1.1 |
0.887 |
0.0 |
0.0 |
6.8|6.8|1 |
0.818 |
0.723 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
7 |
no |
yes:out |
PF12029 |
D6Y2H0 |
378-829 |
nD6 |
716-830 |
115 |
e4hyzB1 |
4HYZ |
243.1.1 |
0.915 |
0.0 |
0.0 |
5.4|5.4|1 |
0.772 |
0.865 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
NTF2-like |
NTF2-like |
5 |
4 |
no |
no |
PF12046 |
A0A4Y3FUN8 |
3-170 |
nD2 |
26-75,131-175 |
95 |
e5wi2B1 |
5WI2 |
331.4.1 |
0.905 |
0.322 |
0.286 |
8.0|8.0|1 |
0.891 |
0.798 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
3 |
5 |
no |
yes:out |
PF12046 |
A0A076HH96 |
5-168 |
nD2 |
31-75,131-175 |
90 |
e5wi2B1 |
5WI2 |
331.4.1 |
0.908 |
0.333 |
0.349 |
9.4|9.4|1 |
0.889 |
0.756 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
3 |
5 |
no |
yes:out |
PF12049 |
M1CT02 |
1-142 |
nD1 |
1-48,76-150 |
123 |
e5ehkB3 |
5EHK |
304.159.1 |
0.915 |
0.0 |
0.209 |
7.8|7.8|1 |
0.925 |
1.194 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Alpha-beta plait domain in NisB |
Alpha-beta plait domain in NisB |
3 |
6 |
no |
no |
PF12049 |
A0A2W4U6D0 |
1-140 |
nD1 |
1-130 |
130 |
e4wd9A4 |
4WD9 |
304.159.1 |
0.917 |
0.0 |
0.0 |
6.8|6.8|1 |
0.873 |
1.262 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Alpha-beta plait domain in NisB |
Alpha-beta plait domain in NisB |
4 |
5 |
no |
no |
PF12056 |
D8QWY5 |
8-392 |
nD1 |
6-310,351-375,381-405 |
355 |
e4jeuB1 |
4JEU |
603.1.1 |
0.938 |
0.0 |
0.0 |
8.3|8.9|0 |
0.918 |
3.381 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
9 |
0 |
no |
yes:7 |
PF12057 |
E2AQ86 |
305-418 |
nD2 |
141-165,301-385 |
110 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.942 |
0.0 |
0.0 |
6.4|6.4|1 |
0.957 |
1.497 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
3 |
no |
no |
PF12061 |
A0A2G2VLK1 |
93-348 |
nD2 |
116-220 |
105 |
e4kblA5 |
4KBL |
611.8.1 |
0.87 |
0.0 |
0.0 |
7.9|7.9|1 |
0.697 |
0.673 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
4 |
0 |
no |
no |
PF12061 |
A0A2G2VLK1 |
93-348 |
nD3 |
221-350 |
130 |
e4kblA5 |
4KBL |
611.8.1 |
0.87 |
0.0 |
0.0 |
9.1|9.1|1 |
0.812 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
5 |
0 |
no |
no |
PF12061 |
A0A6P6V055 |
131-375 |
nD2 |
246-385 |
140 |
e4m70H1 |
4M70 |
611.9.1 |
0.935 |
0.735 |
0.783 |
7.7|8.4|0 |
0.861 |
1.197 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
Resistance protein (Rx) N-terminal domain |
Resistance protein (Rx) N-terminal domain |
5 |
0 |
yes:out |
no |
PF12079 |
Q5YZA7 |
18-174 |
nD1 |
36-178 |
143 |
e6e5fA1 |
6E5F |
881.1.1 |
0.932 |
0.94 |
0.779 |
5.8|7.1|1 |
0.768 |
0.869 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
4 |
7 |
yes:out |
no |
PF12079 |
W5TCX2 |
20-185 |
nD1 |
56-190 |
135 |
e6e5fA1 |
6E5F |
881.1.1 |
0.927 |
0.974 |
0.878 |
6.2|7.0|1 |
0.743 |
0.821 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
7 |
yes:out |
no |
PF12083 |
A0A3D2SG32 |
62-182 |
nD2 |
61-213 |
153 |
e6tz4O1 |
6TZ4 |
3291.1.1 |
0.944 |
0.0 |
0.0 |
9.0|9.0|1 |
0.778 |
0.869 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
4 |
0 |
no |
no |
PF12083 |
A0A379B863 |
64-184 |
nD2 |
66-214 |
149 |
e3ajwA1 |
3AJW |
3755.2.1 |
0.86 |
0.0 |
0.0 |
6.5|6.5|1 |
0.828 |
1.096 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Flagellar FliJ protein |
Flagellar FliJ protein |
4 |
0 |
no |
no |
PF12083 |
A0A412HAI0 |
62-182 |
nD2 |
56-95,116-213 |
138 |
e6tz4O1 |
6TZ4 |
3291.1.1 |
0.947 |
0.0 |
0.0 |
8.7|8.7|1 |
0.77 |
0.784 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
4 |
0 |
no |
no |
PF12087 |
A0A3P0MZF2 |
1-110 |
nD1 |
1-100 |
100 |
e6iy4I1 |
6IY4 |
9.7.1 |
0.854 |
0.0 |
0.0 |
6.7|6.7|1 |
0.864 |
1.0 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Metalloprotease inhibitor |
Metalloprotease inhibitor |
0 |
8 |
no |
no |
PF12087 |
A0A3N8IUD5 |
1-110 |
nD1 |
1-100 |
100 |
e6iy4I1 |
6IY4 |
9.7.1 |
0.854 |
0.0 |
0.0 |
6.7|6.7|1 |
0.864 |
1.0 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Metalloprotease inhibitor |
Metalloprotease inhibitor |
0 |
8 |
no |
no |
PF12088 |
U4K4N6 |
6-62 |
nD1 |
1-65 |
65 |
e6swdE3 |
6SWD |
2.1.1 |
0.877 |
0.0 |
0.0 |
3.7|3.8|1 |
0.796 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
4 |
no |
no |
PF12088 |
A0A851HYD3 |
6-62 |
nD1 |
1-65 |
65 |
e6swdE3 |
6SWD |
2.1.1 |
0.878 |
0.0 |
0.0 |
3.9|4.2|1 |
0.796 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
4 |
no |
no |
PF12089 |
B0RH77 |
19-133 |
nD1 |
26-130 |
105 |
e7p3wO1 |
7P3W |
5041.1.1 |
0.918 |
0.0 |
0.0 |
6.2|6.4|0 |
0.955 |
1.346 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
3 |
1 |
no |
yes:2 |
PF12089 |
M1NI13 |
5-111 |
nD1 |
6-110 |
105 |
e4i0xK1 |
4I0X |
150.5.1 |
0.887 |
0.0 |
0.0 |
6.1|7.1|0 |
0.988 |
1.129 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
ESAT-6 like |
ESAT-6 like |
3 |
2 |
no |
yes:3 |
PF12091 |
D5X080 |
3-93 |
nD1 |
1-85 |
85 |
e3nm7A1 |
3NM7 |
295.1.1 |
0.881 |
0.0 |
0.0 |
3.5|3.5|0 |
0.798 |
0.697 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
4 |
no |
no |
PF12094 |
Q085T6 |
11-432 |
nD1 |
11-405 |
395 |
e6wilA1 |
6WIL |
5084.5.1 |
0.903 |
0.0 |
0.969 |
20.4|20.4|1 |
0.873 |
1.073 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
19 |
yes:in |
no |
PF12097 |
Q5NH68 |
10-371 |
nD2 |
136-490 |
355 |
e6ehbC1 |
6EHB |
5084.5.1 |
0.934 |
0.983 |
0.995 |
18.6|18.6|1 |
0.852 |
0.965 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
13 |
yes:out |
no |
PF12115 |
Q4PMP2 |
3-110 |
nD1 |
37-110 |
74 |
e3q2gB2 |
3Q2G |
3246.1.1 |
0.921 |
0.846 |
0.82 |
2.2|2.4|0 |
0.892 |
0.733 |
pymol |
more |
good_domain |
few secondary structure elements |
Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins |
Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins |
Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins |
1 |
5 |
yes:out |
no |
PF12118 |
Q12NB5 |
101-424 |
nD2 |
271-380 |
110 |
e5wbxB1 |
5WBX |
5055.1.1 |
0.854 |
0.0 |
0.0 |
5.9|5.9|1 |
0.661 |
1.375 |
pymol |
more |
good_domain |
extended segments |
Small-conductance potassium channel |
Small-conductance potassium channel |
Small-conductance potassium channel |
3 |
3 |
no |
no |
PF12128 |
Q8EAA0 |
8-1195 |
nD2 |
356-420,726-775 |
115 |
e6ds9A1 |
6DS9 |
604.1.1 |
0.927 |
0.0 |
0.0 |
8.3|10.8|0 |
0.929 |
1.045 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
yes:out |
PF12131 |
A4H5E5 |
341-415 |
nD2 |
356-440 |
85 |
e4g2sE1 |
4G2S |
73.1.1 |
0.857 |
0.0 |
0.0 |
3.9|4.1|1 |
0.783 |
0.708 |
pymol |
more |
good_domain |
beta sandwiches |
SMAD/FHA domain |
SMAD/FHA domain |
SMAD/FHA domain |
0 |
8 |
yes:out |
no |
PF12141 |
Q6BT17 |
165-681 |
nD1 |
76-100,131-695 |
590 |
e4onzA1 |
4ONZ |
5.1.2 |
0.867 |
0.0 |
0.939 |
13.8|15.4|1 |
0.897 |
1.815 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
5-bladed |
11 |
24 |
no |
yes:out |
PF12141 |
A3LTD5 |
68-538 |
nD2 |
41-559 |
519 |
e7firC1 |
7FIR |
5.1.2 |
0.921 |
0.0 |
0.969 |
19.3|20.0|1 |
0.919 |
1.597 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
5-bladed |
6 |
24 |
no |
no |
PF12141 |
A5E5E8 |
139-641 |
nD2 |
116-325,356-650 |
505 |
e4udiA1 |
4UDI |
5.1.2 |
0.899 |
0.0 |
0.947 |
19.1|19.4|1 |
0.893 |
1.554 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
5-bladed |
7 |
21 |
yes:out |
no |
PF12155 |
Q85PX3 |
9-96 |
nD1 |
1-170 |
170 |
e7f9oP1 |
7F9O |
3843.1.1 |
0.946 |
0.768 |
0.85 |
10.0|18.1|0 |
0.95 |
1.7 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
7 |
2 |
no |
yes:6 |
PF12155 |
A0S700 |
1-89 |
nD1 |
1-170 |
170 |
e7f9oP1 |
7F9O |
3843.1.1 |
0.909 |
0.463 |
0.655 |
11.4|17.1|0 |
0.955 |
1.7 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
7 |
2 |
yes:in |
yes:3 |
PF12156 |
Q0K9A4 |
37-120 |
nD1 |
36-85 |
50 |
e2yqpA1 |
2YQP |
377.9.1 |
0.882 |
0.0 |
0.0 |
3.1|4.4|0 |
0.854 |
1.053 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
HIT/MYND zinc finger-like |
HIT/MYND zinc finger-like |
1 |
2 |
no |
yes:out |
PF12158 |
A1ALI7 |
5-122 |
nD1 |
6-95 |
90 |
e6rarI2 |
6RAR |
2.1.1 |
0.942 |
0.0 |
0.0 |
5.0|5.0|1 |
0.843 |
0.865 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
6 |
no |
yes:out |
PF12159 |
A0A6G7VG08 |
126-215 |
nD1 |
1-220 |
220 |
e4qi1B1 |
4QI1 |
5001.1.1 |
0.92 |
0.171 |
0.148 |
6.1|12.9|1 |
0.66 |
0.771 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
6 |
0 |
no |
yes:7 |
PF12225 |
A0A5D8Q7V4 |
109-203 |
nD1 |
1-210 |
210 |
e2pjuC1 |
2PJU |
2007.1.10 |
0.947 |
0.0 |
0.0 |
7.3|9.1|0 |
0.971 |
2.234 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
PrpR receptor domain-like |
5 |
7 |
no |
no |
PF12225 |
A0A509LCN1 |
116-208 |
nD1 |
1-165,211-235 |
190 |
e3lzcA1 |
3LZC |
2007.1.16 |
0.9 |
0.0 |
0.83 |
7.1|9.4|0 |
0.898 |
1.681 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Iron-sulphur enzyme Dph2 |
3 |
9 |
no |
no |
PF12227 |
Q5L1T7 |
35-246 |
nD1 |
1-125 |
125 |
e5vm8A1 |
5VM8 |
1.1.9 |
0.902 |
0.0 |
0.0 |
2.4|2.4|1 |
0.814 |
0.906 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
3 |
7 |
no |
no |
PF12227 |
Q5L1T7 |
35-246 |
nD2 |
146-240 |
95 |
e4n1lA1 |
4N1L |
110.1.1 |
0.921 |
0.0 |
0.0 |
4.1|4.1|1 |
0.842 |
0.99 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF12227 |
B7GLZ2 |
35-246 |
nD1 |
1-125 |
125 |
e5vm8A1 |
5VM8 |
1.1.9 |
0.949 |
0.0 |
0.0 |
2.5|2.5|1 |
0.838 |
0.906 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
3 |
7 |
no |
no |
PF12227 |
A4IL64 |
35-246 |
nD2 |
156-240 |
85 |
e4n1lA1 |
4N1L |
110.1.1 |
0.924 |
0.0 |
0.0 |
4.1|4.1|1 |
0.842 |
0.885 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF12229 |
C4LGU5 |
188-298 |
nD2 |
186-310 |
125 |
e6tgyA1 |
6TGY |
221.1.1 |
0.87 |
0.0 |
0.0 |
3.6|7.9|0 |
0.75 |
1.33 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Ubiquitin-related |
Ubiquitin-like |
5 |
8 |
no |
no |
PF12234 |
C0NL69 |
639-1280 |
nD3 |
956-1195 |
240 |
e2gw1B1 |
2GW1 |
109.4.1 |
0.941 |
0.0 |
0.918 |
6.7|7.5|1 |
0.459 |
0.839 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
15 |
0 |
no |
no |
PF12238 |
A0A2B4RVS3 |
114-232 |
nD2 |
107-175 |
69 |
e1mnmA1 |
1MNM |
263.1.1 |
0.939 |
0.0 |
0.0 |
5.3|5.4|1 |
0.767 |
0.817 |
pymol |
more |
good_domain |
a+b three layers |
SRF-like |
SRF-like |
SRF-like |
3 |
2 |
no |
no |
PF12249 |
A0A1A2Y2X2 |
447-619 |
nD2 |
476-620 |
145 |
e3vu0B1 |
3VU0 |
3110.1.1 |
0.866 |
0.841 |
0.838 |
4.3|5.8|1 |
0.727 |
0.78 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
5 |
6 |
no |
yes:out |
PF12249 |
A0A1X2E417 |
439-611 |
nD2 |
466-610 |
145 |
e3vu0B1 |
3VU0 |
3110.1.1 |
0.875 |
0.48 |
0.413 |
5.4|5.4|1 |
0.72 |
0.78 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
5 |
6 |
yes:out |
yes:out |
PF12268 |
A0A290TQB7 |
2-176 |
nD1 |
6-170 |
165 |
e5gpoB1 |
5GPO |
223.1.1 |
0.943 |
0.0 |
0.0 |
4.9|5.8|1 |
0.867 |
1.13 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
5 |
7 |
no |
no |
PF12269 |
T1KQN3 |
224-455 |
nD3 |
196-290,341-460 |
215 |
e5nenB1 |
5NEN |
5086.1.1 |
0.878 |
0.0 |
0.0 |
8.8|9.3|0 |
0.76 |
2.544 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
4 |
3 |
no |
no |
PF12271 |
B8ML97 |
5-292 |
nD1 |
6-280 |
275 |
e7c86A1 |
7C86 |
5001.1.1 |
0.898 |
0.0 |
0.069 |
8.6|16.3|1 |
0.851 |
0.963 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
9 |
3 |
no |
yes:7 |
PF12271 |
A0A0D0A1F1 |
3-304 |
nD1 |
6-295 |
290 |
e7m3gB4 |
7M3G |
5001.1.1 |
0.942 |
0.0 |
0.0 |
12.3|14.8|1 |
0.881 |
1.016 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
9 |
2 |
no |
yes:7 |
PF12275 |
D0LXT2 |
34-365 |
nD1 |
1-370 |
370 |
e3mbrX1 |
3MBR |
5.1.4 |
0.928 |
0.0 |
0.396 |
19.0|19.0|1 |
0.963 |
1.031 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
6 |
25 |
no |
no |
PF12275 |
A0A0C2M3J3 |
24-350 |
nD1 |
6-355 |
350 |
e3mbrX1 |
3MBR |
5.1.4 |
0.928 |
0.0 |
0.238 |
18.0|18.0|1 |
0.948 |
0.975 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
6 |
24 |
no |
no |
PF12275 |
A0A3S0ZH32 |
24-349 |
nD1 |
6-354 |
349 |
e3mbrX1 |
3MBR |
5.1.4 |
0.919 |
0.0 |
0.273 |
18.5|18.5|1 |
0.948 |
0.972 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
24 |
no |
no |
PF12286 |
K0C8D6 |
1-71 |
nD1 |
6-70 |
65 |
e4v63CX1 |
4V63 |
330.3.1 |
0.896 |
0.0 |
0.0 |
5.2|7.3|0 |
0.824 |
0.778 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Peptidyl-tRNA hydrolase domain-like |
Peptidyl-tRNA hydrolase domain-like |
1 |
3 |
no |
no |
PF12297 |
Q86UK5 |
237-660 |
nD3 |
376-600,691-720,806-935,941-980 |
425 |
e3cazB1 |
3CAZ |
4177.1.1 |
0.874 |
0.0 |
0.0 |
7.2|7.4|0 |
0.854 |
1.703 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
12 |
0 |
yes:out |
yes:out |
PF12297 |
A0A6P6BLN1 |
21-416 |
nD2 |
131-360,446-465,561-585 |
275 |
e5nenB1 |
5NEN |
5086.1.1 |
0.865 |
0.0 |
0.0 |
7.1|8.8|0 |
0.722 |
3.254 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
8 |
0 |
no |
yes:out |
PF12304 |
A0A498LLX7 |
316-500 |
nD3 |
311-485 |
175 |
e5armA1 |
5ARM |
633.21.1 |
0.935 |
0.0 |
0.0 |
11.3|13.8|0 |
0.97 |
1.62 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
4 |
0 |
no |
yes:4 |
PF12305 |
A0A2G1ZAA8 |
4-93 |
nD1 |
1-95 |
95 |
e5iriB1 |
5IRI |
331.4.1 |
0.852 |
0.0 |
0.0 |
7.9|7.9|1 |
0.857 |
0.798 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
2 |
6 |
no |
no |
PF12305 |
B8CM00 |
4-93 |
nD1 |
1-95 |
95 |
e5iriB1 |
5IRI |
331.4.1 |
0.852 |
0.0 |
0.0 |
7.8|7.8|1 |
0.847 |
0.798 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
2 |
7 |
no |
no |
PF12305 |
A0A1S6HS76 |
4-93 |
nD1 |
1-95 |
95 |
e5iriB1 |
5IRI |
331.4.1 |
0.852 |
0.0 |
0.0 |
7.9|7.9|1 |
0.859 |
0.798 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
2 |
6 |
no |
no |
PF12319 |
A5K5E5 |
91-306 |
nD1 |
81-310 |
230 |
e6m3qF2 |
6M3Q |
604.1.1 |
0.917 |
0.0 |
0.0 |
7.2|7.2|1 |
0.936 |
2.091 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
7 |
0 |
yes:out |
no |
PF12319 |
A5KCS6 |
93-307 |
nD1 |
86-315 |
230 |
e4atmA1 |
4ATM |
4177.1.1 |
0.919 |
0.0 |
0.0 |
7.8|7.8|1 |
0.906 |
0.922 |
pymol |
na |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
6 |
0 |
no |
no |
PF12322 |
A0A2D6MDY2 |
11-234 |
nD1 |
6-85 |
80 |
e2ob9A1 |
2OB9 |
6050.1.1 |
0.933 |
0.65 |
0.805 |
7.8|8.1|0 |
0.743 |
0.702 |
pymol |
more |
good_domain |
a+b two layers |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
3 |
4 |
no |
no |
PF12322 |
A0A2E3XN97 |
11-238 |
nD1 |
6-85 |
80 |
e2ob9A1 |
2OB9 |
6050.1.1 |
0.905 |
0.517 |
0.793 |
7.7|7.8|0 |
0.733 |
0.702 |
pymol |
more |
good_domain |
a+b two layers |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
3 |
4 |
no |
no |
PF12322 |
A0A2E3XN97 |
11-238 |
nD2 |
86-115,211-239 |
59 |
e5wvwA1 |
5WVW |
4.26.1 |
0.909 |
0.841 |
0.8 |
3.2|3.2|1 |
0.759 |
1.017 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromatin protein Cren7 |
Chromatin protein Cren7 |
2 |
4 |
no |
no |
PF12322 |
A0A2E3XN97 |
11-238 |
nD3 |
121-210 |
90 |
e3kluA1 |
3KLU |
3103.1.1 |
0.856 |
0.0 |
0.0 |
5.4|5.4|1 |
0.729 |
0.776 |
pymol |
more |
good_domain |
alpha arrays |
Uncharacterized protein yqbN |
Uncharacterized protein yqbN |
Uncharacterized protein yqbN |
5 |
5 |
no |
no |
PF12322 |
A0A094KWB9 |
18-249 |
nD2 |
96-115,226-245 |
40 |
e5wvwA1 |
5WVW |
4.26.1 |
0.886 |
0.795 |
0.729 |
3.6|4.2|0 |
0.638 |
0.69 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromatin protein Cren7 |
Chromatin protein Cren7 |
1 |
4 |
no |
no |
PF12322 |
A0A094KWB9 |
18-249 |
nD3 |
131-220 |
90 |
e2ob9A1 |
2OB9 |
6050.1.1 |
0.886 |
0.595 |
0.508 |
3.7|4.7|0 |
0.752 |
0.789 |
pymol |
more |
good_domain |
a+b two layers |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
4 |
5 |
no |
no |
PF12325 |
C4R1F5 |
649-763 |
nD3 |
321-345,351-455,661-705,711-769 |
234 |
e4ll7A1 |
4LL7 |
3939.1.1 |
0.918 |
0.968 |
0.953 |
0.0|5.0|0 |
0.951 |
3.9 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
2 |
0 |
no |
no |
PF12334 |
Q53047 |
536-849 |
nD2 |
296-865 |
570 |
e2n3dA1 |
2N3D |
207.14.1 |
0.923 |
0.218 |
0.0 |
8.0|20.7|0 |
0.817 |
5.907 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Bactofilin A |
Bactofilin A |
1 |
51 |
yes:out |
no |
PF12334 |
O06653 |
536-849 |
nD3 |
541-670 |
130 |
e3p4gB1 |
3P4G |
207.6.1 |
0.944 |
0.0 |
0.0 |
14.4|14.7|0 |
0.43 |
0.718 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
0 |
11 |
yes:out |
no |
PF12335 |
A0A0L8HDW2 |
184-436 |
nD2 |
201-315 |
115 |
e4flbA1 |
4FLB |
109.4.1 |
0.91 |
0.0 |
0.0 |
5.2|7.4|1 |
0.743 |
0.402 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
2 |
no |
no |
PF12359 |
A0A5N5CTH5 |
201-233 |
nD2 |
56-320 |
265 |
e6sxhA4 |
6SXH |
570.1.1 |
0.899 |
0.0 |
0.0 |
4.4|4.4|1 |
0.909 |
2.12 |
pymol |
more |
good_domain |
alpha arrays |
Pre-protein crosslinking domain of SecA |
Pre-protein crosslinking domain of SecA |
Pre-protein crosslinking domain of SecA |
11 |
5 |
no |
no |
PF12365 |
A0A096GWN4 |
65-91 |
nD1 |
11-90 |
80 |
e4k12B1 |
4K12 |
632.19.1 |
0.851 |
0.0 |
0.0 |
6.1|6.1|1 |
0.91 |
0.93 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Choline binding protein A |
Choline binding protein A |
3 |
0 |
yes:in |
yes:2 |
PF12373 |
A0A0W4ZJN3 |
830-858 |
nD8 |
766-805,831-900 |
110 |
e2odvA3 |
2ODV |
604.1.1 |
0.924 |
0.0 |
0.0 |
8.0|8.0|0 |
0.816 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
2 |
no |
no |
PF12373 |
A0A0W4ZR75 |
819-847 |
nD6 |
756-795,826-890 |
105 |
e1h7cA1 |
1H7C |
604.7.1 |
0.889 |
0.0 |
0.0 |
8.7|8.7|1 |
0.922 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Tubulin chaperone cofactor A |
Tubulin chaperone cofactor A |
3 |
2 |
no |
yes:out |
PF12376 |
Q8STE0 |
162-301 |
nD1 |
31-285 |
255 |
e5goeA2 |
5GOE |
3615.1.1 |
0.914 |
0.0 |
0.0 |
4.3|4.3|1 |
0.844 |
0.726 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
7 |
4 |
yes:out |
no |
PF12400 |
J3NK21 |
184-311 |
nD1 |
86-145,181-310 |
190 |
e5f5pA1 |
5F5P |
1203.1.2 |
0.852 |
0.0 |
0.0 |
4.1|4.1|0 |
0.613 |
1.05 |
pymol |
more |
good_domain |
alpha bundles |
Shroom domain 2 |
Shroom domain 2 |
Human SD2 |
6 |
0 |
no |
yes:5 |
PF12421 |
Q8ZQF6 |
965-1106 |
nD10 |
1011-1140 |
130 |
e5fo8B2 |
5FO8 |
10.4.1 |
0.851 |
0.0 |
0.0 |
7.1|7.6|1 |
0.798 |
1.121 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
0 |
9 |
no |
no |
PF12421 |
A0A376ZHQ8 |
25-167 |
nD2 |
76-200 |
125 |
e5azxA1 |
5AZX |
10.1.2 |
0.948 |
0.0 |
0.0 |
7.4|7.4|0 |
0.928 |
0.796 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
9 |
no |
no |
PF12439 |
A0A1Q6I7L0 |
20-240 |
nD1 |
6-270 |
265 |
e5h3zB2 |
5H3Z |
12.3.1 |
0.949 |
1.0 |
0.877 |
12.1|16.0|1 |
0.895 |
0.943 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
4 |
18 |
no |
no |
PF12442 |
A0A811SR52 |
20-114 |
nD1 |
1-120 |
120 |
e3t6gD1 |
3T6G |
601.1.1 |
0.909 |
0.0 |
0.0 |
9.0|9.0|1 |
0.913 |
0.916 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
3 |
0 |
no |
yes:3 |
PF12447 |
Q9JZL6 |
8-120 |
nD1 |
11-125 |
115 |
e3a8yD1 |
3A8Y |
604.3.1 |
0.929 |
0.0 |
0.0 |
6.5|6.5|1 |
0.869 |
1.307 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
4 |
0 |
no |
no |
PF12449 |
C0NZX1 |
204-1299 |
nD5 |
831-1120 |
290 |
e6h02A3 |
6H02 |
109.4.1 |
0.867 |
0.0 |
0.0 |
3.5|4.5|1 |
0.43 |
1.014 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
12 |
4 |
no |
no |
PF12454 |
B2W1R1 |
4-40 |
nD1 |
21-370 |
350 |
e4nkhE1 |
4NKH |
207.1.1 |
0.866 |
0.0 |
0.98 |
13.0|17.0|1 |
0.802 |
1.232 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
3 |
24 |
yes:out |
no |
PF12461 |
A0A037UPW7 |
43-734 |
nD3 |
91-105,306-430,471-505 |
175 |
e7jwgE1 |
7JWG |
77.1.1 |
0.866 |
0.0 |
0.0 |
5.8|5.8|1 |
0.442 |
1.061 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
2 |
8 |
yes:out |
yes:out |
PF12483 |
A9S6Y2 |
162-328 |
nD1 |
51-65,116-160,186-225,261-295 |
135 |
e6aqgC1 |
6AQG |
2.1.1 |
0.929 |
0.0 |
0.274 |
6.6|7.1|1 |
0.858 |
1.298 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
7 |
no |
yes:out |
PF12491 |
A0A7J7U421 |
540-596 |
nD3 |
126-220,226-250,341-365,371-395,401-585 |
355 |
e4h8sC3 |
4H8S |
4177.1.1 |
0.946 |
0.0 |
0.565 |
8.0|11.2|0 |
0.784 |
1.423 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
7 |
0 |
no |
no |
PF12499 |
D8U3Z2 |
319-462 |
nD3 |
321-469 |
149 |
e1f0lA1 |
1F0L |
11.1.5 |
0.945 |
0.0 |
0.022 |
6.7|6.7|1 |
0.821 |
0.968 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
8 |
no |
no |
PF12499 |
A0A836BWH4 |
9-152 |
nD1 |
11-159 |
149 |
e2rttA1 |
2RTT |
11.1.5 |
0.944 |
0.0 |
0.0 |
6.0|7.2|1 |
0.94 |
0.968 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
10 |
no |
no |
PF12500 |
A0A1H4ICT4 |
246-381 |
nD2 |
221-405 |
185 |
e6fchA1 |
6FCH |
7573.1.1 |
0.868 |
0.0 |
0.0 |
8.7|8.8|1 |
0.792 |
1.016 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
PRTase-like |
PRTase-like |
PRTase-like |
5 |
8 |
no |
no |
PF12500 |
A0A5C5R5G9 |
236-371 |
nD2 |
221-395 |
175 |
e6fchA1 |
6FCH |
7573.1.1 |
0.897 |
0.0 |
0.0 |
9.2|9.2|1 |
0.788 |
0.962 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
PRTase-like |
PRTase-like |
PRTase-like |
5 |
7 |
no |
no |
PF12502 |
A0A1G4VSD3 |
13-183 |
nD1 |
11-180 |
170 |
e5zx9A1 |
5ZX9 |
881.1.1 |
0.936 |
0.502 |
0.397 |
6.6|8.9|1 |
0.828 |
1.033 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
9 |
no |
no |
PF12502 |
A0A7D4TKC5 |
13-185 |
nD1 |
6-173 |
168 |
e5zx9A1 |
5ZX9 |
881.1.1 |
0.939 |
0.49 |
0.374 |
6.8|8.8|1 |
0.858 |
1.021 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
9 |
no |
no |
PF12502 |
A0A6J6C6Q5 |
13-176 |
nD1 |
6-170 |
165 |
e5zx9A1 |
5ZX9 |
881.1.1 |
0.892 |
0.326 |
0.286 |
6.4|8.8|1 |
0.813 |
1.003 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
9 |
no |
no |
PF12506 |
A0A292IHZ5 |
35-1133 |
nD4 |
966-1050 |
85 |
e2lc3A1 |
2LC3 |
130.1.1 |
0.877 |
0.0 |
0.0 |
2.6|4.5|0 |
0.845 |
1.545 |
pymol |
more |
good_domain |
alpha arrays |
LEM/SAP HeH motif-like |
LEM/SAP HeH motif |
LEM/SAP HeH motif |
3 |
0 |
yes:out |
no |
PF12525 |
A7TC77 |
263-341 |
nD3 |
261-490 |
230 |
e4h8aA1 |
4H8A |
276.1.1 |
0.949 |
0.995 |
0.995 |
19.3|19.3|1 |
0.63 |
0.669 |
pymol |
more |
good_domain |
a+b three layers |
L-sulfolactate dehydrogenase-like |
L-sulfolactate dehydrogenase-like |
L-sulfolactate dehydrogenase-like |
6 |
10 |
yes:out |
no |
PF12528 |
A0A1V9DBD1 |
11-79 |
nD1 |
6-79 |
74 |
e3emoC3 |
3EMO |
274.1.1 |
0.929 |
0.0 |
0.56 |
5.5|6.1|1 |
0.796 |
0.602 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
2 |
2 |
no |
no |
PF12537 |
A0A226P7I6 |
142-205 |
nD2 |
171-240 |
70 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.937 |
0.566 |
0.0 |
8.8|8.8|1 |
0.919 |
0.952 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
yes:out |
PF12541 |
A7H129 |
3-275 |
nD1 |
6-278 |
273 |
e3jurD1 |
3JUR |
207.2.1 |
0.926 |
0.988 |
0.99 |
17.0|23.5|1 |
0.7 |
0.718 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
17 |
no |
no |
PF12541 |
A0A1H2T7C1 |
3-271 |
nD1 |
16-275 |
260 |
e1oflA1 |
1OFL |
207.2.1 |
0.939 |
0.975 |
0.991 |
17.2|23.7|1 |
0.732 |
0.684 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
22 |
no |
no |
PF12543 |
G8NY47 |
87-294 |
nD1 |
52-155,286-295 |
114 |
e4jtmB1 |
4JTM |
3070.1.1 |
0.941 |
0.0 |
0.0 |
4.1|4.3|1 |
0.893 |
1.341 |
pymol |
more |
good_domain |
a+b complex topology |
N0 domain in phage tail proteins and secretins-like |
N0 domain in phage tail proteins and secretins |
N0 domain in phage tail proteins and secretins |
4 |
6 |
yes:out |
no |
PF12543 |
Q020C7 |
57-235 |
nD1 |
26-120,226-240 |
110 |
e4jtmB1 |
4JTM |
3070.1.1 |
0.938 |
0.0 |
0.0 |
5.0|5.3|1 |
0.933 |
1.294 |
pymol |
more |
good_domain |
a+b complex topology |
N0 domain in phage tail proteins and secretins-like |
N0 domain in phage tail proteins and secretins |
N0 domain in phage tail proteins and secretins |
4 |
6 |
yes:out |
no |
PF12543 |
Q020C7 |
57-235 |
nD2 |
121-225 |
105 |
e4m0hA2 |
4M0H |
3070.1.1 |
0.866 |
0.618 |
0.796 |
2.8|2.8|1 |
0.781 |
1.235 |
pymol |
more |
good_domain |
a+b complex topology |
N0 domain in phage tail proteins and secretins-like |
N0 domain in phage tail proteins and secretins |
N0 domain in phage tail proteins and secretins |
2 |
4 |
yes:out |
no |
PF12545 |
Q6NA49 |
540-650 |
nD2 |
6-15,251-363,386-560,586-660 |
373 |
e2odlA1 |
2ODL |
207.2.1 |
0.906 |
0.0 |
0.083 |
22.2|22.2|1 |
0.699 |
0.982 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
6 |
22 |
no |
no |
PF12558 |
R7A507 |
236-308 |
nD1 |
1-570 |
570 |
e2xzlA4 |
2XZL |
2004.1.1 |
0.906 |
0.0 |
0.999 |
4.6|32.2|1 |
0.699 |
2.556 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
18 |
20 |
no |
no |
PF12566 |
Q8ZL01 |
63-179 |
nD1 |
1-405 |
405 |
e6rxtUA2 |
6RXT |
5.1.4 |
0.932 |
0.997 |
0.998 |
23.0|26.0|0 |
0.932 |
1.128 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
22 |
no |
no |
PF12566 |
A0A0K2NXI5 |
63-179 |
nD1 |
1-415 |
415 |
e6rxtUA2 |
6RXT |
5.1.4 |
0.946 |
0.995 |
0.998 |
23.0|25.7|0 |
0.937 |
1.156 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
23 |
no |
no |
PF12566 |
A0A0H3H4U5 |
63-179 |
nD1 |
1-405 |
405 |
e6rxtUA2 |
6RXT |
5.1.4 |
0.934 |
0.996 |
0.998 |
22.9|25.7|0 |
0.938 |
1.128 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
22 |
no |
no |
PF12570 |
A4YTL0 |
55-183 |
nD1 |
6-245 |
240 |
e2wp7A1 |
2WP7 |
219.1.1 |
0.853 |
0.0 |
0.131 |
7.0|7.0|1 |
0.866 |
1.071 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
12 |
yes:in |
no |
PF12576 |
A0A3D4ASN2 |
158-311 |
nD3 |
211-300 |
90 |
e3mq1B1 |
3MQ1 |
622.4.1 |
0.895 |
0.0 |
0.0 |
6.1|6.1|1 |
0.761 |
0.845 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
Mite allergen Der p 5-related |
Mite allergen Der p 5-related |
2 |
1 |
no |
yes:2 |
PF12585 |
A0A4U6XI09 |
10-100 |
nD1 |
1-120 |
120 |
e3o2pE1 |
3O2P |
101.1.2 |
0.862 |
0.0 |
0.217 |
3.8|4.1|0 |
0.817 |
1.263 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
1 |
no |
no |
PF12586 |
A0A1B9IXG5 |
17-60 |
nD1 |
16-60 |
45 |
e4i6jB2 |
4I6J |
145.1.1 |
0.887 |
0.806 |
0.0 |
0.0|6.2|0 |
0.951 |
0.714 |
pymol |
more |
good_domain |
alpha arrays |
F-box domain |
F-box domain |
F-box domain |
2 |
1 |
no |
no |
PF12607 |
Q2KXC4 |
129-190 |
nD2 |
26-95,116-160,496-515 |
135 |
e5j1gB2 |
5J1G |
604.1.1 |
0.915 |
0.0 |
0.368 |
10.5|12.6|0 |
0.885 |
1.227 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
1 |
yes:out |
yes:out |
PF12607 |
W8RUY7 |
165-227 |
nD3 |
196-635 |
440 |
e3udcG6 |
3UDC |
5058.1.1 |
0.93 |
1.0 |
0.98 |
7.3|8.9|1 |
0.97 |
4.56 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
12 |
2 |
yes:out |
yes:11 |
PF12611 |
D6XTX1 |
107-130 |
nD1 |
51-130 |
80 |
e7btuA2 |
7BTU |
4312.2.1 |
0.874 |
0.0 |
0.0 |
4.6|5.8|0 |
0.794 |
1.019 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
YaeB-like |
YaeB-like |
3 |
5 |
no |
no |
PF12614 |
Q087H4 |
3-127 |
nD1 |
6-80 |
75 |
e1vi7A1 |
1VI7 |
304.24.1 |
0.945 |
0.0 |
0.0 |
6.0|6.0|1 |
0.9 |
0.82 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
3 |
3 |
no |
no |
PF12614 |
Q6LS99 |
3-128 |
nD1 |
6-80 |
75 |
e1vi7A1 |
1VI7 |
304.24.1 |
0.922 |
0.0 |
0.0 |
5.6|5.6|1 |
0.889 |
0.82 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
3 |
3 |
no |
no |
PF12614 |
Q12K07 |
2-127 |
nD1 |
6-80 |
75 |
e2jzxA2 |
2JZX |
327.11.2 |
0.905 |
0.0 |
0.0 |
5.2|5.2|1 |
0.834 |
0.882 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Eukaryotic type KH-domain (KH-domain type I) |
3 |
3 |
no |
no |
PF12615 |
Q93GL8 |
31-128 |
nD1 |
26-135 |
110 |
e6nr851 |
6NR8 |
192.2.1 |
0.906 |
0.0 |
0.0 |
4.6|6.7|0 |
0.888 |
1.028 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
3 |
2 |
no |
yes:2 |
PF12621 |
A0A1D8PEK8 |
777-866 |
nD4 |
216-310,816-865 |
145 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.924 |
0.356 |
0.346 |
6.8|6.8|1 |
0.92 |
1.973 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
4 |
no |
yes:out |
PF12632 |
H3D561 |
154-453 |
nD2 |
86-120,206-235,266-425 |
225 |
e1rxqA1 |
1RXQ |
620.1.1 |
0.916 |
0.0 |
0.0 |
7.6|7.6|1 |
0.82 |
1.406 |
pymol |
more |
good_domain |
alpha bundles |
YfiT-like putative metal-dependent hydrolases |
YfiT-like putative metal-dependent hydrolases |
YfiT-like putative metal-dependent hydrolases |
8 |
0 |
no |
yes:out |
PF12632 |
A7REW6 |
115-404 |
nD2 |
21-80,141-205,231-365 |
260 |
e2oqmA1 |
2OQM |
620.1.1 |
0.854 |
0.0 |
0.0 |
6.9|6.9|1 |
0.801 |
1.625 |
pymol |
more |
good_domain |
alpha bundles |
YfiT-like putative metal-dependent hydrolases |
YfiT-like putative metal-dependent hydrolases |
YfiT-like putative metal-dependent hydrolases |
6 |
0 |
no |
yes:1 |
PF12637 |
A0A7U9MST0 |
3-75 |
nD1 |
6-78 |
73 |
e4eb5C1 |
4EB5 |
244.3.1 |
0.881 |
0.604 |
0.767 |
5.7|7.2|0 |
0.67 |
0.635 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
3 |
no |
no |
PF12637 |
A0A7J0B7L3 |
3-75 |
nD1 |
6-78 |
73 |
e4eb5C1 |
4EB5 |
244.3.1 |
0.882 |
0.604 |
0.767 |
5.6|7.2|0 |
0.67 |
0.635 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
3 |
no |
no |
PF12637 |
A0A1Y4HI34 |
5-78 |
nD1 |
6-80 |
75 |
e4eb5C1 |
4EB5 |
244.3.1 |
0.948 |
0.962 |
0.974 |
6.2|7.7|0 |
0.691 |
0.652 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
SufE/NifU |
SufE/NifU |
3 |
3 |
no |
no |
PF12648 |
B0G9X0 |
2-93 |
nD1 |
1-85 |
85 |
e3vdpD2 |
3VDP |
102.1.1 |
0.871 |
0.0 |
0.0 |
3.3|3.7|0 |
0.975 |
1.09 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
SAM domain-like |
3 |
3 |
no |
yes:2 |
PF12663 |
R6Q2J4 |
3-132 |
nD1 |
6-135 |
130 |
e2kl4A1 |
2KL4 |
241.9.1 |
0.948 |
0.975 |
0.966 |
7.4|7.5|1 |
0.797 |
1.074 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
YdhG-like |
YdhG-like |
4 |
5 |
no |
no |
PF12663 |
A0A174ZLD8 |
10-134 |
nD1 |
16-135 |
120 |
e2oc6A2 |
2OC6 |
241.9.1 |
0.941 |
0.961 |
0.967 |
7.4|7.4|1 |
0.803 |
0.992 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
YdhG-like |
YdhG-like |
4 |
5 |
no |
no |
PF12666 |
A0A0G0PZH9 |
5-88 |
nD1 |
11-80 |
70 |
e3besR3 |
3BES |
614.1.1 |
0.891 |
0.0 |
0.0 |
4.8|5.0|0 |
0.947 |
1.129 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
L27 domain |
L27 domain |
L27 domain |
3 |
4 |
no |
yes:2 |
PF12668 |
A0A1G4Q108 |
9-68 |
nD1 |
1-70 |
70 |
e7od1A5 |
7OD1 |
103.1.1 |
0.855 |
0.0 |
0.871 |
4.6|4.9|0 |
0.872 |
1.228 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
4 |
0 |
no |
no |
PF12672 |
A0A233V8N2 |
6-175 |
nD1 |
1-180 |
180 |
e4r29B1 |
4R29 |
320.6.1 |
0.868 |
0.34 |
0.945 |
4.4|4.4|1 |
0.493 |
0.887 |
pymol |
more |
good_domain |
a+b two layers |
R3H domain-like |
Cysteine methyltransferase effector NleE |
Cysteine methyltransferase effector NleE |
7 |
3 |
no |
no |
PF12676 |
A0A1I2PEJ3 |
3-108 |
nD1 |
6-108 |
103 |
e1wu0A1 |
1WU0 |
5041.1.1 |
0.915 |
0.0 |
0.0 |
7.7|7.7|1 |
0.939 |
1.321 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
4 |
0 |
no |
yes:4 |
PF12676 |
A0A3A5HJA5 |
8-118 |
nD1 |
6-120 |
115 |
e3l39A1 |
3L39 |
604.5.1 |
0.932 |
0.0 |
0.0 |
5.0|5.0|1 |
0.512 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:4 |
PF12677 |
C3AG17 |
6-59 |
nD1 |
6-55 |
50 |
e2lt7A3 |
2LT7 |
386.1.1 |
0.917 |
0.0 |
0.923 |
2.4|2.4|1 |
0.809 |
1.515 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
1 |
4 |
no |
no |
PF12687 |
E6UA52 |
21-159 |
nD2 |
56-125 |
70 |
e4w4mK1 |
4W4M |
327.16.1 |
0.947 |
0.839 |
0.89 |
6.1|6.4|1 |
0.875 |
0.979 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif II in type III secretion system |
Ring-building motif II in type III secretion system |
2 |
3 |
no |
no |
PF12700 |
A0A0A1S9P2 |
2-406 |
nD1 |
116-165 |
50 |
e5szjB1 |
5SZJ |
192.29.1 |
0.942 |
0.0 |
0.0 |
7.5|7.5|1 |
0.795 |
0.658 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
2 |
1 |
no |
yes:out |
PF12805 |
A0A2U2GZH9 |
63-341 |
nD1 |
156-340 |
185 |
e6xr2E1 |
6XR2 |
109.3.1 |
0.861 |
0.0 |
0.0 |
6.4|7.1|0 |
0.407 |
0.93 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
0 |
no |
yes:out |
PF12863 |
A0A7T9CEP2 |
31-237 |
nD1 |
26-105 |
80 |
e1gofA2 |
1GOF |
11.1.1 |
0.934 |
0.0 |
0.0 |
3.5|3.5|1 |
0.646 |
0.741 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
5 |
yes:out |
yes:out |
PF12863 |
H1YY54 |
51-253 |
nD1 |
46-130 |
85 |
e1g0dA1 |
1G0D |
11.1.1 |
0.889 |
0.0 |
0.0 |
2.8|2.8|1 |
0.53 |
0.787 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:out |
no |
PF12873 |
A0A6N9QC28 |
22-243 |
nD1 |
1-104 |
104 |
e5ja8C1 |
5JA8 |
4312.1.1 |
0.883 |
0.0 |
0.0 |
4.3|4.7|1 |
0.86 |
1.149 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
3 |
no |
no |
PF12873 |
A0A6N9QC28 |
22-243 |
nD2 |
123-245 |
123 |
e5cegB1 |
5CEG |
4312.1.1 |
0.936 |
0.0 |
0.0 |
4.5|5.5|1 |
0.903 |
1.359 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
5 |
no |
no |
PF12877 |
Q1LY95 |
67-748 |
nD2 |
71-190 |
120 |
e5c2uA1 |
5C2U |
304.166.1 |
0.937 |
0.374 |
0.381 |
10.7|10.7|1 |
0.81 |
1.034 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nup54 ferredoxin-like domain |
Nup54 ferredoxin-like domain |
4 |
6 |
no |
yes:out |
PF12877 |
Q6ZVL6 |
931-1569 |
nD2 |
936-1045 |
110 |
e5c2uA1 |
5C2U |
304.166.1 |
0.943 |
0.433 |
0.357 |
10.8|10.8|1 |
0.784 |
0.948 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nup54 ferredoxin-like domain |
Nup54 ferredoxin-like domain |
4 |
5 |
no |
yes:out |
PF12877 |
Q6ZVL6 |
931-1569 |
nD3 |
1051-1175 |
125 |
e5c2uA1 |
5C2U |
304.166.1 |
0.896 |
0.221 |
0.384 |
9.1|9.1|1 |
0.759 |
1.078 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nup54 ferredoxin-like domain |
Nup54 ferredoxin-like domain |
4 |
4 |
no |
yes:out |
PF12878 |
A0A679KWR2 |
189-374 |
nD1 |
1-405 |
405 |
e6wc3A1 |
6WC3 |
109.4.1 |
0.946 |
0.0 |
0.0 |
5.3|5.9|1 |
0.417 |
1.416 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
13 |
2 |
no |
yes:out |
PF12889 |
A0A3S4EWZ7 |
1-272 |
nD1 |
1-145 |
145 |
e2d4uA1 |
2D4U |
601.4.1 |
0.93 |
0.0 |
0.0 |
9.1|9.5|1 |
0.851 |
1.007 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF12929 |
N1JI25 |
168-620 |
nD3 |
416-525,547-620 |
184 |
e5wbsA1 |
5WBS |
543.1.1 |
0.902 |
0.762 |
0.336 |
3.3|5.2|1 |
0.803 |
1.129 |
pymol |
more |
good_domain |
few secondary structure elements |
Frizzled cysteine-rich domain-related |
Frizzled cysteine-rich domain-related |
Frizzled cysteine-rich domain-related |
4 |
5 |
no |
yes:out |
PF12929 |
B8NSG7 |
770-1204 |
nD5 |
1016-1060,1081-1205 |
170 |
e7me4A2 |
7ME4 |
543.1.1 |
0.945 |
0.0 |
0.213 |
6.2|6.4|1 |
0.842 |
1.043 |
pymol |
more |
good_domain |
few secondary structure elements |
Frizzled cysteine-rich domain-related |
Frizzled cysteine-rich domain-related |
Frizzled cysteine-rich domain-related |
5 |
6 |
no |
yes:out |
PF12938 |
B4L7C4 |
671-895 |
nD2 |
771-865 |
95 |
e2r9iA1 |
2R9I |
5055.1.1 |
0.921 |
0.0 |
0.0 |
8.4|8.4|1 |
0.957 |
1.188 |
pymol |
more |
good_domain |
extended segments |
Small-conductance potassium channel |
Small-conductance potassium channel |
Small-conductance potassium channel |
3 |
0 |
no |
no |
PF12938 |
I3IRW6 |
1140-1361 |
nD3 |
1231-1330 |
100 |
e1k4tA5 |
1K4T |
192.8.1 |
0.89 |
0.0 |
0.0 |
9.4|9.9|0 |
0.977 |
1.361 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
no |
PF12943 |
A2GB63 |
4-245 |
nD1 |
31-75,131-195 |
110 |
e2jswA1 |
2JSW |
601.1.2 |
0.854 |
0.0 |
0.0 |
4.9|4.9|1 |
0.636 |
0.667 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
no |
PF12952 |
C7N2N3 |
2-180 |
nD1 |
1-110,151-185 |
145 |
e6vx4G1 |
6VX4 |
237.1.1 |
0.891 |
0.0 |
0.0 |
3.6|6.1|1 |
0.666 |
0.711 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
6 |
6 |
no |
no |
PF12960 |
N2AKE4 |
487-613 |
nD6 |
481-615 |
135 |
e1r5qA1 |
1R5Q |
4982.1.1 |
0.882 |
0.0 |
0.0 |
4.5|5.1|1 |
0.804 |
1.317 |
pymol |
more |
good_domain |
alpha arrays |
KaiA/RbsU domain-like |
KaiA/RbsU domain |
KaiA/RbsU domain |
5 |
1 |
no |
no |
PF12966 |
A0A1N6I8W2 |
2-88 |
nD1 |
1-85 |
85 |
e6pajB2 |
6PAJ |
605.1.1 |
0.876 |
0.0 |
0.0 |
6.2|6.2|1 |
0.831 |
1.164 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
yes:in |
yes:1 |
PF12982 |
A0A7W7MZ34 |
33-352 |
nD2 |
86-360 |
275 |
e4dzzB1 |
4DZZ |
2004.1.1 |
0.931 |
0.0 |
0.0 |
8.4|8.4|1 |
0.859 |
1.233 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
8 |
13 |
no |
no |
PF12982 |
A0A1H8ECD0 |
32-348 |
nD2 |
96-359 |
264 |
e4dzzB1 |
4DZZ |
2004.1.1 |
0.946 |
0.0 |
0.0 |
8.6|8.6|1 |
0.859 |
1.184 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
10 |
12 |
no |
no |
PF12983 |
A0A645BYZ1 |
7-190 |
nD1 |
21-90 |
70 |
e2j6zA1 |
2J6Z |
4982.1.1 |
0.868 |
0.0 |
0.0 |
5.8|5.8|1 |
0.651 |
0.683 |
pymol |
more |
good_domain |
alpha arrays |
KaiA/RbsU domain-like |
KaiA/RbsU domain |
KaiA/RbsU domain |
4 |
0 |
no |
no |
PF12992 |
A6KY60 |
27-117 |
nD1 |
26-120 |
95 |
e1ei5A2 |
1EI5 |
9.4.1 |
0.915 |
0.0 |
0.869 |
10.0|10.0|1 |
0.864 |
0.984 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
1 |
8 |
yes:out |
no |
PF12992 |
A0A060RAJ1 |
3-89 |
nD1 |
1-90 |
90 |
e1ei5A2 |
1EI5 |
9.4.1 |
0.915 |
0.0 |
0.918 |
10.0|10.0|1 |
0.849 |
0.933 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
1 |
8 |
no |
no |
PF12993 |
A0A317UIF2 |
3-175 |
nD2 |
96-170 |
75 |
e3bpqD1 |
3BPQ |
4312.1.1 |
0.856 |
0.0 |
0.0 |
4.9|4.9|1 |
0.703 |
0.829 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
4 |
no |
no |
PF12994 |
C4ZGD9 |
18-315 |
nD1 |
6-110 |
105 |
e3frnA2 |
3FRN |
222.1.1 |
0.878 |
0.0 |
0.0 |
4.3|4.3|1 |
0.826 |
0.739 |
pymol |
more |
good_domain |
a+b two layers |
Thioesterase/thiol ester dehydrase-isomerase-like |
Thioesterase/thiol ester dehydrase-isomerase |
Thioesterase/thiol ester dehydrase-isomerase |
1 |
7 |
no |
no |
PF12995 |
C4Z886 |
31-208 |
nD2 |
96-220 |
125 |
e4nbqB7 |
4NBQ |
101.11.1 |
0.869 |
0.0 |
0.0 |
4.8|4.8|1 |
0.797 |
1.404 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
3 |
2 |
no |
no |
PF12995 |
A0A374I8U1 |
11-190 |
nD2 |
76-200 |
125 |
e4kb4A1 |
4KB4 |
310.2.1 |
0.937 |
0.349 |
0.406 |
4.3|4.3|1 |
0.51 |
0.679 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
3 |
2 |
no |
no |
PF12997 |
A0A1V2YGU2 |
6-286 |
nD1 |
16-150,216-290 |
210 |
e2awnB5 |
2AWN |
2.4.1 |
0.885 |
0.0 |
0.0 |
3.8|3.8|1 |
0.826 |
3.134 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
MOP-like |
MOP-like |
2 |
13 |
no |
no |
PF13013 |
B2WC03 |
23-127 |
nD1 |
41-60,86-105 |
40 |
e4i6jB2 |
4I6J |
145.1.1 |
0.941 |
0.901 |
0.0 |
0.0|0.0|0 |
0.876 |
0.635 |
pymol |
more |
good_domain |
alpha arrays |
F-box domain |
F-box domain |
F-box domain |
2 |
1 |
no |
no |
PF13013 |
Q10223 |
149-251 |
nD2 |
166-235 |
70 |
e3wsoA2 |
3WSO |
145.1.1 |
0.903 |
0.382 |
0.0 |
4.9|4.9|1 |
0.846 |
1.111 |
pymol |
more |
good_domain |
alpha arrays |
F-box domain |
F-box domain |
F-box domain |
4 |
0 |
no |
no |
PF13024 |
Q8DT78 |
17-88 |
nD1 |
16-85 |
70 |
e2wbmA2 |
2WBM |
304.24.1 |
0.929 |
0.0 |
0.0 |
5.9|5.9|1 |
0.869 |
0.765 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
2 |
4 |
no |
no |
PF13024 |
Q835H0 |
4-76 |
nD1 |
6-70 |
65 |
e2wbmA2 |
2WBM |
304.24.1 |
0.921 |
0.0 |
0.0 |
6.1|6.1|1 |
0.822 |
0.71 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
2 |
4 |
no |
no |
PF13024 |
A0A6L8PUN1 |
20-96 |
nD1 |
21-90 |
70 |
e2wbmA2 |
2WBM |
304.24.1 |
0.948 |
0.0 |
0.0 |
5.7|5.7|1 |
0.851 |
0.765 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
2 |
4 |
no |
no |
PF13029 |
Q9R338 |
1-76 |
nD1 |
6-85,126-140 |
95 |
e1ztsA1 |
1ZTS |
4275.1.1 |
0.923 |
0.0 |
0.0 |
3.8|3.8|1 |
0.721 |
0.751 |
pymol |
more |
good_domain |
alpha arrays |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
4 |
0 |
no |
no |
PF13030 |
A0A2M9MQL1 |
1-221 |
nD1 |
1-249 |
249 |
e6zpaA1 |
6ZPA |
131.1.1 |
0.947 |
0.713 |
0.842 |
5.7|6.4|1 |
0.802 |
1.078 |
pymol |
more |
good_domain |
alpha complex topology |
PDEase-like |
HD-domain/PDEase-like |
HD-domain/PDEase-like |
6 |
6 |
no |
no |
PF13043 |
A0A0E1M7L8 |
25-64 |
nD1 |
1-60 |
60 |
e4v9f61 |
4V9F |
3115.1.1 |
0.946 |
0.89 |
0.537 |
6.2|7.5|1 |
0.927 |
0.769 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF13046 |
A0A4Y8M7N6 |
1-64 |
nD1 |
1-65 |
65 |
e7o7yBS1 |
7O7Y |
3115.1.1 |
0.857 |
0.0 |
0.0 |
5.8|6.1|1 |
0.849 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF13046 |
A0A386ZTF6 |
1-64 |
nD1 |
1-65 |
65 |
e7o7yBS1 |
7O7Y |
3115.1.1 |
0.853 |
0.0 |
0.0 |
5.7|5.9|1 |
0.839 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
yes:in |
no |
PF13049 |
A0A7Z1G1E7 |
1-93 |
nD1 |
1-95 |
95 |
e2i9xA1 |
2I9X |
4180.1.1 |
0.87 |
0.0 |
0.0 |
4.3|4.3|1 |
0.886 |
1.131 |
pymol |
more |
good_domain |
a+b two layers |
SpoVG-like |
SpoVG-like |
SpoVG-like |
1 |
6 |
no |
no |
PF13057 |
A0PYF0 |
36-259 |
nD1 |
46-145 |
100 |
e4r7rA1 |
4R7R |
3784.1.1 |
0.939 |
0.0 |
0.0 |
7.8|7.8|1 |
0.846 |
0.813 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
2 |
6 |
no |
yes:out |
PF13057 |
A0PYF0 |
36-259 |
nD2 |
146-255 |
110 |
e4r7rA1 |
4R7R |
3784.1.1 |
0.942 |
0.385 |
0.429 |
9.9|9.9|1 |
0.819 |
0.894 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
3 |
6 |
no |
yes:out |
PF13057 |
U5MLH2 |
40-271 |
nD1 |
51-150 |
100 |
e4q0yB1 |
4Q0Y |
3784.1.1 |
0.939 |
0.0 |
0.0 |
7.4|7.9|1 |
0.797 |
0.813 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
2 |
6 |
no |
yes:out |
PF13057 |
C3GRP5 |
2-218 |
nD1 |
16-110 |
95 |
e2mctA1 |
2MCT |
3784.1.1 |
0.881 |
0.0 |
0.0 |
7.3|8.0|1 |
0.833 |
0.772 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
2 |
6 |
no |
no |
PF13059 |
A0A243IXH8 |
7-85 |
nD1 |
16-80 |
65 |
e3wa2X2 |
3WA2 |
243.5.1 |
0.875 |
0.0 |
0.0 |
5.8|5.8|1 |
0.703 |
0.537 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Amine oxidase N-terminal region |
Amine oxidase N-terminal region |
3 |
4 |
no |
no |
PF13059 |
A0A243E5A5 |
7-85 |
nD1 |
16-80 |
65 |
e4exrA3 |
4EXR |
243.3.1 |
0.904 |
0.0 |
0.0 |
4.9|5.4|1 |
0.922 |
0.65 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
4 |
no |
no |
PF13059 |
R8EQJ4 |
7-85 |
nD1 |
16-80 |
65 |
e4exrA3 |
4EXR |
243.3.1 |
0.92 |
0.0 |
0.0 |
5.1|5.3|1 |
0.938 |
0.65 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
4 |
no |
no |
PF13066 |
A0A073JZE1 |
8-71 |
nD1 |
1-70 |
70 |
e2rd1B1 |
2RD1 |
4.1.1 |
0.944 |
0.0 |
0.465 |
3.7|4.0|0 |
0.914 |
0.875 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
4 |
no |
no |
PF13066 |
A0A243C0W2 |
8-71 |
nD1 |
1-74 |
74 |
e1pnjA1 |
1PNJ |
4.1.1 |
0.898 |
0.0 |
0.449 |
4.7|4.7|1 |
0.786 |
0.925 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
4 |
no |
no |
PF13069 |
A0A076W4Y1 |
1-52 |
nD1 |
1-45 |
45 |
e3egrA1 |
3EGR |
3115.5.1 |
0.862 |
0.215 |
0.0 |
4.1|4.1|1 |
0.677 |
0.714 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
phenylacetate-CoA oxygenase subunit PaaB |
phenylacetate-CoA oxygenase subunit PaaB |
1 |
3 |
no |
no |
PF13069 |
A0A7Z1G887 |
1-52 |
nD1 |
1-45 |
45 |
e3egrA1 |
3EGR |
3115.5.1 |
0.862 |
0.219 |
0.0 |
4.2|4.2|1 |
0.677 |
0.714 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
phenylacetate-CoA oxygenase subunit PaaB |
phenylacetate-CoA oxygenase subunit PaaB |
1 |
3 |
no |
no |
PF13069 |
A0A243BUL8 |
1-52 |
nD1 |
1-45 |
45 |
e3egrA1 |
3EGR |
3115.5.1 |
0.863 |
0.216 |
0.0 |
4.2|4.2|1 |
0.677 |
0.714 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
phenylacetate-CoA oxygenase subunit PaaB |
phenylacetate-CoA oxygenase subunit PaaB |
1 |
3 |
no |
no |
PF13071 |
A0A243KX67 |
2-71 |
nD1 |
1-70 |
70 |
e7ah91L1 |
7AH9 |
192.18.1 |
0.921 |
0.0 |
0.0 |
5.5|5.5|1 |
0.729 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
MxiH-like |
MxiH-like |
3 |
0 |
no |
yes:2 |
PF13093 |
G8YLE3 |
4-312 |
nD1 |
1-95 |
95 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.941 |
0.0 |
0.0 |
5.5|5.5|1 |
0.687 |
1.301 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
4 |
0 |
no |
no |
PF13105 |
A0A073JU96 |
9-246 |
nD1 |
1-160 |
160 |
e3rkoJ1 |
3RKO |
3579.1.1 |
0.869 |
0.779 |
0.323 |
6.7|7.5|1 |
0.558 |
0.941 |
pymol |
more |
good_domain |
extended segments |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
NADH-quinone oxidoreductase subunit J |
6 |
0 |
no |
yes:5 |
PF13106 |
Q81SY1 |
34-72 |
nD1 |
11-39,51-75 |
54 |
e7c9rI1 |
7C9R |
5074.1.1 |
0.928 |
0.0 |
0.0 |
2.7|2.7|1 |
0.729 |
1.038 |
pymol |
na |
good_domain |
extended segments |
Bacterial light-harvesting complex subunits |
Bacterial light-harvesting complex subunits |
Bacterial light-harvesting complex subunits |
3 |
0 |
no |
yes:1 |
PF13107 |
A0A2S1AAV1 |
2-108 |
nD1 |
6-110 |
105 |
e3k44C1 |
3K44 |
295.1.1 |
0.853 |
0.0 |
0.0 |
4.2|4.2|1 |
0.522 |
0.861 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
5 |
no |
no |
PF13111 |
E4N2Z0 |
9-414 |
nD1 |
21-140 |
120 |
e7nmmA1 |
7NMM |
304.3.1 |
0.899 |
0.0 |
0.0 |
4.1|4.1|1 |
0.878 |
1.667 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
HMA-related |
HMA, heavy metal-associated domain |
4 |
4 |
no |
no |
PF13111 |
E4N2Z0 |
9-414 |
nD2 |
1-20,141-240,321-375 |
175 |
e5ux0D4 |
5UX0 |
304.112.1 |
0.944 |
0.0 |
0.0 |
6.5|6.6|1 |
0.903 |
1.316 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Argonaute, N-terminal domain |
Argonaute, N-terminal domain |
2 |
11 |
no |
no |
PF13111 |
D1AAS0 |
11-424 |
nD2 |
6-25,61-90,141-250,266-290,341-385 |
230 |
e6qzkA4 |
6QZK |
304.112.1 |
0.914 |
0.0 |
0.0 |
5.4|5.7|1 |
0.821 |
1.729 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Argonaute, N-terminal domain |
Argonaute, N-terminal domain |
3 |
13 |
no |
no |
PF13123 |
Q815V0 |
1-144 |
nD1 |
11-140 |
130 |
e3fssA2 |
3FSS |
220.1.1 |
0.889 |
0.0 |
0.0 |
5.2|6.2|1 |
0.942 |
1.066 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
8 |
no |
no |
PF13123 |
A0A1C3ZFR3 |
3-143 |
nD1 |
11-145 |
135 |
e4xuuB1 |
4XUU |
220.1.1 |
0.91 |
0.0 |
0.0 |
5.9|6.1|1 |
0.86 |
1.107 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
8 |
no |
no |
PF13123 |
A0A828XUI0 |
1-139 |
nD1 |
6-135 |
130 |
e1zc3D1 |
1ZC3 |
220.1.1 |
0.905 |
0.0 |
0.0 |
6.2|6.2|1 |
0.862 |
1.066 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
no |
no |
PF13130 |
Q81E98 |
17-120 |
nD1 |
31-270 |
240 |
e4eg9A1 |
4EG9 |
71.1.1 |
0.898 |
0.472 |
0.608 |
8.1|8.8|1 |
0.868 |
1.263 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
9 |
yes:out |
no |
PF13130 |
A0A249XJB4 |
9-106 |
nD1 |
16-250 |
235 |
e4bigA1 |
4BIG |
71.1.1 |
0.864 |
0.45 |
0.781 |
8.7|8.7|1 |
0.889 |
1.237 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
11 |
yes:out |
no |
PF13139 |
A0A2B4LH58 |
13-127 |
nD1 |
1-15,41-130 |
105 |
e5mdnB5 |
5MDN |
4970.1.1 |
0.903 |
0.0 |
0.0 |
4.2|4.7|0 |
1.0 |
0.778 |
pymol |
more |
good_domain |
alpha bundles |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
4 |
0 |
yes:in |
yes:3 |
PF13146 |
A0A2G6BTL7 |
19-90 |
nD1 |
6-90 |
85 |
e7c50A2 |
7C50 |
304.133.1 |
0.858 |
0.0 |
0.0 |
4.1|4.1|1 |
0.614 |
0.794 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
26 kDa periplasmic immunogenic protein |
26 kDa periplasmic immunogenic protein |
2 |
4 |
yes:in |
no |
PF13151 |
A0A1T5GLT8 |
2-145 |
nD1 |
1-100,126-150 |
125 |
e6e3aA1 |
6E3A |
237.1.1 |
0.921 |
0.414 |
0.98 |
5.1|7.9|1 |
0.766 |
0.613 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
2 |
7 |
no |
no |
PF13151 |
R7G8G1 |
5-147 |
nD1 |
1-100,131-154 |
124 |
e6e3aA1 |
6E3A |
237.1.1 |
0.916 |
0.376 |
0.98 |
5.1|8.1|1 |
0.723 |
0.608 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
2 |
7 |
no |
no |
PF13154 |
A0A7Y0TKM0 |
134-200 |
nD2 |
116-190 |
75 |
e1nuiA1 |
1NUI |
4023.1.1 |
0.861 |
0.997 |
0.967 |
4.1|5.3|1 |
0.767 |
0.573 |
pymol |
more |
good_domain |
a+b two layers |
N-terminal a+b domain in DNA primase core |
N-terminal a+b domain in DNA primase core |
N-terminal a+b domain in DNA primase core |
1 |
4 |
no |
no |
PF13166 |
A9H1U9 |
12-747 |
nD5 |
641-765 |
125 |
e6tugA1 |
6TUG |
601.7.1 |
0.919 |
0.0 |
0.0 |
9.1|9.1|1 |
0.839 |
0.887 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
no |
PF13166 |
Q8KEK5 |
10-739 |
nD3 |
216-240,296-410 |
140 |
e2d4uA1 |
2D4U |
601.4.1 |
0.92 |
0.0 |
0.0 |
7.8|7.8|1 |
0.822 |
0.972 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF13166 |
Q8KEK5 |
10-739 |
nD5 |
631-755 |
125 |
e1wwpA1 |
1WWP |
601.7.1 |
0.908 |
0.0 |
0.0 |
7.0|7.6|1 |
0.862 |
0.887 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
no |
PF13170 |
F0T1P5 |
15-313 |
nD2 |
31-315 |
285 |
e5cwcA1 |
5CWC |
159.1.2 |
0.895 |
0.0 |
0.0 |
5.1|5.1|1 |
0.51 |
3.098 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
14 |
0 |
no |
no |
PF13170 |
W6RUZ9 |
14-314 |
nD1 |
1-325 |
325 |
e5cwcA1 |
5CWC |
159.1.2 |
0.91 |
0.0 |
0.0 |
5.1|5.1|1 |
0.566 |
3.533 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
15 |
0 |
no |
no |
PF13171 |
C6D6M8 |
4-200 |
nD2 |
86-205 |
120 |
e4r24B1 |
4R24 |
101.1.9 |
0.922 |
0.0 |
0.806 |
3.7|4.2|1 |
0.79 |
1.371 |
pymol |
na |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
5 |
5 |
no |
no |
PF13171 |
A0A662ES80 |
4-201 |
nD2 |
86-205 |
120 |
e4wlwA1 |
4WLW |
101.1.9 |
0.92 |
0.894 |
0.988 |
3.6|4.3|0 |
0.583 |
1.371 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
4 |
4 |
no |
no |
PF13195 |
I3TNM3 |
39-221 |
nD1 |
41-84,131-275 |
189 |
e1e0tA1 |
1E0T |
1.1.15 |
0.914 |
0.0 |
0.0 |
3.1|3.1|1 |
0.75 |
1.909 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PK beta-barrel domain-like |
4 |
8 |
no |
no |
PF13195 |
G8B172 |
407-578 |
nD3 |
411-450,476-630 |
195 |
e5wrpA1 |
5WRP |
1.1.15 |
0.923 |
0.0 |
0.0 |
2.5|3.0|1 |
0.796 |
1.97 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PK beta-barrel domain-like |
5 |
9 |
no |
no |
PF13195 |
B9TC38 |
36-208 |
nD1 |
41-80,106-260 |
195 |
e5wrpA1 |
5WRP |
1.1.15 |
0.888 |
0.0 |
0.0 |
2.4|3.0|1 |
0.797 |
1.97 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PK beta-barrel domain-like |
5 |
9 |
no |
no |
PF13196 |
A0A357A2P3 |
19-155 |
nD1 |
16-255 |
240 |
e5v8cA1 |
5V8C |
268.2.1 |
0.912 |
0.968 |
0.967 |
7.3|7.3|1 |
0.684 |
0.882 |
pymol |
more |
good_domain |
a+b two layers |
Sterol carrier protein-like |
LytR-Cps2A-Psr (LCP) enzymes |
LytR-Cps2A-Psr (LCP) enzymes |
8 |
6 |
no |
no |
PF13203 |
Q28SA4 |
2-273 |
nD1 |
1-220 |
220 |
e3c37A1 |
3C37 |
2498.1.1 |
0.909 |
0.931 |
0.959 |
4.1|4.2|1 |
0.431 |
0.876 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
10 |
3 |
no |
no |
PF13208 |
D6ZZA5 |
347-548 |
nD3 |
341-490,586-595 |
160 |
e5h78B1 |
5H78 |
109.3.1 |
0.935 |
0.0 |
0.0 |
6.3|6.3|1 |
0.45 |
0.804 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
4 |
5 |
yes:out |
yes:out |
PF13210 |
A0A7V7S465 |
49-242 |
nD1 |
1-135 |
135 |
e6n63A1 |
6N63 |
150.1.1 |
0.853 |
0.0 |
0.0 |
5.6|5.6|1 |
0.631 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
6 |
0 |
no |
yes:4 |
PF13210 |
A0A2C2CC13 |
49-242 |
nD1 |
1-135,221-250 |
165 |
e2lseA1 |
2LSE |
633.12.1 |
0.88 |
0.0 |
0.0 |
5.1|6.6|0 |
0.92 |
1.875 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Ta0600-like |
Ta0600-like |
7 |
0 |
no |
yes:5 |
PF13212 |
Q81C40 |
63-238 |
nD1 |
6-245 |
240 |
e5wwoA1 |
5WWO |
109.4.1 |
0.937 |
0.0 |
0.537 |
7.6|9.1|1 |
0.715 |
0.839 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
12 |
1 |
no |
no |
PF13218 |
A0A6L7H715 |
17-339 |
nD1 |
6-170 |
165 |
e2zfdB1 |
2ZFD |
331.4.1 |
0.922 |
0.0 |
0.0 |
7.0|7.0|0 |
0.91 |
1.387 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
5 |
8 |
no |
no |
PF13218 |
Q81GW3 |
17-339 |
nD1 |
6-170 |
165 |
e2zfdB1 |
2ZFD |
331.4.1 |
0.921 |
0.0 |
0.0 |
6.9|6.9|0 |
0.908 |
1.387 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
5 |
8 |
no |
no |
PF13218 |
M1SAU1 |
16-337 |
nD1 |
6-170 |
165 |
e5wi2B1 |
5WI2 |
331.4.1 |
0.907 |
0.0 |
0.0 |
7.2|7.2|1 |
0.94 |
1.387 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
5 |
7 |
no |
no |
PF13222 |
Q81D55 |
54-195 |
nD2 |
96-195 |
100 |
e3ux3B2 |
3UX3 |
327.6.1 |
0.944 |
0.0 |
0.0 |
7.0|7.5|0 |
0.883 |
1.01 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Fe-S cluster assembly (FSCA) domain-like |
Fe-S cluster assembly (FSCA) domain-like |
3 |
3 |
yes:out |
no |
PF13222 |
C3AMJ4 |
60-201 |
nD1 |
36-100 |
65 |
e3af5A2 |
3AF5 |
327.11.1 |
0.879 |
0.0 |
0.0 |
7.6|7.7|0 |
0.866 |
0.726 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Prokaryotic type KH domain (KH-domain type II) |
2 |
3 |
yes:out |
no |
PF13222 |
A0A5D4NS34 |
93-230 |
nD3 |
136-238 |
103 |
e6qfjA1 |
6QFJ |
327.7.1 |
0.893 |
0.0 |
0.0 |
8.0|8.0|1 |
0.926 |
1.226 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
4 |
5 |
no |
no |
PF13224 |
A0A800DJ76 |
230-389 |
nD2 |
311-395 |
85 |
e1fnnA2 |
1FNN |
148.1.3 |
0.902 |
0.0 |
0.0 |
3.3|3.3|1 |
0.769 |
0.914 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
0 |
no |
no |
PF13225 |
A0A2P6V245 |
56-139 |
nD1 |
1-135 |
135 |
e5husA2 |
5HUS |
3012.1.1 |
0.885 |
0.0 |
0.0 |
3.4|5.8|0 |
0.923 |
1.35 |
pymol |
more |
good_domain |
a+b two layers |
Cof C2 cap domain |
Cof C2 cap domain |
Cof C2 cap domain |
5 |
4 |
no |
no |
PF13227 |
A0A5W4TNI8 |
33-79 |
nD1 |
1-70 |
70 |
e6t9iF1 |
6T9I |
148.1.1 |
0.894 |
0.0 |
0.0 |
2.3|2.3|1 |
0.743 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
4 |
0 |
no |
no |
PF13236 |
C3ZN32 |
286-506 |
nD3 |
286-500,526-550,646-670 |
265 |
e6pwdA1 |
6PWD |
206.1.1 |
0.898 |
0.0 |
0.0 |
6.0|6.0|1 |
0.693 |
0.88 |
pymol |
more |
good_domain |
a+b complex topology |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase |
8 |
9 |
no |
no |
PF13248 |
R6G881 |
200-226 |
nD3 |
201-230 |
30 |
e2lcqA2 |
2LCQ |
375.1.1 |
0.915 |
0.96 |
0.97 |
0.0|2.8|1 |
0.682 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
yes:out |
yes:out |
PF13255 |
K0G1M1 |
9-91 |
nD1 |
6-100 |
95 |
e4jl3C1 |
4JL3 |
101.1.1 |
0.863 |
0.0 |
0.0 |
2.4|2.9|0 |
0.789 |
1.301 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
6 |
0 |
no |
no |
PF13256 |
A0A6L8PBX0 |
28-152 |
nD1 |
51-180 |
130 |
e5j1gB1 |
5J1G |
604.1.1 |
0.948 |
0.0 |
0.0 |
10.3|11.2|0 |
0.986 |
1.182 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
yes:out |
no |
PF13256 |
C3AJ18 |
5-125 |
nD1 |
31-155 |
125 |
e6tb3BW1 |
6TB3 |
603.1.1 |
0.923 |
0.4 |
0.242 |
9.6|9.6|1 |
0.868 |
1.19 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
no |
PF13272 |
Q1MNP7 |
20-124 |
nD1 |
16-124 |
109 |
e4biwB1 |
4BIW |
605.1.1 |
0.938 |
0.0 |
0.0 |
4.6|5.0|0 |
0.911 |
1.493 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
2 |
1 |
no |
yes:2 |
PF13284 |
A0A1W9KCZ1 |
3-42 |
nD1 |
1-65 |
65 |
e5is2A3 |
5IS2 |
304.8.1 |
0.911 |
1.0 |
0.0 |
7.9|7.9|1 |
0.76 |
0.774 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
4 |
no |
no |
PF13284 |
A0A536XX01 |
3-43 |
nD1 |
1-65 |
65 |
e5is2A3 |
5IS2 |
304.8.1 |
0.853 |
1.0 |
0.0 |
2.6|2.8|0 |
0.734 |
0.774 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
4 |
no |
no |
PF13285 |
A0A0B0HSQ6 |
257-415 |
nD2 |
346-415 |
70 |
e6sffA1 |
6SFF |
11.1.1 |
0.893 |
0.0 |
0.0 |
5.6|5.8|1 |
0.743 |
0.648 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
5 |
yes:out |
no |
PF13309 |
A0A1H4VZU0 |
144-205 |
nD2 |
141-205 |
65 |
e6t1fC3 |
6T1F |
101.1.1 |
0.921 |
0.843 |
0.956 |
5.0|5.0|1 |
0.909 |
0.89 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF13309 |
A0A1H8T6W4 |
147-206 |
nD2 |
141-205 |
65 |
e5mmcA1 |
5MMC |
3546.1.1 |
0.935 |
0.0 |
0.0 |
4.8|4.8|0 |
0.775 |
0.929 |
pymol |
more |
good_domain |
alpha arrays |
Peroxisomal biogenesis factor 14 N-terminal domain |
Peroxisomal biogenesis factor 14 N-terminal domain |
Peroxisomal biogenesis factor 14 N-terminal domain |
4 |
0 |
no |
no |
PF13315 |
A0A494YWX7 |
57-231 |
nD2 |
146-245 |
100 |
e5v77A1 |
5V77 |
3504.4.1 |
0.876 |
0.275 |
0.503 |
7.5|7.5|1 |
0.771 |
0.952 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
An uncharacterized protein |
An uncharacterized protein |
1 |
7 |
no |
no |
PF13316 |
A0A516V8J3 |
3-91 |
nD1 |
1-90 |
90 |
e1x65A1 |
1X65 |
2.1.1 |
0.886 |
0.0 |
0.292 |
3.3|5.6|0 |
0.854 |
0.865 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
6 |
no |
no |
PF13317 |
Q1LH20 |
17-243 |
nD3 |
156-220 |
65 |
e4ji8T1 |
4JI8 |
604.9.1 |
0.903 |
0.0 |
0.0 |
8.4|8.4|1 |
0.759 |
0.756 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
3 |
0 |
no |
no |
PF13317 |
Q0K4N9 |
17-243 |
nD3 |
156-220 |
65 |
e5o5jT1 |
5O5J |
604.9.1 |
0.878 |
0.0 |
0.0 |
8.2|8.2|1 |
0.777 |
0.756 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
3 |
0 |
no |
no |
PF13317 |
Q13VI8 |
16-241 |
nD3 |
156-220 |
65 |
e6w6pt1 |
6W6P |
604.9.1 |
0.884 |
0.0 |
0.0 |
7.4|8.9|1 |
0.774 |
0.756 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
3 |
0 |
no |
no |
PF13319 |
A3PB79 |
2-83 |
nD1 |
6-35,41-85 |
75 |
e3f1iS1 |
3F1I |
604.6.1 |
0.861 |
0.477 |
0.455 |
0.0|3.5|0 |
0.662 |
0.789 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
GAT-like domain |
GAT-like domain |
5 |
1 |
no |
no |
PF13321 |
A0A5C5SXH4 |
12-315 |
nD1 |
1-130,151-260 |
240 |
e7d7qA1 |
7D7Q |
5001.1.1 |
0.946 |
0.292 |
0.0 |
9.8|11.5|1 |
0.825 |
0.841 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
8 |
0 |
no |
yes:7 |
PF13322 |
P0C6F0 |
392-565 |
nD4 |
426-485,526-730,891-915 |
290 |
e5kdwB2 |
5KDW |
7603.1.1 |
0.938 |
0.964 |
0.976 |
14.3|14.3|1 |
0.871 |
1.295 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
6 |
15 |
yes:out |
no |
PF13322 |
A0A7Z7PH78 |
38-206 |
nD1 |
66-125,166-380,516-535 |
295 |
e5kdwB2 |
5KDW |
7603.1.1 |
0.872 |
0.0 |
0.979 |
15.9|15.9|1 |
0.897 |
1.317 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
6 |
15 |
no |
no |
PF13322 |
A0A376NV04 |
38-206 |
nD1 |
66-125,166-380,516-535 |
295 |
e5kdwB2 |
5KDW |
7603.1.1 |
0.871 |
0.0 |
0.979 |
15.8|15.8|1 |
0.906 |
1.317 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
Immunomodulating metalloprotease IMPa N-terminal domain |
6 |
14 |
no |
no |
PF13332 |
A0A5Q5A436 |
196-369 |
nD2 |
6-20,66-110,211-265,311-360,401-450,496-530 |
250 |
e2odlA1 |
2ODL |
207.2.1 |
0.922 |
0.0 |
0.0 |
19.3|19.5|1 |
0.744 |
0.658 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
21 |
no |
no |
PF13332 |
Q6KDD4 |
196-369 |
nD2 |
1-20,66-110,211-265,311-360,401-450,496-530 |
255 |
e2odlA1 |
2ODL |
207.2.1 |
0.907 |
0.0 |
0.0 |
18.1|18.1|1 |
0.75 |
0.671 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
22 |
no |
no |
PF13340 |
A0A1F2P8I0 |
6-77 |
nD1 |
6-75 |
70 |
e7c4pB1 |
7C4P |
101.1.1 |
0.917 |
0.0 |
0.068 |
3.5|3.7|0 |
0.896 |
0.959 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF13349 |
C8WPF1 |
60-308 |
nD2 |
36-310 |
275 |
e3petA1 |
3PET |
207.2.1 |
0.927 |
0.996 |
0.998 |
17.2|19.0|1 |
0.927 |
0.724 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
15 |
yes:out |
no |
PF13349 |
R6GYY0 |
66-321 |
nD2 |
56-125,151-320 |
240 |
e3lycG1 |
3LYC |
207.2.1 |
0.884 |
0.996 |
0.997 |
14.0|14.2|1 |
0.793 |
0.632 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
22 |
yes:out |
no |
PF13349 |
Q65F42 |
48-287 |
nD1 |
41-285 |
245 |
e3lycG1 |
3LYC |
207.2.1 |
0.872 |
0.997 |
0.998 |
16.6|17.3|1 |
0.743 |
0.645 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
1 |
17 |
yes:out |
no |
PF13359 |
C6WJB8 |
102-249 |
nD2 |
86-240 |
155 |
e6rwoA3 |
6RWO |
2484.1.1 |
0.946 |
0.0 |
0.284 |
6.9|7.7|1 |
0.825 |
0.791 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
6 |
5 |
no |
no |
PF13376 |
D4Z3Y7 |
137-195 |
nD2 |
136-200 |
65 |
e6gv5A2 |
6GV5 |
632.2.1 |
0.892 |
0.0 |
0.0 |
3.9|3.9|1 |
0.85 |
1.074 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
4 |
0 |
no |
no |
PF13386 |
A7I322 |
8-211 |
nD1 |
6-215 |
210 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.913 |
0.998 |
0.999 |
7.0|7.4|0 |
0.811 |
1.014 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF13386 |
Q082F2 |
8-219 |
nD1 |
6-105,136-225 |
190 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.945 |
0.998 |
0.998 |
6.0|6.4|0 |
0.653 |
0.918 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF13387 |
Q2YJR6 |
154-308 |
nD2 |
121-340 |
220 |
e2if6A1 |
2IF6 |
219.1.1 |
0.932 |
0.0 |
0.339 |
7.0|7.0|1 |
0.746 |
0.982 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
9 |
no |
yes:out |
PF13387 |
E1VQX8 |
155-327 |
nD1 |
51-340 |
290 |
e2if6A1 |
2IF6 |
219.1.1 |
0.882 |
0.56 |
0.455 |
7.8|7.8|1 |
0.866 |
1.295 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
11 |
9 |
yes:out |
no |
PF13388 |
A2ELB6 |
235-653 |
nD4 |
196-270,281-305,311-350 |
140 |
e5lpnB1 |
5LPN |
192.29.1 |
0.943 |
0.0 |
0.0 |
5.7|7.6|0 |
0.755 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF13403 |
A0A257PXF9 |
4-140 |
nD1 |
1-140 |
140 |
e6zgqB1 |
6ZGQ |
69.1.1 |
0.933 |
0.975 |
0.51 |
14.5|14.9|1 |
0.83 |
0.854 |
pymol |
more |
good_domain |
beta complex topology |
Hedgehog/intein |
Hedgehog/intein |
Hint |
3 |
12 |
no |
no |
PF13403 |
A0A5C5GHS5 |
34-180 |
nD1 |
1-195 |
195 |
e1gppA1 |
1GPP |
69.1.1 |
0.92 |
0.958 |
0.281 |
7.5|11.1|1 |
0.814 |
1.189 |
pymol |
more |
good_domain |
beta complex topology |
Hedgehog/intein |
Hedgehog/intein |
Hint |
4 |
15 |
no |
no |
PF13422 |
D8LC32 |
681-775 |
nD2 |
666-775 |
110 |
e2zdiC1 |
2ZDI |
192.2.1 |
0.946 |
0.0 |
0.0 |
5.6|5.6|1 |
0.728 |
1.028 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
3 |
0 |
no |
no |
PF13430 |
A0A7H5EYE4 |
22-122 |
nD1 |
6-125,131-165 |
155 |
e2lp4A1 |
2LP4 |
601.3.1 |
0.938 |
0.0 |
0.0 |
7.6|7.6|1 |
0.874 |
1.26 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine-containing phosphotransfer domain, HPT domain |
Histidine-containing phosphotransfer domain, HPT domain |
6 |
1 |
no |
yes:3 |
PF13446 |
J7S3Q7 |
573-630 |
nD3 |
501-715 |
215 |
e7d63RD1 |
7D63 |
109.4.1 |
0.873 |
0.0 |
0.0 |
4.7|4.9|1 |
0.369 |
0.752 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
12 |
0 |
no |
no |
PF13449 |
S3NK77 |
38-355 |
nD1 |
1-380 |
380 |
e3qqzA1 |
3QQZ |
5.1.3 |
0.861 |
0.968 |
0.983 |
18.2|19.2|0 |
0.949 |
1.098 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
0 |
20 |
no |
no |
PF13451 |
A0A0U3WB73 |
202-243 |
nD2 |
201-240 |
40 |
e2gmgA3 |
2GMG |
375.1.1 |
0.919 |
0.925 |
0.861 |
0.0|2.4|0 |
0.794 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
no |
PF13453 |
B8FEF9 |
2-43 |
nD1 |
1-45 |
45 |
e7oqyY2 |
7OQY |
375.1.1 |
0.946 |
0.992 |
0.972 |
0.0|3.3|1 |
0.923 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF13455 |
A6FAR2 |
381-457 |
nD5 |
361-470 |
110 |
e6seiA1 |
6SEI |
821.1.1 |
0.925 |
0.502 |
0.955 |
7.0|7.0|1 |
0.64 |
0.905 |
pymol |
na |
good_domain |
a+b three layers |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
GIY-YIG endonuclease |
4 |
5 |
no |
yes:out |
PF13464 |
A0A399EL39 |
2-68 |
nD1 |
1-70 |
70 |
e3fcgA1 |
3FCG |
11.1.1 |
0.871 |
0.549 |
0.883 |
4.5|4.7|1 |
0.72 |
0.648 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
7 |
no |
no |
PF13471 |
B4RER1 |
106-218 |
nD2 |
98-220 |
123 |
e3kd4A2 |
3KD4 |
219.1.1 |
0.942 |
0.672 |
0.976 |
4.8|5.6|1 |
0.66 |
0.549 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
4 |
3 |
no |
no |
PF13494 |
Q8AA71 |
11-97 |
nD1 |
26-125 |
100 |
e6p18Q1 |
6P18 |
101.1.1 |
0.914 |
0.0 |
0.0 |
3.5|4.2|0 |
0.812 |
1.37 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
3 |
no |
no |
PF13494 |
A0A174VD62 |
2-85 |
nD1 |
16-120 |
105 |
e4za6B2 |
4ZA6 |
101.1.1 |
0.947 |
0.0 |
0.0 |
4.0|4.2|0 |
0.907 |
1.438 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
3 |
no |
no |
PF13497 |
A0A1C7H4E3 |
5-264 |
nD2 |
167-270 |
104 |
e3oajB3 |
3OAJ |
211.1.1 |
0.886 |
0.0 |
0.0 |
3.9|3.9|1 |
0.818 |
1.529 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
6 |
no |
no |
PF13497 |
R9HIX4 |
5-264 |
nD2 |
166-270 |
105 |
e3vb0A3 |
3VB0 |
211.1.1 |
0.902 |
0.0 |
0.0 |
2.2|4.3|1 |
0.626 |
1.544 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
6 |
no |
no |
PF13497 |
A0A5M5ZS96 |
5-264 |
nD2 |
166-270 |
105 |
e3oajB3 |
3OAJ |
211.1.1 |
0.884 |
0.0 |
0.0 |
4.3|4.3|1 |
0.825 |
1.544 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
6 |
no |
no |
PF13498 |
A0A0F5JBQ2 |
3-214 |
nD1 |
136-200 |
65 |
e4wt3A1 |
4WT3 |
101.1.1 |
0.945 |
0.0 |
0.0 |
3.3|4.0|0 |
0.778 |
0.89 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
1 |
no |
yes:out |
PF13498 |
A6KY66 |
2-218 |
nD2 |
131-195 |
65 |
e4wt3A1 |
4WT3 |
101.1.1 |
0.916 |
0.0 |
0.0 |
3.6|3.6|1 |
0.757 |
0.89 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
1 |
no |
no |
PF13498 |
Q8A4J2 |
3-221 |
nD1 |
136-200 |
65 |
e2oy9A1 |
2OY9 |
4296.1.1 |
0.92 |
0.35 |
0.186 |
3.6|3.6|1 |
0.639 |
0.765 |
pymol |
more |
good_domain |
alpha arrays |
BH2638-like |
BH2638-like |
BH2638-like |
3 |
1 |
no |
no |
PF13542 |
C8X7Q7 |
89-138 |
nD1 |
11-145 |
135 |
e5t6bB1 |
5T6B |
375.1.1 |
0.917 |
0.0 |
0.881 |
2.7|3.1|0 |
0.948 |
2.411 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
3 |
6 |
no |
no |
PF13562 |
A0A0Q0ZCT7 |
3-151 |
nD1 |
1-150 |
150 |
e4q7cB1 |
4Q7C |
7516.1.1 |
0.871 |
0.929 |
0.975 |
5.9|9.9|1 |
0.741 |
0.566 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
Nucleotide-diphospho-sugar transferases |
4 |
7 |
no |
no |
PF13564 |
D1BYA3 |
7-111 |
nD1 |
1-130 |
130 |
e5tcxA2 |
5TCX |
174.1.1 |
0.862 |
0.0 |
0.0 |
9.3|9.7|1 |
0.903 |
0.89 |
pymol |
na |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF13569 |
A0A3A9BFS1 |
670-846 |
nD6 |
686-925 |
240 |
e2r5xB1 |
2R5X |
331.12.1 |
0.948 |
0.0 |
0.0 |
8.4|8.4|1 |
0.795 |
2.069 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
YugN-like |
YugN-like |
6 |
12 |
no |
no |
PF13571 |
A0A0Q7FCW7 |
8-97 |
nD1 |
6-95 |
90 |
e3fd9A3 |
3FD9 |
192.20.1 |
0.859 |
0.0 |
0.0 |
5.2|5.2|1 |
0.931 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
helical hairpin domain in transcriptional anti-activator ExsD |
helical hairpin domain in transcriptional anti-activator ExsD |
2 |
1 |
no |
yes:2 |
PF13571 |
A0A6M2C781 |
8-98 |
nD1 |
6-90 |
85 |
e3fd9A3 |
3FD9 |
192.20.1 |
0.862 |
0.0 |
0.0 |
5.2|5.2|1 |
0.931 |
1.181 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
helical hairpin domain in transcriptional anti-activator ExsD |
helical hairpin domain in transcriptional anti-activator ExsD |
2 |
1 |
no |
yes:2 |
PF13571 |
A0A0Q4S4M9 |
8-98 |
nD1 |
16-90 |
75 |
e3fd9A3 |
3FD9 |
192.20.1 |
0.871 |
0.0 |
0.0 |
5.2|5.2|0 |
0.917 |
1.042 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
helical hairpin domain in transcriptional anti-activator ExsD |
helical hairpin domain in transcriptional anti-activator ExsD |
2 |
1 |
no |
yes:2 |
PF13595 |
Q89YF2 |
40-293 |
nD2 |
141-290 |
150 |
e1p4uA1 |
1P4U |
11.1.1 |
0.935 |
0.0 |
0.825 |
7.5|8.9|0 |
0.912 |
1.389 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
8 |
yes:out |
no |
PF13595 |
F0S610 |
43-292 |
nD2 |
151-290 |
140 |
e1kyfA1 |
1KYF |
11.1.1 |
0.949 |
0.0 |
0.868 |
7.9|9.2|0 |
0.968 |
1.296 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
8 |
yes:out |
no |
PF13595 |
C6W392 |
33-272 |
nD2 |
131-270 |
140 |
e1p4uA1 |
1P4U |
11.1.1 |
0.947 |
0.0 |
0.856 |
8.0|9.0|0 |
0.915 |
1.296 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
9 |
yes:out |
no |
PF13605 |
R5AW74 |
63-114 |
nD1 |
86-260 |
175 |
e6egcA1 |
6EGC |
192.29.1 |
0.931 |
0.0 |
0.0 |
8.7|8.7|1 |
0.836 |
2.303 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
yes:out |
PF13605 |
Q8A5E5 |
3-56 |
nD1 |
26-185 |
160 |
e2lp4A1 |
2LP4 |
601.3.1 |
0.931 |
0.0 |
0.0 |
8.7|8.9|0 |
0.91 |
1.301 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine-containing phosphotransfer domain, HPT domain |
Histidine-containing phosphotransfer domain, HPT domain |
5 |
0 |
yes:out |
no |
PF13650 |
B7G487 |
99-206 |
nD1 |
76-409 |
334 |
e3aprE1 |
3APR |
1.1.1 |
0.878 |
0.979 |
0.994 |
16.5|16.5|1 |
0.775 |
1.876 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
acid protease |
4 |
24 |
yes:out |
no |
PF13664 |
A7SLY7 |
45-147 |
nD1 |
26-150,176-213 |
163 |
e6egcA1 |
6EGC |
192.29.1 |
0.932 |
0.0 |
0.0 |
13.4|13.4|1 |
0.962 |
2.145 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
1 |
yes:out |
yes:4 |
PF13664 |
A0A2S6QDQ0 |
8-99 |
nD1 |
1-129 |
129 |
e6egcA1 |
6EGC |
192.29.1 |
0.939 |
0.0 |
0.0 |
15.0|15.0|1 |
0.882 |
1.697 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF13664 |
A0A222F9Z2 |
8-99 |
nD1 |
1-129 |
129 |
e6egcA1 |
6EGC |
192.29.1 |
0.941 |
0.0 |
0.0 |
15.0|15.0|1 |
0.889 |
1.697 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
yes:in |
yes:3 |
PF13665 |
G4T2Y2 |
21-133 |
nD1 |
6-145 |
140 |
e4jivD1 |
4JIV |
3174.3.1 |
0.912 |
0.223 |
0.099 |
7.8|7.8|1 |
0.933 |
1.505 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L14-like |
PAAR-repeat protein |
PAAR-repeat protein |
1 |
8 |
no |
no |
PF13665 |
A0A1H6R541 |
22-131 |
nD1 |
6-139 |
134 |
e4jivD1 |
4JIV |
3174.3.1 |
0.907 |
0.27 |
0.128 |
4.5|4.5|1 |
0.908 |
1.441 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L14-like |
PAAR-repeat protein |
PAAR-repeat protein |
1 |
8 |
no |
no |
PF13695 |
A0A668VS96 |
48-153 |
nD1 |
1-120,146-155 |
130 |
e3gm5A4 |
3GM5 |
211.1.1 |
0.885 |
0.0 |
0.0 |
3.0|3.0|1 |
0.853 |
1.912 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
3 |
5 |
no |
no |
PF13705 |
B1H1M0 |
13-506 |
nD1 |
1-10,66-185 |
130 |
e3ay5A1 |
3AY5 |
601.1.3 |
0.909 |
0.0 |
0.0 |
7.0|7.0|1 |
0.831 |
0.81 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
A middle domain of Talin 1 |
5 |
0 |
no |
yes:4 |
PF13705 |
W5MRG3 |
13-513 |
nD1 |
66-95,121-190 |
100 |
e1dowA1 |
1DOW |
601.1.1 |
0.861 |
0.0 |
0.0 |
7.3|7.3|1 |
0.697 |
0.763 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
4 |
0 |
no |
yes:4 |
PF13705 |
T1HPT5 |
8-548 |
nD2 |
101-240 |
140 |
e4akkA2 |
4AKK |
601.4.1 |
0.895 |
0.0 |
0.0 |
7.4|7.4|1 |
0.799 |
0.972 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
5 |
0 |
no |
yes:3 |
PF13707 |
I0KHH0 |
45-235 |
nD2 |
41-240 |
200 |
e1c41B1 |
1C41 |
2007.1.13 |
0.94 |
0.0 |
0.0 |
7.2|7.4|1 |
0.798 |
1.299 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Lumazine synthase |
7 |
7 |
no |
no |
PF13707 |
K0KDV0 |
24-200 |
nD1 |
21-200 |
180 |
e4y7kA1 |
4Y7K |
2007.1.13 |
0.947 |
0.0 |
0.0 |
7.7|8.7|1 |
0.818 |
1.169 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Lumazine synthase |
7 |
5 |
no |
no |
PF13707 |
A3UA49 |
48-239 |
nD1 |
46-255 |
210 |
e1c2yS1 |
1C2Y |
2007.1.13 |
0.933 |
0.0 |
0.0 |
6.8|7.3|1 |
0.808 |
1.364 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Lumazine synthase |
7 |
7 |
no |
no |
PF13708 |
Q32HN4 |
87-276 |
nD2 |
146-275 |
130 |
e3a2kA3 |
3A2K |
3018.1.1 |
0.897 |
0.0 |
0.0 |
4.5|4.5|1 |
0.885 |
1.477 |
pymol |
more |
good_domain |
a+b two layers |
MesJ substrate recognition domain-like |
MesJ substrate recognition domain-like |
MesJ substrate recognition domain-like |
4 |
6 |
no |
no |
PF13731 |
F9ULM2 |
40-243 |
nD1 |
56-240 |
185 |
e6fjyB1 |
6FJY |
11.1.5 |
0.903 |
0.0 |
0.434 |
4.2|5.1|1 |
0.903 |
1.201 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
11 |
yes:out |
no |
PF13731 |
Q9CFA1 |
29-249 |
nD1 |
51-245 |
195 |
e3jwnG1 |
3JWN |
11.1.5 |
0.869 |
0.0 |
0.545 |
5.3|5.3|1 |
0.869 |
1.266 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
0 |
13 |
yes:out |
no |
PF13754 |
R5U481 |
1-105 |
nD1 |
1-70 |
70 |
e4aefA1 |
4AEF |
11.1.1 |
0.893 |
0.0 |
0.924 |
4.9|4.9|1 |
0.81 |
0.648 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
5 |
no |
no |
PF13754 |
D4MVQ2 |
1-92 |
nD1 |
1-70 |
70 |
e3pddA3 |
3PDD |
11.1.1 |
0.893 |
0.818 |
0.944 |
4.3|5.6|1 |
0.67 |
0.648 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
4 |
no |
no |
PF13761 |
D4YXX5 |
15-194 |
nD1 |
1-195 |
195 |
e5yvfA1 |
5YVF |
9.1.1 |
0.928 |
0.0 |
0.0 |
10.4|10.4|1 |
0.932 |
1.275 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
11 |
no |
no |
PF13761 |
A0A3B8IH38 |
15-200 |
nD1 |
1-220 |
220 |
e2o62A1 |
2O62 |
9.1.1 |
0.925 |
0.0 |
0.0 |
8.9|9.7|1 |
0.96 |
1.438 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
11 |
no |
no |
PF13763 |
A5FXA1 |
7-90 |
nD1 |
31-90 |
60 |
e4b6xA1 |
4B6X |
192.1.1 |
0.851 |
0.0 |
0.0 |
4.3|4.3|1 |
0.712 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
2 |
2 |
no |
no |
PF13763 |
Q11E06 |
35-108 |
nD1 |
51-110 |
60 |
e4b6xA1 |
4B6X |
192.1.1 |
0.89 |
0.0 |
0.0 |
6.4|6.4|0 |
0.693 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
2 |
2 |
no |
no |
PF13764 |
X6R960 |
74-870 |
nD4 |
561-590,611-625,646-890 |
290 |
e1dceA2 |
1DCE |
109.4.1 |
0.899 |
0.0 |
0.0 |
5.3|6.0|1 |
0.373 |
1.014 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
12 |
2 |
no |
no |
PF13779 |
Q6N0M3 |
22-853 |
nD2 |
201-305 |
105 |
e6hpdA5 |
6HPD |
11.1.1 |
0.929 |
0.0 |
0.0 |
4.8|5.3|1 |
0.821 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
6 |
no |
yes:out |
PF13779 |
G7ZI85 |
24-907 |
nD6 |
546-660 |
115 |
e3t6gD1 |
3T6G |
601.1.1 |
0.922 |
0.0 |
0.0 |
10.6|10.6|1 |
0.834 |
0.878 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
0 |
no |
yes:out |
PF13779 |
G8ARR4 |
24-867 |
nD5 |
421-510 |
90 |
e7a73A2 |
7A73 |
601.18.1 |
0.895 |
0.0 |
0.0 |
9.3|9.3|1 |
0.827 |
0.703 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Oxygen-evolving enhancer protein 3 |
Oxygen-evolving enhancer protein 3 |
4 |
0 |
no |
yes:out |
PF13779 |
G8ARR4 |
24-867 |
nD6 |
511-620 |
110 |
e3t6gD1 |
3T6G |
601.1.1 |
0.921 |
0.0 |
0.0 |
10.4|10.4|1 |
0.796 |
0.84 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
4 |
0 |
no |
yes:out |
PF13781 |
S6GFF6 |
15-115 |
nD1 |
6-120 |
115 |
e5tcxA2 |
5TCX |
174.1.1 |
0.872 |
0.0 |
0.0 |
9.0|9.0|1 |
0.831 |
0.788 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
yes:in |
yes:3 |
PF13782 |
B7GKG9 |
27-135 |
nD1 |
6-105 |
100 |
e1q6hA1 |
1Q6H |
3405.1.1 |
0.945 |
0.0 |
0.0 |
4.5|4.5|1 |
0.81 |
1.25 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
FkpA dimerization domain-like |
FkpA dimerization domain-like |
FkpA dimerization domain-like |
4 |
0 |
no |
yes:3 |
PF13782 |
A0A096BK93 |
26-134 |
nD1 |
6-105 |
100 |
e1q6hA1 |
1Q6H |
3405.1.1 |
0.945 |
0.0 |
0.0 |
6.2|6.2|1 |
0.788 |
1.25 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
FkpA dimerization domain-like |
FkpA dimerization domain-like |
FkpA dimerization domain-like |
4 |
0 |
no |
yes:3 |
PF13783 |
R6DMM3 |
4-64 |
nD1 |
1-65 |
65 |
e1j5uA2 |
1J5U |
256.1.1 |
0.906 |
0.0 |
0.0 |
5.5|5.8|0 |
0.94 |
0.963 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF13785 |
A0A5M7BT41 |
62-194 |
nD2 |
51-200 |
150 |
e3oyyA3 |
3OYY |
4.1.1 |
0.946 |
0.669 |
0.807 |
5.9|6.0|1 |
0.927 |
1.875 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
10 |
no |
yes:out |
PF13785 |
K2EN32 |
11-142 |
nD1 |
1-145 |
145 |
e3oyyA3 |
3OYY |
4.1.1 |
0.877 |
0.762 |
0.871 |
3.6|4.0|1 |
0.832 |
1.812 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
9 |
no |
no |
PF13790 |
A0A1V3G6Q3 |
1-35 |
nD1 |
1-35 |
35 |
e7oqyP1 |
7OQY |
375.1.1 |
0.926 |
0.963 |
0.962 |
0.0|3.2|0 |
0.688 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF13791 |
W4BGK0 |
21-175 |
nD1 |
16-60,87-180 |
139 |
e3whiA2 |
3WHI |
304.7.1 |
0.887 |
0.0 |
0.0 |
5.2|5.2|1 |
0.9 |
1.495 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Protease propeptides/inhibitors |
Protease propeptides/inhibitors |
4 |
6 |
no |
no |
PF13795 |
A0A0R2SZV2 |
7-160 |
nD1 |
1-195 |
195 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.883 |
0.977 |
0.978 |
6.9|8.2|0 |
0.671 |
0.942 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF13795 |
C0BNL6 |
7-160 |
nD1 |
1-195 |
195 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.876 |
0.976 |
0.978 |
6.9|8.1|0 |
0.689 |
0.942 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF13795 |
A0A6L9F0A5 |
7-162 |
nD1 |
1-190 |
190 |
e5vkvA1 |
5VKV |
1079.1.1 |
0.873 |
0.977 |
0.978 |
7.2|9.0|0 |
0.658 |
0.918 |
pymol |
more |
good_domain |
alpha complex topology |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
Transmembrane reductase CcdA |
7 |
0 |
no |
yes:6 |
PF13797 |
N0B4F4 |
7-89 |
nD1 |
11-75 |
65 |
e5lnkg1 |
5LNK |
1128.1.1 |
0.87 |
0.0 |
0.0 |
3.2|3.2|0 |
0.674 |
0.653 |
pymol |
more |
good_domain |
alpha bundles |
LYR protein |
LYR protein |
LYR protein |
4 |
0 |
no |
no |
PF13797 |
A0A1H9BVZ1 |
9-88 |
nD1 |
6-90 |
85 |
e3ucsB1 |
3UCS |
101.1.9 |
0.901 |
0.0 |
0.0 |
3.3|3.3|1 |
0.636 |
0.971 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
4 |
2 |
no |
no |
PF13799 |
K0FLW2 |
15-86 |
nD1 |
1-89 |
89 |
e4l3aA2 |
4L3A |
11.1.1 |
0.86 |
0.0 |
0.0 |
4.0|4.2|0 |
0.5 |
0.824 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
6 |
yes:in |
no |
PF13799 |
C3GIX5 |
15-86 |
nD1 |
1-89 |
89 |
e4l3aA2 |
4L3A |
11.1.1 |
0.86 |
0.0 |
0.0 |
4.0|4.2|0 |
0.5 |
0.824 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
6 |
no |
no |
PF13799 |
C2VM79 |
15-86 |
nD1 |
1-89 |
89 |
e4l3aA2 |
4L3A |
11.1.1 |
0.86 |
0.0 |
0.0 |
4.1|4.2|0 |
0.508 |
0.824 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
6 |
yes:in |
no |
PF13808 |
P76119 |
7-94 |
nD1 |
6-95 |
90 |
e1jr5B1 |
1JR5 |
101.1.5 |
0.851 |
0.0 |
0.0 |
3.4|10.6|0 |
0.799 |
1.011 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Anti-sigma factor AsiA |
5 |
0 |
no |
no |
PF13810 |
F5YWH2 |
16-339 |
nD1 |
11-345 |
335 |
e4novA1 |
4NOV |
5.1.2 |
0.908 |
0.869 |
1.0 |
19.6|20.9|1 |
0.92 |
1.031 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
5-bladed |
2 |
21 |
no |
no |
PF13810 |
A0A840NDQ6 |
10-320 |
nD1 |
1-325 |
325 |
e4mlgH1 |
4MLG |
5.1.2 |
0.93 |
0.913 |
1.0 |
20.0|21.1|1 |
0.895 |
1.0 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
5-bladed |
4 |
22 |
no |
no |
PF13815 |
C3YJQ2 |
1-122 |
nD1 |
1-135 |
135 |
e7emfU1 |
7EMF |
4207.1.1 |
0.914 |
0.0 |
0.0 |
4.3|4.3|1 |
0.821 |
1.0 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
RNA polymerase II holoenzyme component SRB7 (MED21) |
3 |
1 |
no |
no |
PF13817 |
A0A3M3BDZ6 |
226-263 |
nD1 |
1-90,171-268 |
188 |
e3f9ks2 |
3F9K |
2484.1.1 |
0.944 |
0.0 |
0.0 |
9.4|10.2|1 |
0.825 |
0.959 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
8 |
5 |
no |
no |
PF13824 |
S3DCQ1 |
134-209 |
nD1 |
111-210 |
100 |
e4a24A1 |
4A24 |
377.9.1 |
0.851 |
0.0 |
0.0 |
2.2|2.2|1 |
0.972 |
2.105 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
HIT/MYND zinc finger-like |
HIT/MYND zinc finger-like |
3 |
2 |
no |
no |
PF13834 |
Q744F7 |
4-100 |
nD1 |
72-100 |
29 |
e2luyA2 |
2LUY |
377.1.1 |
0.923 |
0.784 |
0.872 |
0.0|0.0|0 |
0.718 |
0.58 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
no |
PF13834 |
Q8FPH7 |
11-106 |
nD1 |
77-105 |
29 |
e2luyA2 |
2LUY |
377.1.1 |
0.938 |
0.772 |
0.867 |
0.0|0.0|0 |
0.743 |
0.58 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
no |
PF13842 |
B6Q2R7 |
565-606 |
nD4 |
566-610 |
45 |
e1x4sA1 |
1X4S |
377.9.1 |
0.867 |
0.0 |
0.0 |
2.7|2.7|1 |
0.75 |
0.947 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
HIT/MYND zinc finger-like |
HIT/MYND zinc finger-like |
1 |
2 |
no |
no |
PF13842 |
A0A2J7Q6H1 |
463-493 |
nD2 |
441-503 |
63 |
e4b6dA1 |
4B6D |
376.1.2 |
0.912 |
0.0 |
0.532 |
2.1|2.3|1 |
0.802 |
1.016 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
Cysteine-rich domain |
1 |
2 |
no |
yes:out |
PF13863 |
A0A3Q2TS40 |
37-151 |
nD1 |
36-295 |
260 |
e6sc2A14 |
6SC2 |
148.1.3 |
0.853 |
0.883 |
0.0 |
5.7|5.7|1 |
0.372 |
2.796 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
3 |
0 |
no |
no |
PF13876 |
D5CUD8 |
20-121 |
nD1 |
16-124 |
109 |
e7nqhBL2 |
7NQH |
330.3.1 |
0.937 |
0.0 |
0.0 |
6.3|6.4|0 |
0.958 |
1.305 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Peptidyl-tRNA hydrolase domain-like |
Peptidyl-tRNA hydrolase domain-like |
3 |
3 |
no |
no |
PF13876 |
A0A806I1F4 |
5-80 |
nD1 |
1-84 |
84 |
e4wpyA1 |
4WPY |
330.8.1 |
0.914 |
0.455 |
0.658 |
5.9|6.1|1 |
0.821 |
0.977 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Rv2632c-like |
Rv2632c-like |
2 |
3 |
no |
no |
PF13876 |
A0A1W6WIP5 |
5-80 |
nD1 |
1-84 |
84 |
e4wpyA1 |
4WPY |
330.8.1 |
0.94 |
0.543 |
0.652 |
5.9|6.1|1 |
0.821 |
0.977 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
Rv2632c-like |
Rv2632c-like |
2 |
3 |
no |
no |
PF13885 |
H2YXB0 |
69-109 |
nD1 |
6-285 |
280 |
e3p4gB1 |
3P4G |
207.6.1 |
0.893 |
0.0 |
0.0 |
20.0|20.0|1 |
0.883 |
1.547 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
0 |
29 |
no |
no |
PF13886 |
M4B7A3 |
24-218 |
nD3 |
21-45,146-170,196-225 |
80 |
e6qv5A1 |
6QV5 |
601.33.1 |
0.927 |
0.0 |
0.0 |
4.9|4.9|1 |
0.767 |
0.588 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
3 |
0 |
no |
yes:3 |
PF13888 |
G5EFI7 |
789-926 |
nD4 |
781-925 |
145 |
e4yztA2 |
4YZT |
11.1.1 |
0.932 |
0.0 |
0.0 |
4.5|5.2|0 |
0.901 |
1.343 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
7 |
no |
yes:out |
PF13888 |
H3AP78 |
582-717 |
nD4 |
576-718 |
143 |
e2qsvA4 |
2QSV |
11.1.1 |
0.874 |
0.0 |
0.0 |
4.8|6.1|0 |
0.907 |
1.324 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
6 |
no |
yes:out |
PF13888 |
A0A6J0YA56 |
1-136 |
nD1 |
6-135 |
130 |
e4avkA1 |
4AVK |
11.1.5 |
0.948 |
0.0 |
0.0 |
5.9|6.5|0 |
0.742 |
0.844 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
0 |
5 |
no |
no |
PF13890 |
W5M0S6 |
620-773 |
nD3 |
621-645,671-710,741-760 |
85 |
e5j9tA3 |
5J9T |
101.1.15 |
0.858 |
0.0 |
0.0 |
2.7|2.7|1 |
0.65 |
0.977 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
HAT1, C-terminal domain |
3 |
3 |
no |
no |
PF13898 |
W5M1G5 |
110-468 |
nD2 |
101-425,451-465 |
340 |
e6k6lA1 |
6K6L |
219.1.1 |
0.918 |
0.439 |
0.484 |
3.7|3.9|1 |
0.475 |
1.518 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
10 |
12 |
no |
no |
PF13898 |
A0A7J8D6Y7 |
20-356 |
nD1 |
11-355 |
345 |
e6txbA1 |
6TXB |
219.1.1 |
0.936 |
0.812 |
0.837 |
4.1|4.1|1 |
0.475 |
1.54 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
10 |
11 |
no |
no |
PF13924 |
Q10Y07 |
12-153 |
nD1 |
6-60,86-160 |
130 |
e3rbyB1 |
3RBY |
9.14.1 |
0.909 |
0.0 |
0.0 |
9.5|9.5|1 |
0.758 |
1.066 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Uncharacterized protein YLR301W |
Uncharacterized protein YLR301W |
2 |
8 |
no |
no |
PF13924 |
A0A0H2W2I2 |
27-160 |
nD1 |
21-160 |
140 |
e3rbyB1 |
3RBY |
9.14.1 |
0.857 |
0.0 |
0.0 |
9.7|9.7|0 |
0.767 |
1.148 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Uncharacterized protein YLR301W |
Uncharacterized protein YLR301W |
1 |
10 |
no |
no |
PF13937 |
A0A6I3KPF9 |
7-83 |
nD1 |
1-80 |
80 |
e6j9fC9 |
6J9F |
3681.1.1 |
0.873 |
0.0 |
0.0 |
8.3|8.3|1 |
0.908 |
0.812 |
pymol |
more |
good_domain |
a+b complex topology |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
2 |
1 |
no |
yes:2 |
PF13937 |
A0A098TCC3 |
7-81 |
nD1 |
11-75 |
65 |
e6j9fC9 |
6J9F |
3681.1.1 |
0.866 |
0.0 |
0.0 |
7.9|7.9|1 |
0.739 |
0.66 |
pymol |
more |
good_domain |
a+b complex topology |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit |
2 |
1 |
no |
yes:2 |
PF13937 |
A0A520MMC7 |
10-84 |
nD1 |
1-85 |
85 |
e4i0xF1 |
4I0X |
150.5.1 |
0.925 |
0.0 |
0.0 |
6.9|8.2|0 |
0.951 |
0.914 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
ESAT-6 like |
ESAT-6 like |
2 |
1 |
no |
yes:2 |
PF13941 |
A4J7Z4 |
5-459 |
nD1 |
76-210 |
135 |
e3eqzB1 |
3EQZ |
2007.1.3 |
0.945 |
0.0 |
0.572 |
10.8|12.1|0 |
0.962 |
1.059 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
5 |
5 |
no |
no |
PF13945 |
Q55FI2 |
203-380 |
nD1 |
296-390,1096-1135 |
135 |
e5cw4C1 |
5CW4 |
1008.1.1 |
0.879 |
0.0 |
0.0 |
5.4|5.5|0 |
0.873 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
BRCC36 C-terminal helical domain |
BRCC36 C-terminal helical domain |
BRCC36 C-terminal helical domain |
4 |
0 |
no |
no |
PF13945 |
Q5B3C8 |
91-272 |
nD1 |
181-260,431-475 |
125 |
e1jq0A1 |
1JQ0 |
3567.1.1 |
0.9 |
0.0 |
0.0 |
5.8|5.8|1 |
0.924 |
2.119 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
4 |
0 |
no |
no |
PF13948 |
A0DTC9 |
196-250 |
nD1 |
41-170,176-250,256-285 |
235 |
e2ahxA1 |
2AHX |
389.6.1 |
0.947 |
0.975 |
0.46 |
0.0|2.9|1 |
0.873 |
1.767 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
Growth factor receptor domain |
Growth factor receptor domain |
0 |
17 |
no |
no |
PF13957 |
Q47157 |
26-130 |
nD1 |
1-130 |
130 |
e5ja8C1 |
5JA8 |
4312.1.1 |
0.94 |
0.0 |
0.0 |
7.5|7.5|1 |
0.91 |
1.436 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
5 |
no |
no |
PF13961 |
A0A438HYT7 |
13-38 |
nD1 |
11-100 |
90 |
e6gzaB1 |
6GZA |
170.1.1 |
0.899 |
0.0 |
0.0 |
5.4|5.4|1 |
0.766 |
1.034 |
pymol |
more |
good_domain |
alpha bundles |
Retrovirus capsid protein |
Retrovirus capsid protein-C |
Retrovirus capsid protein-C |
3 |
1 |
no |
no |
PF13961 |
A0A5D2FKQ3 |
12-38 |
nD1 |
6-104 |
99 |
e6gzaB1 |
6GZA |
170.1.1 |
0.891 |
0.0 |
0.0 |
5.5|5.5|1 |
0.834 |
1.138 |
pymol |
more |
good_domain |
alpha bundles |
Retrovirus capsid protein |
Retrovirus capsid protein-C |
Retrovirus capsid protein-C |
5 |
0 |
no |
no |
PF13961 |
A0A4Y2EKS8 |
11-36 |
nD1 |
6-99 |
94 |
e4ph0A1 |
4PH0 |
170.1.1 |
0.898 |
0.0 |
0.0 |
4.5|4.5|1 |
0.847 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
Retrovirus capsid protein |
Retrovirus capsid protein-C |
Retrovirus capsid protein-C |
3 |
1 |
no |
no |
PF13962 |
A0A2P5DBJ2 |
166-279 |
nD2 |
161-320 |
160 |
e4hksA1 |
4HKS |
3562.1.1 |
0.859 |
0.0 |
0.0 |
13.4|13.4|1 |
0.846 |
0.851 |
pymol |
more |
good_domain |
alpha bundles |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
4 |
1 |
no |
yes:4 |
PF13962 |
A0A2P5DD45 |
166-279 |
nD2 |
161-320 |
160 |
e4hksA1 |
4HKS |
3562.1.1 |
0.859 |
0.0 |
0.0 |
13.4|13.4|1 |
0.846 |
0.851 |
pymol |
more |
good_domain |
alpha bundles |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
4 |
1 |
no |
yes:4 |
PF13968 |
Q5VQJ1 |
51-406 |
nD1 |
6-175,181-210,281-365 |
285 |
e1dlcA3 |
1DLC |
5000.4.1 |
0.877 |
0.0 |
0.0 |
7.0|7.3|0 |
0.632 |
1.25 |
pymol |
more |
good_domain |
alpha arrays |
Toxins' membrane translocation domains |
delta-Endotoxin (insectocide), N-terminal domain |
delta-Endotoxin (insectocide), N-terminal domain |
10 |
1 |
no |
yes:7 |
PF13976 |
A7TE15 |
423-500 |
nD4 |
456-500 |
45 |
e7ouhB3 |
7OUH |
101.1.1 |
0.9 |
0.975 |
0.0 |
0.0|2.8|0 |
0.89 |
0.616 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF13976 |
Q2R072 |
453-520 |
nD3 |
476-520 |
45 |
e7ouhB3 |
7OUH |
101.1.1 |
0.925 |
0.984 |
0.0 |
0.0|0.0|1 |
0.955 |
0.616 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF13976 |
Q6AUC7 |
316-385 |
nD3 |
341-385 |
45 |
e5m0rI2 |
5M0R |
101.1.1 |
0.926 |
0.985 |
0.0 |
0.0|2.8|1 |
0.855 |
0.616 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF13983 |
I2B403 |
29-103 |
nD1 |
41-103 |
63 |
e5boiA2 |
5BOI |
243.3.1 |
0.909 |
0.0 |
0.0 |
7.0|7.6|1 |
0.882 |
0.63 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF13983 |
A8ARE7 |
26-100 |
nD1 |
36-100 |
65 |
e3u1wC3 |
3U1W |
809.2.1 |
0.927 |
0.0 |
0.631 |
5.2|6.4|0 |
0.981 |
1.057 |
pymol |
na |
good_domain |
a+b two layers |
BLIP-like |
BT0923-like |
BT0923-like |
2 |
4 |
yes:out |
no |
PF13983 |
A6TFH6 |
30-104 |
nD1 |
36-104 |
69 |
e5boiA2 |
5BOI |
243.3.1 |
0.929 |
0.0 |
0.0 |
6.8|7.5|1 |
0.909 |
0.69 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF13991 |
Q2KZ70 |
23-94 |
nD1 |
21-85 |
65 |
e5a4oB1 |
5A4O |
295.1.1 |
0.922 |
0.865 |
0.716 |
3.5|5.4|0 |
0.832 |
0.533 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
2 |
2 |
no |
no |
PF13993 |
K8D157 |
2-65 |
nD1 |
1-65 |
65 |
e2l3nA1 |
2L3N |
103.1.1 |
0.87 |
0.0 |
0.311 |
2.5|3.2|1 |
0.814 |
1.14 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
5 |
2 |
no |
no |
PF13993 |
V5U195 |
2-65 |
nD1 |
1-65 |
65 |
e2l3nA1 |
2L3N |
103.1.1 |
0.87 |
0.0 |
0.311 |
2.5|3.2|1 |
0.814 |
1.14 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
5 |
2 |
no |
no |
PF13994 |
A0A077KUK5 |
6-134 |
nD3 |
96-135 |
40 |
e6amaY1 |
6AMA |
101.1.9 |
0.915 |
0.805 |
0.892 |
0.0|4.0|0 |
0.81 |
0.457 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
2 |
2 |
no |
yes:out |
PF13994 |
A0A6I2JD11 |
6-134 |
nD3 |
96-135 |
40 |
e6amaY1 |
6AMA |
101.1.9 |
0.911 |
0.768 |
0.879 |
0.0|3.2|0 |
0.81 |
0.457 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
2 |
2 |
no |
yes:out |
PF13996 |
A0A7U7FEI8 |
1-63 |
nD1 |
6-65 |
60 |
e1z47A3 |
1Z47 |
2.4.1 |
0.869 |
0.0 |
0.0 |
4.4|4.6|1 |
0.784 |
0.896 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
MOP-like |
MOP-like |
1 |
4 |
yes:in |
no |
PF14003 |
K1RNK5 |
13-72 |
nD1 |
6-50 |
45 |
e2n8oA1 |
2N8O |
198.4.1 |
0.864 |
0.0 |
0.0 |
3.8|3.8|1 |
0.794 |
0.882 |
pymol |
more |
good_domain |
alpha arrays |
Saposin-like |
Enterocin 7A and 7B |
Enterocin 7A and 7B |
3 |
0 |
no |
no |
PF14007 |
C0Z7W0 |
8-94 |
nD1 |
1-103 |
103 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.906 |
0.0 |
0.0 |
9.1|9.1|1 |
0.968 |
1.03 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF14007 |
A0A3M8C350 |
8-93 |
nD1 |
1-103 |
103 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.906 |
0.0 |
0.0 |
9.1|9.3|1 |
0.968 |
1.03 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF14007 |
A0A0Q3WKF7 |
9-94 |
nD1 |
1-100 |
100 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.938 |
0.0 |
0.0 |
8.7|9.0|1 |
0.948 |
1.0 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF14014 |
R5A5A6 |
36-179 |
nD2 |
31-50,81-105,156-195 |
85 |
e6qfjA1 |
6QFJ |
327.7.1 |
0.884 |
0.0 |
0.338 |
5.8|5.8|1 |
0.866 |
1.012 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
3 |
5 |
yes:out |
no |
PF14015 |
A0A5S9RKJ3 |
13-106 |
nD1 |
1-115 |
115 |
e5nenB1 |
5NEN |
5086.1.1 |
0.926 |
0.0 |
0.0 |
9.2|9.2|1 |
0.666 |
1.361 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
0 |
no |
yes:2 |
PF14033 |
U7Q1T8 |
111-554 |
nD2 |
21-30,61-80,111-208,246-295,381-455,486-610 |
378 |
e6n1fA1 |
6N1F |
10.12.1 |
0.947 |
0.79 |
0.832 |
11.1|11.3|1 |
0.958 |
2.148 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Double-stranded beta-helix |
Double-stranded beta-helix |
8 |
17 |
no |
no |
PF14036 |
A0A5C8P1Z2 |
20-91 |
nD1 |
6-100 |
95 |
e4d7xA1 |
4D7X |
103.4.1 |
0.92 |
0.0 |
0.0 |
6.1|6.1|1 |
0.811 |
0.979 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
yes:3 |
PF14036 |
A0A0L0QNB6 |
20-92 |
nD1 |
6-99 |
94 |
e4d7xA1 |
4D7X |
103.4.1 |
0.916 |
0.0 |
0.0 |
6.0|6.0|1 |
0.789 |
0.969 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
yes:3 |
PF14045 |
K0B188 |
7-297 |
nD1 |
1-160 |
160 |
e5xanB4 |
5XAN |
5067.1.1 |
0.926 |
0.375 |
0.365 |
5.7|7.0|1 |
0.543 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
Multidrug efflux transporter AcrB transmembrane domain |
5 |
0 |
no |
yes:4 |
PF14047 |
A0A1B8Y3H6 |
84-146 |
nD2 |
81-155 |
75 |
e7po9A1 |
7PO9 |
377.1.1 |
0.858 |
0.0 |
0.0 |
4.0|4.3|1 |
0.685 |
1.5 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
5 |
no |
no |
PF14053 |
A0A412S2A9 |
1-64 |
nD1 |
1-64 |
64 |
e3ez2B2 |
3EZ2 |
101.1.9 |
0.897 |
0.654 |
0.988 |
2.5|3.2|1 |
0.758 |
0.731 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
4 |
1 |
no |
no |
PF14057 |
B8I5P3 |
4-329 |
nD1 |
6-260,281-330 |
305 |
e2iyaA2 |
2IYA |
7512.1.1 |
0.945 |
0.0 |
0.0 |
7.5|7.5|1 |
0.747 |
1.525 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
14 |
7 |
no |
no |
PF14058 |
R5B3B4 |
7-146 |
nD1 |
11-75 |
65 |
e6h49A1 |
6H49 |
7108.1.1 |
0.86 |
0.0 |
0.0 |
5.5|5.5|1 |
0.831 |
1.0 |
pymol |
more |
good_domain |
alpha complex topology |
Stl repressor, middle domain |
Stl repressor, middle domain |
Stl repressor, middle domain |
3 |
0 |
no |
no |
PF14060 |
R5NZV1 |
30-167 |
nD1 |
21-50,81-170 |
120 |
e6e8aA1 |
6E8A |
881.1.1 |
0.867 |
0.0 |
0.0 |
7.2|7.2|1 |
0.794 |
0.729 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
4 |
6 |
yes:out |
no |
PF14063 |
C7M5J2 |
38-181 |
nD1 |
1-195 |
195 |
e1zkeD1 |
1ZKE |
605.6.1 |
0.888 |
0.319 |
0.317 |
5.2|6.0|0 |
0.851 |
2.216 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
HP1531-like |
HP1531-like |
5 |
0 |
no |
no |
PF14067 |
Q83C62 |
499-672 |
nD4 |
486-540,571-680 |
165 |
e2qrdC1 |
2QRD |
331.4.1 |
0.943 |
0.0 |
0.0 |
5.6|5.6|1 |
0.849 |
1.387 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
3 |
10 |
no |
yes:out |
PF14069 |
C6D4E2 |
20-93 |
nD1 |
11-100 |
90 |
e4udeA1 |
4UDE |
102.1.1 |
0.855 |
0.0 |
0.364 |
4.1|4.1|1 |
0.683 |
1.154 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
SAM domain-like |
5 |
0 |
no |
no |
PF14069 |
A0A6L8UX78 |
14-87 |
nD1 |
6-90 |
85 |
e4udeA1 |
4UDE |
102.1.1 |
0.862 |
0.0 |
0.333 |
4.3|4.3|1 |
0.675 |
1.09 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
SAM domain-like |
5 |
0 |
no |
no |
PF14078 |
A0A4R5GFS2 |
3-123 |
nD1 |
1-133 |
133 |
e1oxjA2 |
1OXJ |
109.4.1 |
0.863 |
0.0 |
0.0 |
5.2|6.8|0 |
0.882 |
0.465 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
3 |
no |
no |
PF14082 |
A0A3Q8G8P3 |
21-184 |
nD1 |
6-205 |
200 |
e6wxxC2 |
6WXX |
2008.1.1 |
0.939 |
0.0 |
0.978 |
8.0|8.0|1 |
0.916 |
0.98 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
7 |
no |
no |
PF14083 |
E3I8P9 |
57-158 |
nD1 |
31-95 |
65 |
e6e3cC1 |
6E3C |
2.27.1 |
0.915 |
0.462 |
0.676 |
3.0|3.0|1 |
0.558 |
0.844 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
phage L capsid decoration protein |
phage L capsid decoration protein |
1 |
5 |
no |
no |
PF14083 |
E3I8P9 |
57-158 |
nD2 |
16-30,96-160 |
80 |
e1tg0A1 |
1TG0 |
4.1.1 |
0.855 |
0.0 |
0.0 |
2.1|2.3|0 |
0.821 |
1.0 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
6 |
no |
no |
PF14088 |
A0A1N7L9F4 |
10-135 |
nD1 |
6-140 |
135 |
e5fr7B1 |
5FR7 |
241.1.1 |
0.868 |
0.0 |
0.0 |
6.6|6.6|1 |
0.864 |
1.015 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
4 |
4 |
no |
no |
PF14088 |
A0A202BW52 |
10-135 |
nD1 |
6-140 |
135 |
e5fr7B1 |
5FR7 |
241.1.1 |
0.85 |
0.0 |
0.0 |
6.5|6.5|1 |
0.863 |
1.015 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
3 |
4 |
no |
no |
PF14092 |
F9YT35 |
28-532 |
nD1 |
56-95,111-295,311-325 |
240 |
e1lnsA1 |
1LNS |
10.1.2 |
0.872 |
0.0 |
0.0 |
5.3|5.3|1 |
0.795 |
1.529 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
4 |
16 |
yes:out |
no |
PF14092 |
F9YT35 |
28-532 |
nD3 |
41-55,326-534 |
224 |
e1lnsA1 |
1LNS |
10.1.2 |
0.866 |
0.0 |
0.0 |
5.2|8.5|0 |
0.844 |
1.427 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
3 |
13 |
yes:out |
no |
PF14092 |
C7M6S5 |
28-506 |
nD2 |
36-55,331-465,486-508 |
178 |
e4aw7A3 |
4AW7 |
10.1.2 |
0.908 |
0.0 |
0.0 |
6.3|7.6|0 |
0.914 |
1.134 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
9 |
yes:out |
no |
PF14097 |
A0A1I1EUQ1 |
4-183 |
nD1 |
1-180 |
180 |
e7jt8I1 |
7JT8 |
2004.1.1 |
0.939 |
0.0 |
0.719 |
6.5|7.0|1 |
0.776 |
0.807 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
4 |
8 |
no |
no |
PF14097 |
A0A7Z1KET6 |
4-183 |
nD1 |
1-185 |
185 |
e4cvkA2 |
4CVK |
2004.1.1 |
0.94 |
0.0 |
0.718 |
6.8|6.8|1 |
0.802 |
0.83 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
4 |
8 |
no |
no |
PF14097 |
A0A521B256 |
2-178 |
nD1 |
1-180 |
180 |
e4cvkA2 |
4CVK |
2004.1.1 |
0.926 |
0.0 |
0.7 |
6.3|6.4|1 |
0.766 |
0.807 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
4 |
5 |
no |
no |
PF14100 |
A0A2T0K0W9 |
11-287 |
nD1 |
1-295 |
295 |
e5xq3B2 |
5XQ3 |
12.3.1 |
0.902 |
0.0 |
0.896 |
17.2|17.2|1 |
0.88 |
1.05 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
2 |
21 |
no |
no |
PF14100 |
A0A5C4WQT5 |
13-289 |
nD1 |
1-300 |
300 |
e5xq3B2 |
5XQ3 |
12.3.1 |
0.907 |
0.0 |
0.917 |
17.8|17.8|1 |
0.895 |
1.068 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
2 |
21 |
no |
no |
PF14100 |
A0A1I2GFN3 |
13-289 |
nD1 |
1-295 |
295 |
e5xq3B2 |
5XQ3 |
12.3.1 |
0.908 |
0.0 |
0.879 |
17.2|17.2|1 |
0.886 |
1.05 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
2 |
19 |
no |
no |
PF14103 |
A0A3A8GDF9 |
9-200 |
nD1 |
1-204 |
204 |
e6njwA1 |
6NJW |
2006.1.3 |
0.938 |
0.934 |
0.974 |
5.2|5.4|0 |
0.724 |
1.5 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
Toprim domain |
8 |
4 |
no |
no |
PF14107 |
C0ZGS0 |
20-138 |
nD1 |
22-54,77-135 |
92 |
e4ku0D1 |
4KU0 |
3174.3.1 |
0.927 |
0.0 |
0.0 |
7.3|7.5|1 |
0.71 |
0.989 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L14-like |
PAAR-repeat protein |
PAAR-repeat protein |
1 |
6 |
no |
no |
PF14107 |
C0ZHS7 |
5-122 |
nD1 |
1-128 |
128 |
e4jivD1 |
4JIV |
3174.3.1 |
0.898 |
0.0 |
0.0 |
9.1|10.3|1 |
0.966 |
1.376 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L14-like |
PAAR-repeat protein |
PAAR-repeat protein |
1 |
7 |
yes:in |
no |
PF14107 |
A0A1Z4QYJ2 |
5-125 |
nD1 |
1-130 |
130 |
e4jiwP1 |
4JIW |
3174.3.1 |
0.892 |
0.0 |
0.0 |
9.6|10.4|1 |
0.978 |
1.398 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L14-like |
PAAR-repeat protein |
PAAR-repeat protein |
1 |
6 |
no |
no |
PF14109 |
A0A512RH68 |
4-133 |
nD1 |
1-135 |
135 |
e4d8mA1 |
4D8M |
10.1.2 |
0.928 |
0.0 |
0.967 |
8.5|8.5|1 |
0.843 |
0.86 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
8 |
no |
no |
PF14111 |
A0A6J0JJR8 |
39-159 |
nD2 |
106-205 |
100 |
e6sxwA1 |
6SXW |
304.9.1 |
0.892 |
0.0 |
0.0 |
5.2|5.4|1 |
0.915 |
1.053 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
1 |
5 |
no |
no |
PF14111 |
A0A6J0L0N1 |
39-159 |
nD2 |
106-210 |
105 |
e2dnqA1 |
2DNQ |
304.9.1 |
0.913 |
0.0 |
0.0 |
6.0|6.5|1 |
0.908 |
1.105 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
2 |
5 |
no |
no |
PF14111 |
F6I3D2 |
45-168 |
nD2 |
116-195 |
80 |
e2dnqA1 |
2DNQ |
304.9.1 |
0.927 |
0.0 |
0.0 |
5.8|5.8|1 |
0.868 |
0.842 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
2 |
5 |
no |
no |
PF14112 |
A0A316EJ55 |
7-114 |
nD1 |
1-115 |
115 |
e4dzdA3 |
4DZD |
304.51.1 |
0.854 |
0.0 |
0.0 |
3.5|3.6|0 |
0.899 |
0.935 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
4 |
4 |
no |
no |
PF14112 |
A0A6I1H1N5 |
11-119 |
nD1 |
1-120 |
120 |
e4dzdA3 |
4DZD |
304.51.1 |
0.865 |
0.0 |
0.0 |
3.5|3.9|0 |
0.912 |
0.976 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related |
4 |
5 |
no |
no |
PF14117 |
A0A249KG29 |
9-62 |
nD1 |
6-65 |
60 |
e4eqqA2 |
4EQQ |
101.35.1 |
0.909 |
0.0 |
0.0 |
4.4|4.4|1 |
0.885 |
1.25 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
4 |
1 |
no |
no |
PF14118 |
A0A6M3Z8J9 |
4-86 |
nD1 |
6-85 |
80 |
e1jq0A1 |
1JQ0 |
3567.1.1 |
0.856 |
0.0 |
0.0 |
4.7|4.7|1 |
0.768 |
1.356 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
4 |
0 |
no |
yes:2 |
PF14120 |
Q8CUH0 |
1-61 |
nD1 |
1-60 |
60 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.863 |
0.0 |
0.0 |
7.0|7.0|1 |
0.947 |
0.992 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
1 |
4 |
no |
no |
PF14120 |
A0A840PZI4 |
1-60 |
nD1 |
1-60 |
60 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.865 |
0.0 |
0.0 |
6.5|6.5|1 |
0.947 |
0.992 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
1 |
4 |
no |
no |
PF14120 |
A0A0A3J6P8 |
1-60 |
nD1 |
1-60 |
60 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.866 |
0.0 |
0.0 |
6.3|6.3|1 |
0.947 |
0.992 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
1 |
4 |
no |
no |
PF14123 |
C6W100 |
23-186 |
nD2 |
121-195 |
75 |
e7ogkA6 |
7OGK |
101.11.1 |
0.893 |
0.0 |
0.0 |
4.7|4.7|1 |
0.725 |
0.843 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
4 |
0 |
no |
no |
PF14126 |
A0A3N4H6S6 |
2-158 |
nD1 |
6-159 |
154 |
e7oceJ1 |
7OCE |
633.23.1 |
0.932 |
0.206 |
0.314 |
14.3|14.3|1 |
0.835 |
0.824 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Claudin |
Claudin |
4 |
5 |
yes:in |
yes:3 |
PF14126 |
A0A3M1IGU1 |
2-142 |
nD1 |
6-143 |
138 |
e7oceJ1 |
7OCE |
633.23.1 |
0.944 |
0.225 |
0.296 |
13.9|13.9|1 |
0.747 |
0.738 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Claudin |
Claudin |
4 |
2 |
yes:in |
yes:3 |
PF14129 |
A0A5C8K460 |
1-76 |
nD1 |
1-90 |
90 |
e6noyA1 |
6NOY |
101.1.11 |
0.889 |
0.959 |
0.965 |
4.4|6.2|0 |
0.795 |
1.463 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
no |
PF14129 |
A0A7C7IU67 |
25-107 |
nD1 |
26-110 |
85 |
e2ga1A1 |
2GA1 |
101.1.1 |
0.871 |
0.877 |
0.797 |
3.3|3.9|0 |
0.842 |
1.164 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
yes:out |
no |
PF14132 |
A0A0E2V489 |
2-303 |
nD1 |
1-140,156-190 |
175 |
e1f46A1 |
1F46 |
331.7.1 |
0.933 |
0.881 |
0.797 |
7.3|7.3|1 |
0.763 |
1.259 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Cell-division protein ZipA, C-terminal domain |
Cell-division protein ZipA, C-terminal domain |
5 |
8 |
no |
no |
PF14132 |
A0A654RVV4 |
2-303 |
nD1 |
1-140,156-190 |
175 |
e1f46A1 |
1F46 |
331.7.1 |
0.931 |
0.876 |
0.806 |
7.2|7.2|1 |
0.755 |
1.259 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Cell-division protein ZipA, C-terminal domain |
Cell-division protein ZipA, C-terminal domain |
5 |
8 |
no |
no |
PF14132 |
A0A064AE15 |
2-303 |
nD1 |
1-190 |
190 |
e1f46A1 |
1F46 |
331.7.1 |
0.928 |
0.876 |
0.806 |
7.3|7.3|1 |
0.77 |
1.367 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Cell-division protein ZipA, C-terminal domain |
Cell-division protein ZipA, C-terminal domain |
5 |
9 |
no |
no |
PF14133 |
A0A448N573 |
1-251 |
nD1 |
1-40,63-255 |
233 |
e2im9A1 |
2IM9 |
219.1.1 |
0.936 |
0.433 |
0.409 |
3.3|4.0|1 |
0.384 |
1.04 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
8 |
8 |
no |
no |
PF14133 |
U2GIA3 |
3-253 |
nD1 |
1-40,66-255 |
230 |
e2im9A1 |
2IM9 |
219.1.1 |
0.929 |
0.375 |
0.364 |
3.5|4.2|1 |
0.384 |
1.027 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
8 |
9 |
no |
no |
PF14133 |
U7KHU7 |
1-251 |
nD1 |
1-40,63-255 |
233 |
e2im9A1 |
2IM9 |
219.1.1 |
0.937 |
0.435 |
0.412 |
3.4|4.0|1 |
0.387 |
1.04 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
8 |
8 |
no |
no |
PF14135 |
A0A3N2KS37 |
27-247 |
nD1 |
41-170 |
130 |
e4qrlA1 |
4QRL |
9.23.1 |
0.899 |
0.357 |
0.0 |
8.1|8.1|1 |
0.871 |
1.182 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Hypothetical protein BT_0869 |
Hypothetical protein BT_0869 |
1 |
8 |
yes:out |
no |
PF14135 |
A0A3N2KS37 |
27-247 |
nD2 |
171-275 |
105 |
e4qrlA1 |
4QRL |
9.23.1 |
0.894 |
0.0 |
0.0 |
5.2|5.2|1 |
0.718 |
0.955 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Hypothetical protein BT_0869 |
Hypothetical protein BT_0869 |
2 |
7 |
yes:out |
no |
PF14135 |
A0A3N2LP19 |
27-247 |
nD1 |
41-170 |
130 |
e4qrlA1 |
4QRL |
9.23.1 |
0.897 |
0.357 |
0.0 |
8.0|8.0|1 |
0.861 |
1.182 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Hypothetical protein BT_0869 |
Hypothetical protein BT_0869 |
1 |
8 |
yes:out |
no |
PF14135 |
A0A3N2LP19 |
27-247 |
nD2 |
171-275 |
105 |
e4qrlA1 |
4QRL |
9.23.1 |
0.899 |
0.0 |
0.0 |
5.2|5.2|1 |
0.742 |
0.955 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Hypothetical protein BT_0869 |
Hypothetical protein BT_0869 |
2 |
7 |
yes:out |
no |
PF14135 |
A0A512RE94 |
22-254 |
nD1 |
27-175 |
149 |
e4nw4A2 |
4NW4 |
9.1.1 |
0.947 |
0.0 |
0.312 |
8.5|8.5|1 |
0.883 |
0.974 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
2 |
8 |
yes:out |
no |
PF14135 |
A0A512RE94 |
22-254 |
nD2 |
176-290 |
115 |
e7b28F1 |
7B28 |
9.1.1 |
0.911 |
0.0 |
0.0 |
7.0|7.0|1 |
0.698 |
0.752 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
1 |
8 |
yes:out |
no |
PF14145 |
L0GZK4 |
96-151 |
nD1 |
26-235 |
210 |
e3ux4A1 |
3UX4 |
3543.1.1 |
0.94 |
0.0 |
0.0 |
10.6|10.6|1 |
0.938 |
1.097 |
pymol |
more |
good_domain |
alpha complex topology |
Acid-activated urea channel |
Acid-activated urea channel |
Acid-activated urea channel |
6 |
0 |
no |
yes:6 |
PF14159 |
A0A7X5I4D2 |
4-87 |
nD1 |
1-85 |
85 |
e2mi2A1 |
2MI2 |
3473.1.1 |
0.925 |
0.0 |
0.0 |
4.6|4.6|1 |
0.81 |
1.619 |
pymol |
more |
good_domain |
extended segments |
Twin-arginine transport (Tat) system component TatA |
Twin-arginine transport (Tat) system component TatA |
Twin-arginine transport (Tat) system component TatA |
4 |
0 |
no |
yes:2 |
PF14164 |
A0A1L3MQ96 |
1-62 |
nD1 |
6-60 |
55 |
e3x38A1 |
3X38 |
142.3.1 |
0.923 |
0.64 |
0.373 |
7.1|7.1|1 |
0.679 |
0.705 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
3 |
0 |
no |
no |
PF14164 |
A0A4U1MGH7 |
6-62 |
nD1 |
6-60 |
55 |
e3x38A1 |
3X38 |
142.3.1 |
0.925 |
0.621 |
0.355 |
7.1|7.1|1 |
0.667 |
0.705 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
3 |
0 |
no |
no |
PF14164 |
A0A5C6W5X1 |
1-62 |
nD1 |
6-60 |
55 |
e3x38A1 |
3X38 |
142.3.1 |
0.928 |
0.681 |
0.436 |
6.7|6.7|1 |
0.679 |
0.705 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
Mitochondrial morphogenesis protein Sld7 C-terminal domain |
3 |
0 |
no |
no |
PF14167 |
O34579 |
33-264 |
nD1 |
61-260 |
200 |
e1w3fA2 |
1W3F |
825.1.1 |
0.945 |
0.0 |
0.0 |
3.9|6.0|1 |
0.779 |
0.957 |
pymol |
more |
good_domain |
beta complex topology |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
3 |
8 |
yes:out |
no |
PF14177 |
K6DK76 |
4-119 |
nD1 |
1-120 |
120 |
e1vjlA2 |
1VJL |
802.1.1 |
0.888 |
0.0 |
0.0 |
2.9|3.3|0 |
0.689 |
1.6 |
pymol |
more |
good_domain |
a+b two layers |
Hypothetical protein TM0160 |
Hypothetical protein TM0160 |
Hypothetical protein TM0160 |
4 |
4 |
no |
no |
PF14191 |
C7H1D6 |
1038-1137 |
nD10 |
1036-1140 |
105 |
e2qsdC4 |
2QSD |
3115.4.1 |
0.883 |
0.0 |
0.0 |
2.4|2.6|0 |
0.629 |
1.214 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
Uncharacterized conserved protein Il1583 |
Uncharacterized conserved protein Il1583 |
4 |
5 |
no |
no |
PF14198 |
B0PDD3 |
15-123 |
nD1 |
36-125 |
90 |
e3vh5W1 |
3VH5 |
148.1.1 |
0.855 |
0.0 |
0.0 |
5.1|5.5|0 |
0.876 |
0.968 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
3 |
0 |
no |
no |
PF14199 |
R6P1Z8 |
1-370 |
nD2 |
231-320 |
90 |
e6eqoA2 |
6EQO |
4953.2.1 |
0.884 |
0.0 |
0.0 |
3.9|3.9|1 |
0.776 |
1.011 |
pymol |
more |
good_domain |
alpha arrays |
Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain |
Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain |
Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain |
4 |
1 |
no |
no |
PF14207 |
A0A1S9ZRP9 |
4-48 |
nD1 |
1-50 |
50 |
e2wnmA1 |
2WNM |
3115.2.1 |
0.859 |
0.976 |
0.978 |
0.0|0.0|1 |
0.695 |
0.847 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
GP2 |
GP2 |
2 |
2 |
no |
no |
PF14207 |
A0A6M1WTN0 |
4-49 |
nD1 |
1-50 |
50 |
e2wnmA1 |
2WNM |
3115.2.1 |
0.857 |
0.977 |
0.978 |
0.0|0.0|0 |
0.678 |
0.847 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
GP2 |
GP2 |
2 |
2 |
no |
no |
PF14210 |
Q96Z90 |
2-67 |
nD1 |
16-70 |
55 |
e4ivnA2 |
4IVN |
101.1.1 |
0.918 |
0.234 |
0.0 |
3.5|19.4|0 |
0.802 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
1 |
no |
yes:out |
PF14210 |
Q97YN1 |
2-67 |
nD1 |
16-80 |
65 |
e7nfuA2 |
7NFU |
101.1.1 |
0.86 |
0.0 |
0.821 |
3.2|3.8|0 |
0.945 |
0.89 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
no |
no |
PF14216 |
G0FMV7 |
9-96 |
nD1 |
1-100 |
100 |
e5o5oA1 |
5O5O |
7572.1.1 |
0.853 |
0.0 |
0.207 |
3.5|3.5|1 |
0.548 |
0.778 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Phosphofructokinase C-terminal domain |
Phosphofructokinase C-terminal domain |
Phosphofructokinase C-terminal domain |
2 |
3 |
no |
no |
PF14217 |
A0A3E0M040 |
8-73 |
nD1 |
6-70 |
65 |
e3keoA1 |
3KEO |
101.1.2 |
0.943 |
0.0 |
0.618 |
4.3|4.3|1 |
0.81 |
0.684 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF14217 |
A0A0A1VYS4 |
8-73 |
nD1 |
11-65 |
55 |
e3wg9D1 |
3WG9 |
101.1.2 |
0.94 |
0.0 |
0.618 |
2.9|4.1|1 |
0.752 |
0.579 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF14221 |
A0A1C5ZV34 |
1-163 |
nD1 |
16-50 |
35 |
e1rh5C1 |
1RH5 |
5028.1.1 |
0.9 |
0.471 |
0.262 |
0.0|3.1|0 |
0.677 |
1.029 |
pymol |
more |
good_domain |
extended segments |
Sec-beta subunit |
Sec-beta subunit |
Sec-beta subunit |
1 |
2 |
no |
yes:1 |
PF14224 |
Q3IBY4 |
25-525 |
nD1 |
31-110,151-225,276-360,427-460 |
274 |
e2ivfC1 |
2IVF |
11.1.1 |
0.946 |
0.0 |
0.218 |
6.0|6.0|1 |
0.902 |
2.537 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
13 |
yes:out |
no |
PF14224 |
A9G1N8 |
24-384 |
nD1 |
26-380 |
355 |
e1i8aA1 |
1I8A |
11.1.1 |
0.932 |
0.0 |
0.0 |
5.0|6.2|1 |
0.929 |
3.287 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
8 |
10 |
yes:out |
no |
PF14224 |
A0A127Q7Z1 |
1-442 |
nD1 |
1-170,208-295 |
258 |
e7jooC1 |
7JOO |
11.1.1 |
0.93 |
0.0 |
0.19 |
3.8|4.6|1 |
0.877 |
2.389 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
13 |
no |
no |
PF14230 |
W5W9M1 |
161-237 |
nD1 |
176-245 |
70 |
e4lziA2 |
4LZI |
243.3.1 |
0.901 |
0.0 |
0.0 |
2.8|2.8|0 |
0.751 |
0.7 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
no |
yes:out |
PF14238 |
D3R1U5 |
95-276 |
nD1 |
66-200 |
135 |
e4r7rA1 |
4R7R |
3784.1.1 |
0.897 |
0.0 |
0.0 |
6.5|6.5|1 |
0.822 |
1.098 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
3 |
8 |
no |
yes:out |
PF14238 |
D3R1U5 |
95-276 |
nD2 |
201-335 |
135 |
e2mctA1 |
2MCT |
3784.1.1 |
0.938 |
0.471 |
0.0 |
7.4|7.4|1 |
0.942 |
1.098 |
pymol |
more |
good_domain |
a+b two layers |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
Putative lipoprotein CPF_1278-related |
1 |
9 |
no |
yes:out |
PF14244 |
A0A0R0FA57 |
15-61 |
nD1 |
22-48,71-110 |
67 |
e6hwiB1 |
6HWI |
170.1.1 |
0.918 |
0.0 |
0.0 |
3.8|3.8|1 |
0.784 |
0.77 |
pymol |
more |
good_domain |
alpha bundles |
Retrovirus capsid protein |
Retrovirus capsid protein-C |
Retrovirus capsid protein-C |
3 |
1 |
no |
no |
PF14248 |
A0A1G6MBX8 |
4-124 |
nD1 |
6-124 |
119 |
e6wvgA2 |
6WVG |
174.1.1 |
0.944 |
0.24 |
0.0 |
8.1|8.1|1 |
0.786 |
0.815 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
yes:in |
yes:3 |
PF14249 |
Q114L4 |
20-349 |
nD1 |
6-210 |
205 |
e7dmoB1 |
7DMO |
4252.1.1 |
0.933 |
0.989 |
0.99 |
13.1|13.8|1 |
0.831 |
1.158 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
3 |
10 |
no |
no |
PF14249 |
K9VYM2 |
23-352 |
nD1 |
16-210 |
195 |
e7dmoB1 |
7DMO |
4252.1.1 |
0.948 |
0.989 |
0.99 |
10.7|11.0|1 |
0.813 |
1.102 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
3 |
10 |
no |
no |
PF14249 |
W1NS09 |
83-439 |
nD1 |
61-290 |
230 |
e6kawA1 |
6KAW |
4252.1.1 |
0.923 |
0.983 |
0.99 |
11.8|11.8|1 |
0.841 |
1.299 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
4 |
9 |
yes:out |
no |
PF14257 |
I0JKF2 |
71-286 |
nD2 |
151-220 |
70 |
e5xnsA1 |
5XNS |
3922.1.1 |
0.898 |
0.0 |
0.522 |
10.2|10.2|1 |
0.713 |
0.543 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
2 |
2 |
yes:out |
yes:out |
PF14257 |
G8S4F2 |
90-300 |
nD2 |
171-235 |
65 |
e2ic6B1 |
2IC6 |
192.8.1 |
0.902 |
0.356 |
0.337 |
6.0|6.0|1 |
0.861 |
0.884 |
pymol |
na |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
2 |
2 |
yes:out |
yes:out |
PF14267 |
Q5LPW2 |
244-295 |
nD2 |
201-300 |
100 |
e1h5pA1 |
1H5P |
4.2.1 |
0.878 |
0.0 |
0.0 |
3.7|3.7|1 |
0.669 |
1.064 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SAND |
SAND |
2 |
8 |
no |
no |
PF14267 |
F4AYN1 |
241-294 |
nD2 |
196-300 |
105 |
e1h5pA1 |
1H5P |
4.2.1 |
0.85 |
0.0 |
0.0 |
4.9|5.3|1 |
0.759 |
1.117 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SAND |
SAND |
3 |
7 |
no |
no |
PF14277 |
A0A316SMS3 |
6-169 |
nD2 |
106-165 |
60 |
e2k49A2 |
2K49 |
4325.1.1 |
0.851 |
0.0 |
0.518 |
4.1|4.1|1 |
0.875 |
1.034 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
2 |
3 |
no |
no |
PF14293 |
A0A1M6MRF6 |
5-149 |
nD1 |
1-150 |
150 |
e5doqB2 |
5DOQ |
5069.1.1 |
0.926 |
0.0 |
0.0 |
7.0|7.0|1 |
0.802 |
0.708 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
4 |
0 |
no |
yes:4 |
PF14293 |
A0A1G4Q0Y6 |
5-148 |
nD1 |
1-155 |
155 |
e7oseE2 |
7OSE |
5069.1.1 |
0.888 |
0.0 |
0.0 |
6.5|6.5|1 |
0.743 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
5 |
1 |
no |
yes:4 |
PF14301 |
U7TUR8 |
59-161 |
nD2 |
51-165 |
115 |
e3aeiB1 |
3AEI |
192.2.1 |
0.887 |
0.0 |
0.0 |
7.0|7.0|1 |
0.938 |
1.075 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
4 |
4 |
no |
no |
PF14301 |
C7XPJ0 |
59-161 |
nD2 |
51-165 |
115 |
e3aeiB1 |
3AEI |
192.2.1 |
0.887 |
0.0 |
0.0 |
6.9|6.9|1 |
0.938 |
1.075 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Prefoldin |
Prefoldin |
4 |
4 |
no |
no |
PF14302 |
A0A1C3ER83 |
5-76 |
nD1 |
1-80 |
80 |
e7qepS41 |
7QEP |
2.1.1 |
0.891 |
0.0 |
0.0 |
3.2|3.5|1 |
0.901 |
0.769 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
6 |
no |
no |
PF14312 |
C1N5I2 |
197-244 |
nD2 |
31-304 |
274 |
e6rxxUQ1 |
6RXX |
5.1.5 |
0.868 |
0.0 |
0.0 |
13.9|25.5|0 |
0.895 |
0.704 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
8-bladed |
0 |
19 |
no |
no |
PF14315 |
E6WUB2 |
32-324 |
nD1 |
21-345 |
325 |
e1k1xB1 |
1K1X |
12.3.1 |
0.93 |
0.937 |
0.997 |
15.0|20.0|1 |
0.92 |
1.157 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
3 |
19 |
yes:in |
no |
PF14316 |
M1FHP7 |
15-163 |
nD2 |
61-170 |
110 |
e3mfnB1 |
3MFN |
601.7.1 |
0.941 |
0.0 |
0.0 |
7.1|7.2|1 |
0.866 |
0.78 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
yes:out |
PF14316 |
A0A7Y7VPF8 |
11-140 |
nD2 |
56-145 |
90 |
e1uurA2 |
1UUR |
108.1.1 |
0.871 |
0.0 |
0.0 |
4.1|4.7|0 |
0.781 |
1.011 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
4 |
0 |
no |
yes:out |
PF14321 |
F5Y3Y5 |
31-184 |
nD1 |
31-190 |
160 |
e4qb7A2 |
4QB7 |
11.1.4 |
0.935 |
0.0 |
0.0 |
7.2|7.2|1 |
0.875 |
1.28 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
3 |
9 |
yes:out |
no |
PF14326 |
A0A158E5Y8 |
24-97 |
nD1 |
1-160 |
160 |
e2pn5A8 |
2PN5 |
11.1.1 |
0.923 |
0.0 |
0.854 |
7.1|9.0|1 |
0.964 |
1.481 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
9 |
no |
no |
PF14329 |
A0A3N5V4K7 |
6-219 |
nD1 |
1-225 |
225 |
e7d5iB2 |
7D5I |
5069.1.1 |
0.868 |
0.078 |
0.085 |
5.1|7.6|0 |
0.869 |
1.061 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
0 |
no |
yes:6 |
PF14329 |
A0A3N5RFF1 |
6-219 |
nD1 |
1-225 |
225 |
e6egcA1 |
6EGC |
192.29.1 |
0.93 |
0.0 |
0.0 |
7.7|7.7|1 |
0.908 |
2.961 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
yes:6 |
PF14330 |
G0FW27 |
6-101 |
nD1 |
6-105 |
100 |
e7aoeA2 |
7AOE |
4955.1.1 |
0.852 |
0.0 |
0.0 |
5.4|5.6|1 |
0.795 |
0.855 |
pymol |
more |
good_domain |
a+b two layers |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
4 |
3 |
no |
no |
PF14330 |
B8E0H1 |
5-102 |
nD1 |
1-105 |
105 |
e7aoeA2 |
7AOE |
4955.1.1 |
0.89 |
0.0 |
0.0 |
6.7|6.7|1 |
0.849 |
0.897 |
pymol |
more |
good_domain |
a+b two layers |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
5 |
4 |
no |
no |
PF14330 |
A0A845BCW6 |
4-100 |
nD1 |
1-103 |
103 |
e7aoeA2 |
7AOE |
4955.1.1 |
0.854 |
0.0 |
0.0 |
5.9|6.3|1 |
0.83 |
0.88 |
pymol |
more |
good_domain |
a+b two layers |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit |
3 |
3 |
no |
no |
PF14339 |
A0A519PFP7 |
9-251 |
nD1 |
1-255 |
255 |
e3mbrX1 |
3MBR |
5.1.4 |
0.897 |
0.0 |
0.113 |
15.7|17.2|0 |
0.882 |
0.71 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
17 |
no |
no |
PF14339 |
A0A4Q9H1A8 |
9-255 |
nD1 |
1-258 |
258 |
e3mbrX1 |
3MBR |
5.1.4 |
0.894 |
0.0 |
0.007 |
15.5|17.5|0 |
0.888 |
0.719 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
18 |
no |
no |
PF14347 |
A0A381QSI3 |
1-83 |
nD1 |
1-80 |
80 |
e3va6A3 |
3VA6 |
11.1.1 |
0.912 |
0.961 |
0.953 |
3.4|4.8|1 |
0.56 |
0.741 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
4 |
no |
no |
PF14351 |
F4GMT9 |
325-648 |
nD1 |
16-40,156-400,406-655 |
520 |
e5hb4B1 |
5HB4 |
109.4.1 |
0.89 |
0.0 |
0.0 |
6.3|8.7|1 |
0.387 |
1.818 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
19 |
0 |
no |
yes:18 |
PF14351 |
A0A0W7TZI4 |
24-324 |
nD1 |
26-235,256-295 |
250 |
e7rdrC2 |
7RDR |
109.3.1 |
0.917 |
0.0 |
0.0 |
6.7|6.7|1 |
0.704 |
1.256 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
9 |
0 |
no |
yes:8 |
PF14351 |
A0A7V2WFC4 |
40-350 |
nD2 |
41-355 |
315 |
e6e9vB1 |
6E9V |
109.3.1 |
0.914 |
0.0 |
0.0 |
8.8|8.8|1 |
0.578 |
1.583 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
12 |
0 |
no |
yes:11 |
PF14353 |
R6MSL7 |
9-129 |
nD1 |
1-74 |
74 |
e2nb9A1 |
2NB9 |
375.1.1 |
0.921 |
0.952 |
0.973 |
2.8|2.8|1 |
0.86 |
1.321 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
6 |
no |
no |
PF14357 |
A0A1V4WMN3 |
28-110 |
nD1 |
1-110 |
110 |
e2jswA1 |
2JSW |
601.1.2 |
0.892 |
0.0 |
0.0 |
9.3|9.3|1 |
0.693 |
0.667 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
no |
PF14357 |
A0A1F9DFN7 |
4-84 |
nD1 |
1-80 |
80 |
e4zv0B1 |
4ZV0 |
633.28.1 |
0.943 |
0.564 |
0.524 |
9.2|9.2|1 |
0.839 |
0.851 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Tsi6 |
Tsi6 |
4 |
0 |
no |
no |
PF14357 |
A0A1V6CMS6 |
28-110 |
nD1 |
1-105 |
105 |
e2jswA1 |
2JSW |
601.1.2 |
0.897 |
0.0 |
0.0 |
9.3|9.3|1 |
0.676 |
0.636 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
no |
PF14362 |
A0A066U957 |
20-351 |
nD2 |
126-295 |
170 |
e3k29A1 |
3K29 |
3755.1.1 |
0.933 |
0.0 |
0.314 |
8.7|8.7|1 |
0.8 |
1.097 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Putative type III secretion protein YscO-related |
Putative type III secretion protein YscO-related |
5 |
1 |
no |
yes:out |
PF14373 |
A0A7C1Q649 |
12-51 |
nD1 |
6-55 |
50 |
e4kjmB2 |
4KJM |
632.2.1 |
0.91 |
0.0 |
0.0 |
4.8|4.8|1 |
0.866 |
0.826 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
3 |
0 |
yes:in |
yes:1 |
PF14376 |
A0A2R7P072 |
12-142 |
nD1 |
6-150 |
145 |
e4woyA2 |
4WOY |
102.1.3 |
0.925 |
0.0 |
0.0 |
4.2|4.2|1 |
0.785 |
0.954 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
PAP/OAS1 substrate-binding domain |
7 |
0 |
yes:in |
no |
PF14376 |
A0A0D5BRW4 |
11-142 |
nD1 |
6-150 |
145 |
e1jmxA5 |
1JMX |
107.1.1 |
0.933 |
0.927 |
0.98 |
2.9|4.0|0 |
0.702 |
1.266 |
pymol |
more |
good_domain |
alpha arrays |
Cytochrome c-like |
Cytochrome c |
Cytochrome c |
6 |
0 |
yes:in |
no |
PF14381 |
D7LIU8 |
112-304 |
nD1 |
111-139,166-315 |
179 |
e4xz7A3 |
4XZ7 |
219.1.1 |
0.943 |
0.621 |
0.893 |
5.6|7.3|1 |
0.779 |
0.799 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
7 |
no |
no |
PF14385 |
A0A432PVM0 |
4-165 |
nD1 |
1-173 |
173 |
e5etpA1 |
5ETP |
304.45.1 |
0.928 |
0.882 |
0.841 |
9.0|9.0|1 |
0.804 |
1.078 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
4 |
8 |
no |
no |
PF14385 |
A0A2H6AF69 |
8-168 |
nD1 |
6-170 |
165 |
e2qx0B1 |
2QX0 |
304.45.1 |
0.917 |
0.834 |
0.841 |
8.6|9.0|1 |
0.748 |
1.028 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
3 |
8 |
no |
no |
PF14385 |
A0A847JPP4 |
10-166 |
nD1 |
6-178 |
173 |
e3qbcB1 |
3QBC |
304.45.1 |
0.905 |
0.798 |
0.838 |
8.6|8.6|1 |
0.774 |
1.078 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
3 |
8 |
no |
no |
PF14387 |
D8FH06 |
12-125 |
nD1 |
1-130 |
130 |
e6qvhA1 |
6QVH |
633.21.1 |
0.876 |
0.0 |
0.0 |
11.2|12.5|0 |
0.945 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
4 |
0 |
no |
yes:4 |
PF14387 |
A0A2X1ZTB4 |
12-125 |
nD1 |
1-130 |
130 |
e6qvhA1 |
6QVH |
633.21.1 |
0.92 |
0.0 |
0.0 |
12.3|12.3|1 |
0.934 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
4 |
0 |
no |
yes:4 |
PF14390 |
A1S284 |
10-319 |
nD1 |
6-140 |
135 |
e3ju0A1 |
3JU0 |
252.2.1 |
0.928 |
0.0 |
0.0 |
5.7|6.2|0 |
0.948 |
1.957 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
GCC-box binding domain-like |
GCC-box binding domain-like |
3 |
5 |
no |
no |
PF14392 |
A0A6J0L0N1 |
161-209 |
nD2 |
106-210 |
105 |
e2dnqA1 |
2DNQ |
304.9.1 |
0.913 |
0.0 |
0.0 |
6.0|6.5|1 |
0.908 |
1.105 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
2 |
5 |
no |
no |
PF14392 |
A0A6J0JJR8 |
161-209 |
nD2 |
106-205 |
100 |
e6sxwA1 |
6SXW |
304.9.1 |
0.892 |
0.0 |
0.0 |
5.2|5.4|1 |
0.915 |
1.053 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
1 |
5 |
no |
no |
PF14401 |
Q9I2G0 |
26-177 |
nD1 |
1-80 |
80 |
e3vpdA2 |
3VPD |
2003.1.10 |
0.89 |
0.0 |
0.0 |
6.1|6.2|1 |
0.773 |
0.737 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
PreATP-grasp domain |
3 |
4 |
no |
no |
PF14401 |
A0A2P6CBE8 |
26-169 |
nD1 |
1-80 |
80 |
e3vpbC2 |
3VPB |
2003.1.10 |
0.909 |
0.0 |
0.0 |
8.1|8.7|1 |
0.849 |
0.737 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
PreATP-grasp domain |
3 |
4 |
no |
no |
PF14401 |
A0A2K8VJH9 |
26-169 |
nD1 |
1-80 |
80 |
e3vpbC2 |
3VPB |
2003.1.10 |
0.908 |
0.0 |
0.0 |
8.1|8.1|1 |
0.86 |
0.737 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
PreATP-grasp domain |
3 |
4 |
no |
no |
PF14402 |
A0A023BQS9 |
284-520 |
nD3 |
6-30,321-520 |
225 |
e4p6vD1 |
4P6V |
3921.1.1 |
0.855 |
0.241 |
0.333 |
6.4|6.4|1 |
0.711 |
1.136 |
pymol |
more |
good_domain |
alpha complex topology |
Na(+)-translocating NADH-quinone reductase subunit D |
Na(+)-translocating NADH-quinone reductase subunit D |
Na(+)-translocating NADH-quinone reductase subunit D |
10 |
1 |
no |
yes:7 |
PF14420 |
A7F1V4 |
120-173 |
nD1 |
121-175 |
55 |
e5unkA1 |
5UNK |
101.1.1 |
0.916 |
0.0 |
0.355 |
2.6|3.6|0 |
0.924 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF14424 |
H6NNJ5 |
212-354 |
nD2 |
196-355 |
160 |
e1wkqA1 |
1WKQ |
2492.1.1 |
0.855 |
0.0 |
0.306 |
6.5|6.6|1 |
0.855 |
0.988 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
5 |
no |
no |
PF14424 |
B7JLR3 |
19-155 |
nD1 |
6-160 |
155 |
e3bh1D2 |
3BH1 |
2492.1.1 |
0.908 |
0.0 |
0.011 |
4.7|6.4|1 |
0.928 |
0.957 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
6 |
no |
no |
PF14424 |
A0A0B5N9J9 |
19-155 |
nD1 |
13-160 |
148 |
e1wkqA1 |
1WKQ |
2492.1.1 |
0.901 |
0.0 |
0.011 |
6.4|6.4|1 |
0.819 |
0.914 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
6 |
no |
no |
PF14425 |
A0A328KXX5 |
1-117 |
nD1 |
1-115 |
115 |
e6g7cC1 |
6G7C |
109.4.1 |
0.936 |
0.283 |
0.379 |
5.9|5.9|1 |
0.927 |
0.402 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
2 |
no |
no |
PF14427 |
A0A1I5RT66 |
102-212 |
nD2 |
91-210 |
120 |
e1wkqA1 |
1WKQ |
2492.1.1 |
0.89 |
0.0 |
0.0 |
4.5|7.2|1 |
0.761 |
0.741 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
2 |
5 |
no |
no |
PF14427 |
A0A545TEF8 |
218-323 |
nD1 |
206-320 |
115 |
e5k83A1 |
5K83 |
2492.1.1 |
0.87 |
0.0 |
0.093 |
6.9|6.9|1 |
0.671 |
0.71 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
2 |
5 |
no |
no |
PF14427 |
A5W3N8 |
740-859 |
nD3 |
746-855 |
110 |
e3dmoD1 |
3DMO |
2492.1.1 |
0.941 |
0.0 |
0.0 |
6.6|6.7|1 |
0.727 |
0.679 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
5 |
no |
no |
PF14431 |
A9GLF7 |
535-666 |
nD2 |
576-669 |
94 |
e7lhyA1 |
7LHY |
633.1.1 |
0.862 |
0.0 |
0.0 |
3.1|3.1|1 |
0.64 |
0.777 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Bromodomain |
Bromodomain |
4 |
0 |
no |
no |
PF14441 |
A0A1B8E0X6 |
290-349 |
nD2 |
1-120,256-389 |
254 |
e2z3iC1 |
2Z3I |
2492.1.1 |
0.945 |
0.311 |
0.617 |
5.6|5.6|1 |
0.851 |
1.568 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
7 |
5 |
no |
no |
PF14441 |
A0A6G1LYM8 |
317-381 |
nD2 |
1-105,291-420 |
235 |
e2z3iC1 |
2Z3I |
2492.1.1 |
0.912 |
0.26 |
0.601 |
3.7|3.7|1 |
0.831 |
1.451 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
5 |
4 |
no |
no |
PF14443 |
A7USF0 |
399-517 |
nD2 |
406-500,716-750 |
130 |
e3hhjB1 |
3HHJ |
221.4.1 |
0.851 |
0.0 |
0.0 |
7.4|7.5|1 |
0.716 |
0.844 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
4 |
7 |
no |
no |
PF14443 |
A0A7J7TRW7 |
126-248 |
nD1 |
26-230,371-405 |
240 |
e5lf8A1 |
5LF8 |
221.4.1 |
0.91 |
0.0 |
0.233 |
7.2|7.8|1 |
0.897 |
1.558 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
8 |
12 |
no |
yes:out |
PF14444 |
A0A6J1NTX1 |
221-274 |
nD2 |
141-280 |
140 |
e6y6mA2 |
6Y6M |
2.1.1 |
0.947 |
0.904 |
0.813 |
6.1|8.8|1 |
0.824 |
1.346 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
10 |
no |
no |
PF14446 |
R6IX88 |
4-55 |
nD1 |
6-55 |
50 |
e5ywrB1 |
5YWR |
376.1.1 |
0.86 |
0.0 |
0.363 |
4.4|4.4|1 |
0.826 |
0.641 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
2 |
2 |
no |
yes:out |
PF14446 |
R6QRD2 |
2-55 |
nD1 |
1-55 |
55 |
e5ywrB1 |
5YWR |
376.1.1 |
0.935 |
0.0 |
0.345 |
5.1|5.1|1 |
0.879 |
0.705 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
2 |
2 |
no |
yes:out |
PF14446 |
R6Y3H6 |
3-56 |
nD1 |
1-50 |
50 |
e5ywrB1 |
5YWR |
376.1.1 |
0.916 |
0.0 |
0.602 |
5.2|5.2|1 |
0.879 |
0.641 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
1 |
2 |
no |
yes:out |
PF14454 |
I4A2G6 |
4-70 |
nD1 |
6-65 |
60 |
e1xf5L1 |
1XF5 |
221.3.1 |
0.903 |
0.0 |
0.0 |
4.7|4.7|1 |
0.813 |
0.984 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Immunoglobulin-binding domains |
Immunoglobulin-binding domains |
1 |
4 |
no |
no |
PF14455 |
A0A1B9YGK3 |
7-182 |
nD1 |
11-185 |
175 |
e2yz0A1 |
2YZ0 |
216.1.1 |
0.901 |
0.271 |
0.114 |
6.7|9.2|1 |
0.739 |
1.148 |
pymol |
more |
good_domain |
a+b two layers |
UBC-like |
UBC-like |
UBC-like |
3 |
6 |
no |
no |
PF14456 |
A0A375DCT8 |
28-321 |
nD1 |
6-145,203-320 |
258 |
e3l39A1 |
3L39 |
604.5.1 |
0.928 |
0.0 |
0.0 |
3.0|3.0|1 |
0.491 |
2.389 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
10 |
6 |
yes:in |
no |
PF14469 |
A0A3B4TUZ8 |
5-123 |
nD1 |
1-125 |
125 |
e5boiA3 |
5BOI |
243.3.1 |
0.916 |
0.0 |
0.0 |
5.1|5.4|0 |
0.921 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
no |
no |
PF14476 |
I1KZU0 |
92-405 |
nD2 |
116-170,296-350 |
110 |
e6egcA1 |
6EGC |
192.29.1 |
0.949 |
0.0 |
0.0 |
10.0|10.0|1 |
0.764 |
1.447 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
no |
PF14476 |
A0A6A1W9C3 |
1-301 |
nD2 |
6-70,186-250 |
130 |
e6egcA1 |
6EGC |
192.29.1 |
0.945 |
0.0 |
0.0 |
9.8|9.8|1 |
0.858 |
1.711 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:2 |
PF14480 |
Q8DRA5 |
5-71 |
nD1 |
1-85 |
85 |
e4tpsD1 |
4TPS |
327.10.1 |
0.902 |
0.0 |
0.0 |
6.3|6.3|1 |
0.854 |
0.846 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ribosome-binding factor A (RbfA)-related |
Ribosome-binding factor A (RbfA)-related |
2 |
3 |
no |
no |
PF14480 |
Q9KA72 |
11-83 |
nD1 |
1-90 |
90 |
e4tpsD1 |
4TPS |
327.10.1 |
0.938 |
0.0 |
0.0 |
6.2|6.2|1 |
0.916 |
0.896 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ribosome-binding factor A (RbfA)-related |
Ribosome-binding factor A (RbfA)-related |
3 |
3 |
no |
no |
PF14480 |
A0A447UFM5 |
4-76 |
nD1 |
1-85 |
85 |
e2wp0D1 |
2WP0 |
327.10.1 |
0.894 |
0.0 |
0.0 |
5.2|5.8|1 |
0.872 |
0.846 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ribosome-binding factor A (RbfA)-related |
Ribosome-binding factor A (RbfA)-related |
2 |
3 |
no |
no |
PF14494 |
A0A7H1BK80 |
32-279 |
nD2 |
51-185 |
135 |
e5axhB1 |
5AXH |
11.1.1 |
0.875 |
0.0 |
0.295 |
5.5|7.3|0 |
0.903 |
1.25 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
9 |
yes:out |
yes:out |
PF14494 |
A0A7W9KBB0 |
32-271 |
nD1 |
36-180 |
145 |
e6cnjD1 |
6CNJ |
11.12.1 |
0.915 |
0.966 |
0.933 |
7.5|7.9|1 |
0.563 |
0.687 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Nicotinic receptor ligand binding domain-like |
Nicotinic receptor ligand binding domain-like |
2 |
10 |
yes:out |
yes:out |
PF14494 |
A0A7W9KBB0 |
32-271 |
nD2 |
181-275 |
95 |
e2lrkC1 |
2LRK |
604.10.1 |
0.859 |
0.0 |
0.0 |
9.9|9.9|1 |
0.834 |
0.918 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Enzyme IIa from lactose specific PTS, IIa-lac |
Enzyme IIa from lactose specific PTS, IIa-lac |
3 |
1 |
yes:out |
yes:3 |
PF14494 |
A0A3M2M789 |
39-270 |
nD2 |
36-180 |
145 |
e6hugD1 |
6HUG |
11.12.1 |
0.928 |
0.956 |
0.894 |
7.7|7.7|1 |
0.575 |
0.687 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Nicotinic receptor ligand binding domain-like |
Nicotinic receptor ligand binding domain-like |
2 |
10 |
yes:out |
yes:out |
PF14494 |
A0A3M2M789 |
39-270 |
nD3 |
181-275 |
95 |
e2lrkC1 |
2LRK |
604.10.1 |
0.87 |
0.0 |
0.0 |
9.6|9.6|1 |
0.884 |
0.918 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Enzyme IIa from lactose specific PTS, IIa-lac |
Enzyme IIa from lactose specific PTS, IIa-lac |
3 |
1 |
yes:out |
yes:3 |
PF14516 |
B1XZU8 |
170-495 |
nD4 |
441-500 |
60 |
e2qbyB4 |
2QBY |
101.1.2 |
0.948 |
0.992 |
0.39 |
5.9|5.9|1 |
0.675 |
0.632 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
2 |
no |
no |
PF14550 |
C4ZCA6 |
28-152 |
nD1 |
36-150 |
115 |
e3anuA4 |
3ANU |
1.1.7 |
0.868 |
0.0 |
0.0 |
3.5|10.4|0 |
0.613 |
1.036 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Alanine racemase-C |
4 |
5 |
no |
no |
PF14550 |
A8FGQ7 |
40-155 |
nD1 |
51-155 |
105 |
e4k0eC8 |
4K0E |
304.28.1 |
0.938 |
0.0 |
0.0 |
3.9|7.7|0 |
0.879 |
1.01 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ferredoxin domains in multidrug efflux transporter |
Multidrug efflux transporter AcrB pore domain |
2 |
6 |
no |
no |
PF14576 |
E2FKI5 |
26-311 |
nD2 |
46-60,96-155,181-290 |
185 |
e6xssD1 |
6XSS |
109.3.1 |
0.926 |
0.0 |
0.0 |
10.9|10.9|1 |
0.557 |
0.93 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
1 |
no |
yes:1 |
PF14576 |
B9SLU1 |
24-294 |
nD1 |
26-275 |
250 |
e6xssD1 |
6XSS |
109.3.1 |
0.946 |
0.0 |
0.0 |
10.4|10.4|1 |
0.654 |
1.256 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
9 |
0 |
no |
yes:1 |
PF14610 |
Q6CII5 |
141-345 |
nD1 |
56-110,146-290 |
200 |
e6ysqA4 |
6YSQ |
11.1.1 |
0.934 |
0.0 |
0.0 |
5.7|5.8|1 |
0.929 |
1.852 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
13 |
yes:out |
yes:out |
PF14610 |
P36081 |
143-347 |
nD2 |
56-110,151-295 |
200 |
e4ziqA7 |
4ZIQ |
11.1.1 |
0.938 |
0.0 |
0.0 |
6.1|6.2|1 |
0.935 |
1.852 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
14 |
yes:out |
yes:out |
PF14612 |
M2T0M2 |
50-281 |
nD2 |
51-110,211-275 |
125 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.904 |
0.0 |
0.0 |
5.9|5.9|1 |
0.695 |
1.712 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
4 |
0 |
no |
no |
PF14623 |
I7M701 |
604-769 |
nD5 |
601-770 |
170 |
e1gppA1 |
1GPP |
69.1.1 |
0.949 |
0.97 |
0.744 |
10.0|14.2|1 |
0.721 |
1.037 |
pymol |
more |
good_domain |
beta complex topology |
Hedgehog/intein |
Hedgehog/intein |
Hint |
5 |
13 |
no |
no |
PF14623 |
A0A6C0L6V8 |
15-168 |
nD1 |
16-139 |
124 |
e6zgqB1 |
6ZGQ |
69.1.1 |
0.944 |
0.968 |
0.86 |
9.4|10.8|1 |
0.704 |
0.756 |
pymol |
more |
good_domain |
beta complex topology |
Hedgehog/intein |
Hedgehog/intein |
Hint |
2 |
9 |
no |
no |
PF14624 |
I7M701 |
502-571 |
nD4 |
451-560 |
110 |
e2lffA1 |
2LFF |
150.1.1 |
0.907 |
0.0 |
0.0 |
7.2|7.2|1 |
0.835 |
0.679 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
4 |
1 |
no |
no |
PF14624 |
A9UVU8 |
486-557 |
nD4 |
441-545 |
105 |
e3iqcA1 |
3IQC |
601.13.1 |
0.854 |
0.0 |
0.0 |
7.0|7.0|1 |
0.742 |
0.85 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Flagellar export chaperone FliS |
Flagellar export chaperone FliS |
4 |
0 |
no |
no |
PF14626 |
Q9NA28 |
261-384 |
nD3 |
136-240,263-480 |
323 |
e5dizA3 |
5DIZ |
2006.1.4 |
0.937 |
0.985 |
0.998 |
9.5|12.0|1 |
0.67 |
1.894 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
PIN domain-like |
11 |
13 |
no |
no |
PF14628 |
R6JJZ5 |
296-505 |
nD4 |
322-355,436-505 |
104 |
e6t8hA1 |
6T8H |
2.1.1 |
0.902 |
0.0 |
0.0 |
2.4|2.4|1 |
0.743 |
1.0 |
pymol |
na |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
4 |
5 |
no |
no |
PF14645 |
A0A212EV21 |
2-115 |
nD1 |
51-115 |
65 |
e7lt3P2 |
7LT3 |
3939.1.1 |
0.914 |
0.346 |
0.762 |
5.3|5.3|1 |
0.625 |
1.083 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
1 |
2 |
no |
no |
PF14648 |
A7RMC1 |
381-822 |
nD2 |
406-435 |
30 |
e5xj0Y1 |
5XJ0 |
7018.1.1 |
0.922 |
0.361 |
0.509 |
0.0|3.5|0 |
0.706 |
0.882 |
pymol |
na |
good_domain |
few secondary structure elements |
gp76 helical domain |
gp76 helical domain |
gp76 helical domain |
2 |
1 |
no |
no |
PF14648 |
A7RMC1 |
381-822 |
nD3 |
381-420,446-665,716-775,806-815 |
330 |
e1ehiA1 |
1EHI |
206.1.3 |
0.938 |
0.0 |
0.0 |
5.7|6.7|1 |
0.748 |
1.473 |
pymol |
na |
good_domain |
a+b complex topology |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase/SAICAR synthase/ATP-grasp |
ATP-grasp |
11 |
12 |
no |
no |
PF14649 |
A7RSC4 |
8-297 |
nD1 |
6-350 |
345 |
e6ip1E1 |
6IP1 |
109.4.1 |
0.935 |
0.0 |
0.934 |
8.7|9.9|1 |
0.41 |
1.206 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
19 |
0 |
no |
no |
PF14652 |
K1QNE3 |
68-388 |
nD2 |
251-420 |
170 |
e6wmdA1 |
6WMD |
10.1.2 |
0.947 |
0.914 |
0.929 |
4.8|8.3|1 |
0.647 |
1.083 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
4 |
8 |
no |
no |
PF14652 |
H3G7B6 |
274-600 |
nD2 |
266-425 |
160 |
e6wmdA1 |
6WMD |
10.1.2 |
0.914 |
0.926 |
0.944 |
6.0|10.5|1 |
0.641 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
8 |
no |
no |
PF14652 |
H3G7B6 |
274-600 |
nD3 |
451-595,626-635 |
155 |
e4oyuB1 |
4OYU |
10.1.2 |
0.893 |
0.618 |
0.749 |
6.1|8.6|1 |
0.595 |
0.987 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
8 |
no |
no |
PF14652 |
A7RKQ8 |
252-571 |
nD2 |
241-400 |
160 |
e6r15A1 |
6R15 |
10.1.2 |
0.911 |
0.93 |
0.934 |
6.6|10.2|1 |
0.635 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
3 |
8 |
no |
no |
PF14652 |
A7RKQ8 |
252-571 |
nD3 |
436-594 |
159 |
e6eonA4 |
6EON |
10.1.2 |
0.896 |
0.209 |
0.767 |
8.9|8.9|1 |
0.679 |
1.013 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
3 |
9 |
no |
no |
PF14657 |
A6TLJ2 |
11-55 |
nD1 |
6-50 |
45 |
e2k49A2 |
2K49 |
4325.1.1 |
0.855 |
0.359 |
0.847 |
4.7|5.7|0 |
0.775 |
0.776 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
1 |
3 |
no |
no |
PF14690 |
A5G4S1 |
43-85 |
nD1 |
41-60,76-95 |
40 |
e5t6bB1 |
5T6B |
375.1.1 |
0.934 |
0.0 |
0.908 |
2.5|2.5|1 |
0.767 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF14690 |
C8X7Q7 |
35-82 |
nD1 |
11-145 |
135 |
e5t6bB1 |
5T6B |
375.1.1 |
0.917 |
0.0 |
0.881 |
2.7|3.1|0 |
0.948 |
2.411 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
3 |
6 |
no |
no |
PF14713 |
W5LLB4 |
23-241 |
nD1 |
26-85 |
60 |
e4ldzA2 |
4LDZ |
101.1.3 |
0.929 |
0.0 |
0.0 |
3.0|3.1|0 |
0.603 |
0.876 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, LuxR-like |
4 |
0 |
no |
no |
PF14713 |
A0A068YJ86 |
14-232 |
nD1 |
6-75 |
70 |
e2fd5A1 |
2FD5 |
101.1.1 |
0.929 |
0.0 |
0.0 |
3.6|3.6|1 |
0.602 |
0.959 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
no |
no |
PF14723 |
G3NBJ0 |
745-912 |
nD2 |
786-910 |
125 |
e6m3pA2 |
6M3P |
604.1.1 |
0.909 |
0.0 |
0.0 |
8.6|9.5|0 |
0.969 |
1.136 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
no |
PF14733 |
A0A2A9MNV3 |
384-491 |
nD2 |
386-495 |
110 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.925 |
0.0 |
0.0 |
6.8|6.8|1 |
0.682 |
1.25 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
4 |
0 |
no |
no |
PF14751 |
W0E8B4 |
8-248 |
nD1 |
6-225 |
220 |
e6dxuC3 |
6DXU |
11.1.1 |
0.859 |
0.0 |
0.0 |
3.0|3.7|1 |
0.815 |
2.037 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
8 |
12 |
no |
yes:out |
PF14751 |
J7IVE8 |
22-262 |
nD1 |
31-240 |
210 |
e3lzqB1 |
3LZQ |
11.1.1 |
0.937 |
0.0 |
0.0 |
3.5|3.7|1 |
0.831 |
1.944 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
6 |
11 |
no |
yes:out |
PF14751 |
A0A7V7QKZ0 |
46-286 |
nD2 |
56-255 |
200 |
e4ruwA2 |
4RUW |
11.1.1 |
0.944 |
0.0 |
0.0 |
3.8|4.3|1 |
0.911 |
1.852 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
4 |
13 |
no |
yes:out |
PF14761 |
F6X0B3 |
2-468 |
nD2 |
1-15,301-440,476-620 |
300 |
e3fw0A1 |
3FW0 |
5.1.3 |
0.937 |
0.0 |
0.0 |
13.2|13.2|1 |
0.413 |
0.867 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
8 |
11 |
no |
no |
PF14761 |
A0A673VKA7 |
3-453 |
nD1 |
1-215,261-555 |
510 |
e6tjhA1 |
6TJH |
5.1.4 |
0.856 |
0.0 |
0.953 |
9.6|25.0|1 |
0.333 |
1.421 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
7 |
30 |
no |
no |
PF14763 |
A0A096LXJ5 |
71-583 |
nD2 |
206-355 |
150 |
e3uq3A2 |
3UQ3 |
109.4.1 |
0.934 |
0.354 |
0.958 |
5.9|8.1|1 |
0.782 |
0.524 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
2 |
no |
no |
PF14764 |
A0A7N8YF28 |
45-162 |
nD1 |
6-500 |
495 |
e4owtA1 |
4OWT |
109.4.1 |
0.873 |
0.0 |
0.78 |
7.3|12.5|1 |
0.509 |
1.731 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
18 |
0 |
no |
no |
PF14766 |
W5M4K0 |
6-44 |
nD1 |
6-80,101-140 |
115 |
e7emfU1 |
7EMF |
4207.1.1 |
0.875 |
0.0 |
0.0 |
5.4|5.5|0 |
0.811 |
0.852 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
RNA polymerase II holoenzyme component SRB7 (MED21) |
4 |
0 |
no |
no |
PF14767 |
W5M4K0 |
57-134 |
nD1 |
6-80,101-140 |
115 |
e7emfU1 |
7EMF |
4207.1.1 |
0.875 |
0.0 |
0.0 |
5.4|5.5|0 |
0.811 |
0.852 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
RNA polymerase II holoenzyme component SRB7 (MED21) |
4 |
0 |
no |
no |
PF14768 |
C3YXN5 |
145-224 |
nD3 |
141-190 |
50 |
e2fiyA1 |
2FIY |
375.1.1 |
0.85 |
0.823 |
0.941 |
0.0|4.5|0 |
0.828 |
0.893 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF14768 |
C3YXN5 |
145-224 |
nD4 |
191-225 |
35 |
e6sw981 |
6SW9 |
375.8.1 |
0.867 |
0.367 |
0.291 |
0.0|4.7|0 |
0.797 |
0.833 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Zinc-binding domain of translation initiation factor 2 beta |
Zinc-binding domain of translation initiation factor 2 beta |
0 |
3 |
no |
no |
PF14768 |
W5M4K0 |
144-224 |
nD2 |
141-170 |
30 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.942 |
0.885 |
0.938 |
0.0|4.6|0 |
0.708 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF14768 |
M4F1G6 |
158-239 |
nD2 |
156-205 |
50 |
e2aqcA2 |
2AQC |
375.4.1 |
0.902 |
0.944 |
0.828 |
0.0|3.3|0 |
0.49 |
0.833 |
pymol |
na |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Nucleolar RNA-binding protein Nop10-like |
Nucleolar RNA-binding protein Nop10-like |
1 |
3 |
no |
no |
PF14768 |
M4F1G6 |
158-239 |
nD3 |
206-240 |
35 |
e2fiyA2 |
2FIY |
375.1.1 |
0.948 |
0.876 |
0.574 |
0.0|3.3|0 |
0.679 |
0.625 |
pymol |
na |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF14770 |
L1K301 |
9-121 |
nD1 |
6-120 |
115 |
e1fpoB2 |
1FPO |
622.1.1 |
0.949 |
0.0 |
0.0 |
8.4|8.4|1 |
0.939 |
1.307 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
4 |
0 |
no |
yes:3 |
PF14778 |
A0A480EIY3 |
28-388 |
nD2 |
176-383 |
208 |
e5ejjA2 |
5EJJ |
3346.1.1 |
0.902 |
0.969 |
0.0 |
8.6|9.7|1 |
0.81 |
0.924 |
pymol |
more |
good_domain |
a+b two layers |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
3 |
7 |
no |
yes:out |
PF14778 |
H3CDR0 |
28-369 |
nD2 |
166-365 |
200 |
e5ejjA2 |
5EJJ |
3346.1.1 |
0.899 |
0.977 |
0.631 |
8.8|9.4|1 |
0.835 |
0.889 |
pymol |
more |
good_domain |
a+b two layers |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
3 |
7 |
no |
no |
PF14778 |
A0A182PDU1 |
27-377 |
nD2 |
171-373 |
203 |
e5ejjA2 |
5EJJ |
3346.1.1 |
0.884 |
0.976 |
0.763 |
8.3|9.5|1 |
0.807 |
0.902 |
pymol |
more |
good_domain |
a+b two layers |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 |
4 |
8 |
no |
yes:out |
PF14780 |
F6RUJ5 |
6-195 |
nD1 |
6-235 |
230 |
e6wvdA2 |
6WVD |
174.1.1 |
0.932 |
0.0 |
0.0 |
10.5|11.3|0 |
0.914 |
1.575 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
7 |
2 |
no |
no |
PF14780 |
H3AJM9 |
12-203 |
nD1 |
36-240 |
205 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.877 |
0.0 |
0.0 |
10.7|10.7|1 |
0.808 |
1.265 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
6 |
1 |
no |
yes:1 |
PF14780 |
A0A7M7GCL9 |
5-185 |
nD1 |
6-220 |
215 |
e6wvdA2 |
6WVD |
174.1.1 |
0.909 |
0.0 |
0.0 |
10.9|13.3|0 |
0.898 |
1.473 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
3 |
no |
no |
PF14802 |
H0X9V8 |
26-259 |
nD1 |
41-200 |
160 |
e4uosA1 |
4UOS |
601.19.1 |
0.908 |
0.0 |
0.0 |
12.4|12.4|1 |
0.789 |
0.664 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
4 |
0 |
no |
yes:4 |
PF14808 |
G4VQU6 |
24-246 |
nD1 |
6-255 |
250 |
e6z0cC1 |
6Z0C |
150.1.1 |
0.888 |
0.0 |
0.0 |
3.8|4.5|0 |
0.53 |
1.543 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
8 |
1 |
no |
yes:6 |
PF14856 |
A0A1Y2DFA2 |
11-104 |
nD1 |
6-114 |
109 |
e1kptA1 |
1KPT |
3887.1.1 |
0.913 |
0.0 |
0.0 |
5.9|6.0|1 |
0.819 |
1.038 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
2 |
8 |
no |
no |
PF14856 |
R0KMA9 |
14-120 |
nD1 |
16-130 |
115 |
e5v6jD1 |
5V6J |
3887.1.1 |
0.905 |
0.0 |
0.0 |
5.4|5.8|1 |
0.83 |
1.095 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
2 |
6 |
no |
no |
PF14857 |
E9QHN6 |
56-503 |
nD1 |
61-95,126-155,311-340 |
95 |
e7emfU1 |
7EMF |
4207.1.1 |
0.905 |
0.0 |
0.0 |
6.8|7.0|1 |
0.492 |
0.704 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
RNA polymerase II holoenzyme component SRB7 (MED21) |
4 |
1 |
yes:out |
yes:3 |
PF14857 |
E7F9L1 |
21-502 |
nD1 |
26-60,106-135,286-315 |
95 |
e7emfU1 |
7EMF |
4207.1.1 |
0.892 |
0.0 |
0.0 |
5.4|5.4|1 |
0.491 |
0.704 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
RNA polymerase II holoenzyme component SRB7 (MED21) |
4 |
2 |
no |
yes:3 |
PF14876 |
A7TMV3 |
75-278 |
nD1 |
76-180 |
105 |
e2djrA1 |
2DJR |
386.1.1 |
0.925 |
0.0 |
0.073 |
4.4|4.4|1 |
0.855 |
3.182 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
3 |
3 |
no |
no |
PF14877 |
G8ZZB9 |
84-256 |
nD1 |
96-185 |
90 |
e4xz7B2 |
4XZ7 |
221.12.1 |
0.853 |
0.0 |
0.0 |
3.9|3.9|1 |
0.808 |
1.154 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
beta-grasp fold domain in a transglutaminase |
beta-grasp fold domain in a transglutaminase |
3 |
4 |
no |
no |
PF14879 |
Q0AZA9 |
23-192 |
nD1 |
21-115,146-199 |
149 |
e2wq4A1 |
2WQ4 |
10.3.1 |
0.888 |
0.0 |
0.0 |
9.6|9.6|1 |
0.891 |
1.049 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
TNF-like |
TNF-like |
0 |
7 |
no |
no |
PF14879 |
M1MLX3 |
37-175 |
nD1 |
36-175 |
140 |
e2wq4A1 |
2WQ4 |
10.3.1 |
0.938 |
0.0 |
0.0 |
8.9|9.2|1 |
0.915 |
0.986 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
TNF-like |
TNF-like |
0 |
9 |
no |
no |
PF14891 |
D3Q7Q3 |
516-717 |
nD3 |
491-720 |
230 |
e3fieA1 |
3FIE |
2498.1.1 |
0.943 |
0.998 |
0.999 |
10.9|15.8|0 |
0.654 |
0.916 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
5 |
no |
no |
PF14895 |
G3T0P3 |
53-402 |
nD1 |
106-260,301-310,351-370 |
185 |
e5f5pA1 |
5F5P |
1203.1.2 |
0.921 |
0.0 |
0.0 |
6.4|6.4|1 |
0.653 |
1.022 |
pymol |
more |
good_domain |
alpha bundles |
Shroom domain 2 |
Shroom domain 2 |
Human SD2 |
6 |
0 |
no |
no |
PF14902 |
A0A1Q6HQR1 |
3-131 |
nD1 |
1-65 |
65 |
e5xy3S1 |
5XY3 |
3115.1.1 |
0.891 |
0.0 |
0.0 |
5.1|5.6|1 |
0.854 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
4 |
no |
no |
PF14902 |
A0A1Q6HQR1 |
3-131 |
nD2 |
66-130 |
65 |
e5t5hS2 |
5T5H |
3115.1.1 |
0.901 |
0.0 |
0.0 |
4.2|4.7|1 |
0.89 |
0.833 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF14902 |
A0A414Q822 |
3-131 |
nD1 |
1-60 |
60 |
e4njcA1 |
4NJC |
3115.6.1 |
0.911 |
0.0 |
0.0 |
4.4|6.1|0 |
0.943 |
0.93 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
Bacterial RNA polymerase subunit epsilon |
Bacterial RNA polymerase subunit epsilon |
1 |
4 |
no |
no |
PF14902 |
A0A414Q822 |
3-131 |
nD2 |
61-130 |
70 |
e5xy3S1 |
5XY3 |
3115.1.1 |
0.901 |
0.0 |
0.0 |
6.2|6.5|1 |
0.906 |
0.897 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF14902 |
A0A3L8A3A2 |
4-139 |
nD2 |
66-139 |
74 |
e5xxbR2 |
5XXB |
3115.1.1 |
0.892 |
0.0 |
0.0 |
6.4|6.4|1 |
0.891 |
0.949 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
3 |
no |
no |
PF14903 |
A0A7X8BTN7 |
119-151 |
nD1 |
1-230 |
230 |
e2m3xB1 |
2M3X |
5.1.10 |
0.905 |
0.183 |
0.603 |
4.8|9.0|0 |
0.944 |
3.194 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
0 |
18 |
no |
no |
PF14903 |
R6NNL8 |
275-309 |
nD2 |
111-140,176-315 |
170 |
e5yjeB1 |
5YJE |
5.1.3 |
0.923 |
0.0 |
0.0 |
5.1|6.7|0 |
0.676 |
0.491 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
13 |
no |
yes:out |
PF14913 |
E2AB70 |
6-190 |
nD1 |
6-188 |
183 |
e5nmsD1 |
5NMS |
319.1.1 |
0.937 |
0.497 |
0.844 |
5.4|6.2|1 |
0.87 |
1.679 |
pymol |
more |
good_domain |
beta sandwiches |
HSP20-like |
HSP20-like chaperones |
HSP20-like chaperones |
5 |
12 |
no |
no |
PF14919 |
H3B7H1 |
274-606 |
nD3 |
431-500 |
70 |
e4ne1n1 |
4NE1 |
148.1.1 |
0.885 |
0.0 |
0.0 |
4.9|4.9|1 |
0.597 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
3 |
0 |
no |
no |
PF14922 |
A0A6Q2YJH5 |
46-189 |
nD2 |
31-190 |
160 |
e2bk9A1 |
2BK9 |
106.1.1 |
0.858 |
0.098 |
0.0 |
5.4|6.0|0 |
0.747 |
1.088 |
pymol |
more |
good_domain |
alpha arrays |
Globin-like |
Globin-like |
Globin-like |
6 |
0 |
no |
yes:out |
PF14926 |
D8TIV9 |
4-251 |
nD1 |
6-255 |
250 |
e2o3bB1 |
2O3B |
243.9.1 |
0.914 |
0.0 |
0.0 |
4.9|8.7|1 |
0.886 |
1.667 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Nuclease A inhibitor (NuiA)-related |
Nuclease A inhibitor (NuiA)-related |
8 |
13 |
no |
no |
PF14935 |
A0NG40 |
40-158 |
nD1 |
1-160 |
160 |
e6egcA1 |
6EGC |
192.29.1 |
0.927 |
0.0 |
0.0 |
12.3|12.3|1 |
0.932 |
2.105 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF14936 |
W5M4D9 |
31-209 |
nD1 |
81-200 |
120 |
e5goeA2 |
5GOE |
3615.1.1 |
0.942 |
0.0 |
0.0 |
6.4|6.4|1 |
0.711 |
0.342 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
4 |
0 |
no |
yes:4 |
PF14942 |
E0W4A7 |
30-171 |
nD1 |
16-65,86-120,126-150 |
110 |
e6fkfp1 |
6FKF |
5046.1.1 |
0.949 |
0.0 |
0.0 |
6.7|6.7|1 |
0.521 |
0.707 |
pymol |
more |
good_domain |
extended segments |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
3 |
0 |
no |
yes:out |
PF14942 |
A7SPE8 |
7-148 |
nD1 |
6-70,91-135 |
110 |
e7jg5b1 |
7JG5 |
5046.1.1 |
0.916 |
0.0 |
0.0 |
5.3|5.3|1 |
0.765 |
0.707 |
pymol |
more |
good_domain |
extended segments |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
4 |
0 |
no |
no |
PF14951 |
Q14159 |
521-905 |
nD4 |
796-830 |
35 |
e3u50C2 |
3U50 |
375.1.1 |
0.939 |
0.9 |
0.727 |
0.0|8.7|0 |
0.933 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF14951 |
A0A672L7K7 |
1-370 |
nD3 |
261-295 |
35 |
e3u50C2 |
3U50 |
375.1.1 |
0.922 |
0.933 |
0.886 |
0.0|9.0|0 |
0.967 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF14959 |
A0A5E4CH93 |
33-140 |
nD1 |
1-160 |
160 |
e3n71A2 |
3N71 |
109.4.1 |
0.922 |
0.0 |
0.0 |
5.0|5.1|1 |
0.676 |
0.559 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF14961 |
Q5RHR6 |
12-1293 |
nD1 |
1-155 |
155 |
e5cw4C1 |
5CW4 |
1008.1.1 |
0.918 |
0.0 |
0.0 |
4.8|6.1|0 |
0.934 |
2.039 |
pymol |
more |
good_domain |
alpha bundles |
BRCC36 C-terminal helical domain |
BRCC36 C-terminal helical domain |
BRCC36 C-terminal helical domain |
4 |
0 |
no |
yes:out |
PF14966 |
A0A6P7ZET3 |
9-105 |
nD1 |
1-150 |
150 |
e5xsjL1 |
5XSJ |
601.4.1 |
0.92 |
0.0 |
0.0 |
11.9|12.1|0 |
1.0 |
1.042 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF14966 |
A0A1W7RIW3 |
6-102 |
nD1 |
1-145 |
145 |
e3va9A1 |
3VA9 |
601.1.1 |
0.904 |
0.0 |
0.349 |
11.5|12.0|0 |
0.95 |
1.107 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
4 |
0 |
no |
no |
PF14966 |
T1DNQ1 |
6-102 |
nD1 |
1-145 |
145 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.907 |
0.508 |
0.443 |
10.7|12.1|0 |
0.977 |
1.973 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
4 |
0 |
no |
no |
PF14967 |
I3J533 |
8-347 |
nD1 |
21-115,196-230 |
130 |
e6wvdA2 |
6WVD |
174.1.1 |
0.908 |
0.29 |
0.514 |
11.4|12.0|0 |
0.83 |
0.89 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF14967 |
A0A6G0J1L2 |
550-891 |
nD4 |
556-660,736-770 |
140 |
e1xg2B1 |
1XG2 |
633.4.1 |
0.878 |
0.0 |
0.0 |
11.7|11.7|1 |
0.772 |
0.94 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Plant invertase/pectin methylesterase inhibitor |
Plant invertase/pectin methylesterase inhibitor |
4 |
0 |
no |
yes:4 |
PF14968 |
H9GKF1 |
8-343 |
nD1 |
6-45 |
40 |
e2yrkA1 |
2YRK |
386.1.1 |
0.922 |
0.894 |
0.929 |
0.0|3.4|0 |
0.741 |
1.212 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
1 |
2 |
no |
no |
PF14969 |
A0A0J7NEN0 |
8-106 |
nD1 |
6-40,66-110 |
80 |
e2p64B1 |
2P64 |
4144.2.1 |
0.917 |
0.92 |
0.838 |
3.6|4.3|0 |
0.897 |
1.524 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
YejL-like |
D domain of Cdc4 and beta-TrCP |
D domain of Cdc4 and beta-TrCP |
4 |
0 |
no |
no |
PF14969 |
A0A195CCP8 |
9-105 |
nD1 |
6-105 |
100 |
e2p64B1 |
2P64 |
4144.2.1 |
0.851 |
0.919 |
0.833 |
3.6|4.4|0 |
0.918 |
1.905 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
YejL-like |
D domain of Cdc4 and beta-TrCP |
D domain of Cdc4 and beta-TrCP |
5 |
0 |
no |
no |
PF14972 |
Q7Q721 |
21-178 |
nD2 |
61-180 |
120 |
e4p1nB2 |
4P1N |
604.12.1 |
0.872 |
0.0 |
0.0 |
8.1|9.8|0 |
0.947 |
1.387 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
2 |
no |
yes:2 |
PF14972 |
B4HUI8 |
8-163 |
nD2 |
46-165 |
120 |
e4p1nB1 |
4P1N |
604.12.1 |
0.945 |
0.0 |
0.0 |
9.4|10.6|0 |
0.919 |
1.387 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
2 |
no |
yes:3 |
PF14974 |
E2BFV6 |
8-110 |
nD1 |
6-100 |
95 |
e5b7jA1 |
5B7J |
101.1.1 |
0.927 |
0.0 |
0.483 |
4.0|4.5|0 |
0.833 |
1.301 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
no |
no |
PF14974 |
L1JLP0 |
6-102 |
nD1 |
6-100 |
95 |
e4zi2C1 |
4ZI2 |
3069.1.1 |
0.925 |
0.626 |
0.584 |
4.6|4.6|1 |
0.606 |
0.712 |
pymol |
more |
good_domain |
alpha arrays |
BART |
BART |
BART |
4 |
0 |
no |
no |
PF14977 |
G1KH04 |
426-627 |
nD2 |
431-575 |
145 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.886 |
0.0 |
0.0 |
8.2|8.2|1 |
0.841 |
0.879 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
0 |
14 |
no |
no |
PF14977 |
G1PFX2 |
349-556 |
nD4 |
66-75,361-500 |
150 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.908 |
0.0 |
0.0 |
6.6|6.8|1 |
0.832 |
0.909 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
0 |
14 |
no |
yes:out |
PF14977 |
G3X279 |
380-583 |
nD3 |
381-495 |
115 |
e2fkjA3 |
2FKJ |
77.1.1 |
0.928 |
0.0 |
0.0 |
9.1|9.1|1 |
0.879 |
0.697 |
pymol |
more |
good_domain |
beta meanders |
open-sided beta-meander |
Outer surface protein |
Outer surface protein |
0 |
10 |
no |
no |
PF14977 |
G3X279 |
380-583 |
nD5 |
546-620 |
75 |
e3nbxX3 |
3NBX |
604.18.1 |
0.851 |
0.0 |
0.0 |
6.6|6.6|1 |
0.72 |
0.915 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Triple-helical domain in regulatory ATPase variant A (RavA) |
Triple-helical domain in regulatory ATPase variant A (RavA) |
3 |
0 |
no |
no |
PF14995 |
A0A7S4EVZ3 |
6-127 |
nD1 |
6-130 |
125 |
e3ay5A2 |
3AY5 |
601.1.2 |
0.927 |
0.0 |
0.0 |
7.9|9.3|0 |
0.826 |
0.758 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
yes:4 |
PF14997 |
A0A0L8HHJ1 |
84-276 |
nD1 |
6-300 |
295 |
e6bfiA4 |
6BFI |
601.1.2 |
0.919 |
0.0 |
0.0 |
6.8|6.8|1 |
0.907 |
1.788 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
10 |
0 |
no |
yes:8 |
PF15002 |
Q177G9 |
34-225 |
nD1 |
46-195 |
150 |
e5dseD1 |
5DSE |
109.4.1 |
0.916 |
0.0 |
0.079 |
5.6|5.6|1 |
0.666 |
0.524 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
0 |
yes:out |
no |
PF15002 |
A8WVD7 |
851-1045 |
nD4 |
861-1015 |
155 |
e5odwD1 |
5ODW |
1204.1.1 |
0.854 |
0.0 |
0.0 |
6.8|6.8|1 |
0.465 |
0.783 |
pymol |
more |
good_domain |
alpha bundles |
Bacteriocin pyocin-S2 N-terminal domain |
Bacteriocin pyocin-S2 N-terminal domain |
Bacteriocin pyocin-S2 N-terminal domain |
4 |
0 |
no |
yes:out |
PF15002 |
F2UI29 |
79-277 |
nD1 |
91-245 |
155 |
e2mowA1 |
2MOW |
109.4.1 |
0.911 |
0.0 |
0.0 |
5.7|7.0|1 |
0.75 |
0.542 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
0 |
yes:out |
no |
PF15008 |
A7RT68 |
2-272 |
nD1 |
1-95 |
95 |
e5ldeB1 |
5LDE |
110.1.1 |
0.888 |
0.0 |
0.0 |
5.7|5.7|1 |
0.865 |
0.99 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
6 |
0 |
no |
no |
PF15008 |
Q16YF0 |
6-304 |
nD1 |
6-105 |
100 |
e2dbgA1 |
2DBG |
110.1.1 |
0.911 |
0.0 |
0.0 |
3.0|3.6|1 |
0.873 |
1.042 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF15008 |
B4LHD4 |
8-267 |
nD1 |
6-105 |
100 |
e2dbgA1 |
2DBG |
110.1.1 |
0.902 |
0.0 |
0.0 |
3.7|4.8|1 |
0.836 |
1.042 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF15025 |
A0A250WPL8 |
6-146 |
nD2 |
86-185 |
100 |
e6w3iB1 |
6W3I |
292.2.1 |
0.949 |
0.0 |
0.0 |
5.9|6.4|1 |
0.794 |
0.905 |
pymol |
more |
good_domain |
a+b two layers |
RIP/Polo-box domain |
Polo-box domain |
Polo-box domain |
3 |
6 |
no |
no |
PF15025 |
H2MC98 |
5-145 |
nD2 |
96-143,181-210 |
78 |
e2n19A1 |
2N19 |
292.2.1 |
0.928 |
0.0 |
0.0 |
3.4|6.3|1 |
0.815 |
0.706 |
pymol |
more |
good_domain |
a+b two layers |
RIP/Polo-box domain |
Polo-box domain |
Polo-box domain |
1 |
5 |
no |
no |
PF15030 |
G1PRR2 |
1-276 |
nD2 |
41-135 |
95 |
e6yrlD1 |
6YRL |
632.22.1 |
0.873 |
0.893 |
0.0 |
6.0|6.4|0 |
0.355 |
0.913 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
no |
PF15030 |
Q6ZRC1 |
1-274 |
nD2 |
61-130 |
70 |
e5c22A2 |
5C22 |
5086.1.1 |
0.858 |
0.0 |
0.0 |
5.5|5.5|1 |
0.465 |
0.828 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
0 |
no |
no |
PF15038 |
A0A0K0JY33 |
79-250 |
nD1 |
61-240 |
180 |
e7od1A1 |
7OD1 |
611.8.1 |
0.866 |
0.0 |
0.0 |
8.5|8.5|1 |
0.919 |
1.154 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
C-terminal domain of E3 ubiquitin-protein ligase ARIH1 |
3 |
0 |
no |
yes:4 |
PF15047 |
D2HZU5 |
14-221 |
nD1 |
1-225 |
225 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.855 |
0.0 |
0.0 |
8.8|10.0|0 |
0.767 |
3.814 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
8 |
0 |
no |
no |
PF15052 |
H2ZK07 |
23-151 |
nD1 |
36-145 |
110 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.873 |
0.0 |
0.0 |
4.7|5.8|0 |
0.935 |
1.152 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
4 |
2 |
no |
yes:2 |
PF15052 |
A0A5G2QKD0 |
142-270 |
nD1 |
146-265 |
120 |
e1fioA1 |
1FIO |
603.1.1 |
0.868 |
0.0 |
0.0 |
4.7|6.0|0 |
0.771 |
1.143 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
2 |
no |
yes:2 |
PF15053 |
Q9CYI0 |
38-390 |
nD2 |
206-390 |
185 |
e3v42B1 |
3V42 |
2004.5.1 |
0.937 |
0.424 |
0.271 |
7.9|7.9|1 |
0.729 |
0.858 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
Differentially expressed in normal cells and neoplasia (DENN) domain |
Differentially expressed in normal cells and neoplasia (DENN) domain |
8 |
3 |
no |
no |
PF15053 |
M3XLI1 |
42-387 |
nD2 |
216-385 |
170 |
e3v42B1 |
3V42 |
2004.5.1 |
0.938 |
0.48 |
0.332 |
7.5|7.5|1 |
0.66 |
0.789 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
Differentially expressed in normal cells and neoplasia (DENN) domain |
Differentially expressed in normal cells and neoplasia (DENN) domain |
7 |
3 |
no |
no |
PF15059 |
Q76KD6 |
445-591 |
nD3 |
436-460,521-590 |
95 |
e1yb4B3 |
1YB4 |
129.1.1 |
0.93 |
0.0 |
0.0 |
3.9|4.0|1 |
0.635 |
0.742 |
pymol |
more |
good_domain |
alpha arrays |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
4 |
0 |
no |
no |
PF15067 |
A0A2J8NFN9 |
10-244 |
nD1 |
66-135 |
70 |
e2zyqB14 |
2ZYQ |
211.1.1 |
0.926 |
0.973 |
0.0 |
2.0|5.4|1 |
0.748 |
1.029 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
1 |
3 |
no |
no |
PF15091 |
H0X2Y6 |
61-507 |
nD2 |
106-390 |
285 |
e4p7aA2 |
4P7A |
212.1.1 |
0.921 |
0.0 |
0.273 |
4.2|5.4|1 |
0.929 |
1.979 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
7 |
7 |
no |
no |
PF15107 |
A0A7F8RFC6 |
1-107 |
nD1 |
16-100 |
85 |
e4aybQ1 |
4AYB |
4146.1.1 |
0.854 |
0.0 |
0.0 |
6.8|6.9|0 |
0.948 |
1.7 |
pymol |
more |
good_domain |
alpha bundles |
YqgQ-like |
YqgQ-like |
YqgQ-like |
4 |
0 |
no |
no |
PF15109 |
Q96AQ2 |
18-128 |
nD1 |
31-90,111-175 |
125 |
e5goeA2 |
5GOE |
3615.1.1 |
0.876 |
0.0 |
0.0 |
9.0|9.6|0 |
0.875 |
0.356 |
pymol |
more |
good_domain |
alpha bundles |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
Bacterial dynamin-like protein helical domain |
4 |
0 |
no |
yes:4 |
PF15111 |
A0A6J8CLA6 |
7-241 |
nD1 |
1-240 |
240 |
e4o7gB1 |
4O7G |
5069.1.1 |
0.902 |
0.0 |
0.116 |
6.2|6.2|1 |
0.762 |
1.132 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
9 |
0 |
no |
yes:8 |
PF15112 |
C3YJH2 |
6-317 |
nD2 |
6-45,76-205 |
170 |
e2wbiB5 |
2WBI |
633.6.1 |
0.88 |
0.0 |
0.0 |
6.5|6.5|1 |
0.703 |
1.062 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Acyl-CoA dehydrogenase C-terminal domain-like |
Acyl-CoA dehydrogenase C-terminal domain-like |
6 |
2 |
no |
no |
PF15112 |
W5NIA4 |
6-306 |
nD1 |
6-45,71-210 |
180 |
e3brjA1 |
3BRJ |
3931.1.1 |
0.937 |
0.471 |
0.447 |
4.7|5.5|0 |
0.606 |
1.071 |
pymol |
more |
good_domain |
alpha bundles |
MtlR-like |
MtlR-like |
MtlR-like |
7 |
2 |
no |
no |
PF15125 |
W5LRS4 |
8-76 |
nD1 |
11-70 |
60 |
e2rmkB1 |
2RMK |
192.5.1 |
0.943 |
0.0 |
0.0 |
7.8|7.8|1 |
0.761 |
0.656 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
HR1 repeat |
HR1 repeat |
2 |
1 |
no |
yes:2 |
PF15135 |
A0A0D2VX46 |
113-373 |
nD1 |
216-255 |
40 |
e2kwqA1 |
2KWQ |
375.1.1 |
0.946 |
0.826 |
0.906 |
0.0|0.0|0 |
0.821 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
yes:out |
no |
PF15135 |
Q9NUL5 |
16-272 |
nD3 |
141-185 |
45 |
e5fmfR2 |
5FMF |
375.1.1 |
0.861 |
0.822 |
0.914 |
0.0|0.0|1 |
0.524 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
no |
PF15148 |
G3TZH4 |
12-210 |
nD1 |
11-80,136-180 |
115 |
e3l39A1 |
3L39 |
604.5.1 |
0.874 |
0.0 |
0.0 |
4.6|5.2|0 |
0.418 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
5 |
0 |
no |
no |
PF15156 |
W5JZR3 |
28-307 |
nD1 |
41-135,156-300 |
240 |
e6klsE1 |
6KLS |
5069.1.1 |
0.896 |
0.0 |
0.092 |
5.5|5.5|1 |
0.733 |
1.132 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
8 |
2 |
yes:out |
yes:5 |
PF15159 |
A0A0C3CBC7 |
6-74 |
nD1 |
6-75 |
70 |
e1am9C1 |
1AM9 |
105.1.1 |
0.933 |
0.0 |
0.0 |
2.8|2.8|1 |
0.802 |
1.045 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
3 |
0 |
no |
yes:2 |
PF15186 |
Q99MW5 |
4-151 |
nD1 |
6-80 |
75 |
e7emfG1 |
7EMF |
4207.1.2 |
0.876 |
0.0 |
0.0 |
4.9|4.9|1 |
0.432 |
0.708 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Mediator hinge subcomplex-like |
Mediator hinge subcomplex-like |
MED7 hinge region |
4 |
0 |
no |
no |
PF15189 |
A0A0M3JAU8 |
1-154 |
nD1 |
1-154 |
154 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.887 |
0.0 |
0.0 |
12.2|12.2|1 |
0.676 |
2.61 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
4 |
0 |
no |
no |
PF15189 |
A0A183E772 |
13-173 |
nD1 |
16-125,146-200 |
165 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.905 |
0.0 |
0.0 |
11.7|11.7|1 |
0.639 |
2.797 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
5 |
0 |
no |
no |
PF15190 |
G7MZ16 |
40-167 |
nD1 |
41-80,106-130,136-165 |
95 |
e7dluA2 |
7DLU |
5058.1.1 |
0.947 |
0.0 |
0.0 |
6.2|6.6|0 |
0.833 |
0.984 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
3 |
0 |
no |
yes:2 |
PF15244 |
A0A2K5WGE1 |
9-422 |
nD1 |
71-100,361-420 |
90 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.907 |
0.0 |
0.0 |
3.8|3.8|1 |
0.529 |
1.233 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
4 |
0 |
no |
no |
PF15249 |
A0A453BVJ0 |
59-161 |
nD2 |
91-195 |
105 |
e6h9bE1 |
6H9B |
586.1.1 |
0.935 |
0.0 |
0.0 |
6.0|6.0|1 |
0.682 |
1.014 |
pymol |
more |
good_domain |
extended segments |
Stathmin |
Stathmin |
Stathmin |
2 |
2 |
no |
no |
PF15256 |
H2Z4Q0 |
86-293 |
nD1 |
181-195,251-300 |
65 |
e5u4kA1 |
5U4K |
103.4.1 |
0.92 |
0.0 |
0.0 |
2.7|2.7|1 |
0.67 |
0.67 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
no |
PF15256 |
G3W9P4 |
27-214 |
nD1 |
166-215 |
50 |
e2bskA1 |
2BSK |
4120.1.1 |
0.883 |
0.0 |
0.0 |
3.5|3.5|0 |
0.553 |
0.68 |
pymol |
more |
good_domain |
few secondary structure elements |
Tim10/DDP |
Tim10/DDP |
Tim10/DDP |
3 |
0 |
no |
no |
PF15279 |
E9GN80 |
141-450 |
nD2 |
136-185 |
50 |
e4v9fU1 |
4V9F |
377.1.1 |
0.942 |
0.316 |
0.482 |
3.8|4.1|1 |
0.799 |
1.0 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
yes:out |
PF15279 |
K1PCW3 |
167-508 |
nD2 |
166-210 |
45 |
e4v9fU1 |
4V9F |
377.1.1 |
0.949 |
0.303 |
0.557 |
4.0|4.5|1 |
0.758 |
0.9 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
no |
PF15322 |
G1Q2Q5 |
24-328 |
nD1 |
201-245 |
45 |
e7nydC2 |
7NYD |
922.1.1 |
0.863 |
0.758 |
0.0 |
0.0|0.0|1 |
0.696 |
0.776 |
pymol |
more |
good_domain |
few secondary structure elements |
TSP-1 type 1 repeat |
TSP-1 type 1 repeat |
TSP-1 type 1 repeat |
1 |
5 |
yes:out |
no |
PF15328 |
B4KD66 |
34-240 |
nD1 |
21-100,266-290 |
105 |
e4u3uO51 |
4U3U |
192.4.1 |
0.929 |
0.0 |
0.203 |
6.4|6.4|1 |
0.761 |
0.882 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Ribosomal protein L29 (L29p) |
Ribosomal protein L29 (L29p) |
4 |
0 |
no |
no |
PF15372 |
M3Z5K4 |
54-181 |
nD1 |
11-180 |
170 |
e7kzoY11 |
7KZO |
3755.3.1 |
0.918 |
0.553 |
0.829 |
5.6|5.9|0 |
0.38 |
0.988 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
4 |
0 |
no |
no |
PF15383 |
W5MW63 |
135-376 |
nD1 |
206-370 |
165 |
e6egcA1 |
6EGC |
192.29.1 |
0.948 |
0.0 |
0.0 |
13.1|13.1|1 |
0.946 |
2.171 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF15383 |
G3PQC4 |
138-383 |
nD1 |
216-380 |
165 |
e6egcA1 |
6EGC |
192.29.1 |
0.945 |
0.0 |
0.0 |
11.9|11.9|1 |
0.938 |
2.171 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF15390 |
W5LD85 |
2-691 |
nD1 |
1-230,316-453 |
368 |
e6urgA1 |
6URG |
5.1.4 |
0.88 |
0.0 |
0.995 |
21.9|27.0|1 |
0.936 |
1.025 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
28 |
no |
no |
PF15394 |
H9G5Q1 |
2-491 |
nD2 |
261-345 |
85 |
e6zvhR1 |
6ZVH |
101.1.17 |
0.945 |
0.0 |
0.0 |
5.4|6.4|0 |
0.848 |
1.181 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
FF domain |
4 |
0 |
yes:out |
no |
PF15396 |
H3BD29 |
2-193 |
nD1 |
13-75 |
63 |
e7po9A1 |
7PO9 |
377.1.1 |
0.893 |
0.196 |
0.18 |
3.9|4.1|1 |
0.708 |
1.26 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
2 |
2 |
no |
no |
PF15396 |
B4L6C4 |
2-273 |
nD1 |
16-65 |
50 |
e7po9A1 |
7PO9 |
377.1.1 |
0.925 |
0.078 |
0.079 |
3.1|3.5|1 |
0.6 |
1.0 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
2 |
2 |
no |
no |
PF15420 |
Q8NLM9 |
72-274 |
nD2 |
56-180,506-545 |
165 |
e4d3sD2 |
4D3S |
129.1.1 |
0.901 |
0.0 |
0.0 |
4.7|4.7|1 |
0.666 |
1.289 |
pymol |
more |
good_domain |
alpha arrays |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
5 |
0 |
no |
yes:3 |
PF15436 |
A0A7M1LIQ4 |
5-217 |
nD2 |
96-175,206-220 |
95 |
e2miiA1 |
2MII |
7503.1.1 |
0.918 |
0.0 |
0.0 |
5.9|6.6|1 |
0.667 |
0.629 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
4 |
5 |
no |
no |
PF15436 |
I0ENA5 |
25-237 |
nD2 |
111-198,226-240 |
103 |
e2miiA1 |
2MII |
7503.1.1 |
0.909 |
0.0 |
0.383 |
5.3|5.3|1 |
0.752 |
0.682 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
3 |
5 |
yes:out |
no |
PF15436 |
A0A1W1BJ59 |
3-215 |
nD2 |
91-174 |
84 |
e2miiA1 |
2MII |
7503.1.1 |
0.917 |
0.0 |
0.0 |
5.3|6.1|1 |
0.712 |
0.556 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
3 |
5 |
no |
yes:1 |
PF15438 |
Q1MWC9 |
1-195 |
nD1 |
36-115 |
80 |
e4v61BJ1 |
4V61 |
523.1.1 |
0.859 |
0.0 |
0.0 |
3.4|4.1|1 |
0.731 |
0.847 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein L9 C-domain |
Ribosomal protein L9 C-domain |
Ribosomal protein L9 C-domain |
1 |
3 |
yes:out |
yes:out |
PF15450 |
H0WIL2 |
55-589 |
nD1 |
71-125,151-295,321-385 |
265 |
e4iloB5 |
4ILO |
3755.3.1 |
0.926 |
0.897 |
0.89 |
5.0|5.9|0 |
0.691 |
1.541 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF15456 |
A0A367JUP9 |
17-128 |
nD2 |
36-155 |
120 |
e4iloB5 |
4ILO |
3755.3.1 |
0.924 |
0.0 |
0.0 |
12.1|12.1|1 |
0.494 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
no |
PF15457 |
Q8RP17 |
1-316 |
nD1 |
31-275 |
245 |
e4cv5D1 |
4CV5 |
109.4.1 |
0.919 |
0.0 |
0.0 |
7.1|7.5|1 |
0.462 |
0.857 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
1 |
no |
no |
PF15461 |
A0A1W2H7T5 |
38-283 |
nD1 |
6-290 |
285 |
e4tq4D1 |
4TQ4 |
141.1.1 |
0.876 |
0.0 |
0.0 |
5.9|5.9|1 |
0.548 |
0.911 |
pymol |
more |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
10 |
0 |
no |
yes:8 |
PF15461 |
A0A6I7MN46 |
37-282 |
nD1 |
6-285 |
280 |
e4od4F1 |
4OD4 |
141.1.1 |
0.877 |
0.0 |
0.0 |
5.7|5.7|1 |
0.545 |
0.895 |
pymol |
more |
good_domain |
alpha bundles |
Terpenoid synthases |
Terpenoid synthases |
Terpenoid synthases |
10 |
0 |
no |
yes:8 |
PF15467 |
H2LCU0 |
23-487 |
nD1 |
141-215 |
75 |
e1zk8A1 |
1ZK8 |
101.1.1 |
0.854 |
0.0 |
0.36 |
4.5|5.0|0 |
0.875 |
1.027 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
yes:out |
no |
PF15467 |
H2LCU0 |
23-487 |
nD2 |
296-370 |
75 |
e2p22A1 |
2P22 |
192.15.1 |
0.907 |
0.0 |
0.0 |
5.4|5.8|0 |
0.516 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
3 |
0 |
yes:out |
no |
PF15467 |
H3ACP3 |
20-476 |
nD2 |
276-350 |
75 |
e1nh2D2 |
1NH2 |
104.1.1 |
0.861 |
0.0 |
0.436 |
5.2|5.5|1 |
0.937 |
1.327 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TFIIA, alpha-helical domain |
TFIIA, alpha-helical domain |
TFIIA, alpha-helical domain |
3 |
0 |
yes:out |
no |
PF15481 |
A0A0R3PDW3 |
10-102 |
nD1 |
1-210 |
210 |
e3l39A1 |
3L39 |
604.5.1 |
0.921 |
0.0 |
0.0 |
4.3|4.6|0 |
0.596 |
1.944 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
10 |
0 |
no |
no |
PF15481 |
W6NFT5 |
29-122 |
nD1 |
18-230 |
213 |
e2oltC1 |
2OLT |
604.5.1 |
0.904 |
0.0 |
0.0 |
3.2|3.7|0 |
0.589 |
1.972 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
11 |
0 |
no |
no |
PF15520 |
A0A1S9D100 |
114-304 |
nD3 |
201-305 |
105 |
e1wfxA2 |
1WFX |
237.1.1 |
0.862 |
0.0 |
0.0 |
5.4|5.6|1 |
0.717 |
0.515 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
2 |
5 |
yes:out |
no |
PF15520 |
S5C4Z5 |
37-225 |
nD2 |
56-95 |
40 |
e4b6xB1 |
4B6X |
192.1.1 |
0.942 |
0.0 |
0.0 |
5.2|6.2|0 |
0.822 |
0.556 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
2 |
1 |
no |
no |
PF15520 |
S5C4Z5 |
37-225 |
nD3 |
116-225 |
110 |
e6b12D1 |
6B12 |
237.1.1 |
0.861 |
0.0 |
0.0 |
5.3|6.9|1 |
0.672 |
0.539 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
3 |
5 |
no |
no |
PF15523 |
A0A2D0HG48 |
235-323 |
nD2 |
236-335 |
100 |
e6qv5A1 |
6QV5 |
601.33.1 |
0.916 |
0.0 |
0.0 |
6.8|6.8|1 |
0.861 |
0.735 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
3 |
0 |
no |
yes:out |
PF15523 |
G2Z5J2 |
162-245 |
nD2 |
166-250 |
85 |
e6qv5A1 |
6QV5 |
601.33.1 |
0.943 |
0.0 |
0.0 |
8.1|8.1|1 |
0.848 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
3 |
0 |
no |
yes:out |
PF15523 |
A9FD43 |
308-393 |
nD2 |
316-395 |
80 |
e6qv5A1 |
6QV5 |
601.33.1 |
0.933 |
0.0 |
0.0 |
6.8|6.8|1 |
0.825 |
0.588 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
CHAD domain |
CHAD domain |
3 |
0 |
no |
yes:out |
PF15527 |
A0A3N6MRM5 |
963-1091 |
nD6 |
966-1085 |
120 |
e5aeoB1 |
5AEO |
3863.1.1 |
0.925 |
0.0 |
0.0 |
8.8|9.3|1 |
0.952 |
1.062 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
1 |
8 |
no |
no |
PF15527 |
A0A848I3F9 |
14-142 |
nD1 |
16-135 |
120 |
e5aeoB1 |
5AEO |
3863.1.1 |
0.939 |
0.0 |
0.0 |
10.0|10.6|1 |
0.938 |
1.062 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
2 |
8 |
no |
no |
PF15527 |
A0A4R8K4K6 |
1144-1265 |
nD6 |
1141-1265 |
125 |
e4cv7A1 |
4CV7 |
3863.1.1 |
0.936 |
0.0 |
0.0 |
10.3|11.0|1 |
0.957 |
1.106 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
1 |
8 |
no |
no |
PF15530 |
A0A084ZHI8 |
135-299 |
nD3 |
176-295 |
120 |
e4cv7A1 |
4CV7 |
3863.1.1 |
0.867 |
0.0 |
0.0 |
7.5|8.7|1 |
0.842 |
1.062 |
pymol |
more |
good_domain |
beta barrels |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
Virulence associated protein B (Vapb) |
0 |
5 |
no |
no |
PF15533 |
H8KRI4 |
804-868 |
nD2 |
811-870 |
60 |
e2frxA3 |
2FRX |
243.6.1 |
0.881 |
0.0 |
0.0 |
2.2|2.2|1 |
0.618 |
0.667 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Pre-PUA domain |
Pre-PUA domain |
1 |
3 |
no |
no |
PF15534 |
A0A3Q9P2Q3 |
30-102 |
nD1 |
6-105 |
100 |
e1v74A1 |
1V74 |
234.3.1 |
0.933 |
0.0 |
0.0 |
5.1|5.1|1 |
0.747 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Microbial ribonucleases-like |
Colicin D nuclease domain |
Colicin D nuclease domain |
4 |
4 |
no |
no |
PF15537 |
A0A5C7QSG4 |
1019-1133 |
nD3 |
1041-1150 |
110 |
e2hw4A1 |
2HW4 |
4114.1.1 |
0.924 |
0.0 |
0.0 |
6.7|6.7|1 |
0.661 |
0.598 |
pymol |
more |
good_domain |
a+b two layers |
PHP14-like |
PHP14-like |
PHP14-like |
2 |
6 |
yes:out |
no |
PF15540 |
Q8ZRK9 |
122-236 |
nD2 |
141-229 |
89 |
e6l3wA2 |
6L3W |
211.1.1 |
0.908 |
0.0 |
0.0 |
2.9|3.2|0 |
0.775 |
1.309 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
3 |
5 |
no |
no |
PF15540 |
A0A1B5DPA8 |
671-786 |
nD3 |
671-780 |
110 |
e3omsA2 |
3OMS |
211.1.1 |
0.912 |
0.0 |
0.0 |
2.8|3.7|0 |
0.881 |
1.618 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
5 |
no |
no |
PF15542 |
C3ANC8 |
2-94 |
nD1 |
1-95 |
95 |
e5e3eB1 |
5E3E |
372.1.1 |
0.851 |
0.0 |
0.0 |
6.1|6.1|1 |
0.693 |
0.779 |
pymol |
more |
good_domain |
a+b complex topology |
RNase A-like |
RNase A-like |
RNase A-like |
2 |
4 |
no |
no |
PF15542 |
A0A2C2TCF4 |
2-94 |
nD1 |
1-95 |
95 |
e5e3eB1 |
5E3E |
372.1.1 |
0.851 |
0.0 |
0.0 |
6.1|6.1|1 |
0.693 |
0.779 |
pymol |
more |
good_domain |
a+b complex topology |
RNase A-like |
RNase A-like |
RNase A-like |
2 |
4 |
no |
no |
PF15542 |
A0A2S9HMA6 |
2-93 |
nD1 |
1-95 |
95 |
e5e3eB1 |
5E3E |
372.1.1 |
0.851 |
0.0 |
0.0 |
6.0|6.0|1 |
0.684 |
0.779 |
pymol |
more |
good_domain |
a+b complex topology |
RNase A-like |
RNase A-like |
RNase A-like |
2 |
4 |
no |
no |
PF15545 |
A0Q1W6 |
21-90 |
nD1 |
16-90 |
75 |
e6skaA3 |
6SKA |
378.1.2 |
0.864 |
0.0 |
0.0 |
2.1|2.3|0 |
0.535 |
0.872 |
pymol |
more |
good_domain |
few secondary structure elements |
His-Me finger endonucleases |
His-Me finger endonucleases |
Inactive Tox-GHH domain of teneurin |
3 |
2 |
no |
no |
PF15545 |
A0A317EGZ7 |
56-125 |
nD1 |
46-124 |
79 |
e6skaA3 |
6SKA |
378.1.2 |
0.854 |
0.0 |
0.0 |
3.7|3.7|1 |
0.651 |
0.919 |
pymol |
more |
good_domain |
few secondary structure elements |
His-Me finger endonucleases |
His-Me finger endonucleases |
Inactive Tox-GHH domain of teneurin |
3 |
2 |
no |
no |
PF15545 |
A0A4Z0FMQ0 |
52-120 |
nD1 |
41-119 |
79 |
e6skaA3 |
6SKA |
378.1.2 |
0.854 |
0.0 |
0.0 |
3.8|3.8|1 |
0.651 |
0.919 |
pymol |
more |
good_domain |
few secondary structure elements |
His-Me finger endonucleases |
His-Me finger endonucleases |
Inactive Tox-GHH domain of teneurin |
3 |
2 |
no |
no |
PF15560 |
Q73QB3 |
1-138 |
nD1 |
1-145 |
145 |
e1xm5B1 |
1XM5 |
2498.1.1 |
0.935 |
0.0 |
0.0 |
6.9|7.7|1 |
0.833 |
0.578 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
3 |
no |
no |
PF15560 |
A0A379E9E1 |
1-137 |
nD1 |
1-145 |
145 |
e1oz9A1 |
1OZ9 |
2498.1.1 |
0.89 |
0.0 |
0.0 |
7.5|7.5|1 |
0.837 |
0.578 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
3 |
no |
no |
PF15560 |
D7JGN5 |
1-138 |
nD1 |
1-145 |
145 |
e1xm5B1 |
1XM5 |
2498.1.1 |
0.943 |
0.0 |
0.0 |
7.0|8.0|1 |
0.846 |
0.578 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
3 |
no |
no |
PF15565 |
A0A556C336 |
12-113 |
nD1 |
6-150 |
145 |
e5h78B1 |
5H78 |
109.3.1 |
0.942 |
0.366 |
0.0 |
7.6|8.1|0 |
0.752 |
0.729 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
0 |
no |
no |
PF15565 |
A0A844LSK5 |
12-112 |
nD1 |
1-150 |
150 |
e1te4A1 |
1TE4 |
109.4.1 |
0.852 |
0.525 |
0.922 |
4.3|9.1|1 |
0.8 |
0.524 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF15567 |
D9T0D3 |
4-86 |
nD1 |
1-100 |
100 |
e5boiA3 |
5BOI |
243.3.1 |
0.948 |
0.718 |
0.959 |
5.9|5.9|1 |
0.92 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
4 |
no |
no |
PF15568 |
Q2C532 |
1-128 |
nD1 |
6-125 |
120 |
e1xm5B1 |
1XM5 |
2498.1.1 |
0.851 |
0.0 |
0.0 |
6.7|6.7|1 |
0.725 |
0.478 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
4 |
no |
no |
PF15568 |
Q1RGN6 |
1-129 |
nD1 |
6-145 |
140 |
e1oz9A1 |
1OZ9 |
2498.1.1 |
0.865 |
0.0 |
0.0 |
6.0|6.0|1 |
0.815 |
0.558 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
4 |
no |
no |
PF15568 |
A0A5C5WAV5 |
3-130 |
nD1 |
6-134 |
129 |
e1oz9A1 |
1OZ9 |
2498.1.1 |
0.926 |
0.0 |
0.0 |
6.3|6.9|1 |
0.83 |
0.514 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
3 |
no |
no |
PF15571 |
A0A0H3B1S3 |
1-116 |
nD1 |
1-128 |
128 |
e1oz9A1 |
1OZ9 |
2498.1.1 |
0.916 |
0.0 |
0.0 |
7.5|7.5|1 |
0.824 |
0.51 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
4 |
4 |
no |
no |
PF15571 |
A0A3G5KAP0 |
1-116 |
nD1 |
1-128 |
128 |
e1oz9A1 |
1OZ9 |
2498.1.1 |
0.915 |
0.0 |
0.0 |
7.4|7.4|1 |
0.824 |
0.51 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
5 |
3 |
no |
no |
PF15572 |
Q6D5C1 |
7-100 |
nD1 |
6-105 |
100 |
e6u425P3 |
6U42 |
220.1.1 |
0.87 |
0.0 |
0.0 |
2.5|2.5|1 |
0.663 |
0.82 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
no |
PF15572 |
A0A5U9VTJ4 |
3-95 |
nD1 |
1-100 |
100 |
e7rro63 |
7RRO |
220.1.1 |
0.865 |
0.0 |
0.0 |
2.8|3.0|1 |
0.709 |
0.82 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
no |
PF15572 |
A0A831ERA4 |
7-96 |
nD1 |
1-100 |
100 |
e1ib8A1 |
1IB8 |
4.1.1 |
0.91 |
0.0 |
0.435 |
3.2|3.2|1 |
0.783 |
1.25 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
6 |
no |
no |
PF15575 |
A0A0Q0GK30 |
62-276 |
nD1 |
6-280 |
275 |
e4i9eA1 |
4I9E |
109.4.1 |
0.923 |
0.0 |
0.148 |
6.1|7.0|1 |
0.576 |
0.962 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
2 |
no |
no |
PF15575 |
A0A3D4C7Q3 |
60-270 |
nD1 |
6-275 |
270 |
e6hc2G1 |
6HC2 |
109.4.1 |
0.932 |
0.0 |
0.247 |
7.0|8.8|1 |
0.59 |
0.944 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
2 |
no |
no |
PF15578 |
F7BTZ9 |
2-266 |
nD1 |
206-260 |
55 |
e6lo8H1 |
6LO8 |
4120.1.1 |
0.937 |
0.0 |
0.0 |
3.7|3.7|1 |
0.672 |
0.748 |
pymol |
more |
good_domain |
few secondary structure elements |
Tim10/DDP |
Tim10/DDP |
Tim10/DDP |
2 |
1 |
no |
no |
PF15585 |
A0A3B0CIE7 |
1-125 |
nD1 |
1-125 |
125 |
e2nzcA1 |
2NZC |
304.8.1 |
0.912 |
0.0 |
0.0 |
6.1|6.8|0 |
0.948 |
1.488 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
6 |
no |
no |
PF15585 |
A0A2R5EUR5 |
1-125 |
nD1 |
1-125 |
125 |
e2nzcA1 |
2NZC |
304.8.1 |
0.912 |
0.0 |
0.0 |
6.1|6.7|0 |
0.948 |
1.488 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
6 |
no |
no |
PF15585 |
A0A1H4HIG7 |
1-130 |
nD1 |
1-125 |
125 |
e5jk5B2 |
5JK5 |
304.8.1 |
0.87 |
0.0 |
0.0 |
6.0|6.3|0 |
0.891 |
1.488 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
6 |
no |
no |
PF15594 |
Q7N9K1 |
9-123 |
nD1 |
1-120 |
120 |
e5v77A1 |
5V77 |
3504.4.1 |
0.891 |
0.669 |
0.959 |
9.4|9.4|1 |
0.79 |
1.143 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
An uncharacterized protein |
An uncharacterized protein |
1 |
7 |
no |
no |
PF15594 |
E0SGM1 |
15-130 |
nD1 |
22-130 |
109 |
e5v77A1 |
5V77 |
3504.4.1 |
0.94 |
0.823 |
0.968 |
9.6|9.6|1 |
0.79 |
1.038 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
An uncharacterized protein |
An uncharacterized protein |
0 |
7 |
no |
no |
PF15594 |
Q12D71 |
33-161 |
nD1 |
31-75,96-160 |
110 |
e5v77A1 |
5V77 |
3504.4.1 |
0.937 |
0.888 |
0.971 |
6.4|6.4|1 |
0.743 |
1.048 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
An uncharacterized protein |
An uncharacterized protein |
1 |
8 |
no |
no |
PF15596 |
A0A6N9SCM1 |
1-99 |
nD1 |
1-140 |
140 |
e7e2sA2 |
7E2S |
109.4.1 |
0.89 |
0.0 |
0.0 |
4.9|6.3|1 |
0.868 |
0.49 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
1 |
no |
no |
PF15600 |
B8I7J1 |
1-195 |
nD1 |
1-195 |
195 |
e6d7yB1 |
6D7Y |
7075.1.1 |
0.934 |
0.955 |
0.961 |
10.5|10.5|1 |
0.907 |
1.258 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
5 |
9 |
no |
no |
PF15600 |
A0A101Y1W9 |
2-189 |
nD1 |
1-185 |
185 |
e6d7yB1 |
6D7Y |
7075.1.1 |
0.931 |
0.946 |
0.949 |
10.9|10.9|1 |
0.94 |
1.194 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
4 |
9 |
no |
no |
PF15600 |
A0A1B3XNH5 |
10-189 |
nD1 |
1-185 |
185 |
e6d7yB1 |
6D7Y |
7075.1.1 |
0.917 |
0.917 |
0.947 |
10.0|10.0|1 |
0.887 |
1.194 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
uncharacterized protein SAMEA2273162_06031 |
4 |
9 |
no |
no |
PF15603 |
C5AE87 |
5-84 |
nD1 |
1-84 |
84 |
e1xmtA1 |
1XMT |
213.1.1 |
0.875 |
0.0 |
0.462 |
4.8|4.9|1 |
0.716 |
0.511 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
2 |
7 |
no |
no |
PF15603 |
A0A379LTI4 |
2-74 |
nD1 |
1-75 |
75 |
e3prbB1 |
3PRB |
327.7.1 |
0.879 |
0.0 |
0.0 |
3.2|3.2|1 |
0.693 |
0.893 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
2 |
5 |
no |
no |
PF15606 |
A0A6V7D0K8 |
935-1002 |
nD3 |
946-995 |
50 |
e2rasA3 |
2RAS |
101.1.1 |
0.896 |
0.0 |
0.0 |
2.2|2.4|0 |
0.686 |
0.685 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF15608 |
A0A7C6RZL2 |
282-357 |
nD2 |
236-255,281-360 |
100 |
e3on1A1 |
3ON1 |
301.1.1 |
0.933 |
0.783 |
0.85 |
7.4|8.0|1 |
0.828 |
0.826 |
pymol |
more |
good_domain |
a+b three layers |
Bacillus chorismate mutase-like |
L30e-like |
L30e-like |
5 |
5 |
no |
no |
PF15608 |
A0A7U7J642 |
283-358 |
nD2 |
276-360 |
85 |
e3o85B1 |
3O85 |
301.1.1 |
0.942 |
0.794 |
0.841 |
7.3|8.3|1 |
0.715 |
0.702 |
pymol |
more |
good_domain |
a+b three layers |
Bacillus chorismate mutase-like |
L30e-like |
L30e-like |
3 |
4 |
no |
no |
PF15611 |
I0HQ53 |
35-463 |
nD4 |
191-325 |
135 |
e6px0A1 |
6PX0 |
109.4.1 |
0.913 |
0.0 |
0.194 |
4.6|5.4|1 |
0.731 |
0.472 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF15625 |
A1ZAV1 |
421-574 |
nD3 |
201-235,441-560,686-710,771-965 |
375 |
e6b6lB5 |
6B6L |
11.1.1 |
0.87 |
0.0 |
0.0 |
5.4|13.9|0 |
0.78 |
3.472 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
17 |
no |
no |
PF15633 |
A0A2S4ZEU8 |
1-101 |
nD1 |
1-105 |
105 |
e7kw8A1 |
7KW8 |
237.1.1 |
0.852 |
0.0 |
0.517 |
4.4|8.9|1 |
0.747 |
0.515 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
3 |
6 |
no |
no |
PF15638 |
F0FB94 |
10-215 |
nD1 |
11-225 |
215 |
e6aitA1 |
6AIT |
2498.1.1 |
0.918 |
0.521 |
0.37 |
4.9|6.4|1 |
0.455 |
0.857 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
7 |
11 |
no |
no |
PF15643 |
A0A2W7ARP2 |
5-103 |
nD1 |
1-120 |
120 |
e6jzeA1 |
6JZE |
219.1.1 |
0.884 |
0.0 |
0.761 |
5.8|8.1|1 |
0.66 |
0.536 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
7 |
no |
no |
PF15644 |
C6WKK9 |
96-198 |
nD2 |
91-220 |
130 |
e6mpzA1 |
6MPZ |
219.1.1 |
0.884 |
0.0 |
0.866 |
6.5|9.3|1 |
0.791 |
0.58 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
3 |
5 |
no |
no |
PF15646 |
A0A101NKV3 |
12-133 |
nD1 |
11-140 |
130 |
e1y88A2 |
1Y88 |
2008.1.1 |
0.938 |
0.0 |
0.0 |
6.3|6.3|1 |
0.801 |
0.637 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
4 |
5 |
no |
no |
PF15646 |
A0A1S6LPY4 |
27-146 |
nD1 |
6-154 |
149 |
e1y88A2 |
1Y88 |
2008.1.1 |
0.928 |
0.0 |
0.0 |
6.7|6.7|1 |
0.818 |
0.73 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
5 |
no |
no |
PF15646 |
A0A2U8UZ96 |
27-146 |
nD1 |
6-154 |
149 |
e1y88A2 |
1Y88 |
2008.1.1 |
0.919 |
0.0 |
0.0 |
6.6|6.6|1 |
0.818 |
0.73 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
4 |
6 |
no |
no |
PF15649 |
K0ER61 |
332-414 |
nD2 |
321-433 |
113 |
e4dapA2 |
4DAP |
2008.1.1 |
0.939 |
0.0 |
0.0 |
6.5|7.4|1 |
0.779 |
0.554 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
5 |
no |
no |
PF15649 |
A0A0E3XRJ5 |
338-424 |
nD2 |
321-445 |
125 |
e4dapA2 |
4DAP |
2008.1.1 |
0.94 |
0.0 |
0.333 |
6.5|6.5|1 |
0.786 |
0.613 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
7 |
no |
no |
PF15659 |
Q8A3M7 |
941-1029 |
nD3 |
871-1074 |
204 |
e1oi0D1 |
1OI0 |
2492.1.1 |
0.937 |
0.0 |
0.0 |
6.6|8.8|1 |
0.884 |
1.259 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
5 |
10 |
yes:out |
no |
PF15659 |
A0A1M5BHX5 |
929-1016 |
nD3 |
861-1064 |
204 |
e1oi0D1 |
1OI0 |
2492.1.1 |
0.94 |
0.0 |
0.0 |
6.4|8.6|1 |
0.9 |
1.259 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
4 |
11 |
yes:out |
no |
PF15673 |
H0WQS8 |
89-366 |
nD1 |
111-190 |
80 |
e4uy3A2 |
4UY3 |
632.22.1 |
0.893 |
0.0 |
0.0 |
2.0|2.0|1 |
0.88 |
0.769 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
no |
PF15678 |
H0ZT11 |
67-465 |
nD1 |
36-65,91-135,226-245 |
95 |
e6mi3B1 |
6MI3 |
3922.1.1 |
0.916 |
0.0 |
0.0 |
5.9|5.9|1 |
0.621 |
0.736 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
3 |
0 |
no |
no |
PF15704 |
A0A6I9QDL8 |
1-174 |
nD1 |
51-140 |
90 |
e7o5bg2 |
7O5B |
181.1.1 |
0.937 |
0.0 |
0.0 |
5.2|5.2|1 |
0.881 |
1.023 |
pymol |
more |
good_domain |
alpha bundles |
Domain of the SRP/SRP receptor G proteins-like |
Domain of the SRP/SRP receptor G-proteins |
Domain of the SRP/SRP receptor G-proteins |
4 |
1 |
no |
no |
PF15705 |
F1NGV0 |
49-177 |
nD2 |
46-110,676-695 |
85 |
e7lfbH1 |
7LFB |
11.1.1 |
0.911 |
0.0 |
0.0 |
3.0|3.0|1 |
0.484 |
0.787 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:out |
yes:out |
PF15705 |
Q922P8 |
44-163 |
nD2 |
41-105,641-660 |
85 |
e2k7pA1 |
2K7P |
11.1.1 |
0.894 |
0.0 |
0.0 |
3.0|3.0|1 |
0.578 |
0.787 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:out |
yes:out |
PF15717 |
Q8AV28 |
1278-1875 |
nD9 |
1486-1600 |
115 |
e7o5bg2 |
7O5B |
181.1.1 |
0.912 |
0.0 |
0.0 |
6.8|7.3|0 |
0.959 |
1.307 |
pymol |
more |
good_domain |
alpha bundles |
Domain of the SRP/SRP receptor G proteins-like |
Domain of the SRP/SRP receptor G-proteins |
Domain of the SRP/SRP receptor G-proteins |
4 |
1 |
no |
no |
PF15718 |
H0UZK3 |
2-958 |
nD1 |
201-375 |
175 |
e5ynxB1 |
5YNX |
622.4.1 |
0.875 |
0.0 |
0.0 |
10.5|10.9|0 |
0.915 |
1.643 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
Mite allergen Der p 5-related |
Mite allergen Der p 5-related |
5 |
0 |
no |
no |
PF15718 |
G3TAT2 |
1-944 |
nD2 |
201-365 |
165 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.916 |
0.0 |
0.0 |
8.4|8.4|0 |
0.559 |
2.797 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
5 |
0 |
no |
no |
PF15718 |
A0A481D2R0 |
2-956 |
nD1 |
196-370 |
175 |
e6e9vB1 |
6E9V |
109.3.1 |
0.862 |
0.0 |
0.0 |
10.1|10.1|1 |
0.502 |
0.879 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
0 |
no |
no |
PF15739 |
W5NIE4 |
213-323 |
nD2 |
201-270 |
70 |
e3udcG6 |
3UDC |
5058.1.1 |
0.882 |
0.0 |
0.0 |
6.2|6.2|1 |
0.739 |
0.725 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
3 |
0 |
no |
no |
PF15746 |
A7MB05 |
1-235 |
nD1 |
6-30,41-65 |
50 |
e4qpjB2 |
4QPJ |
605.1.1 |
0.902 |
0.0 |
0.0 |
4.0|4.0|1 |
0.751 |
0.685 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
2 |
1 |
no |
yes:2 |
PF15754 |
A0JPP4 |
20-381 |
nD1 |
261-285,291-320,336-360 |
80 |
e3gn4A1 |
3GN4 |
3860.1.1 |
0.94 |
0.0 |
0.0 |
4.5|4.5|1 |
0.744 |
1.096 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
3 |
0 |
yes:out |
no |
PF15795 |
K1Q764 |
63-146 |
nD1 |
71-100,131-155 |
55 |
e2r9iA1 |
2R9I |
5055.1.1 |
0.93 |
0.0 |
0.0 |
5.1|5.1|1 |
0.605 |
0.688 |
pymol |
more |
good_domain |
extended segments |
Small-conductance potassium channel |
Small-conductance potassium channel |
Small-conductance potassium channel |
3 |
0 |
no |
yes:2 |
PF15799 |
Q9JJF6 |
7-558 |
nD5 |
471-540 |
70 |
e6zx9C2 |
6ZX9 |
3788.1.1 |
0.92 |
0.0 |
0.0 |
6.0|6.0|1 |
0.783 |
0.787 |
pymol |
na |
good_domain |
alpha bundles |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
Viral accessory protein x (Vpx) / viral protein r (Vpr) |
3 |
0 |
no |
no |
PF15802 |
H9GNF1 |
47-521 |
nD1 |
66-305 |
240 |
e7ne7A1 |
7NE7 |
5.1.4 |
0.88 |
0.0 |
0.953 |
11.3|11.7|1 |
0.598 |
0.669 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
19 |
no |
yes:1 |
PF15813 |
A0A6P4U1P3 |
7-271 |
nD1 |
6-125,141-160 |
140 |
e7eqxA1 |
7EQX |
304.7.1 |
0.921 |
0.0 |
0.0 |
7.0|7.0|1 |
0.977 |
1.505 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Protease propeptides/inhibitors |
Protease propeptides/inhibitors |
5 |
7 |
no |
no |
PF15818 |
G3T452 |
26-1066 |
nD1 |
101-145,151-230,236-305 |
195 |
e7moqZ1 |
7MOQ |
3755.3.1 |
0.921 |
0.975 |
0.983 |
0.0|0.0|0 |
0.869 |
1.134 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
1 |
0 |
no |
no |
PF15866 |
B4R3B6 |
2-195 |
nD1 |
6-200 |
195 |
e4ca1B1 |
4CA1 |
11.10.1 |
0.944 |
0.498 |
0.703 |
12.4|12.4|1 |
0.946 |
1.266 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
TRAF domain-like |
TRAF domain-like |
6 |
9 |
no |
no |
PF15868 |
A0A158NCT8 |
30-110 |
nD1 |
31-110 |
80 |
e4d94A2 |
4D94 |
10.4.1 |
0.874 |
0.0 |
0.0 |
5.2|5.2|1 |
0.602 |
0.69 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Spermadhesin, CUB domain |
Spermadhesin, CUB domain |
0 |
6 |
yes:out |
no |
PF15869 |
E4T4S2 |
33-321 |
nD1 |
21-340 |
320 |
e3fw0A1 |
3FW0 |
5.1.3 |
0.863 |
0.991 |
0.997 |
21.7|23.3|1 |
0.92 |
0.925 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
27 |
yes:out |
no |
PF15871 |
T1JVF9 |
129-385 |
nD2 |
131-430 |
300 |
e5c1fB1 |
5C1F |
4177.1.1 |
0.853 |
0.205 |
0.0 |
7.1|9.4|0 |
0.456 |
1.202 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
6 |
0 |
no |
no |
PF15871 |
W5N5P9 |
170-432 |
nD4 |
176-240,281-350 |
135 |
e7rdrC2 |
7RDR |
109.3.1 |
0.851 |
0.0 |
0.0 |
11.0|11.0|1 |
0.496 |
0.678 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
4 |
1 |
no |
no |
PF15877 |
G1SXI3 |
40-491 |
nD1 |
46-230,516-530 |
200 |
e7rdrC2 |
7RDR |
109.3.1 |
0.935 |
0.0 |
0.0 |
12.3|12.3|1 |
0.757 |
1.005 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
0 |
no |
yes:1 |
PF15877 |
Q5K6N0 |
40-488 |
nD1 |
46-230 |
185 |
e7rdrC2 |
7RDR |
109.3.1 |
0.943 |
0.0 |
0.0 |
11.5|11.5|1 |
0.743 |
0.93 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
0 |
no |
yes:1 |
PF15882 |
I3MQT4 |
60-338 |
nD1 |
31-290,316-340 |
285 |
e5u2oA2 |
5U2O |
109.2.1 |
0.886 |
0.0 |
0.0 |
13.7|14.0|1 |
0.643 |
0.728 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
alpha/alpha toroid |
alpha/alpha toroid |
10 |
1 |
yes:out |
no |
PF15882 |
F6XS73 |
60-340 |
nD1 |
26-290,316-345 |
295 |
e3kq4C3 |
3KQ4 |
109.2.1 |
0.905 |
0.0 |
0.0 |
10.5|13.6|1 |
0.784 |
0.754 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
alpha/alpha toroid |
alpha/alpha toroid |
10 |
2 |
yes:out |
no |
PF15882 |
B3SDE0 |
53-341 |
nD1 |
26-290,321-355 |
300 |
e3k11A1 |
3K11 |
109.2.1 |
0.898 |
0.0 |
0.0 |
12.8|15.1|1 |
0.656 |
0.766 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
alpha/alpha toroid |
alpha/alpha toroid |
12 |
1 |
yes:out |
yes:out |
PF15883 |
B4N8C5 |
34-210 |
nD2 |
96-195 |
100 |
e2p22A1 |
2P22 |
192.15.1 |
0.933 |
0.0 |
0.0 |
6.3|6.7|0 |
0.533 |
0.93 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
3 |
0 |
no |
yes:out |
PF15906 |
V9IMG2 |
4-78 |
nD1 |
41-85 |
45 |
e3jb9U1 |
3JB9 |
376.1.1 |
0.904 |
0.944 |
0.739 |
0.0|4.2|0 |
0.661 |
0.577 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
1 |
2 |
no |
no |
PF15907 |
F7ARU3 |
49-376 |
nD1 |
6-380 |
375 |
e5o51A1 |
5O51 |
5.1.4 |
0.914 |
0.0 |
0.998 |
20.9|27.6|1 |
0.967 |
1.045 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
28 |
no |
no |
PF15907 |
C3Y6A3 |
49-389 |
nD1 |
6-400 |
395 |
e6rxtUA3 |
6RXT |
5.1.4 |
0.93 |
0.978 |
0.997 |
24.4|28.7|1 |
0.929 |
1.1 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
28 |
no |
no |
PF15907 |
B7PUF6 |
49-360 |
nD1 |
1-364 |
364 |
e4a7zA1 |
4A7Z |
5.1.4 |
0.909 |
0.992 |
0.997 |
24.9|25.5|1 |
0.893 |
1.014 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
25 |
no |
no |
PF15915 |
W0JN33 |
404-563 |
nD4 |
406-550 |
145 |
e3cb4A5 |
3CB4 |
304.24.1 |
0.897 |
0.0 |
0.0 |
8.4|9.1|0 |
0.847 |
1.585 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
4 |
8 |
no |
no |
PF15915 |
M0M461 |
1-157 |
nD1 |
1-145 |
145 |
e5m86H1 |
5M86 |
304.165.1 |
0.943 |
0.0 |
0.664 |
10.2|10.2|1 |
0.9 |
0.906 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Uncharacterized protein Ta1207 |
Uncharacterized protein Ta1207 |
4 |
9 |
no |
no |
PF15920 |
F1N9T8 |
6-154 |
nD2 |
26-145 |
120 |
e5woeA1 |
5WOE |
277.1.1 |
0.887 |
0.0 |
0.0 |
9.2|9.2|1 |
0.877 |
0.902 |
pymol |
more |
good_domain |
a+b two layers |
PX domain |
PX domain |
PX domain |
2 |
3 |
no |
no |
PF15920 |
A0A7J5ZMQ6 |
8-162 |
nD2 |
31-155 |
125 |
e6q0xD1 |
6Q0X |
277.1.1 |
0.932 |
0.671 |
0.0 |
7.1|9.5|1 |
0.787 |
0.94 |
pymol |
more |
good_domain |
a+b two layers |
PX domain |
PX domain |
PX domain |
4 |
3 |
no |
no |
PF15922 |
A0A0M3F3I5 |
1-282 |
nD1 |
1-155 |
155 |
e3k44C1 |
3K44 |
295.1.1 |
0.937 |
0.0 |
0.0 |
7.8|7.8|1 |
0.801 |
1.27 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
4 |
6 |
no |
no |
PF15922 |
A0A0H3GH62 |
1-283 |
nD1 |
6-160 |
155 |
e3k44C1 |
3K44 |
295.1.1 |
0.938 |
0.0 |
0.0 |
8.3|8.3|1 |
0.801 |
1.27 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
4 |
6 |
no |
no |
PF15927 |
T1HD24 |
25-219 |
nD2 |
96-195 |
100 |
e3r6nA3 |
3R6N |
604.1.1 |
0.893 |
0.0 |
0.0 |
7.2|7.2|1 |
0.768 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
1 |
no |
no |
PF15927 |
E2BYG3 |
30-224 |
nD2 |
91-180,421-430 |
100 |
e2iakA1 |
2IAK |
604.1.1 |
0.906 |
0.0 |
0.0 |
8.3|8.3|1 |
0.903 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
no |
PF15928 |
B3MQB0 |
233-511 |
nD3 |
396-510 |
115 |
e3bh7B8 |
3BH7 |
304.34.1 |
0.87 |
0.0 |
0.0 |
6.6|6.6|1 |
0.701 |
0.777 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nucleoside diphosphate kinases |
Nucleoside diphosphate kinases |
4 |
4 |
no |
no |
PF15928 |
B4JIQ9 |
233-554 |
nD3 |
441-550 |
110 |
e3bh7B8 |
3BH7 |
304.34.1 |
0.865 |
0.0 |
0.0 |
6.7|6.7|1 |
0.701 |
0.743 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nucleoside diphosphate kinases |
Nucleoside diphosphate kinases |
3 |
4 |
no |
no |
PF15928 |
Q172W6 |
237-493 |
nD4 |
381-490 |
110 |
e3bh7B8 |
3BH7 |
304.34.1 |
0.866 |
0.0 |
0.0 |
7.1|7.1|1 |
0.752 |
0.743 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nucleoside diphosphate kinases |
Nucleoside diphosphate kinases |
4 |
4 |
no |
no |
PF15931 |
A0A238JUP9 |
18-254 |
nD1 |
6-73,96-235,251-290 |
248 |
e7bxtM2 |
7BXT |
3435.1.1 |
0.898 |
0.0 |
0.157 |
4.9|5.2|1 |
0.925 |
1.879 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
7 |
11 |
no |
no |
PF15931 |
A0A775Y3K4 |
13-269 |
nD1 |
6-75,103-295 |
263 |
e7bxtM2 |
7BXT |
3435.1.1 |
0.89 |
0.0 |
0.121 |
5.5|6.2|1 |
0.938 |
1.992 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
9 |
10 |
no |
no |
PF15931 |
A0A7Y6NVM6 |
11-266 |
nD1 |
1-165,261-294 |
199 |
e7bxtM2 |
7BXT |
3435.1.1 |
0.932 |
0.0 |
0.0 |
7.2|7.9|1 |
0.929 |
1.508 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
6 |
8 |
no |
no |
PF15948 |
A0A749LH97 |
1-151 |
nD1 |
1-150 |
150 |
e5fmnB1 |
5FMN |
3826.1.1 |
0.88 |
0.0 |
0.0 |
5.9|5.9|1 |
0.936 |
1.705 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
6 |
0 |
no |
no |
PF15948 |
A0A753KYH7 |
1-151 |
nD1 |
1-150 |
150 |
e5fmnB1 |
5FMN |
3826.1.1 |
0.874 |
0.0 |
0.0 |
5.4|5.4|1 |
0.922 |
1.705 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
6 |
0 |
no |
no |
PF15948 |
A0A5H6JPH5 |
1-157 |
nD1 |
1-130 |
130 |
e5fmnB1 |
5FMN |
3826.1.1 |
0.893 |
0.0 |
0.0 |
5.7|5.7|1 |
0.92 |
1.477 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
6 |
0 |
no |
no |
PF15958 |
A0A0E1T390 |
12-116 |
nD1 |
36-105 |
70 |
e3zxuB2 |
3ZXU |
4099.1.1 |
0.863 |
0.0 |
0.0 |
3.6|3.6|1 |
0.809 |
0.68 |
pymol |
more |
good_domain |
a+b two layers |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
2 |
4 |
no |
no |
PF15961 |
M3WZA3 |
14-764 |
nD1 |
341-425 |
85 |
e7eg9k1 |
7EG9 |
148.1.1 |
0.925 |
0.0 |
0.0 |
3.7|3.7|1 |
0.674 |
0.914 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
4 |
0 |
no |
no |
PF15961 |
M3XUC7 |
3-767 |
nD2 |
341-420 |
80 |
e7eg9k1 |
7EG9 |
148.1.1 |
0.912 |
0.0 |
0.0 |
3.3|3.3|1 |
0.681 |
0.86 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
4 |
0 |
no |
no |
PF15961 |
G1MIS0 |
122-882 |
nD1 |
471-535 |
65 |
e7eg9k1 |
7EG9 |
148.1.1 |
0.91 |
0.0 |
0.0 |
3.4|3.4|1 |
0.656 |
0.699 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
Histone |
3 |
0 |
no |
no |
PF15968 |
A0A1J7D114 |
9-146 |
nD1 |
11-145 |
135 |
e6y07A1 |
6Y07 |
192.29.1 |
0.928 |
0.0 |
0.0 |
8.4|8.4|1 |
0.81 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF15968 |
A0A5Y1F7F8 |
1-139 |
nD1 |
6-135 |
130 |
e6y07A1 |
6Y07 |
192.29.1 |
0.932 |
0.0 |
0.0 |
8.1|8.1|1 |
0.783 |
1.711 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF15969 |
A0A363ULA1 |
1-234 |
nD1 |
1-65,96-240,246-305 |
270 |
e4je3A1 |
4JE3 |
3435.1.1 |
0.946 |
0.0 |
0.0 |
5.5|6.8|1 |
0.64 |
2.045 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
7 |
12 |
no |
no |
PF15997 |
A0A1B0CX49 |
5-125 |
nD2 |
91-125 |
35 |
e5nbbA1 |
5NBB |
4.1.1 |
0.883 |
0.629 |
0.871 |
0.0|3.1|1 |
0.665 |
0.438 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
0 |
3 |
no |
no |
PF15997 |
A0A1B0D0H8 |
5-125 |
nD2 |
91-125 |
35 |
e5nbbA1 |
5NBB |
4.1.1 |
0.875 |
0.555 |
0.778 |
0.0|3.1|1 |
0.665 |
0.438 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
0 |
3 |
no |
no |
PF16012 |
B4J946 |
359-534 |
nD2 |
361-455 |
95 |
e3n9uC1 |
3N9U |
304.9.1 |
0.869 |
0.0 |
0.0 |
7.9|7.9|1 |
0.86 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
2 |
4 |
no |
no |
PF16013 |
A0A1B0CC06 |
120-409 |
nD2 |
196-375 |
180 |
e6wvdA2 |
6WVD |
174.1.1 |
0.922 |
0.0 |
0.0 |
8.9|8.9|1 |
0.802 |
1.233 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
1 |
no |
yes:4 |
PF16014 |
I3KT60 |
634-1036 |
nD1 |
946-1035 |
90 |
e5xnsA1 |
5XNS |
3922.1.1 |
0.942 |
0.0 |
0.0 |
10.9|10.9|1 |
0.784 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
3 |
0 |
no |
no |
PF16019 |
Q0P4X1 |
68-287 |
nD2 |
221-265 |
45 |
e5fd3B2 |
5FD3 |
3358.1.1 |
0.864 |
0.49 |
0.539 |
0.0|0.0|1 |
0.769 |
0.75 |
pymol |
more |
good_domain |
few secondary structure elements |
Zn3Cys9 preSET domain-related |
Zn3Cys9 preSET domain-related |
Zn3Cys9 preSET domain-related |
0 |
3 |
no |
no |
PF16019 |
K1Q371 |
48-249 |
nD1 |
58-115 |
58 |
e4d10D3 |
4D10 |
3749.2.1 |
0.863 |
0.0 |
0.0 |
2.1|2.9|0 |
0.683 |
1.611 |
pymol |
more |
good_domain |
extended segments |
26S proteasome regulatory subunits C-terminal helices |
26S proteasome regulatory subunit RPN5 C-terminal helix |
26S proteasome regulatory subunit RPN5 C-terminal helix |
1 |
2 |
no |
no |
PF16029 |
A0A2K1IXW7 |
3-71 |
nD1 |
1-80 |
80 |
e3cjhB1 |
3CJH |
4120.1.1 |
0.917 |
0.0 |
0.0 |
3.8|3.8|1 |
0.729 |
1.088 |
pymol |
more |
good_domain |
few secondary structure elements |
Tim10/DDP |
Tim10/DDP |
Tim10/DDP |
3 |
0 |
no |
no |
PF16030 |
B3LYB3 |
24-126 |
nD1 |
31-135 |
105 |
e5mj3A1 |
5MJ3 |
11.1.1 |
0.927 |
0.0 |
0.214 |
2.1|2.6|1 |
0.754 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
yes:out |
no |
PF16039 |
Q9VR87 |
25-187 |
nD1 |
1-190 |
190 |
e7c86A1 |
7C86 |
5001.1.1 |
0.892 |
0.0 |
0.0 |
13.0|13.8|1 |
0.838 |
0.665 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
0 |
yes:in |
yes:5 |
PF16039 |
A0A7R8V0F0 |
28-185 |
nD1 |
6-190 |
185 |
e7c86A1 |
7C86 |
5001.1.1 |
0.872 |
0.0 |
0.0 |
11.8|14.2|1 |
0.811 |
0.648 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
0 |
yes:in |
yes:4 |
PF16039 |
Q9W4S5 |
25-187 |
nD1 |
1-190 |
190 |
e6eyuB1 |
6EYU |
5001.1.1 |
0.882 |
0.0 |
0.0 |
13.7|14.6|1 |
0.867 |
0.665 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
0 |
yes:in |
yes:6 |
PF16040 |
A0A2P2MH29 |
44-113 |
nD1 |
11-210 |
200 |
e5azwA1 |
5AZW |
10.1.2 |
0.92 |
0.954 |
0.951 |
12.1|12.3|1 |
0.989 |
1.274 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
14 |
yes:in |
no |
PF16041 |
A0A2P2KYZ7 |
124-220 |
nD2 |
1-45,156-210 |
100 |
e5azxA1 |
5AZX |
10.1.2 |
0.907 |
0.0 |
0.0 |
7.3|8.4|0 |
0.868 |
0.637 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
9 |
no |
no |
PF16043 |
Q3V2A7 |
97-304 |
nD2 |
181-215,221-245,331-355 |
85 |
e6z26B1 |
6Z26 |
192.8.1 |
0.91 |
0.0 |
0.0 |
5.7|5.7|1 |
0.62 |
1.156 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
no |
PF16051 |
E2AQF7 |
178-223 |
nD1 |
191-280 |
90 |
e6riaP1 |
6RIA |
207.14.1 |
0.852 |
0.0 |
0.0 |
11.4|11.4|1 |
0.854 |
0.933 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Bactofilin A |
Bactofilin A |
0 |
6 |
no |
no |
PF16054 |
C4WUC0 |
17-147 |
nD1 |
6-115,121-150 |
140 |
e4u7oA2 |
4U7O |
605.1.1 |
0.938 |
0.0 |
0.0 |
6.5|7.0|0 |
0.907 |
1.918 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
4 |
0 |
no |
yes:4 |
PF16054 |
B8JII8 |
3-136 |
nD1 |
6-85 |
80 |
e4qpjB2 |
4QPJ |
605.1.1 |
0.937 |
0.0 |
0.0 |
7.5|7.9|0 |
0.902 |
1.096 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
no |
yes:2 |
PF16057 |
E9PYP2 |
1575-1828 |
nD6 |
1186-1285,1426-1720 |
395 |
e6cokA1 |
6COK |
109.4.1 |
0.888 |
0.0 |
0.676 |
9.1|9.7|1 |
0.629 |
1.381 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
15 |
1 |
no |
no |
PF16057 |
A0A6J8AYC5 |
32-285 |
nD1 |
1-155,161-235 |
230 |
e7obaO1 |
7OBA |
109.4.1 |
0.87 |
0.0 |
0.0 |
6.7|8.1|1 |
0.426 |
0.804 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF16058 |
B4I261 |
349-439 |
nD1 |
291-540 |
250 |
e4ay9Y1 |
4AY9 |
207.1.1 |
0.907 |
0.0 |
0.0 |
10.2|10.2|1 |
0.807 |
0.88 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Leucine-rich repeats |
Leucine-rich repeats |
0 |
10 |
yes:out |
no |
PF16075 |
Q31Q94 |
6-577 |
nD1 |
26-170 |
145 |
e2xc8B1 |
2XC8 |
4166.1.1 |
0.927 |
0.0 |
0.567 |
5.4|6.4|1 |
0.629 |
0.924 |
pymol |
more |
good_domain |
beta sandwiches |
Lactophage receptor-binding protein N-terminal domain-like |
Lactophage receptor-binding protein N-terminal domain-like |
Lactophage receptor-binding protein N-terminal domain-like |
1 |
10 |
no |
no |
PF16079 |
A0A1S2MF93 |
17-82 |
nD1 |
6-80 |
75 |
e2mabB1 |
2MAB |
3640.1.1 |
0.851 |
0.0 |
0.0 |
5.3|7.6|1 |
0.664 |
0.625 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Minor ampullate fibroin 1 C-terminal domain |
Minor ampullate fibroin 1 C-terminal domain |
Minor ampullate fibroin 1 C-terminal domain |
3 |
0 |
no |
yes:3 |
PF16079 |
A0A3D0M274 |
14-79 |
nD1 |
6-80 |
75 |
e3h36A1 |
3H36 |
101.11.1 |
0.92 |
0.0 |
0.0 |
6.1|6.1|1 |
0.955 |
0.843 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
3 |
0 |
no |
yes:2 |
PF16083 |
A0A378PIV7 |
15-94 |
nD1 |
6-100 |
95 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.933 |
0.0 |
0.0 |
5.9|5.9|1 |
0.878 |
0.995 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
3 |
0 |
no |
yes:2 |
PF16083 |
A0A198X8J9 |
15-92 |
nD1 |
11-100 |
90 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.933 |
0.0 |
0.0 |
6.4|6.4|1 |
0.819 |
0.942 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
3 |
0 |
no |
yes:3 |
PF16085 |
Q88IF9 |
1-113 |
nD1 |
11-105 |
95 |
e7cgpJ1 |
7CGP |
4120.1.1 |
0.946 |
0.0 |
0.0 |
5.4|5.4|1 |
0.8 |
1.293 |
pymol |
more |
good_domain |
few secondary structure elements |
Tim10/DDP |
Tim10/DDP |
Tim10/DDP |
3 |
0 |
no |
yes:3 |
PF16104 |
Q2FZC0 |
29-133 |
nD1 |
31-133 |
103 |
e1xeeA1 |
1XEE |
221.1.5 |
0.945 |
0.995 |
0.995 |
7.3|7.3|1 |
0.795 |
1.132 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Ubiquitin-related |
Chemotaxis inhibitory protein CHIPS |
2 |
4 |
yes:out |
no |
PF16108 |
A0A502KML4 |
3-126 |
nD1 |
6-125 |
120 |
e2gu3A2 |
2GU3 |
243.3.1 |
0.883 |
0.0 |
0.0 |
5.2|5.2|1 |
0.913 |
1.2 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
5 |
4 |
no |
no |
PF16108 |
A0A396U4X4 |
3-126 |
nD1 |
6-75 |
70 |
e2gu3A2 |
2GU3 |
243.3.1 |
0.919 |
0.0 |
0.0 |
7.0|7.0|1 |
0.913 |
0.7 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
4 |
no |
no |
PF16108 |
Q480B5 |
3-126 |
nD1 |
6-125 |
120 |
e2gu3A2 |
2GU3 |
243.3.1 |
0.883 |
0.0 |
0.0 |
5.3|5.3|1 |
0.913 |
1.2 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
5 |
4 |
no |
no |
PF16110 |
A0A0R2I8G0 |
2-80 |
nD1 |
1-84 |
84 |
e1ei5A1 |
1EI5 |
9.4.1 |
0.932 |
0.0 |
0.0 |
7.9|8.1|1 |
0.898 |
0.87 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
0 |
8 |
no |
no |
PF16110 |
A0A0R1LNP9 |
3-80 |
nD1 |
1-80 |
80 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.898 |
0.0 |
0.372 |
7.4|8.4|1 |
0.781 |
0.523 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
0 |
8 |
no |
no |
PF16110 |
H1LGT3 |
1-76 |
nD1 |
1-80 |
80 |
e5halA1 |
5HAL |
9.1.1 |
0.869 |
0.0 |
0.548 |
7.5|7.5|1 |
0.804 |
0.523 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
0 |
8 |
no |
no |
PF16119 |
R7JMA9 |
27-302 |
nD1 |
26-300 |
275 |
e6pnvA1 |
6PNV |
7503.1.1 |
0.869 |
0.0 |
0.0 |
4.0|5.1|0 |
0.819 |
1.821 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
10 |
4 |
yes:out |
no |
PF16119 |
D1P9W6 |
1-277 |
nD1 |
1-279 |
279 |
e2d2sA1 |
2D2S |
109.4.1 |
0.909 |
0.0 |
0.0 |
4.6|5.1|1 |
0.723 |
0.976 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
4 |
no |
no |
PF16120 |
R5NR46 |
31-492 |
nD1 |
31-50,86-175,186-265,416-435,466-495 |
240 |
e3k8gA1 |
3K8G |
881.3.1 |
0.936 |
0.207 |
0.573 |
9.2|9.2|1 |
0.681 |
0.949 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Outer membrane-associated lipoprotein TP0453 |
Outer membrane-associated lipoprotein TP0453 |
10 |
13 |
yes:out |
no |
PF16120 |
R6MCT7 |
26-503 |
nD1 |
23-190 |
168 |
e3k8gA1 |
3K8G |
881.3.1 |
0.882 |
0.0 |
0.494 |
8.9|8.9|1 |
0.454 |
0.664 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Outer membrane-associated lipoprotein TP0453 |
Outer membrane-associated lipoprotein TP0453 |
6 |
7 |
yes:out |
no |
PF16126 |
D3F845 |
241-559 |
nD3 |
266-735 |
470 |
e4p7nA1 |
4P7N |
2002.1.1 |
0.913 |
0.97 |
0.996 |
7.0|12.8|1 |
0.759 |
1.502 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
16 |
7 |
yes:out |
no |
PF16128 |
A0A1Q6HGX9 |
13-168 |
nD1 |
1-189 |
189 |
e2lfuA1 |
2LFU |
5084.1.1 |
0.855 |
0.0 |
0.0 |
6.9|8.7|0 |
0.919 |
1.068 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
4 |
10 |
no |
no |
PF16128 |
A0A511YA05 |
16-146 |
nD1 |
11-165 |
155 |
e2ervA1 |
2ERV |
5084.1.1 |
0.911 |
0.0 |
0.0 |
8.4|8.4|1 |
0.883 |
0.876 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
3 |
10 |
no |
no |
PF16135 |
A0A3S3R3E0 |
834-882 |
nD2 |
816-885 |
70 |
e1oqjA1 |
1OQJ |
4.2.1 |
0.91 |
0.0 |
0.0 |
6.7|6.7|1 |
0.757 |
0.745 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SAND |
SAND |
3 |
6 |
no |
no |
PF16135 |
W1PAH6 |
634-689 |
nD5 |
606-690 |
85 |
e1oqjA1 |
1OQJ |
4.2.1 |
0.889 |
0.234 |
0.0 |
5.2|5.5|1 |
0.765 |
0.904 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SAND |
SAND |
3 |
6 |
no |
no |
PF16137 |
A0A2R3IXY1 |
22-107 |
nD1 |
1-115 |
115 |
e5g24A1 |
5G24 |
274.1.1 |
0.861 |
0.726 |
0.861 |
3.6|5.5|0 |
0.698 |
0.935 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
3 |
3 |
yes:in |
no |
PF16138 |
A0A496MYI5 |
3-239 |
nD1 |
1-240 |
240 |
e2k1gA1 |
2K1G |
219.1.1 |
0.925 |
0.0 |
0.865 |
6.6|6.6|1 |
0.864 |
1.071 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
14 |
no |
no |
PF16138 |
A0A3P2AP34 |
3-241 |
nD1 |
1-244 |
244 |
e2k1gA1 |
2K1G |
219.1.1 |
0.934 |
0.0 |
0.802 |
7.3|7.3|1 |
0.882 |
1.089 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
6 |
11 |
no |
no |
PF16138 |
A0A7X7AAB9 |
3-240 |
nD1 |
1-243 |
243 |
e2k1gA1 |
2K1G |
219.1.1 |
0.931 |
0.0 |
0.858 |
7.2|7.2|1 |
0.88 |
1.085 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
13 |
no |
no |
PF16142 |
H6NDL4 |
161-348 |
nD1 |
146-355 |
210 |
e6kacp1 |
6KAC |
881.1.1 |
0.942 |
0.782 |
0.925 |
8.2|9.5|1 |
0.796 |
1.277 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
11 |
yes:out |
no |
PF16142 |
Q6FDZ2 |
40-226 |
nD1 |
26-58,81-230 |
183 |
e7cu9B1 |
7CU9 |
881.1.1 |
0.913 |
0.0 |
0.879 |
7.9|9.0|1 |
0.791 |
1.112 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
4 |
11 |
no |
no |
PF16153 |
R6CGM6 |
34-413 |
nD2 |
111-410 |
300 |
e6y86A1 |
6Y86 |
12.3.1 |
0.927 |
0.0 |
0.959 |
12.3|13.8|1 |
0.967 |
1.068 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
5 |
18 |
yes:out |
no |
PF16153 |
R7DGK6 |
27-409 |
nD2 |
106-160,181-413 |
288 |
e6y86A1 |
6Y86 |
12.3.1 |
0.918 |
0.0 |
0.962 |
10.9|13.7|1 |
0.949 |
1.025 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
5 |
20 |
yes:out |
no |
PF16153 |
A0A2L2WLU9 |
10-388 |
nD2 |
86-389 |
304 |
e6y86A1 |
6Y86 |
12.3.1 |
0.903 |
0.0 |
0.965 |
12.7|14.4|1 |
0.964 |
1.082 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
2 |
17 |
no |
no |
PF16160 |
A0A373Y504 |
3-246 |
nD1 |
6-85 |
80 |
e1v66A1 |
1V66 |
130.1.1 |
0.854 |
0.0 |
0.0 |
3.2|3.2|1 |
0.835 |
1.455 |
pymol |
more |
good_domain |
alpha arrays |
LEM/SAP HeH motif-like |
LEM/SAP HeH motif |
LEM/SAP HeH motif |
4 |
0 |
no |
no |
PF16162 |
A0A478PPD3 |
108-281 |
nD2 |
186-290 |
105 |
e2eh6A2 |
2EH6 |
3016.1.1 |
0.852 |
0.0 |
0.0 |
2.9|3.4|1 |
0.767 |
0.946 |
pymol |
more |
good_domain |
a+b two layers |
C-terminal domain in some PLP-dependent transferases |
C-terminal domain in some PLP-dependent transferases |
C-terminal domain in some PLP-dependent transferases |
4 |
4 |
no |
no |
PF16163 |
A0A3D0DKJ8 |
15-140 |
nD1 |
1-149 |
149 |
e6qj0A2 |
6QJ0 |
2004.1.1 |
0.859 |
0.354 |
0.365 |
2.5|4.8|1 |
0.508 |
0.668 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
8 |
7 |
no |
no |
PF16169 |
A0A2W7TRX1 |
153-323 |
nD2 |
186-325 |
140 |
e6egcA1 |
6EGC |
192.29.1 |
0.948 |
0.0 |
0.0 |
9.3|9.3|1 |
0.805 |
1.842 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
1 |
no |
no |
PF16223 |
C0VPF2 |
30-296 |
nD1 |
51-298 |
248 |
e6m15A3 |
6M15 |
10.1.1 |
0.872 |
0.0 |
0.251 |
7.3|9.8|1 |
0.88 |
1.159 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
1 |
13 |
yes:out |
no |
PF16223 |
D0RY04 |
51-316 |
nD1 |
71-318 |
248 |
e1w2tC1 |
1W2T |
10.1.1 |
0.877 |
0.0 |
0.314 |
6.7|9.5|1 |
0.948 |
1.159 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
1 |
15 |
yes:out |
no |
PF16223 |
L9ME48 |
3-274 |
nD1 |
6-275 |
270 |
e3lfiA6 |
3LFI |
10.1.1 |
0.882 |
0.0 |
0.251 |
8.5|11.0|1 |
0.942 |
1.262 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
3 |
15 |
no |
no |
PF16236 |
A0A101EH00 |
12-234 |
nD2 |
136-255 |
120 |
e2phcB2 |
2PHC |
306.6.1 |
0.936 |
0.0 |
0.0 |
5.8|5.8|1 |
0.93 |
1.42 |
pymol |
more |
good_domain |
a+b two layers |
Glucose permease domain IIB-like |
PH0987 N-terminal domain-like |
PH0987 N-terminal domain-like |
4 |
4 |
no |
no |
PF16237 |
A8F5P3 |
12-55 |
nD1 |
6-55 |
50 |
e3rlfF5 |
3RLF |
4274.1.1 |
0.862 |
1.0 |
0.978 |
0.0|4.9|0 |
0.923 |
0.962 |
pymol |
more |
good_domain |
extended segments |
Transmembrane helices in MalF N-terminal region |
Transmembrane helices in MalF N-terminal region |
Transmembrane helices in MalF N-terminal region |
2 |
0 |
no |
yes:2 |
PF16244 |
A0A1Y0YAP3 |
242-393 |
nD4 |
231-400 |
170 |
e5boiA3 |
5BOI |
243.3.1 |
0.943 |
0.998 |
0.992 |
5.9|6.3|0 |
0.966 |
1.7 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
8 |
no |
no |
PF16246 |
R5F9A2 |
22-218 |
nD1 |
36-210 |
175 |
e1p4tA1 |
1P4T |
5084.1.1 |
0.854 |
0.0 |
0.0 |
8.7|8.7|1 |
0.841 |
0.989 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
2 |
9 |
yes:out |
no |
PF16248 |
A0A1S9PFI1 |
19-101 |
nD1 |
1-250 |
250 |
e3mbrX1 |
3MBR |
5.1.4 |
0.94 |
0.935 |
0.983 |
8.8|10.0|1 |
0.642 |
0.696 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
21 |
no |
no |
PF16248 |
A0A4Y8S4V8 |
21-103 |
nD1 |
6-250 |
245 |
e3nolA1 |
3NOL |
5.1.3 |
0.946 |
0.928 |
0.964 |
8.4|10.5|0 |
0.581 |
0.708 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
21 |
no |
no |
PF16250 |
A0A679HQT7 |
3-67 |
nD1 |
1-70 |
70 |
e3bidH1 |
3BID |
4325.1.1 |
0.924 |
0.645 |
0.592 |
3.9|4.5|1 |
0.862 |
1.207 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
2 |
3 |
no |
no |
PF16250 |
A0A261Q0U8 |
30-98 |
nD1 |
26-100 |
75 |
e2k49A2 |
2K49 |
4325.1.1 |
0.865 |
0.0 |
0.819 |
4.5|4.9|0 |
0.937 |
1.293 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
2 |
3 |
no |
yes:out |
PF16252 |
B4REA5 |
33-251 |
nD1 |
51-135 |
85 |
e2qmiB3 |
2QMI |
9.4.1 |
0.931 |
0.0 |
0.0 |
7.4|7.4|1 |
0.874 |
0.881 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
1 |
7 |
yes:out |
no |
PF16252 |
Q9AAT2 |
66-287 |
nD1 |
86-170 |
85 |
e4misA1 |
4MIS |
9.11.1 |
0.865 |
0.0 |
0.0 |
7.2|7.2|1 |
0.835 |
0.885 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
YdhA-like |
YdhA-like |
1 |
7 |
yes:out |
no |
PF16252 |
E8RKW6 |
42-262 |
nD1 |
61-145 |
85 |
e4misA1 |
4MIS |
9.11.1 |
0.87 |
0.0 |
0.0 |
6.4|6.4|1 |
0.841 |
0.885 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
YdhA-like |
YdhA-like |
1 |
7 |
yes:out |
no |
PF16256 |
A0A1F9N3F5 |
9-62 |
nD1 |
6-65 |
60 |
e2cveA1 |
2CVE |
304.24.1 |
0.946 |
0.668 |
0.92 |
8.0|8.1|0 |
0.859 |
0.656 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
2 |
3 |
no |
no |
PF16256 |
A0A1F9PGC0 |
9-62 |
nD1 |
6-65 |
60 |
e2cveA1 |
2CVE |
304.24.1 |
0.946 |
0.668 |
0.92 |
8.0|8.1|0 |
0.859 |
0.656 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
2 |
3 |
no |
no |
PF16259 |
A0A7K2MFI5 |
2-95 |
nD1 |
1-95 |
95 |
e6ahxA1 |
6AHX |
3826.1.1 |
0.852 |
0.0 |
0.0 |
3.7|3.7|1 |
0.919 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
3 |
0 |
no |
no |
PF16260 |
A0A644XHG8 |
15-626 |
nD2 |
236-625 |
390 |
e3mofA1 |
3MOF |
2004.1.2 |
0.947 |
1.0 |
1.0 |
21.6|23.1|1 |
0.933 |
1.23 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
PEP carboxykinase catalytic C-terminal domain |
10 |
19 |
no |
no |
PF16261 |
A0A521V542 |
11-326 |
nD1 |
1-343 |
343 |
e4p04A1 |
4P04 |
5.1.3 |
0.858 |
0.986 |
0.994 |
19.3|23.5|1 |
0.841 |
0.991 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
3 |
25 |
no |
no |
PF16261 |
A0A7X8SKS2 |
11-327 |
nD1 |
6-345 |
340 |
e4p04A1 |
4P04 |
5.1.3 |
0.904 |
0.984 |
0.994 |
21.1|24.6|1 |
0.857 |
0.983 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
4 |
27 |
no |
no |
PF16261 |
A0A2T4WZN5 |
14-327 |
nD1 |
1-350 |
350 |
e4p04A1 |
4P04 |
5.1.3 |
0.855 |
0.985 |
0.994 |
20.8|24.3|1 |
0.85 |
1.012 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
4 |
27 |
no |
no |
PF16270 |
F9ZAK8 |
27-202 |
nD1 |
41-200 |
160 |
e4nw4A2 |
4NW4 |
9.1.1 |
0.926 |
0.0 |
0.951 |
9.1|9.5|0 |
0.886 |
1.046 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
5 |
8 |
yes:out |
no |
PF16270 |
R7DJN3 |
25-205 |
nD1 |
46-205 |
160 |
e4zgfA1 |
4ZGF |
9.1.1 |
0.858 |
0.902 |
0.915 |
6.9|7.6|0 |
0.716 |
1.046 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
4 |
8 |
yes:out |
no |
PF16287 |
Q5LDL6 |
61-435 |
nD1 |
76-455 |
380 |
e4raaA1 |
4RAA |
5.1.3 |
0.856 |
1.0 |
1.0 |
21.4|21.4|1 |
0.932 |
1.098 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
5 |
27 |
yes:out |
no |
PF16288 |
E5VEL9 |
33-135 |
nD1 |
6-390 |
385 |
e4raaA1 |
4RAA |
5.1.3 |
0.904 |
1.0 |
1.0 |
24.3|24.3|1 |
0.95 |
1.113 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
7 |
28 |
no |
no |
PF16288 |
A0A015V869 |
42-142 |
nD1 |
26-395 |
370 |
e4raaA1 |
4RAA |
5.1.3 |
0.923 |
1.0 |
1.0 |
24.4|24.4|1 |
0.944 |
1.069 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
5 |
28 |
yes:out |
no |
PF16288 |
D9ZEZ5 |
33-135 |
nD1 |
6-390 |
385 |
e4raaA1 |
4RAA |
5.1.3 |
0.903 |
1.0 |
1.0 |
24.4|24.4|1 |
0.951 |
1.113 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
7 |
28 |
no |
no |
PF16292 |
A0A2H3KQA3 |
4-312 |
nD1 |
6-120 |
115 |
e3io0A1 |
3IO0 |
304.54.1 |
0.93 |
0.0 |
0.0 |
6.8|7.3|1 |
0.87 |
1.127 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
3 |
4 |
no |
no |
PF16292 |
E1IAN3 |
4-301 |
nD1 |
6-115 |
110 |
e3io0A1 |
3IO0 |
304.54.1 |
0.932 |
0.0 |
0.0 |
6.8|7.2|1 |
0.865 |
1.078 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
3 |
4 |
no |
no |
PF16292 |
A0A3M1W786 |
4-305 |
nD1 |
6-120 |
115 |
e7dhqA2 |
7DHQ |
304.54.1 |
0.934 |
0.0 |
0.0 |
6.8|7.3|1 |
0.886 |
1.127 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
3 |
4 |
no |
no |
PF16298 |
A5IJ53 |
37-240 |
nD1 |
1-75 |
75 |
e5mu7B1 |
5MU7 |
223.2.1 |
0.871 |
0.0 |
0.0 |
5.9|5.9|1 |
0.675 |
0.536 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
profilin-like |
profilin-like |
2 |
4 |
no |
no |
PF16305 |
K8E223 |
49-212 |
nD1 |
81-215 |
135 |
e4ifaA1 |
4IFA |
6043.1.1 |
0.876 |
0.0 |
0.279 |
4.2|5.8|0 |
0.868 |
1.646 |
pymol |
more |
good_domain |
a+b two layers |
yfeY-like |
yfeY-like |
yfeY-like |
4 |
7 |
yes:out |
no |
PF16308 |
Q830I7 |
134-311 |
nD2 |
181-270 |
90 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.904 |
0.0 |
0.0 |
7.8|7.8|1 |
0.812 |
0.588 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
1 |
8 |
yes:out |
no |
PF16313 |
A0A3M2BX16 |
379-681 |
nD3 |
501-755 |
255 |
e6ozuA1 |
6OZU |
109.4.1 |
0.934 |
0.0 |
0.0 |
7.6|9.6|1 |
0.664 |
0.892 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
2 |
no |
no |
PF16313 |
A0A2G0CKN7 |
394-698 |
nD4 |
376-395,516-775 |
280 |
e2a2fX1 |
2A2F |
109.4.1 |
0.934 |
0.0 |
0.0 |
5.7|10.5|1 |
0.794 |
0.979 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
2 |
no |
no |
PF16314 |
R6SVY6 |
4-436 |
nD1 |
6-660 |
655 |
e5depD1 |
5DEP |
208.1.1 |
0.889 |
0.99 |
0.995 |
15.3|21.2|1 |
0.875 |
3.68 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded left-handed beta-helix |
Trimeric LpxA-like enzymes |
Trimeric LpxA-like enzymes |
14 |
32 |
no |
no |
PF16316 |
I0HBY6 |
10-177 |
nD2 |
136-180 |
45 |
e5gyyG1 |
5GYY |
387.1.5 |
0.874 |
0.0 |
0.0 |
4.2|5.1|0 |
0.753 |
1.023 |
pymol |
more |
good_domain |
few secondary structure elements |
omega toxin-like |
omega toxin-related |
Scorpion toxin-like |
1 |
2 |
yes:out |
yes:out |
PF16324 |
D8DUK9 |
171-428 |
nD3 |
166-430 |
265 |
e3uowA5 |
3UOW |
2007.1.1 |
0.945 |
0.0 |
0.986 |
13.7|14.1|1 |
0.966 |
1.25 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Class I glutamine amidotransferase-like |
6 |
11 |
no |
no |
PF16328 |
A0A4V3GKM9 |
13-319 |
nD1 |
26-215 |
190 |
e4d94A6 |
4D94 |
11.1.1 |
0.924 |
0.0 |
0.419 |
8.0|9.0|1 |
0.974 |
1.759 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
12 |
no |
yes:1 |
PF16328 |
Q8A0D4 |
10-321 |
nD1 |
26-215 |
190 |
e7nxdA3 |
7NXD |
11.1.1 |
0.943 |
0.0 |
0.225 |
9.8|9.8|1 |
0.943 |
1.759 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
11 |
no |
yes:out |
PF16328 |
G8TN39 |
20-318 |
nD1 |
36-215 |
180 |
e4d94A6 |
4D94 |
11.1.1 |
0.943 |
0.0 |
0.415 |
8.3|9.2|1 |
0.975 |
1.667 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
11 |
no |
yes:1 |
PF16341 |
R5RWC8 |
1-128 |
nD1 |
26-110 |
85 |
e4ftdA1 |
4FTD |
6082.1.1 |
0.854 |
0.0 |
0.0 |
3.9|3.9|1 |
0.857 |
0.895 |
pymol |
more |
good_domain |
beta sandwiches |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
1 |
7 |
yes:out |
no |
PF16341 |
A0A174PXF8 |
2-141 |
nD1 |
36-120 |
85 |
e4ftdA1 |
4FTD |
6082.1.1 |
0.873 |
0.0 |
0.0 |
8.0|8.2|1 |
0.801 |
0.895 |
pymol |
more |
good_domain |
beta sandwiches |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
0 |
7 |
yes:out |
no |
PF16341 |
Q8A3Y0 |
1-140 |
nD1 |
36-120 |
85 |
e4ftdA1 |
4FTD |
6082.1.1 |
0.933 |
0.0 |
0.0 |
7.2|7.4|1 |
0.805 |
0.895 |
pymol |
more |
good_domain |
beta sandwiches |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
N-terminal domain of BT_2081-like |
1 |
7 |
yes:out |
no |
PF16342 |
A0A139K2A0 |
1-124 |
nD1 |
36-125 |
90 |
e3rguA1 |
3RGU |
632.1.1 |
0.932 |
0.0 |
0.0 |
9.2|9.2|0 |
0.856 |
0.8 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Families 57/38 glycoside transferase middle domain |
Families 57/38 glycoside transferase middle domain |
3 |
1 |
yes:out |
no |
PF16351 |
A0A173WS68 |
299-470 |
nD4 |
301-478 |
178 |
e1wkyA1 |
1WKY |
10.1.2 |
0.932 |
0.0 |
0.0 |
9.3|10.3|1 |
0.916 |
1.134 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
16 |
yes:out |
no |
PF16352 |
U2KM86 |
7-115 |
nD1 |
1-95 |
95 |
e4n0rA3 |
4N0R |
12.1.1 |
0.864 |
0.0 |
0.0 |
5.3|5.4|0 |
0.806 |
1.056 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
2 |
8 |
no |
no |
PF16352 |
E5VAH6 |
6-106 |
nD1 |
1-100 |
100 |
e4n0rA3 |
4N0R |
12.1.1 |
0.938 |
0.0 |
0.0 |
5.6|5.6|1 |
0.805 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
8 |
no |
no |
PF16352 |
A0A078S064 |
6-106 |
nD1 |
1-100 |
100 |
e4n0rA3 |
4N0R |
12.1.1 |
0.948 |
0.0 |
0.0 |
5.6|5.6|1 |
0.805 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
1 |
8 |
no |
no |
PF16357 |
E8V026 |
7-190 |
nD2 |
6-40,121-185 |
100 |
e1kf6O1 |
1KF6 |
5069.1.3 |
0.949 |
0.291 |
0.439 |
5.5|5.9|0 |
0.677 |
0.775 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
4 |
0 |
no |
yes:3 |
PF16361 |
A0A4Y1WMC3 |
28-175 |
nD1 |
21-130 |
110 |
e6tpiB1 |
6TPI |
304.4.1 |
0.929 |
0.448 |
0.396 |
7.7|7.7|1 |
0.86 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
5 |
4 |
no |
no |
PF16370 |
F0SB88 |
467-649 |
nD3 |
231-550,601-615 |
335 |
e2yeqB2 |
2YEQ |
246.2.1 |
0.888 |
0.998 |
0.998 |
18.1|22.4|1 |
0.865 |
1.132 |
pymol |
more |
good_domain |
a+b four layers |
Carbon-nitrogen hydrolase-like |
Metallo-dependent phosphatases |
Metallo-dependent phosphatases |
8 |
16 |
no |
no |
PF16395 |
A0A090X5Y1 |
3-128 |
nD1 |
1-130 |
130 |
e4qrlA1 |
4QRL |
9.23.1 |
0.927 |
0.964 |
0.888 |
9.6|9.6|1 |
0.857 |
1.182 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Hypothetical protein BT_0869 |
Hypothetical protein BT_0869 |
1 |
9 |
no |
no |
PF16398 |
Q8AB40 |
5-289 |
nD1 |
11-120 |
110 |
e5hbbC2 |
5HBB |
11.1.4 |
0.925 |
0.0 |
0.0 |
2.5|7.6|0 |
0.735 |
0.88 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
7 |
no |
no |
PF16401 |
R6N358 |
4-263 |
nD2 |
6-110,177-465 |
394 |
e5w3sC1 |
5W3S |
5054.1.1 |
0.946 |
0.0 |
0.0 |
9.9|9.9|1 |
0.645 |
1.728 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
13 |
0 |
no |
yes:12 |
PF16401 |
H1Y6N2 |
12-268 |
nD1 |
16-115,181-410,446-465 |
350 |
e6a2jA1 |
6A2J |
5069.1.1 |
0.944 |
0.0 |
0.027 |
6.0|6.6|0 |
0.711 |
1.651 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
13 |
0 |
no |
yes:11 |
PF16402 |
B4D018 |
37-374 |
nD1 |
11-130,146-365 |
340 |
e6zfnAAA1 |
6ZFN |
2002.1.1 |
0.94 |
1.0 |
1.0 |
23.0|23.0|1 |
0.887 |
1.086 |
pymol |
na |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
8 |
10 |
no |
no |
PF16405 |
A0A5C6LJN4 |
117-259 |
nD2 |
111-274 |
164 |
e3ecqB13 |
3ECQ |
10.1.2 |
0.932 |
0.0 |
0.478 |
9.9|11.7|1 |
0.945 |
1.045 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
9 |
no |
no |
PF16405 |
A0A4V2TSM1 |
214-346 |
nD3 |
206-369 |
164 |
e2xonL1 |
2XON |
10.1.2 |
0.932 |
0.0 |
0.88 |
12.0|12.0|1 |
0.921 |
1.045 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
3 |
9 |
no |
no |
PF16406 |
A0A412BTG1 |
275-362 |
nD3 |
271-630 |
360 |
e5jowA2 |
5JOW |
10.1.1 |
0.867 |
0.0 |
0.999 |
12.9|23.5|1 |
0.957 |
1.682 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
8 |
20 |
yes:out |
no |
PF16406 |
A0A1G6GB52 |
275-362 |
nD3 |
261-630 |
370 |
e5jowA2 |
5JOW |
10.1.1 |
0.866 |
0.0 |
0.999 |
12.8|23.7|1 |
0.965 |
1.729 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
8 |
19 |
yes:out |
no |
PF16406 |
A0A1G8N089 |
275-362 |
nD3 |
261-630 |
370 |
e5jowA2 |
5JOW |
10.1.1 |
0.864 |
0.0 |
0.999 |
12.9|23.5|1 |
0.957 |
1.729 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
8 |
19 |
yes:out |
no |
PF16412 |
X5DGT6 |
19-232 |
nD1 |
6-230 |
225 |
e1tlyA1 |
1TLY |
5084.6.1 |
0.917 |
1.0 |
1.0 |
18.1|18.1|1 |
0.765 |
0.843 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Tsx-like channel |
Tsx-like channel |
1 |
13 |
yes:in |
no |
PF16412 |
R7CVX6 |
19-232 |
nD1 |
16-233 |
218 |
e1tlyA1 |
1TLY |
5084.6.1 |
0.923 |
1.0 |
1.0 |
18.4|18.4|1 |
0.765 |
0.816 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Tsx-like channel |
Tsx-like channel |
2 |
13 |
yes:out |
no |
PF16412 |
F9D6P4 |
19-246 |
nD1 |
21-245 |
225 |
e1tlyA1 |
1TLY |
5084.6.1 |
0.91 |
1.0 |
1.0 |
17.5|17.5|1 |
0.753 |
0.843 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Tsx-like channel |
Tsx-like channel |
3 |
14 |
yes:out |
no |
PF16424 |
A0A3D4L323 |
45-200 |
nD1 |
36-200 |
165 |
e3g20B1 |
3G20 |
274.1.1 |
0.883 |
0.848 |
0.982 |
2.8|3.7|0 |
0.79 |
1.341 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
4 |
6 |
no |
yes:out |
PF16433 |
G5GB95 |
12-325 |
nD1 |
161-170,221-325 |
115 |
e4g7xB1 |
4G7X |
272.1.1 |
0.935 |
0.0 |
0.0 |
4.1|4.9|1 |
0.793 |
1.179 |
pymol |
more |
good_domain |
a+b two layers |
TolA/TonB C-terminal domain |
TolA/TonB C-terminal domain |
TolA/TonB C-terminal domain |
3 |
7 |
yes:out |
no |
PF16434 |
A0A4Q0TU03 |
15-391 |
nD2 |
196-385 |
190 |
e4gpvB5 |
4GPV |
11.1.4 |
0.919 |
0.831 |
0.0 |
3.9|10.2|1 |
0.797 |
1.52 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
9 |
yes:out |
no |
PF16434 |
Q5LAF2 |
1-377 |
nD2 |
181-249,276-365 |
159 |
e4rdbA2 |
4RDB |
11.1.4 |
0.945 |
0.906 |
0.0 |
3.3|10.3|1 |
0.825 |
1.272 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
8 |
yes:out |
no |
PF16435 |
A0A3R6C5H1 |
19-276 |
nD1 |
26-275 |
250 |
e4ghbB1 |
4GHB |
5084.5.1 |
0.874 |
0.997 |
0.997 |
13.3|14.7|1 |
0.754 |
0.679 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
16 |
yes:out |
no |
PF16435 |
A0A1Q6FJV4 |
19-276 |
nD1 |
31-270 |
240 |
e4ghbB1 |
4GHB |
5084.5.1 |
0.883 |
0.997 |
0.997 |
13.4|14.9|1 |
0.75 |
0.652 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
16 |
yes:out |
no |
PF16435 |
A0A496BT54 |
19-276 |
nD1 |
26-275 |
250 |
e4ghbB1 |
4GHB |
5084.5.1 |
0.874 |
0.997 |
0.997 |
13.4|14.7|1 |
0.75 |
0.679 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
16 |
yes:out |
no |
PF16437 |
A0A0Q0VA75 |
37-197 |
nD1 |
31-74,97-200 |
148 |
e4lbaB1 |
4LBA |
11.1.1 |
0.947 |
0.52 |
0.673 |
4.7|6.1|1 |
0.94 |
1.37 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
9 |
yes:out |
no |
PF16437 |
Q8A0V8 |
39-188 |
nD1 |
36-193 |
158 |
e2ibgA1 |
2IBG |
11.1.1 |
0.939 |
0.0 |
0.565 |
7.1|7.6|1 |
0.939 |
1.463 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
9 |
yes:out |
no |
PF16438 |
A0A173XVW8 |
16-160 |
nD1 |
21-165 |
145 |
e1g0dA3 |
1G0D |
11.1.1 |
0.949 |
0.0 |
0.304 |
5.9|9.8|0 |
0.972 |
1.343 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
yes:out |
no |
PF16441 |
A0A1Y3TFC1 |
43-185 |
nD1 |
61-135 |
75 |
e2k3dA1 |
2K3D |
243.10.1 |
0.876 |
0.75 |
0.892 |
3.4|4.1|0 |
0.621 |
0.862 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Lin0334 protein |
Lin0334 protein |
3 |
4 |
no |
yes:out |
PF16447 |
G9YSI2 |
36-214 |
nD2 |
106-215 |
110 |
e5euvB4 |
5EUV |
11.1.1 |
0.947 |
0.0 |
0.469 |
5.0|5.7|1 |
0.835 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:out |
no |
PF16447 |
H1CDV9 |
35-207 |
nD1 |
36-100 |
65 |
e5boiA2 |
5BOI |
243.3.1 |
0.948 |
0.0 |
0.0 |
6.5|6.7|0 |
0.936 |
0.65 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
yes:out |
no |
PF16468 |
A0A831TPD3 |
6-57 |
nD1 |
1-64 |
64 |
e4b4cA6 |
4B4C |
101.1.1 |
0.892 |
0.0 |
0.0 |
3.2|3.2|1 |
0.822 |
0.877 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
2 |
no |
no |
PF16477 |
A0A2V9V4I8 |
189-452 |
nD2 |
186-300 |
115 |
e1ufaA1 |
1UFA |
632.1.1 |
0.894 |
0.987 |
0.966 |
3.9|4.3|0 |
0.792 |
1.022 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Families 57/38 glycoside transferase middle domain |
Families 57/38 glycoside transferase middle domain |
5 |
1 |
no |
no |
PF16478 |
A0A1C6L0G8 |
1-105 |
nD1 |
1-90 |
90 |
e2le4A1 |
2LE4 |
190.1.1 |
0.851 |
0.0 |
0.0 |
3.3|3.3|1 |
0.593 |
1.084 |
pymol |
more |
good_domain |
alpha arrays |
HMG-box |
HMG-box |
HMG-box |
4 |
2 |
no |
no |
PF16478 |
D7GNW2 |
1-105 |
nD1 |
6-90 |
85 |
e2le4A1 |
2LE4 |
190.1.1 |
0.855 |
0.0 |
0.0 |
3.3|3.3|1 |
0.642 |
1.024 |
pymol |
more |
good_domain |
alpha arrays |
HMG-box |
HMG-box |
HMG-box |
4 |
2 |
no |
no |
PF16478 |
R6N220 |
1-105 |
nD1 |
1-90 |
90 |
e2le4A1 |
2LE4 |
190.1.1 |
0.851 |
0.0 |
0.0 |
3.2|3.2|1 |
0.593 |
1.084 |
pymol |
more |
good_domain |
alpha arrays |
HMG-box |
HMG-box |
HMG-box |
4 |
2 |
no |
no |
PF16493 |
H2XW51 |
62-145 |
nD1 |
31-140 |
110 |
e3h3mA1 |
3H3M |
3718.1.1 |
0.936 |
0.0 |
0.0 |
7.4|7.4|1 |
0.876 |
1.202 |
pymol |
more |
good_domain |
alpha bundles |
Flagellar protein fliT |
Flagellar protein fliT |
Flagellar protein fliT |
4 |
0 |
no |
no |
PF16493 |
A0A068YAB4 |
231-313 |
nD1 |
176-205,231-300 |
100 |
e6ch2E1 |
6CH2 |
3718.1.1 |
0.888 |
0.0 |
0.0 |
5.9|6.2|0 |
0.786 |
1.093 |
pymol |
more |
good_domain |
alpha bundles |
Flagellar protein fliT |
Flagellar protein fliT |
Flagellar protein fliT |
4 |
0 |
no |
no |
PF16502 |
A0A1H9J5J5 |
47-670 |
nD2 |
276-585 |
310 |
e7rdrC2 |
7RDR |
109.3.1 |
0.879 |
0.241 |
0.0 |
7.1|11.5|0 |
0.496 |
1.558 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
12 |
0 |
yes:out |
no |
PF16502 |
M0DU20 |
1-617 |
nD2 |
226-325 |
100 |
e5xsjL1 |
5XSJ |
601.4.1 |
0.856 |
0.0 |
0.0 |
11.9|11.9|1 |
0.799 |
0.694 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF16502 |
M0DU20 |
1-617 |
nD3 |
326-430 |
105 |
e5xsjL1 |
5XSJ |
601.4.1 |
0.856 |
0.0 |
0.0 |
11.9|11.9|1 |
0.807 |
0.729 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF16502 |
M0DU20 |
1-617 |
nD4 |
431-535 |
105 |
e5ijiA1 |
5IJI |
601.4.1 |
0.919 |
0.0 |
0.0 |
11.2|11.2|1 |
0.927 |
0.729 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
4 |
0 |
no |
no |
PF16587 |
B8DLZ3 |
45-120 |
nD1 |
46-120 |
75 |
e3ci0K3 |
3CI0 |
274.1.1 |
0.854 |
0.0 |
0.0 |
3.8|3.8|1 |
0.665 |
0.61 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
1 |
4 |
yes:out |
no |
PF16587 |
E1VC04 |
44-134 |
nD1 |
56-135 |
80 |
e5wxkB1 |
5WXK |
4.1.1 |
0.916 |
0.0 |
0.0 |
3.2|3.4|0 |
0.9 |
1.0 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
5 |
yes:out |
no |
PF16587 |
A0A127QMY0 |
10-97 |
nD1 |
6-95 |
90 |
e6utuC2 |
6UTU |
274.1.1 |
0.942 |
0.0 |
0.0 |
6.0|6.1|1 |
0.813 |
0.732 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
2 |
5 |
no |
no |
PF16711 |
A0A7I4CH18 |
24-69 |
nD2 |
46-195 |
150 |
e4djgA1 |
4DJG |
605.4.1 |
0.882 |
0.998 |
0.997 |
0.0|6.4|0 |
1.0 |
2.19 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
ROP protein |
ROP protein |
2 |
0 |
no |
no |
PF16769 |
O60318 |
1262-1976 |
nD9 |
1566-1630,1651-1670,1766-1800 |
120 |
e4r7yA5 |
4R7Y |
148.1.3 |
0.882 |
0.0 |
0.0 |
4.0|4.9|0 |
0.883 |
1.29 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
2 |
no |
no |
PF16769 |
A0A0G2JV99 |
1259-1971 |
nD8 |
1561-1630,1646-1800 |
225 |
e6bfiB5 |
6BFI |
601.1.1 |
0.904 |
0.0 |
0.0 |
4.7|4.7|1 |
0.722 |
1.718 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
8 |
2 |
no |
no |
PF16873 |
A0A373WML3 |
1-393 |
nD3 |
273-350,366-404 |
117 |
e4hkhA1 |
4HKH |
1.1.5 |
0.912 |
0.0 |
0.0 |
3.4|3.4|1 |
0.541 |
0.69 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel |
3 |
6 |
no |
no |
PF16883 |
A0A292DFU5 |
4-194 |
nD1 |
1-195 |
195 |
e1h6kC3 |
1H6K |
109.4.1 |
0.86 |
0.0 |
0.0 |
7.3|7.3|1 |
0.594 |
0.682 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
yes:6 |
PF16887 |
A0A1G9RSC3 |
6-232 |
nD1 |
6-230 |
225 |
e5dlbA1 |
5DLB |
3844.2.1 |
0.925 |
0.933 |
0.959 |
11.8|11.8|1 |
0.717 |
0.811 |
pymol |
more |
good_domain |
a+b two layers |
MybT EspG5 chaperone |
MybT EspG5 chaperone |
MybT EspG5 chaperone |
6 |
11 |
no |
no |
PF16927 |
A0A2D6F3F4 |
8-220 |
nD1 |
1-220 |
220 |
e7c86A1 |
7C86 |
5001.1.1 |
0.946 |
0.215 |
0.307 |
8.3|14.9|1 |
0.789 |
0.771 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
3 |
no |
yes:7 |
PF16931 |
Q9I549 |
1-120 |
nD1 |
6-100 |
95 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.933 |
0.0 |
0.0 |
6.2|6.2|1 |
0.925 |
0.995 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
4 |
0 |
no |
yes:3 |
PF16936 |
A0A0J6W598 |
1-78 |
nD1 |
1-79 |
79 |
e5j5lA1 |
5J5L |
622.1.1 |
0.926 |
0.0 |
0.0 |
5.9|5.9|1 |
0.916 |
0.898 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
3 |
0 |
yes:in |
yes:2 |
PF16939 |
M6ZKB9 |
2-257 |
nD1 |
1-30,61-260 |
230 |
e2vdfA1 |
2VDF |
5084.2.1 |
0.923 |
0.965 |
0.999 |
13.4|19.3|1 |
0.757 |
0.79 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPT-like |
OMPT-like |
1 |
10 |
no |
no |
PF16944 |
A0A1Y1Y3P1 |
19-253 |
nD1 |
31-250 |
220 |
e4p1nB1 |
4P1N |
604.12.1 |
0.944 |
0.0 |
0.0 |
4.6|4.8|0 |
0.91 |
2.543 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
6 |
1 |
no |
yes:3 |
PF16946 |
H8P163 |
123-427 |
nD1 |
136-425 |
290 |
e6z34A1 |
6Z34 |
5084.5.4 |
0.949 |
0.962 |
0.977 |
16.5|22.3|1 |
0.887 |
0.69 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
1 |
14 |
yes:out |
no |
PF16954 |
Q5ZHU0 |
7-65 |
nD1 |
6-140 |
135 |
e1sumB3 |
1SUM |
604.5.1 |
0.944 |
0.0 |
0.0 |
8.7|10.3|1 |
0.945 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:4 |
PF16954 |
A0A7E4VF29 |
70-124 |
nD1 |
6-150 |
145 |
e3l39A1 |
3L39 |
604.5.1 |
0.908 |
0.0 |
0.0 |
8.6|8.6|1 |
0.594 |
1.343 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:4 |
PF16954 |
A0A1S3DDL8 |
70-121 |
nD1 |
1-135 |
135 |
e3l39A1 |
3L39 |
604.5.1 |
0.914 |
0.0 |
0.0 |
9.1|9.1|1 |
0.606 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:4 |
PF16964 |
C4K3C9 |
9-213 |
nD2 |
46-210 |
165 |
e5g24A1 |
5G24 |
274.1.1 |
0.903 |
0.833 |
0.0 |
3.8|5.9|0 |
0.651 |
1.341 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
3 |
4 |
yes:out |
no |
PF16964 |
Q5E0Z8 |
3-179 |
nD1 |
16-179 |
164 |
e5g24A1 |
5G24 |
274.1.1 |
0.946 |
0.899 |
0.647 |
5.1|6.6|0 |
0.781 |
1.333 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
5 |
4 |
no |
yes:1 |
PF16966 |
H2IYI1 |
99-464 |
nD2 |
96-464 |
369 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.942 |
0.973 |
0.986 |
23.7|23.7|1 |
0.887 |
1.003 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
19 |
yes:out |
no |
PF16966 |
Q8ZMK7 |
92-456 |
nD2 |
81-455 |
375 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.94 |
0.972 |
0.986 |
23.8|24.0|1 |
0.892 |
1.019 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
19 |
yes:out |
no |
PF16966 |
E1V3J8 |
35-377 |
nD1 |
21-375 |
355 |
e4rjwA1 |
4RJW |
5084.5.1 |
0.949 |
0.987 |
0.997 |
24.6|24.6|1 |
0.901 |
0.965 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
0 |
18 |
yes:out |
no |
PF16972 |
Q29D71 |
1-455 |
nD2 |
46-95,221-275 |
105 |
e2yv5A1 |
2YV5 |
2.1.1 |
0.904 |
0.0 |
0.0 |
4.6|4.6|1 |
0.821 |
1.01 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
5 |
no |
yes:out |
PF16976 |
R6TVE0 |
107-213 |
nD2 |
101-230 |
130 |
e1kzlA2 |
1KZL |
1.1.7 |
0.939 |
0.0 |
0.0 |
3.5|4.4|1 |
0.792 |
1.171 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Alanine racemase-C |
3 |
6 |
yes:out |
no |
PF16976 |
R7XWH8 |
115-231 |
nD2 |
116-235 |
120 |
e5o60D1 |
5O60 |
1.1.7 |
0.949 |
0.0 |
0.0 |
5.3|5.3|1 |
0.729 |
1.081 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Alanine racemase-C |
2 |
7 |
yes:out |
no |
PF16995 |
B2HR11 |
16-230 |
nD2 |
146-230 |
85 |
e4j7cJ4 |
4J7C |
5054.1.1 |
0.928 |
0.0 |
0.0 |
6.2|7.1|1 |
0.841 |
0.373 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
3 |
1 |
no |
yes:2 |
PF16995 |
E9T803 |
28-237 |
nD2 |
151-240 |
90 |
e7ej1D3 |
7EJ1 |
5054.1.1 |
0.93 |
0.0 |
0.225 |
6.7|6.7|1 |
0.812 |
0.395 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
3 |
0 |
no |
yes:2 |
PF16995 |
A0A4Y4D861 |
8-218 |
nD1 |
6-225 |
220 |
e3ukmD1 |
3UKM |
5054.1.1 |
0.897 |
0.0 |
0.0 |
5.9|7.6|1 |
0.515 |
0.965 |
pymol |
more |
good_domain |
alpha complex topology |
Voltage-gated ion channels |
Voltage-gated ion channels |
Voltage-gated ion channels |
8 |
1 |
yes:in |
yes:5 |
PF17000 |
A0A414CN66 |
4-70 |
nD1 |
1-70 |
70 |
e5awwG1 |
5AWW |
3660.1.1 |
0.871 |
0.976 |
0.974 |
5.7|6.2|0 |
0.92 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
Protein-export membrane protein secG |
Protein-export membrane protein secG |
Protein-export membrane protein secG |
2 |
0 |
yes:in |
yes:1 |
PF17006 |
S7WBX3 |
161-435 |
nD3 |
156-435 |
280 |
e3lkuE2 |
3LKU |
109.4.1 |
0.909 |
0.0 |
0.143 |
7.2|8.1|1 |
0.627 |
0.979 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF17011 |
A0A059F548 |
6-127 |
nD1 |
1-85 |
85 |
e2rdeA1 |
2RDE |
1.1.5 |
0.859 |
0.0 |
0.0 |
4.1|4.1|1 |
0.679 |
0.501 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
FMN-binding split barrel |
1 |
7 |
no |
no |
PF17011 |
T0MFN6 |
2-112 |
nD1 |
1-80 |
80 |
e5cj9A1 |
5CJ9 |
306.2.1 |
0.884 |
0.0 |
0.0 |
4.7|5.1|1 |
0.811 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Glucose permease domain IIB-like |
arginine repressor C terminal domain-related |
C-terminal domain of arginine repressor |
1 |
8 |
no |
no |
PF17012 |
L2GVC9 |
4-149 |
nD1 |
1-120 |
120 |
e4u13A1 |
4U13 |
243.1.1 |
0.883 |
0.172 |
0.228 |
6.5|8.8|1 |
0.836 |
0.902 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
NTF2-like |
NTF2-like |
4 |
6 |
no |
no |
PF17012 |
I3ERX7 |
9-153 |
nD1 |
6-125 |
120 |
e1tuhA1 |
1TUH |
243.1.1 |
0.949 |
0.673 |
0.879 |
7.3|9.0|1 |
0.797 |
0.902 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
NTF2-like |
NTF2-like |
4 |
8 |
no |
no |
PF17017 |
I3EH28 |
25-197 |
nD2 |
121-250 |
130 |
e4mtdD1 |
4MTD |
101.1.2 |
0.884 |
0.0 |
0.0 |
2.9|2.9|1 |
0.72 |
1.368 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
7 |
no |
yes:out |
PF17018 |
J9DKY7 |
25-217 |
nD1 |
21-220 |
200 |
e2rjqA1 |
2RJQ |
2498.1.1 |
0.947 |
0.285 |
0.0 |
10.3|10.4|1 |
0.823 |
0.797 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
6 |
6 |
no |
no |
PF17026 |
A0A0F9YVC3 |
15-117 |
nD1 |
16-50 |
35 |
e3vpbF1 |
3VPB |
375.1.1 |
0.921 |
0.824 |
0.913 |
0.0|0.0|1 |
0.661 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
yes:out |
PF17026 |
C4V895 |
15-117 |
nD1 |
11-50 |
40 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.891 |
0.87 |
0.912 |
0.0|0.0|1 |
0.633 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
yes:out |
PF17032 |
L2GXH3 |
25-97 |
nD1 |
11-100 |
90 |
e3ul5D1 |
3UL5 |
243.3.1 |
0.875 |
0.0 |
0.0 |
2.5|2.5|1 |
0.405 |
0.9 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
0 |
6 |
no |
no |
PF17038 |
A9CZ25 |
49-222 |
nD1 |
41-215 |
175 |
e5xmgA1 |
5XMG |
881.1.1 |
0.922 |
0.0 |
0.0 |
4.3|5.7|1 |
0.836 |
1.064 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
4 |
9 |
yes:out |
no |
PF17044 |
W0FVU7 |
28-201 |
nD1 |
26-200 |
175 |
e2g30A1 |
2G30 |
11.1.1 |
0.923 |
0.0 |
0.319 |
4.9|6.9|1 |
0.876 |
1.62 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
10 |
yes:in |
no |
PF17068 |
C5DU00 |
9-276 |
nD1 |
72-145,168-280 |
187 |
e1g2rA1 |
1G2R |
377.4.1 |
0.929 |
0.892 |
0.913 |
4.7|4.7|1 |
0.798 |
1.989 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
YlxR-like |
YlxR-like |
7 |
8 |
no |
no |
PF17068 |
Q75EJ1 |
8-286 |
nD1 |
73-148,172-288 |
193 |
e1g2rA1 |
1G2R |
377.4.1 |
0.909 |
0.92 |
0.931 |
4.9|4.9|1 |
0.755 |
2.053 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
YlxR-like |
YlxR-like |
7 |
8 |
no |
no |
PF17068 |
A0A1G4K2Y4 |
23-273 |
nD1 |
71-149,171-275 |
184 |
e1g2rA1 |
1G2R |
377.4.1 |
0.936 |
0.897 |
0.925 |
4.0|4.0|1 |
0.809 |
1.957 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
YlxR-like |
YlxR-like |
7 |
8 |
no |
no |
PF17100 |
M7TVM0 |
84-318 |
nD1 |
81-110,146-165,171-325,331-360 |
235 |
e4avmA1 |
4AVM |
4177.1.1 |
0.875 |
0.0 |
0.0 |
8.8|10.2|1 |
0.531 |
0.942 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
BAR/IMD domain-like |
BAR/IMD domain-like |
BAR/IMD domain-like |
8 |
0 |
no |
no |
PF17109 |
A0A1C1CM20 |
25-142 |
nD1 |
6-180 |
175 |
e5cwoB1 |
5CWO |
109.3.1 |
0.888 |
0.0 |
0.0 |
7.2|8.5|1 |
0.651 |
0.879 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
0 |
no |
no |
PF17110 |
A1CG17 |
89-254 |
nD1 |
36-200,236-265 |
195 |
e4u1dA1 |
4U1D |
109.4.1 |
0.871 |
0.0 |
0.0 |
8.3|8.3|1 |
0.567 |
0.682 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
1 |
no |
no |
PF17110 |
B8NJ21 |
85-246 |
nD1 |
31-200,231-250 |
190 |
e4u1dA1 |
4U1D |
109.4.1 |
0.87 |
0.0 |
0.0 |
8.3|8.3|1 |
0.562 |
0.664 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
1 |
no |
no |
PF17111 |
H1V075 |
38-247 |
nD1 |
46-215,226-310,316-345 |
285 |
e4btfA1 |
4BTF |
611.7.1 |
0.934 |
0.913 |
0.9 |
8.8|9.0|0 |
0.735 |
1.748 |
pymol |
more |
good_domain |
alpha bundles |
N-cbl like |
Mixed lineage kinase domain-like (MLKL) N-terminal domain |
Mixed lineage kinase domain-like (MLKL) N-terminal domain |
9 |
2 |
no |
no |
PF17150 |
K9RDC9 |
144-233 |
nD1 |
11-190 |
180 |
e1xdoB3 |
1XDO |
300.1.1 |
0.924 |
0.0 |
0.0 |
9.4|9.5|1 |
0.846 |
0.96 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
4 |
7 |
no |
no |
PF17150 |
B8HRM7 |
139-217 |
nD1 |
6-190 |
185 |
e3qphA1 |
3QPH |
300.1.1 |
0.901 |
0.0 |
0.0 |
8.7|8.7|1 |
0.857 |
0.987 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
5 |
7 |
no |
no |
PF17156 |
A0A0H2UY84 |
26-229 |
nD2 |
36-170 |
135 |
e2hjeA1 |
2HJE |
223.1.1 |
0.939 |
0.0 |
0.0 |
6.1|6.5|1 |
0.667 |
0.925 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
4 |
5 |
yes:out |
yes:out |
PF17157 |
P13518 |
33-130 |
nD1 |
6-130,136-160 |
150 |
e4u65A1 |
4U65 |
223.8.1 |
0.916 |
0.728 |
0.829 |
8.3|8.5|0 |
0.708 |
1.158 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
LapD periplasmic domain |
LapD periplasmic domain |
3 |
4 |
no |
yes:2 |
PF17157 |
Q32B88 |
33-130 |
nD1 |
6-135 |
130 |
e4u65A1 |
4U65 |
223.8.1 |
0.89 |
0.537 |
0.845 |
7.7|8.7|0 |
0.77 |
1.004 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
LapD periplasmic domain |
LapD periplasmic domain |
2 |
4 |
no |
yes:2 |
PF17158 |
A0A074LP53 |
43-276 |
nD2 |
41-285 |
245 |
e6ak3A1 |
6AK3 |
5001.1.1 |
0.872 |
0.0 |
0.0 |
10.2|10.3|1 |
0.79 |
0.858 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
2 |
no |
yes:7 |
PF17158 |
A0A4R2L1G0 |
41-275 |
nD2 |
36-265 |
230 |
e7d7qA1 |
7D7Q |
5001.1.1 |
0.897 |
0.423 |
0.0 |
6.1|9.7|1 |
0.694 |
0.806 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
3 |
yes:out |
yes:7 |
PF17158 |
A0A329BMX3 |
42-276 |
nD2 |
41-260 |
220 |
e5uz7R1 |
5UZ7 |
5001.1.1 |
0.897 |
0.21 |
0.0 |
7.0|12.0|1 |
0.634 |
0.771 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
2 |
yes:out |
yes:7 |
PF17159 |
D7EB64 |
35-271 |
nD1 |
21-270 |
250 |
e7e2xR1 |
7E2X |
5001.1.1 |
0.945 |
0.587 |
0.0 |
10.2|12.4|1 |
0.774 |
0.876 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
1 |
no |
yes:8 |
PF17161 |
A0A553EAH1 |
361-477 |
nD2 |
151-480 |
330 |
e7dmkA2 |
7DMK |
207.2.1 |
0.85 |
0.998 |
0.997 |
24.6|24.6|1 |
0.894 |
0.868 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
3 |
22 |
yes:out |
no |
PF17161 |
A0A0D0IV37 |
342-464 |
nD2 |
131-465 |
335 |
e3t9gA1 |
3T9G |
207.2.1 |
0.88 |
0.0 |
0.998 |
13.9|24.8|1 |
0.967 |
0.882 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
3 |
23 |
yes:out |
no |
PF17163 |
R6U353 |
127-310 |
nD3 |
231-300 |
70 |
e7acjA1 |
7ACJ |
325.1.8 |
0.935 |
0.0 |
0.0 |
3.2|3.2|1 |
0.731 |
0.927 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Ribosomal L27 protein |
0 |
6 |
yes:out |
no |
PF17164 |
A0A6N8J8D9 |
335-370 |
nD2 |
116-310,326-520 |
390 |
e3dsmA1 |
3DSM |
5.1.4 |
0.915 |
0.967 |
0.989 |
18.1|23.7|1 |
0.451 |
1.086 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
26 |
yes:out |
no |
PF17164 |
A0A544Z9L5 |
135-166 |
nD1 |
21-380 |
360 |
e6wnxA2 |
6WNX |
5.1.4 |
0.943 |
0.0 |
0.951 |
28.3|29.5|1 |
0.93 |
1.003 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
22 |
no |
no |
PF17164 |
A0A0M8VT16 |
4-34 |
nD1 |
1-80 |
80 |
e2m3xB1 |
2M3X |
5.1.10 |
0.876 |
0.0 |
0.0 |
4.4|8.6|0 |
0.778 |
1.111 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
0 |
6 |
no |
no |
PF17180 |
E2JA35 |
13-77 |
nD1 |
16-79 |
64 |
e7odt11 |
7ODT |
375.1.1 |
0.855 |
0.0 |
0.895 |
2.3|2.3|1 |
0.746 |
1.143 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF17180 |
A0A0D3QJ50 |
13-77 |
nD1 |
16-79 |
64 |
e7odt11 |
7ODT |
375.1.1 |
0.855 |
0.0 |
0.89 |
2.3|2.3|1 |
0.746 |
1.143 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF17198 |
F5YV58 |
98-329 |
nD1 |
66-330 |
265 |
e4xu5A1 |
4XU5 |
1015.1.1 |
0.93 |
0.523 |
0.231 |
6.0|6.0|1 |
0.674 |
1.373 |
pymol |
more |
good_domain |
alpha complex topology |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
Insulin-induced gene (Insig) homologs |
8 |
7 |
no |
yes:7 |
PF17231 |
R6Z1V3 |
128-346 |
nD3 |
276-350 |
75 |
e1t47A7 |
1T47 |
211.1.1 |
0.904 |
0.0 |
0.0 |
4.0|4.3|1 |
0.851 |
1.103 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
5 |
no |
yes:out |
PF17231 |
A0A662UPB4 |
132-327 |
nD3 |
256-330 |
75 |
e3gm5A4 |
3GM5 |
211.1.1 |
0.901 |
0.0 |
0.0 |
4.5|5.6|0 |
0.835 |
1.103 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
3 |
5 |
no |
yes:out |
PF17234 |
C5E373 |
104-260 |
nD2 |
216-275 |
60 |
e3nm7A1 |
3NM7 |
295.1.1 |
0.93 |
0.0 |
0.0 |
5.7|6.1|0 |
0.716 |
0.492 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
1 |
4 |
no |
no |
PF17235 |
G8ZP64 |
107-316 |
nD1 |
181-320,411-430 |
160 |
e2ncoA1 |
2NCO |
108.1.1 |
0.899 |
0.0 |
0.0 |
4.3|4.9|0 |
0.863 |
1.798 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
4 |
no |
no |
PF17239 |
H7ELM5 |
5-558 |
nD4 |
371-565 |
195 |
e6n63A1 |
6N63 |
150.1.1 |
0.924 |
0.0 |
0.0 |
9.4|9.4|1 |
0.851 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
5 |
0 |
no |
no |
PF17239 |
Q73IZ3 |
5-558 |
nD3 |
376-565 |
190 |
e6n63A1 |
6N63 |
150.1.1 |
0.911 |
0.0 |
0.0 |
8.1|8.1|1 |
0.801 |
1.173 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
5 |
0 |
no |
no |
PF17239 |
F5Y7F4 |
6-558 |
nD2 |
106-140,201-320 |
155 |
e6n63A1 |
6N63 |
150.1.1 |
0.914 |
0.0 |
0.0 |
5.5|5.5|1 |
0.844 |
0.957 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
7 |
3 |
no |
yes:out |
PF17239 |
F5Y7F4 |
6-558 |
nD4 |
391-465,486-565 |
155 |
e6n63A1 |
6N63 |
150.1.1 |
0.925 |
0.0 |
0.0 |
9.3|9.3|1 |
0.887 |
0.957 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
4 |
0 |
no |
yes:1 |
PF17240 |
A0QPW0 |
8-130 |
nD1 |
11-110 |
100 |
e2q0oD1 |
2Q0O |
192.12.1 |
0.925 |
0.0 |
0.0 |
3.7|3.7|1 |
0.907 |
1.124 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Transcriptional repressor TraM |
Transcriptional repressor TraM |
4 |
0 |
no |
yes:2 |
PF17240 |
A0A1M6SZM1 |
2-120 |
nD1 |
6-105 |
100 |
e6m0sD1 |
6M0S |
5041.1.1 |
0.918 |
0.0 |
0.0 |
4.4|4.9|0 |
0.985 |
1.282 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
4 |
0 |
no |
yes:2 |
PF17247 |
H3SPB4 |
24-97 |
nD1 |
1-98 |
98 |
e5csdD1 |
5CSD |
622.1.1 |
0.921 |
0.0 |
0.0 |
6.8|7.1|1 |
0.93 |
1.114 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
3 |
0 |
no |
yes:3 |
PF17268 |
G1UWP5 |
23-92 |
nD1 |
26-90 |
65 |
e1bkbA2 |
1BKB |
4.1.1 |
0.923 |
0.0 |
0.869 |
4.7|4.7|1 |
0.829 |
0.812 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
0 |
5 |
yes:out |
no |
PF17268 |
A0A2S5J2S6 |
8-76 |
nD1 |
11-75 |
65 |
e6b9mA2 |
6B9M |
4.1.1 |
0.916 |
0.638 |
0.761 |
4.5|5.0|1 |
0.82 |
0.812 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
0 |
5 |
no |
no |
PF17269 |
B4RI04 |
4-113 |
nD1 |
11-105 |
95 |
e1njhA1 |
1NJH |
3504.1.1 |
0.854 |
0.0 |
0.0 |
7.5|7.5|1 |
0.819 |
0.805 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
Hypothetical protein YojF |
Hypothetical protein YojF |
1 |
6 |
no |
no |
PF17269 |
A0A246U8N1 |
4-102 |
nD1 |
6-103 |
98 |
e1njhA1 |
1NJH |
3504.1.1 |
0.857 |
0.0 |
0.0 |
7.8|7.8|1 |
0.848 |
0.831 |
pymol |
more |
good_domain |
beta barrels |
MutM N-terminal domain-like |
Hypothetical protein YojF |
Hypothetical protein YojF |
1 |
7 |
no |
no |
PF17274 |
A4N5M5 |
2-69 |
nD1 |
1-65 |
65 |
e4uy3A2 |
4UY3 |
632.22.1 |
0.91 |
0.267 |
0.0 |
6.6|6.6|1 |
0.819 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
no |
PF17274 |
A4MXS4 |
2-69 |
nD1 |
1-65 |
65 |
e4uy3A2 |
4UY3 |
632.22.1 |
0.91 |
0.267 |
0.0 |
6.6|6.6|1 |
0.819 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
no |
PF17274 |
A4NW25 |
2-69 |
nD1 |
1-65 |
65 |
e4uy3A2 |
4UY3 |
632.22.1 |
0.91 |
0.274 |
0.0 |
6.6|6.6|1 |
0.819 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
3 |
0 |
no |
no |
PF17275 |
Q2JS86 |
1-71 |
nD1 |
6-70 |
65 |
e4b6xA1 |
4B6X |
192.1.1 |
0.903 |
0.0 |
0.0 |
6.1|6.1|1 |
0.842 |
0.903 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
GreA transcript cleavage protein, N-terminal domain |
GreA transcript cleavage protein, N-terminal domain |
1 |
2 |
no |
no |
PF17276 |
G8BQ85 |
68-229 |
nD1 |
28-105,181-210 |
108 |
e6s9vA2 |
6S9V |
12.1.1 |
0.863 |
0.0 |
0.0 |
2.0|2.0|1 |
0.667 |
1.2 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
2 |
6 |
no |
no |
PF17279 |
A0A5B0DIE3 |
2-86 |
nD1 |
6-100 |
95 |
e4wj1A1 |
4WJ1 |
150.7.1 |
0.873 |
0.958 |
0.294 |
6.8|7.9|0 |
0.948 |
1.118 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
PE |
PE |
2 |
0 |
no |
no |
PF17282 |
A0A0F7LR90 |
1-99 |
nD1 |
6-90 |
85 |
e6tc9A3 |
6TC9 |
102.2.1 |
0.919 |
0.712 |
0.804 |
3.7|3.9|1 |
0.701 |
0.924 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
H2TH |
H2TH |
4 |
0 |
no |
no |
PF17282 |
A0A0A8FIR9 |
10-111 |
nD1 |
16-105 |
90 |
e6fl1A2 |
6FL1 |
102.2.1 |
0.916 |
0.618 |
0.768 |
3.9|3.9|1 |
0.756 |
0.978 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
H2TH |
H2TH |
4 |
0 |
no |
no |
PF17282 |
A0A5B8I4W4 |
10-111 |
nD1 |
16-105 |
90 |
e3jr5A1 |
3JR5 |
102.2.1 |
0.924 |
0.585 |
0.768 |
4.0|4.4|1 |
0.746 |
0.978 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
H2TH |
H2TH |
4 |
0 |
no |
no |
PF17283 |
A7MTP2 |
120-160 |
nD2 |
111-165 |
55 |
e5fmfR2 |
5FMF |
375.1.1 |
0.916 |
0.893 |
0.934 |
2.4|3.5|1 |
0.786 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF17283 |
Q87LK4 |
120-161 |
nD2 |
111-165 |
55 |
e5fmfR2 |
5FMF |
375.1.1 |
0.906 |
0.87 |
0.931 |
2.3|3.4|1 |
0.738 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF17293 |
A0A3D1D5Y5 |
4-73 |
nD1 |
1-79 |
79 |
e3jtzA1 |
3JTZ |
252.2.1 |
0.934 |
0.0 |
0.0 |
5.0|5.0|1 |
0.771 |
1.145 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
GCC-box binding domain-like |
GCC-box binding domain-like |
1 |
3 |
no |
no |
PF17301 |
G7CCA4 |
35-139 |
nD1 |
48-139 |
92 |
e3c1dB1 |
3C1D |
101.35.1 |
0.944 |
0.0 |
0.0 |
2.3|3.0|0 |
0.947 |
1.917 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
2 |
yes:out |
no |
PF17301 |
A1UKR9 |
38-149 |
nD1 |
61-149 |
89 |
e3c1dB1 |
3C1D |
101.35.1 |
0.944 |
0.0 |
0.0 |
2.1|2.9|0 |
0.945 |
1.854 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
1 |
yes:out |
no |
PF17302 |
A0A2M8TUX5 |
14-44 |
nD1 |
1-53 |
53 |
e4mo1A1 |
4MO1 |
361.1.1 |
0.884 |
0.964 |
0.978 |
0.0|0.0|0 |
0.895 |
0.752 |
pymol |
more |
good_domain |
few secondary structure elements |
DnaJ/Hsp40 cysteine-rich domain |
DnaJ/Hsp40 cysteine-rich domain |
DnaJ/Hsp40 cysteine-rich domain |
0 |
4 |
no |
no |
PF17310 |
A0A1Z3HT61 |
3-323 |
nD1 |
21-170 |
150 |
e4di0B2 |
4DI0 |
150.1.1 |
0.855 |
0.0 |
0.0 |
7.9|7.9|1 |
0.386 |
0.926 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
5 |
1 |
no |
yes:5 |
PF17310 |
A0A1Z3HT61 |
3-323 |
nD2 |
171-330 |
160 |
e6qviA1 |
6QVI |
274.1.1 |
0.948 |
0.0 |
0.0 |
4.9|4.9|1 |
0.855 |
1.301 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
3 |
7 |
no |
yes:out |
PF17311 |
Q9CLX6 |
26-184 |
nD1 |
31-140 |
110 |
e3utkB1 |
3UTK |
3705.1.1 |
0.866 |
0.68 |
0.0 |
2.1|2.9|0 |
0.67 |
1.183 |
pymol |
more |
good_domain |
alpha arrays |
Bacterial chaperone lipoprotein (PulS_OutS) |
Bacterial chaperone lipoprotein (PulS_OutS) |
Bacterial chaperone lipoprotein (PulS_OutS) |
3 |
0 |
yes:out |
no |
PF17312 |
A5Z649 |
86-382 |
nD2 |
76-388 |
313 |
e3mbrX1 |
3MBR |
5.1.4 |
0.938 |
0.0 |
0.216 |
15.8|24.0|0 |
0.929 |
0.872 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
22 |
yes:out |
no |
PF17312 |
A0A0R1YL09 |
7-316 |
nD1 |
1-323 |
323 |
e3mbrX1 |
3MBR |
5.1.4 |
0.857 |
0.0 |
0.441 |
14.5|23.7|0 |
0.927 |
0.9 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
6 |
21 |
no |
no |
PF17312 |
A0A1S6QJF4 |
14-317 |
nD1 |
6-320 |
315 |
e3qqzA1 |
3QQZ |
5.1.3 |
0.91 |
0.0 |
0.153 |
15.4|23.6|0 |
0.914 |
0.91 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
5 |
22 |
no |
no |
PF17321 |
P25591 |
6-422 |
nD1 |
6-40,46-80,86-110 |
95 |
e3opcB1 |
3OPC |
603.5.1 |
0.879 |
0.569 |
0.0 |
0.0|7.6|0 |
0.453 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
FlgN-like |
FlgN-like |
3 |
0 |
no |
no |
PF17323 |
A0A7Y3ZUI9 |
21-169 |
nD1 |
26-170 |
145 |
e4u3qB1 |
4U3Q |
9.1.1 |
0.902 |
0.724 |
0.799 |
8.5|12.1|1 |
0.686 |
0.948 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
2 |
9 |
yes:out |
no |
PF17323 |
D0X3Q2 |
1-142 |
nD1 |
1-144 |
144 |
e4u3qB1 |
4U3Q |
9.1.1 |
0.871 |
0.75 |
0.814 |
7.9|12.4|1 |
0.678 |
0.941 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
1 |
8 |
no |
no |
PF17323 |
A0A2M8GVY6 |
22-172 |
nD1 |
26-175 |
150 |
e4u3qB1 |
4U3Q |
9.1.1 |
0.922 |
0.732 |
0.799 |
8.3|11.9|1 |
0.702 |
0.98 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
8 |
no |
yes:out |
PF17330 |
C5DFD2 |
26-120 |
nD1 |
1-129 |
129 |
e5b7jA1 |
5B7J |
101.1.1 |
0.914 |
0.0 |
0.0 |
4.6|4.9|0 |
0.836 |
1.767 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
6 |
0 |
yes:in |
no |
PF17330 |
G8ZUS9 |
26-123 |
nD1 |
1-125 |
125 |
e1ofcX3 |
1OFC |
101.1.1 |
0.901 |
0.0 |
0.0 |
4.2|5.1|0 |
0.817 |
1.712 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
yes:in |
no |
PF17330 |
A0A0N7MKS2 |
26-120 |
nD1 |
1-129 |
129 |
e5b7jA1 |
5B7J |
101.1.1 |
0.915 |
0.0 |
0.0 |
4.3|4.9|0 |
0.836 |
1.767 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
6 |
0 |
yes:in |
no |
PF17334 |
A0A075JLN9 |
1-82 |
nD1 |
6-80 |
75 |
e5j4aB1 |
5J4A |
618.2.1 |
0.878 |
0.447 |
0.234 |
5.8|5.8|1 |
0.654 |
0.721 |
pymol |
more |
good_domain |
a+b complex topology |
DNA mimic protein DMP12-like |
Immunity protein CdiI |
Immunity protein CdiI |
4 |
0 |
no |
no |
PF17336 |
A0A357IAF8 |
1-110 |
nD1 |
6-110 |
105 |
e7blzK1 |
7BLZ |
5063.1.1 |
0.927 |
0.0 |
0.0 |
5.2|5.2|1 |
0.962 |
1.346 |
pymol |
more |
good_domain |
alpha bundles |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
Photosystem I reaction center subunit X, PsaK |
4 |
0 |
no |
yes:3 |
PF17337 |
S0AXG2 |
48-288 |
nD1 |
76-288 |
213 |
e7kbkB2 |
7KBK |
6.1.1 |
0.949 |
0.247 |
0.388 |
13.3|13.8|1 |
0.957 |
1.42 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-Trefoil |
beta-Trefoil |
beta-Trefoil |
2 |
11 |
yes:out |
no |
PF17337 |
Q03077 |
48-288 |
nD1 |
66-195,226-288 |
193 |
e3c9zA2 |
3C9Z |
6.1.1 |
0.946 |
0.0 |
0.407 |
13.6|13.6|1 |
0.983 |
1.287 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-Trefoil |
beta-Trefoil |
beta-Trefoil |
2 |
10 |
yes:out |
no |
PF17340 |
A0A150L8V4 |
4-65 |
nD1 |
6-65 |
60 |
e5xogM1 |
5XOG |
375.1.1 |
0.944 |
0.0 |
0.0 |
5.3|6.3|0 |
0.819 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF17340 |
A0A133KPL0 |
10-71 |
nD1 |
11-70 |
60 |
e5xogM1 |
5XOG |
375.1.1 |
0.946 |
0.0 |
0.0 |
5.1|6.3|0 |
0.841 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF17344 |
A0A4R1KYW5 |
49-86 |
nD1 |
26-88 |
63 |
e3ci0I1 |
3CI0 |
274.1.1 |
0.941 |
0.356 |
0.515 |
5.8|6.0|1 |
0.827 |
0.512 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
1 |
4 |
yes:out |
no |
PF17344 |
Q4QLW7 |
49-88 |
nD1 |
26-90 |
65 |
e5bw0F1 |
5BW0 |
274.1.1 |
0.939 |
0.297 |
0.504 |
6.6|7.1|1 |
0.798 |
0.528 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
1 |
4 |
yes:out |
no |
PF17345 |
D4GKP7 |
2-107 |
nD1 |
6-100 |
95 |
e2dmeA1 |
2DME |
103.4.1 |
0.947 |
0.0 |
0.0 |
4.9|4.9|1 |
0.779 |
0.979 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
3 |
2 |
no |
no |
PF17346 |
A0A7T4FPN8 |
1-122 |
nD1 |
1-135 |
135 |
e3k44C1 |
3K44 |
295.1.1 |
0.851 |
0.0 |
0.0 |
4.1|5.3|1 |
0.735 |
1.107 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
8 |
no |
no |
PF17353 |
A0A1L3MMD9 |
15-165 |
nD1 |
1-75 |
75 |
e1z0pA1 |
1Z0P |
192.16.1 |
0.878 |
0.0 |
0.0 |
7.1|7.1|1 |
0.849 |
0.974 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
SPy1572-like |
SPy1572-like |
2 |
2 |
no |
yes:2 |
PF17359 |
A0A7D7Y5G8 |
1-216 |
nD2 |
46-75,116-175 |
90 |
e6i1mA1 |
6I1M |
243.3.1 |
0.934 |
0.0 |
0.0 |
5.8|5.8|1 |
0.837 |
0.9 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
4 |
no |
yes:out |
PF17359 |
J3T900 |
1-216 |
nD2 |
46-75,116-170 |
85 |
e2bo9D2 |
2BO9 |
243.3.1 |
0.899 |
0.0 |
0.0 |
4.8|4.8|1 |
0.755 |
0.85 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
no |
yes:out |
PF17359 |
Q7NBY2 |
1-216 |
nD3 |
46-75,116-170 |
85 |
e6i1mA1 |
6I1M |
243.3.1 |
0.929 |
0.0 |
0.0 |
5.0|6.4|1 |
0.837 |
0.85 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
4 |
no |
yes:out |
PF17362 |
A0A0F4KN55 |
14-92 |
nD1 |
16-85 |
70 |
e7nkyZ2 |
7NKY |
4.1.1 |
0.904 |
0.0 |
0.0 |
3.8|3.8|1 |
0.836 |
0.875 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
6 |
no |
no |
PF17367 |
Q57948 |
5-98 |
nD1 |
6-95 |
90 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.937 |
0.0 |
0.0 |
5.9|5.9|1 |
0.884 |
0.942 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
3 |
1 |
no |
yes:3 |
PF17368 |
Q9KB63 |
1-85 |
nD1 |
1-75 |
75 |
e5kbpA2 |
5KBP |
632.1.1 |
0.89 |
0.0 |
0.0 |
7.7|7.7|1 |
0.778 |
0.667 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Families 57/38 glycoside transferase middle domain |
Families 57/38 glycoside transferase middle domain |
3 |
0 |
no |
yes:2 |
PF17371 |
A4HNY4 |
102-767 |
nD2 |
101-160,306-490 |
245 |
e4jeuB1 |
4JEU |
603.1.1 |
0.908 |
0.0 |
0.0 |
6.2|6.8|0 |
0.789 |
2.333 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
7 |
1 |
no |
no |
PF17371 |
A4ICL0 |
102-767 |
nD1 |
21-60,96-160,306-340,366-490 |
265 |
e4jeuB1 |
4JEU |
603.1.1 |
0.87 |
0.0 |
0.0 |
5.9|6.7|0 |
0.642 |
2.524 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
9 |
3 |
no |
no |
PF17371 |
Q4Q1V2 |
101-766 |
nD1 |
21-50,96-160,306-485 |
275 |
e4y21A1 |
4Y21 |
109.4.1 |
0.917 |
0.0 |
0.0 |
5.3|6.5|1 |
0.469 |
0.962 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
3 |
no |
no |
PF17379 |
F0T853 |
7-106 |
nD1 |
1-109 |
109 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.904 |
0.0 |
0.0 |
11.8|11.8|1 |
0.843 |
0.661 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
3 |
0 |
no |
yes:4 |
PF17379 |
F6D216 |
7-105 |
nD1 |
1-105 |
105 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.902 |
0.0 |
0.0 |
11.2|11.2|1 |
0.826 |
0.636 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
3 |
0 |
no |
yes:4 |
PF17380 |
P46504 |
22-749 |
nD2 |
291-385,401-455,496-615 |
270 |
e6fkfp1 |
6FKF |
5046.1.1 |
0.949 |
0.0 |
0.0 |
6.4|6.4|1 |
0.972 |
1.736 |
pymol |
more |
good_domain |
extended segments |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
F-type ATP synthase subunit b |
2 |
1 |
yes:out |
no |
PF17380 |
A0A261BFB9 |
4-732 |
nD4 |
366-430,476-600 |
190 |
e5aj4Ad1 |
5AJ4 |
3967.1.1 |
0.924 |
0.0 |
0.0 |
5.0|5.0|1 |
0.683 |
1.166 |
pymol |
more |
good_domain |
extended segments |
Mitoribosomal protein mS26 |
Mitoribosomal protein mS26 |
Mitoribosomal protein mS26 |
2 |
1 |
no |
no |
PF17380 |
A0A261BFB9 |
4-732 |
nD5 |
676-730 |
55 |
e2mfkA1 |
2MFK |
394.1.1 |
0.949 |
0.0 |
0.0 |
4.4|4.4|1 |
0.81 |
0.827 |
pymol |
more |
good_domain |
few secondary structure elements |
Invertebrate chitin-binding proteins |
Invertebrate chitin-binding proteins |
Invertebrate chitin-binding proteins |
0 |
6 |
no |
no |
PF17388 |
J2K2V2 |
1-110 |
nD1 |
6-105 |
100 |
e3fgxB1 |
3FGX |
3547.1.1 |
0.936 |
0.676 |
0.0 |
5.3|5.3|1 |
0.812 |
0.962 |
pymol |
more |
good_domain |
a+b two layers |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
uncharacterised protein rbstp2171 |
5 |
3 |
no |
no |
PF17388 |
A0A164HUM5 |
1-119 |
nD1 |
6-115 |
110 |
e2ob9A1 |
2OB9 |
6050.1.1 |
0.911 |
0.65 |
0.0 |
4.4|5.3|0 |
0.771 |
0.965 |
pymol |
more |
good_domain |
a+b two layers |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
Phage tail assembly chaperone |
5 |
3 |
no |
no |
PF17393 |
D3S8C4 |
1-119 |
nD1 |
6-105 |
100 |
e6o1yB2 |
6O1Y |
304.156.1 |
0.857 |
0.0 |
0.0 |
5.6|5.6|1 |
0.893 |
1.031 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
DNA translocase FtsK N-terminal domain |
DNA translocase FtsK N-terminal domain |
3 |
4 |
no |
no |
PF17393 |
Q59052 |
1-119 |
nD1 |
6-105 |
100 |
e6o1yB2 |
6O1Y |
304.156.1 |
0.857 |
0.0 |
0.0 |
5.6|5.6|1 |
0.893 |
1.031 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
DNA translocase FtsK N-terminal domain |
DNA translocase FtsK N-terminal domain |
3 |
4 |
no |
no |
PF17400 |
A0A125W8T1 |
3-108 |
nD1 |
11-105 |
95 |
e5wxkB1 |
5WXK |
4.1.1 |
0.883 |
0.0 |
0.146 |
2.9|2.9|1 |
0.808 |
1.188 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
2 |
5 |
no |
no |
PF17410 |
Q8IJ07 |
31-305 |
nD2 |
171-300 |
130 |
e2peqB1 |
2PEQ |
4085.1.1 |
0.857 |
0.0 |
0.0 |
5.5|5.7|1 |
0.898 |
1.204 |
pymol |
more |
good_domain |
alpha arrays |
RbcX-like |
RbcX-like |
RbcX-like |
5 |
0 |
yes:out |
yes:1 |
PF17410 |
Q8I2C6 |
31-301 |
nD1 |
186-265 |
80 |
e4gr2B1 |
4GR2 |
4085.1.1 |
0.895 |
0.0 |
0.0 |
4.6|4.6|1 |
0.657 |
0.741 |
pymol |
more |
good_domain |
alpha arrays |
RbcX-like |
RbcX-like |
RbcX-like |
4 |
1 |
no |
yes:2 |
PF17419 |
A0A212S2X9 |
196-319 |
nD2 |
186-235,261-275,301-330 |
95 |
e1wtyA1 |
1WTY |
601.7.1 |
0.912 |
0.0 |
0.0 |
5.5|6.9|1 |
0.753 |
0.674 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
4 |
1 |
no |
no |
PF17422 |
Q1RHT3 |
75-352 |
nD3 |
226-330 |
105 |
e4lgmA6 |
4LGM |
148.1.3 |
0.928 |
0.0 |
0.256 |
4.8|5.9|0 |
0.902 |
1.129 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
0 |
no |
no |
PF17424 |
R7MGV0 |
1-135 |
nD1 |
26-130 |
105 |
e1ihoB3 |
1IHO |
283.1.1 |
0.851 |
0.0 |
0.0 |
6.3|6.3|0 |
0.752 |
0.409 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
Creatinase/aminopeptidase |
Creatinase/aminopeptidase |
2 |
7 |
no |
yes:out |
PF17424 |
A0A7C6RRE6 |
1-132 |
nD1 |
26-130 |
105 |
e2opdA1 |
2OPD |
274.1.1 |
0.918 |
0.0 |
0.189 |
5.8|6.6|0 |
0.825 |
0.854 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
2 |
5 |
no |
yes:out |
PF17424 |
A0A356K3B5 |
1-135 |
nD1 |
26-130 |
105 |
e3ag6B3 |
3AG6 |
283.1.1 |
0.886 |
0.0 |
0.0 |
6.5|7.2|0 |
0.718 |
0.409 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
Creatinase/aminopeptidase |
Creatinase/aminopeptidase |
2 |
7 |
no |
yes:out |
PF17427 |
Q814F0 |
40-164 |
nD1 |
46-165 |
120 |
e5okiB3 |
5OKI |
2.1.1 |
0.923 |
0.0 |
0.413 |
2.9|2.9|1 |
0.812 |
1.154 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
6 |
no |
no |
PF17427 |
A0A7Y7UDS0 |
42-165 |
nD1 |
81-165 |
85 |
e1x6oA1 |
1X6O |
2.1.1 |
0.885 |
0.0 |
0.411 |
2.2|3.0|1 |
0.775 |
0.817 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
5 |
no |
no |
PF17428 |
A0A1M7U0P8 |
3-119 |
nD1 |
21-115 |
95 |
e2m3xB1 |
2M3X |
5.1.10 |
0.87 |
0.0 |
0.0 |
4.8|8.9|0 |
0.778 |
1.319 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
1 |
7 |
no |
yes:1 |
PF17428 |
B8FTJ0 |
2-119 |
nD1 |
21-115 |
95 |
e2m3xB1 |
2M3X |
5.1.10 |
0.87 |
0.0 |
0.0 |
4.8|8.9|0 |
0.778 |
1.319 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
1 |
7 |
no |
yes:1 |
PF17428 |
A0A098B038 |
2-119 |
nD1 |
21-115 |
95 |
e2m3xB1 |
2M3X |
5.1.10 |
0.87 |
0.0 |
0.0 |
4.9|8.9|0 |
0.778 |
1.319 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
12-bladed |
1 |
7 |
no |
yes:1 |
PF17429 |
W5WLB4 |
21-74 |
nD1 |
1-75 |
75 |
e5do8A1 |
5DO8 |
12.1.1 |
0.918 |
0.0 |
0.0 |
6.0|6.0|1 |
0.811 |
0.833 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
2 |
5 |
no |
no |
PF17438 |
A0A764Z2E7 |
1-79 |
nD1 |
1-90 |
90 |
e4oloA1 |
4OLO |
304.54.1 |
0.92 |
0.0 |
0.0 |
5.3|5.3|1 |
0.914 |
0.882 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
2 |
3 |
no |
no |
PF17438 |
A0A0J8YDE4 |
1-79 |
nD1 |
1-100 |
100 |
e4oloA1 |
4OLO |
304.54.1 |
0.925 |
0.0 |
0.0 |
6.3|6.3|1 |
0.914 |
0.98 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CcmK-like |
CcmK-like |
2 |
3 |
no |
no |
PF17452 |
A0A1Q8UQZ2 |
2-79 |
nD1 |
1-80 |
80 |
e4v61AO1 |
4V61 |
616.1.1 |
0.924 |
0.0 |
0.0 |
5.9|5.9|0 |
0.802 |
0.982 |
pymol |
more |
good_domain |
alpha arrays |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
4 |
2 |
no |
no |
PF17456 |
F9RBA6 |
1-152 |
nD2 |
91-150 |
60 |
e2ivwA1 |
2IVW |
3454.1.1 |
0.912 |
0.0 |
0.473 |
5.1|8.3|1 |
0.711 |
0.67 |
pymol |
more |
good_domain |
beta barrels |
GspC HR domain/PilP-like |
GspC HR domain/PilP-like |
GspC HR domain/PilP-like |
1 |
6 |
yes:out |
no |
PF17461 |
A0A3B0PNX3 |
37-377 |
nD1 |
51-170 |
120 |
e6zkbK1 |
6ZKB |
3843.1.1 |
0.876 |
0.59 |
0.451 |
7.1|7.6|0 |
0.793 |
1.2 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
4 |
0 |
no |
yes:4 |
PF17462 |
A8GM48 |
1-162 |
nD1 |
6-120 |
115 |
e1r0dI1 |
1R0D |
601.1.2 |
0.93 |
0.0 |
0.0 |
8.1|8.1|1 |
0.779 |
0.697 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
no |
PF17462 |
A0A0B7J3I2 |
1-162 |
nD1 |
6-125 |
120 |
e2jswA1 |
2JSW |
601.1.2 |
0.904 |
0.0 |
0.0 |
7.5|8.3|1 |
0.695 |
0.727 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
4 |
0 |
no |
no |
PF17500 |
Q47503 |
1-96 |
nD1 |
1-95 |
95 |
e5lbmD1 |
5LBM |
3826.1.1 |
0.914 |
0.0 |
0.0 |
7.7|7.7|0 |
0.874 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
3 |
0 |
no |
yes:3 |
PF17517 |
A0A3M1ZZI3 |
168-475 |
nD3 |
176-285 |
110 |
e1nc7D1 |
1NC7 |
10.7.1 |
0.914 |
0.0 |
0.0 |
6.2|6.2|1 |
0.778 |
0.952 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Hypothetical protein TM1070 |
Hypothetical protein TM1070 |
1 |
7 |
no |
no |
PF17517 |
A0A3M1ZZI3 |
168-475 |
nD4 |
271-385 |
115 |
e1nc7D1 |
1NC7 |
10.7.1 |
0.889 |
0.0 |
0.0 |
5.5|5.5|1 |
0.717 |
0.996 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Hypothetical protein TM1070 |
Hypothetical protein TM1070 |
0 |
9 |
no |
no |
PF17517 |
A0A3M1ZZI3 |
168-475 |
nD5 |
386-500 |
115 |
e1nc7D1 |
1NC7 |
10.7.1 |
0.899 |
0.0 |
0.0 |
5.0|5.0|1 |
0.758 |
0.996 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Hypothetical protein TM1070 |
Hypothetical protein TM1070 |
1 |
8 |
no |
no |
PF17529 |
Q95WU4 |
34-194 |
nD1 |
106-180 |
75 |
e6f2rQ1 |
6F2R |
319.1.1 |
0.931 |
0.482 |
0.615 |
3.4|4.2|1 |
0.832 |
0.688 |
pymol |
more |
good_domain |
beta sandwiches |
HSP20-like |
HSP20-like chaperones |
HSP20-like chaperones |
1 |
8 |
no |
no |
PF17533 |
A0A7U4NSY3 |
28-196 |
nD1 |
61-195 |
135 |
e6od1B1 |
6OD1 |
283.2.1 |
0.948 |
0.0 |
0.0 |
5.6|5.7|1 |
0.889 |
1.216 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
gpW/gp25-like |
gpW/gp25-like |
2 |
4 |
yes:out |
no |
PF17533 |
A0A0H3DL17 |
28-196 |
nD1 |
61-195 |
135 |
e6od1B1 |
6OD1 |
283.2.1 |
0.947 |
0.0 |
0.0 |
5.3|5.3|1 |
0.889 |
1.216 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Creatinase/aminopeptidase-like |
gpW/gp25-like |
gpW/gp25-like |
2 |
4 |
yes:out |
no |
PF17534 |
P47274 |
1-186 |
nD1 |
6-165 |
160 |
e4uosA1 |
4UOS |
601.19.1 |
0.908 |
0.0 |
0.0 |
14.6|14.6|1 |
0.865 |
0.664 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
4 |
0 |
no |
yes:4 |
PF17534 |
A0A0H3DPM4 |
1-186 |
nD1 |
6-165 |
160 |
e4uosA1 |
4UOS |
601.19.1 |
0.896 |
0.0 |
0.0 |
13.1|13.1|1 |
0.872 |
0.664 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
4 |
0 |
no |
yes:4 |
PF17534 |
P75083 |
1-186 |
nD1 |
1-165 |
165 |
e4uosA1 |
4UOS |
601.19.1 |
0.894 |
0.0 |
0.0 |
13.3|13.3|1 |
0.893 |
0.685 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Apolipoprotein |
Apolipoprotein |
4 |
0 |
no |
yes:4 |
PF17535 |
A0A0F6CKI2 |
13-239 |
nD1 |
56-200 |
145 |
e5b3dB1 |
5B3D |
603.5.1 |
0.908 |
0.0 |
0.0 |
5.5|5.5|1 |
0.82 |
1.115 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
FlgN-like |
FlgN-like |
4 |
0 |
no |
no |
PF17535 |
P56723 |
1-219 |
nD2 |
66-135 |
70 |
e3d0wB1 |
3D0W |
4009.1.1 |
0.878 |
0.423 |
0.44 |
0.0|3.1|0 |
0.653 |
0.854 |
pymol |
more |
good_domain |
alpha bundles |
alpha-helical domain in AF1104-like proteins |
alpha-helical domain in AF1104-like proteins |
alpha-helical domain in AF1104-like proteins |
4 |
0 |
no |
no |
PF17555 |
A0A2W4V7Q0 |
15-287 |
nD1 |
11-160 |
150 |
e5lilA4 |
5LIL |
1075.1.2 |
0.948 |
0.504 |
0.0 |
6.2|6.2|1 |
0.684 |
0.785 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
MacB transmembrane domain |
4 |
0 |
no |
yes:5 |
PF17560 |
P83418 |
1-63 |
nD1 |
26-63 |
38 |
e6tqkA3 |
6TQK |
389.1.1 |
0.87 |
0.21 |
0.489 |
0.0|3.2|0 |
0.667 |
0.894 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
1 |
3 |
no |
no |
PF17579 |
Q9HFH6 |
1-160 |
nD1 |
1-145 |
145 |
e3aqqA1 |
3AQQ |
2.1.1 |
0.947 |
0.0 |
0.471 |
3.0|7.7|1 |
0.945 |
1.394 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
8 |
no |
no |
PF17579 |
P05471 |
1-158 |
nD1 |
1-145 |
145 |
e3aqqA1 |
3AQQ |
2.1.1 |
0.949 |
0.0 |
0.218 |
3.5|7.9|1 |
0.941 |
1.394 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
2 |
10 |
no |
no |
PF17581 |
P05475 |
2-442 |
nD2 |
101-185 |
85 |
e2qlvA1 |
2QLV |
331.4.1 |
0.893 |
0.0 |
0.0 |
8.2|8.2|1 |
0.733 |
0.714 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
2 |
5 |
no |
no |
PF17581 |
A0A2H5BST3 |
3-454 |
nD1 |
6-100 |
95 |
e1aisA2 |
1AIS |
331.1.1 |
0.889 |
0.0 |
0.0 |
3.8|3.8|1 |
0.677 |
1.005 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
1 |
7 |
no |
no |
PF17581 |
A0A2H5BST3 |
3-454 |
nD2 |
101-185 |
85 |
e3vn5A2 |
3VN5 |
331.1.1 |
0.904 |
0.0 |
0.0 |
5.4|6.3|0 |
0.907 |
0.899 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
2 |
5 |
no |
no |
PF17592 |
C3MXN3 |
1-80 |
nD1 |
1-75 |
75 |
e2w2uA2 |
2W2U |
604.12.1 |
0.858 |
0.0 |
0.0 |
7.6|7.6|1 |
0.834 |
0.867 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF17597 |
C3MXM9 |
1-82 |
nD1 |
1-80 |
80 |
e4u7eB1 |
4U7E |
604.12.1 |
0.871 |
0.0 |
0.0 |
6.8|6.8|1 |
0.92 |
0.925 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:2 |
PF17597 |
A0A650CT69 |
1-81 |
nD1 |
1-75 |
75 |
e4zeyA1 |
4ZEY |
604.12.1 |
0.923 |
0.0 |
0.0 |
7.2|7.2|1 |
0.895 |
0.867 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF17619 |
A0A016VLM7 |
10-107 |
nD1 |
6-110 |
105 |
e5o5jF1 |
5O5J |
304.12.1 |
0.853 |
0.0 |
0.0 |
8.3|8.3|1 |
0.888 |
0.991 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ribosomal protein S6 |
Ribosomal protein S6 |
3 |
5 |
no |
no |
PF17623 |
H2C888 |
1-274 |
nD1 |
6-75 |
70 |
e3pcoC2 |
3PCO |
192.7.1 |
0.891 |
0.614 |
0.501 |
7.4|8.8|1 |
0.682 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
tRNA-binding arm |
tRNA-binding arm |
3 |
0 |
no |
yes:out |
PF17630 |
A0A2A8VJJ7 |
1-68 |
nD1 |
6-68 |
63 |
e1khiA1 |
1KHI |
2.1.1 |
0.926 |
0.0 |
0.0 |
6.5|6.8|1 |
0.812 |
0.606 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
3 |
no |
no |
PF17631 |
A0A506Q555 |
24-163 |
nD1 |
31-164 |
134 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.925 |
0.0 |
0.0 |
7.1|7.4|0 |
0.882 |
0.876 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
7 |
yes:out |
no |
PF17647 |
A0A7T3KU45 |
4-119 |
nD1 |
1-120 |
120 |
e1wu0A1 |
1WU0 |
5041.1.1 |
0.922 |
0.0 |
0.0 |
4.9|4.9|1 |
0.97 |
1.538 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
3 |
0 |
no |
yes:4 |
PF17647 |
A0A7D5SNN7 |
4-119 |
nD1 |
1-120 |
120 |
e1wu0A1 |
1WU0 |
5041.1.1 |
0.922 |
0.0 |
0.0 |
4.9|4.9|1 |
0.97 |
1.538 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
3 |
0 |
no |
yes:4 |
PF17709 |
A0A2R9AAB2 |
7-74 |
nD1 |
1-25,61-70 |
35 |
e7l3lA3 |
7L3L |
386.1.1 |
0.886 |
0.091 |
0.213 |
0.0|3.3|0 |
0.679 |
1.061 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
0 |
3 |
no |
no |
PF17717 |
L8YCJ7 |
1-168 |
nD1 |
41-90,131-155 |
75 |
e1m62A1 |
1M62 |
604.3.1 |
0.92 |
0.0 |
0.0 |
5.5|5.5|1 |
0.861 |
0.852 |
pymol |
na |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
no |
yes:3 |
PF17748 |
A0A1D8PP94 |
1-181 |
nD1 |
1-185 |
185 |
e2oqbA1 |
2OQB |
220.1.1 |
0.949 |
0.0 |
0.0 |
9.4|9.9|1 |
0.985 |
1.516 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
8 |
no |
no |
PF17761 |
R5AN46 |
7-141 |
nD1 |
26-140 |
115 |
e3mkwB1 |
3MKW |
101.1.1 |
0.918 |
0.3 |
0.397 |
4.4|4.4|1 |
0.907 |
1.575 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
0 |
no |
no |
PF17761 |
W0F5L2 |
16-148 |
nD1 |
6-95 |
90 |
e1ldjA1 |
1LDJ |
101.1.2 |
0.947 |
0.0 |
0.0 |
3.8|4.6|1 |
0.806 |
0.947 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
0 |
no |
no |
PF17819 |
A6X8Z9 |
230-368 |
nD1 |
331-375 |
45 |
e7jtku1 |
7JTK |
541.1.1 |
0.921 |
0.974 |
0.965 |
0.0|0.0|1 |
0.934 |
0.909 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
3 |
0 |
no |
no |
PF17823 |
Q4V7A5 |
1-477 |
nD1 |
171-245 |
75 |
e2n3dA1 |
2N3D |
207.14.1 |
0.87 |
0.0 |
0.0 |
4.6|4.6|1 |
0.717 |
0.777 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Bactofilin A |
Bactofilin A |
0 |
8 |
yes:out |
yes:out |
PF17824 |
H2QW99 |
92-499 |
nD1 |
96-133 |
38 |
e7jtku1 |
7JTK |
541.1.1 |
0.939 |
0.969 |
0.965 |
0.0|0.0|1 |
0.83 |
0.768 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
3 |
0 |
no |
no |
PF18154 |
V4IUJ2 |
299-416 |
nD3 |
146-168,191-210,262-410 |
192 |
e4zsfA1 |
4ZSF |
2008.1.1 |
0.946 |
0.0 |
0.907 |
4.5|4.5|1 |
0.722 |
0.941 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
9 |
no |
no |
PF18154 |
A0A0T6LSB3 |
259-376 |
nD2 |
131-385 |
255 |
e2e52A1 |
2E52 |
2008.1.1 |
0.919 |
0.0 |
0.95 |
4.6|4.6|1 |
0.77 |
1.25 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
9 |
10 |
no |
no |
PF18165 |
A0A1Y5TSV4 |
18-147 |
nD1 |
6-165 |
160 |
e6m6vD1 |
6M6V |
601.7.1 |
0.859 |
0.0 |
0.0 |
7.3|8.6|0 |
0.887 |
1.135 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
7 |
0 |
no |
no |
PF18167 |
A0A0N0D627 |
64-261 |
nD2 |
56-260 |
205 |
e5lf8A1 |
5LF8 |
221.4.1 |
0.943 |
0.794 |
0.919 |
6.7|8.4|1 |
0.86 |
1.331 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
6 |
9 |
yes:out |
no |
PF18167 |
A0A564T4F6 |
46-242 |
nD2 |
31-240 |
210 |
e2pnyA1 |
2PNY |
221.4.1 |
0.949 |
0.844 |
0.902 |
6.3|9.2|1 |
0.731 |
1.364 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
9 |
9 |
no |
yes:out |
PF18167 |
A0A6I3NZM2 |
43-232 |
nD1 |
31-90,126-233 |
168 |
e2pnyA1 |
2PNY |
221.4.1 |
0.945 |
0.724 |
0.894 |
6.5|9.2|1 |
0.75 |
1.091 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
6 |
8 |
no |
yes:out |
PF18183 |
M3C6R6 |
17-208 |
nD1 |
31-195 |
165 |
e6y07A1 |
6Y07 |
192.29.1 |
0.894 |
0.0 |
0.0 |
8.3|9.5|0 |
0.723 |
2.171 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:3 |
PF18183 |
A0A089Z189 |
27-218 |
nD2 |
31-65,131-195 |
100 |
e6y07A1 |
6Y07 |
192.29.1 |
0.888 |
0.0 |
0.0 |
8.7|9.2|0 |
0.749 |
1.316 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
yes:out |
PF18303 |
W4QZT7 |
11-154 |
nD1 |
6-105 |
100 |
e5uhqA1 |
5UHQ |
6155.1.1 |
0.878 |
0.0 |
0.0 |
6.4|6.4|1 |
0.612 |
1.143 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
TOG superfamily |
SWEET transporter |
SWEET transporter |
5 |
0 |
no |
yes:3 |
PF18398 |
A0A0J7K5T0 |
10-45 |
nD1 |
6-53 |
48 |
e2b5bA1 |
2B5B |
383.1.1 |
0.862 |
0.306 |
0.306 |
0.0|0.0|1 |
0.833 |
1.171 |
pymol |
more |
good_domain |
few secondary structure elements |
Defensin-like |
Defensin-related |
Defensin-related |
2 |
3 |
no |
no |
PF18399 |
T1GX89 |
32-97 |
nD1 |
37-84 |
48 |
e2b9lA1 |
2B9L |
6039.1.1 |
0.916 |
0.131 |
0.087 |
2.9|2.9|1 |
0.407 |
0.762 |
pymol |
more |
good_domain |
few secondary structure elements |
CLIP domain |
CLIP domain |
CLIP domain |
1 |
3 |
yes:out |
no |
PF18474 |
Q5BKL1 |
1-220 |
nD1 |
6-195,236-245 |
200 |
e6wxxC2 |
6WXX |
2008.1.1 |
0.928 |
0.0 |
0.0 |
7.3|8.7|0 |
0.897 |
0.98 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
6 |
no |
no |
PF18478 |
A0A4Q0GI62 |
1-82 |
nD1 |
1-130 |
130 |
e6swlA1 |
6SWL |
2007.1.3 |
0.879 |
0.0 |
0.0 |
6.6|6.6|1 |
0.779 |
1.02 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
6 |
5 |
no |
no |
PF18480 |
A0A7V1F7X8 |
3-106 |
nD1 |
1-110 |
110 |
e6vgaA1 |
6VGA |
2007.1.3 |
0.946 |
0.0 |
0.0 |
6.1|7.9|1 |
0.841 |
0.863 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
CheY-like |
4 |
5 |
no |
no |
PF18546 |
O26547 |
142-274 |
nD2 |
156-275 |
120 |
e2bjnB1 |
2BJN |
873.1.1 |
0.946 |
0.0 |
0.0 |
9.2|9.7|1 |
0.775 |
0.702 |
pymol |
more |
good_domain |
a+b complex topology |
H-NOX domain |
H-NOX domain |
H-NOX domain |
4 |
4 |
no |
no |
PF18547 |
A0A2R6CXZ8 |
205-255 |
nD2 |
201-250 |
50 |
e4iloB6 |
4ILO |
375.1.1 |
0.9 |
0.966 |
0.967 |
0.0|4.0|1 |
0.968 |
0.893 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF18547 |
A0A7D5QBC1 |
209-260 |
nD3 |
206-255 |
50 |
e4iloB6 |
4ILO |
375.1.1 |
0.893 |
0.958 |
0.958 |
0.0|4.0|1 |
0.887 |
0.893 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF18551 |
A0A256ZI79 |
17-195 |
nD3 |
151-185 |
35 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.88 |
0.939 |
0.967 |
0.0|2.5|0 |
0.76 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF18551 |
A0A3G6MYC7 |
121-307 |
nD3 |
206-280 |
75 |
e1x0tA1 |
1X0T |
375.1.1 |
0.934 |
0.0 |
0.957 |
2.5|3.0|1 |
0.61 |
1.339 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
4 |
no |
no |
PF18551 |
A0A3P3W7M7 |
126-309 |
nD3 |
206-220,266-280 |
30 |
e2fiyA1 |
2FIY |
375.1.1 |
0.889 |
0.255 |
0.959 |
2.5|2.5|1 |
0.722 |
0.536 |
na |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF18656 |
D6S9W1 |
538-578 |
nD7 |
536-580 |
45 |
e2k49A2 |
2K49 |
4325.1.1 |
0.902 |
0.53 |
0.214 |
0.0|2.2|0 |
0.525 |
0.776 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
1 |
2 |
yes:out |
yes:out |
PF18656 |
A0A133YW19 |
68-105 |
nD1 |
66-105 |
40 |
e2k49A2 |
2K49 |
4325.1.1 |
0.915 |
0.926 |
0.896 |
0.0|2.8|0 |
0.468 |
0.69 |
pymol |
na |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
1 |
2 |
yes:out |
no |
PF18656 |
Q51912 |
478-517 |
nD6 |
481-520,526-569 |
84 |
e2k49A2 |
2K49 |
4325.1.1 |
0.912 |
0.625 |
0.269 |
0.0|2.4|0 |
0.918 |
1.448 |
pymol |
na |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
2 |
4 |
yes:out |
yes:out |
PF18657 |
A0A345P1N7 |
54-135 |
nD2 |
56-140 |
85 |
e5fm4B1 |
5FM4 |
11.1.1 |
0.911 |
0.0 |
0.0 |
2.9|3.5|1 |
0.715 |
0.787 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
7 |
no |
no |
PF18657 |
A0A7K3XXG0 |
80-162 |
nD2 |
81-170 |
90 |
e4ng0A1 |
4NG0 |
11.1.9 |
0.902 |
0.0 |
0.0 |
3.7|3.7|1 |
0.742 |
0.928 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Cell surface adhesin Lar_0958 |
2 |
9 |
no |
no |
PF18658 |
I3N2Y5 |
72-135 |
nD1 |
66-135 |
70 |
e6skgBo1 |
6SKG |
386.1.1 |
0.916 |
0.0 |
0.82 |
2.9|3.2|0 |
0.949 |
2.121 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
3 |
1 |
no |
no |
PF18658 |
A0A803JD89 |
16-75 |
nD1 |
16-85 |
70 |
e6skgBo1 |
6SKG |
386.1.1 |
0.905 |
0.0 |
0.875 |
3.0|3.2|0 |
0.935 |
2.121 |
pymol |
more |
good_domain |
few secondary structure elements |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
beta-beta-alpha zinc fingers |
3 |
2 |
no |
no |
PF18716 |
A0A485LDY2 |
353-396 |
nD2 |
356-395 |
40 |
e5an9G1 |
5AN9 |
377.1.1 |
0.937 |
0.693 |
0.73 |
3.7|4.8|1 |
0.618 |
0.8 |
pymol |
more |
good_domain |
few secondary structure elements |
Glucocorticoid receptor-like |
LIM domain-like |
LIM domain-like |
1 |
2 |
no |
no |
PF18718 |
A0A5C2T4F8 |
4-117 |
nD1 |
26-170 |
145 |
e6jx3B1 |
6JX3 |
101.1.2 |
0.895 |
0.0 |
0.0 |
3.7|5.8|0 |
0.879 |
1.526 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
8 |
no |
no |
PF18718 |
F4RI16 |
101-218 |
nD2 |
96-265 |
170 |
e6jx3B1 |
6JX3 |
101.1.2 |
0.918 |
0.0 |
0.0 |
2.9|3.3|0 |
0.866 |
1.789 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
3 |
8 |
no |
no |
PF18722 |
A0A4D4MDK7 |
1-175 |
nD1 |
1-175 |
175 |
e6g04A1 |
6G04 |
592.2.1 |
0.881 |
0.0 |
0.0 |
3.7|3.7|1 |
0.786 |
1.872 |
pymol |
more |
good_domain |
alpha arrays |
PWI domain-like |
YugE-like |
YugE-like |
6 |
4 |
no |
yes:1 |
PF18725 |
A0A1I1ITU0 |
23-237 |
nD1 |
36-195 |
160 |
e5yjcA1 |
5YJC |
601.7.1 |
0.918 |
0.201 |
0.64 |
7.4|7.4|1 |
0.716 |
1.135 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
4 |
0 |
no |
no |
PF18725 |
V6L0M9 |
29-242 |
nD1 |
51-200 |
150 |
e6tugA1 |
6TUG |
601.7.1 |
0.932 |
0.353 |
0.841 |
6.8|7.4|1 |
0.713 |
1.064 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
4 |
0 |
no |
no |
PF18729 |
A0A0J8VGL1 |
1-282 |
nD2 |
131-315 |
185 |
e6tugA1 |
6TUG |
601.7.1 |
0.927 |
0.238 |
0.0 |
4.8|4.8|1 |
0.667 |
1.312 |
pymol |
na |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
7 |
0 |
no |
yes:out |
PF18729 |
A0A379W1J8 |
1-282 |
nD2 |
131-305 |
175 |
e3brjA1 |
3BRJ |
3931.1.1 |
0.932 |
0.233 |
0.461 |
5.2|5.2|1 |
0.583 |
1.042 |
pymol |
more |
good_domain |
alpha bundles |
MtlR-like |
MtlR-like |
MtlR-like |
6 |
0 |
no |
no |
PF18732 |
A0A6I3PV30 |
490-621 |
nD4 |
481-620 |
140 |
e5cwnA1 |
5CWN |
109.3.1 |
0.915 |
0.0 |
0.0 |
5.9|5.9|1 |
0.353 |
0.704 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
0 |
no |
no |
PF18736 |
A0A374AI62 |
1-148 |
nD1 |
6-145 |
140 |
e4rgpB1 |
4RGP |
601.7.1 |
0.922 |
0.415 |
0.676 |
4.6|4.6|1 |
0.718 |
0.993 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
6 |
5 |
no |
no |
PF18738 |
A0A2B4RKF8 |
39-183 |
nD1 |
11-195 |
185 |
e6kcrA1 |
6KCR |
3931.1.1 |
0.921 |
0.56 |
0.464 |
4.6|5.3|1 |
0.595 |
1.101 |
pymol |
more |
good_domain |
alpha bundles |
MtlR-like |
MtlR-like |
MtlR-like |
8 |
0 |
no |
no |
PF18738 |
A0A6J8DIK9 |
39-177 |
nD1 |
6-170 |
165 |
e3brjA1 |
3BRJ |
3931.1.1 |
0.869 |
0.567 |
0.596 |
5.6|7.0|0 |
0.6 |
0.982 |
pymol |
more |
good_domain |
alpha bundles |
MtlR-like |
MtlR-like |
MtlR-like |
6 |
0 |
no |
no |
PF18738 |
A0A3M6UPJ7 |
39-180 |
nD1 |
6-175 |
170 |
e5yjcA1 |
5YJC |
601.7.1 |
0.937 |
0.072 |
0.185 |
7.1|7.1|1 |
0.741 |
1.206 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
7 |
0 |
no |
no |
PF18753 |
A0A1G5JRW8 |
1-201 |
nD1 |
1-200 |
200 |
e2ar1A1 |
2AR1 |
1.1.9 |
0.927 |
0.0 |
0.155 |
7.1|8.0|1 |
0.908 |
1.449 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
6 |
9 |
no |
no |
PF18753 |
A0A840N3C9 |
1-201 |
nD1 |
1-210 |
210 |
e2ar1A1 |
2AR1 |
1.1.9 |
0.931 |
0.0 |
0.0 |
6.9|7.5|1 |
0.917 |
1.522 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
6 |
10 |
no |
no |
PF18753 |
A0A2G2I458 |
2-197 |
nD1 |
1-200 |
200 |
e2ar1A1 |
2AR1 |
1.1.9 |
0.942 |
0.0 |
0.202 |
7.7|7.7|1 |
0.905 |
1.449 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
6 |
9 |
no |
no |
PF18754 |
I0JIT2 |
4-256 |
nD2 |
1-24,66-279 |
238 |
e5j3eA1 |
5J3E |
1.1.9 |
0.861 |
0.0 |
0.31 |
6.4|7.9|1 |
0.878 |
1.725 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
3 |
13 |
no |
no |
PF18754 |
A0A6A9SUL7 |
2-228 |
nD1 |
1-30,63-235 |
203 |
e2hd9A1 |
2HD9 |
1.1.9 |
0.946 |
0.577 |
0.677 |
8.4|8.5|1 |
0.946 |
1.471 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
PUA domain |
3 |
10 |
no |
no |
PF18759 |
M2QHD2 |
64-386 |
nD1 |
16-365,531-595 |
415 |
e2yhaA3 |
2YHA |
2484.1.1 |
0.853 |
0.0 |
0.191 |
4.7|14.1|1 |
0.755 |
2.117 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
14 |
10 |
no |
no |
PF18759 |
A0A0C3E594 |
26-346 |
nD1 |
1-45,71-85,126-325,491-535 |
305 |
e3kkrA1 |
3KKR |
2484.1.1 |
0.911 |
0.0 |
0.0 |
4.0|9.6|1 |
0.883 |
1.556 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
9 |
7 |
no |
no |
PF18780 |
A0A2D6LUK4 |
6-52 |
nD1 |
1-55 |
55 |
e2xsjC1 |
2XSJ |
101.1.1 |
0.934 |
0.0 |
0.0 |
5.1|5.1|1 |
0.774 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF18788 |
A0A5V4VYK5 |
10-106 |
nD1 |
6-85 |
80 |
e3zxuC2 |
3ZXU |
4099.1.1 |
0.855 |
0.0 |
0.0 |
4.8|6.4|0 |
0.712 |
0.777 |
pymol |
more |
good_domain |
a+b two layers |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
1 |
5 |
no |
no |
PF18788 |
I2UHV1 |
10-106 |
nD1 |
6-130 |
125 |
e3zxuC2 |
3ZXU |
4099.1.1 |
0.911 |
0.0 |
0.0 |
5.4|6.2|0 |
0.881 |
1.214 |
pymol |
more |
good_domain |
a+b two layers |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
2 |
5 |
no |
no |
PF18788 |
A0A5Y0JK17 |
10-106 |
nD1 |
6-120 |
115 |
e3zxuC2 |
3ZXU |
4099.1.1 |
0.923 |
0.0 |
0.0 |
5.4|6.4|0 |
0.881 |
1.117 |
pymol |
more |
good_domain |
a+b two layers |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
Kinetochore globular domain-like |
2 |
5 |
no |
no |
PF18798 |
Q5F7S8 |
944-1056 |
nD4 |
916-1100 |
185 |
e5a4oB1 |
5A4O |
295.1.1 |
0.924 |
0.0 |
0.0 |
3.0|4.1|0 |
0.963 |
1.516 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
6 |
7 |
no |
no |
PF18799 |
D9Y826 |
231-388 |
nD3 |
291-355 |
65 |
e2k49A2 |
2K49 |
4325.1.1 |
0.866 |
0.0 |
0.0 |
3.6|3.6|1 |
0.854 |
1.121 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
1 |
3 |
no |
no |
PF18809 |
T1CYV3 |
137-244 |
nD1 |
92-240 |
149 |
e1v74A1 |
1V74 |
234.3.1 |
0.927 |
0.0 |
0.0 |
5.8|6.9|0 |
0.776 |
1.49 |
pymol |
more |
good_domain |
a+b two layers |
Microbial ribonucleases-like |
Colicin D nuclease domain |
Colicin D nuclease domain |
5 |
6 |
no |
no |
PF18810 |
A0A174MW35 |
5-123 |
nD1 |
6-125 |
120 |
e3u97A1 |
3U97 |
4312.1.1 |
0.906 |
0.773 |
0.0 |
6.5|6.5|1 |
0.934 |
1.326 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
6 |
no |
no |
PF18810 |
A0A374J2E5 |
8-123 |
nD1 |
6-120 |
115 |
e3u97A1 |
3U97 |
4312.1.1 |
0.92 |
0.772 |
0.0 |
6.6|6.6|1 |
0.934 |
1.271 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
4 |
4 |
no |
no |
PF18812 |
Q9ZLY5 |
776-893 |
nD6 |
721-900 |
180 |
e3u97A1 |
3U97 |
4312.1.1 |
0.929 |
0.0 |
0.0 |
5.5|5.5|1 |
0.908 |
1.989 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
6 |
7 |
no |
no |
PF18812 |
A0A128EG14 |
450-569 |
nD4 |
411-575 |
165 |
e1v74A1 |
1V74 |
234.3.1 |
0.915 |
0.0 |
0.0 |
5.8|6.3|0 |
0.841 |
1.65 |
pymol |
more |
good_domain |
a+b two layers |
Microbial ribonucleases-like |
Colicin D nuclease domain |
Colicin D nuclease domain |
5 |
6 |
no |
no |
PF18813 |
R7GJD4 |
16-185 |
nD1 |
6-205 |
200 |
e1v74A1 |
1V74 |
234.3.1 |
0.881 |
0.0 |
0.0 |
2.8|2.8|1 |
0.788 |
2.0 |
pymol |
more |
good_domain |
a+b two layers |
Microbial ribonucleases-like |
Colicin D nuclease domain |
Colicin D nuclease domain |
7 |
9 |
no |
no |
PF18814 |
A0A380YYU7 |
403-625 |
nD4 |
551-660 |
110 |
e6vmeC1 |
6VME |
192.15.1 |
0.854 |
0.0 |
0.0 |
5.2|6.4|0 |
0.731 |
1.023 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
5 |
0 |
no |
no |
PF18821 |
A0A1T4V8V3 |
891-980 |
nD8 |
891-1010 |
120 |
e3gpvB1 |
3GPV |
101.1.9 |
0.91 |
0.0 |
0.0 |
3.3|3.9|0 |
0.607 |
1.371 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
3 |
4 |
no |
no |
PF18822 |
A0A0V8RVZ4 |
90-211 |
nD2 |
76-210 |
135 |
e2dnxA1 |
2DNX |
603.1.1 |
0.929 |
0.502 |
0.891 |
10.0|10.1|0 |
0.68 |
1.286 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
no |
PF18828 |
R9LU92 |
2-110 |
nD1 |
1-115 |
115 |
e4e0qA2 |
4E0Q |
2492.1.1 |
0.899 |
0.0 |
0.0 |
3.5|3.5|1 |
0.817 |
0.71 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
4 |
5 |
no |
no |
PF18828 |
A0A1Z2XTS7 |
2-100 |
nD1 |
1-105 |
105 |
e4e0qA2 |
4E0Q |
2492.1.1 |
0.866 |
0.0 |
0.0 |
3.7|3.7|1 |
0.77 |
0.648 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
4 |
no |
no |
PF18830 |
R8VZL7 |
689-770 |
nD7 |
691-770 |
80 |
e2ra8A1 |
2RA8 |
4210.1.1 |
0.927 |
0.0 |
0.0 |
5.3|5.3|1 |
0.837 |
0.678 |
pymol |
more |
good_domain |
a+b two layers |
WGR domain |
WGR domain |
WGR domain |
2 |
5 |
no |
no |
PF18832 |
A0A1Y4FA71 |
100-183 |
nD2 |
96-180 |
85 |
e2efiA1 |
2EFI |
4.8.1 |
0.886 |
0.0 |
0.0 |
3.7|4.1|0 |
0.811 |
1.288 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromo domain-like |
Chromo domain-like |
1 |
4 |
no |
no |
PF18840 |
A0A1I3I9V3 |
364-459 |
nD3 |
366-545 |
180 |
e1x91A1 |
1X91 |
633.4.1 |
0.857 |
0.0 |
0.0 |
6.2|6.2|1 |
0.56 |
1.208 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Plant invertase/pectin methylesterase inhibitor |
Plant invertase/pectin methylesterase inhibitor |
4 |
4 |
no |
no |
PF18852 |
C7H1D6 |
172-384 |
nD5 |
261-370 |
110 |
e2ra8A1 |
2RA8 |
4210.1.1 |
0.879 |
0.0 |
0.0 |
5.2|5.2|1 |
0.844 |
0.932 |
pymol |
more |
good_domain |
a+b two layers |
WGR domain |
WGR domain |
WGR domain |
2 |
6 |
no |
no |
PF18852 |
A0A1Y4WHP5 |
3-208 |
nD2 |
86-185 |
100 |
e6d7kH1 |
6D7K |
7089.1.1 |
0.85 |
0.0 |
0.0 |
4.0|4.0|1 |
0.868 |
1.471 |
pymol |
more |
good_domain |
a+b two layers |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
Methane monooxygenase hydroxylase, MmoD |
1 |
4 |
no |
no |
PF18853 |
A0A1H7NRT2 |
192-432 |
nD3 |
186-375,416-430 |
205 |
e2arhA1 |
2ARH |
213.1.1 |
0.867 |
0.0 |
0.0 |
5.9|5.9|1 |
0.638 |
1.246 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
7 |
6 |
no |
no |
PF18864 |
S5Y7S3 |
14-199 |
nD1 |
16-70,101-125,151-180 |
110 |
e6egcA1 |
6EGC |
192.29.1 |
0.885 |
0.0 |
0.0 |
6.0|6.0|1 |
0.645 |
1.447 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
3 |
no |
no |
PF18864 |
A0A1G9CI38 |
32-226 |
nD1 |
31-90,126-150,181-230 |
135 |
e2lp4A1 |
2LP4 |
601.3.1 |
0.874 |
0.0 |
0.0 |
6.6|6.6|1 |
0.766 |
1.098 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine-containing phosphotransfer domain, HPT domain |
Histidine-containing phosphotransfer domain, HPT domain |
7 |
3 |
no |
yes:out |
PF18866 |
A0A1A8HWI8 |
50-110 |
nD1 |
1-85 |
85 |
e6m90A1 |
6M90 |
145.1.1 |
0.923 |
0.0 |
0.0 |
2.9|2.9|1 |
0.655 |
1.349 |
pymol |
more |
good_domain |
alpha arrays |
F-box domain |
F-box domain |
F-box domain |
4 |
2 |
no |
no |
PF18872 |
Q13117 |
314-334 |
nD2 |
166-495 |
330 |
e2odlA1 |
2ODL |
207.2.1 |
0.929 |
0.0 |
0.0 |
23.1|23.1|1 |
0.915 |
0.868 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
14 |
no |
no |
PF18872 |
A0A1D5QN53 |
120-140 |
nD2 |
76-165 |
90 |
e6y53o2 |
6Y53 |
304.9.1 |
0.924 |
0.993 |
0.784 |
0.0|11.0|0 |
0.966 |
0.947 |
pymol |
na |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
0 |
2 |
no |
no |
PF18889 |
R6HDF3 |
407-429 |
nD3 |
251-530 |
280 |
e4peuA1 |
4PEU |
207.2.1 |
0.893 |
0.993 |
0.991 |
22.8|22.8|1 |
0.876 |
0.737 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
19 |
no |
no |
PF18892 |
A0A7X9SQP0 |
101-154 |
nD2 |
111-155 |
45 |
e1vzyA2 |
1VZY |
4203.1.1 |
0.924 |
0.221 |
0.251 |
0.0|0.0|1 |
0.428 |
0.756 |
pymol |
more |
good_domain |
few secondary structure elements |
HSP33 redox switch-like |
HSP33 redox switch-like |
HSP33 redox switch-like |
2 |
1 |
no |
no |
PF18897 |
D7VN26 |
18-205 |
nD1 |
17-220 |
204 |
e1miuA2 |
1MIU |
2.1.1 |
0.893 |
0.0 |
0.0 |
3.6|4.9|1 |
0.767 |
1.962 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
11 |
no |
no |
PF18900 |
I0HYS3 |
57-299 |
nD1 |
26-300 |
275 |
e4mk6A2 |
4MK6 |
191.1.1 |
0.926 |
0.0 |
0.0 |
8.0|8.0|1 |
0.849 |
2.292 |
pymol |
more |
good_domain |
alpha bundles |
Tetracyclin repressor-like, C-terminal domain |
Tetracyclin repressor-like, C-terminal domain |
Tetracyclin repressor-like, C-terminal domain |
9 |
2 |
no |
yes:9 |
PF18900 |
A0A2H5YG11 |
29-274 |
nD1 |
21-245 |
225 |
e6a2jA1 |
6A2J |
5069.1.1 |
0.87 |
0.0 |
0.0 |
5.9|6.3|0 |
0.66 |
1.061 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
8 |
0 |
no |
yes:8 |
PF18903 |
A0A6M8VDV6 |
2-72 |
nD1 |
1-65 |
65 |
e6rwxx2 |
6RWX |
327.16.1 |
0.871 |
0.0 |
0.0 |
3.9|3.9|1 |
0.758 |
0.909 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif II in type III secretion system |
Ring-building motif II in type III secretion system |
3 |
3 |
no |
no |
PF18903 |
A0A3D6BFU1 |
2-72 |
nD1 |
1-65 |
65 |
e6rwxx2 |
6RWX |
327.16.1 |
0.871 |
0.0 |
0.0 |
3.9|3.9|1 |
0.758 |
0.909 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif II in type III secretion system |
Ring-building motif II in type III secretion system |
3 |
3 |
no |
no |
PF18907 |
A0A174DY84 |
4-155 |
nD1 |
1-170 |
170 |
e3sk9A1 |
3SK9 |
131.1.1 |
0.916 |
0.203 |
0.259 |
2.3|6.6|1 |
0.604 |
0.736 |
pymol |
more |
good_domain |
alpha complex topology |
PDEase-like |
HD-domain/PDEase-like |
HD-domain/PDEase-like |
10 |
2 |
no |
no |
PF18908 |
G7GYB7 |
12-91 |
nD1 |
6-95 |
90 |
e4m70B1 |
4M70 |
103.9.1 |
0.936 |
0.0 |
0.0 |
6.7|6.7|1 |
0.702 |
1.059 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RanGAP2 N-terminal domain |
RanGAP2 N-terminal domain |
4 |
0 |
no |
no |
PF18914 |
A0A537B8K3 |
100-162 |
nD1 |
1-170 |
170 |
e6vedA1 |
6VED |
4.1.1 |
0.857 |
0.211 |
0.734 |
2.6|8.3|0 |
0.819 |
2.125 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
12 |
no |
no |
PF18917 |
A0A0G0B7G7 |
12-55 |
nD1 |
11-105 |
95 |
e1fpoB2 |
1FPO |
622.1.1 |
0.944 |
0.0 |
0.0 |
5.0|5.0|1 |
0.844 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
5 |
0 |
no |
yes:3 |
PF18925 |
A0A1M6BXP2 |
5-116 |
nD1 |
1-130 |
130 |
e6xj7A2 |
6XJ7 |
4091.1.1 |
0.905 |
0.754 |
0.727 |
8.9|8.9|1 |
0.805 |
0.887 |
pymol |
more |
good_domain |
beta complex topology |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
1 |
9 |
no |
no |
PF18925 |
A0A178J912 |
5-128 |
nD1 |
1-140 |
140 |
e6xj7A2 |
6XJ7 |
4091.1.1 |
0.902 |
0.68 |
0.664 |
9.7|9.7|1 |
0.837 |
0.956 |
pymol |
more |
good_domain |
beta complex topology |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
2 |
8 |
no |
no |
PF18925 |
A0A177N2J5 |
5-117 |
nD1 |
1-130 |
130 |
e6xj7A2 |
6XJ7 |
4091.1.1 |
0.906 |
0.799 |
0.792 |
9.6|9.6|1 |
0.804 |
0.887 |
pymol |
more |
good_domain |
beta complex topology |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
L,D-transpeptidase catalytic domain-like |
1 |
9 |
no |
no |
PF18930 |
G2J6L2 |
2-41 |
nD1 |
1-45 |
45 |
e5tbwAP1 |
5TBW |
375.1.1 |
0.929 |
0.0 |
0.0 |
3.7|3.8|1 |
0.612 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF18932 |
A0A1M5JKK4 |
7-84 |
nD1 |
31-130 |
100 |
e5eurA1 |
5EUR |
1121.1.1 |
0.946 |
0.905 |
0.905 |
0.0|5.4|0 |
0.69 |
0.787 |
pymol |
more |
good_domain |
alpha superhelices |
Hypothetical protein SF216 |
Hypothetical protein SF216 |
Hypothetical protein SF216 |
4 |
2 |
no |
no |
PF18934 |
A0A1H5EP76 |
34-896 |
nD5 |
576-730,786-820 |
190 |
e2iw3B1 |
2IW3 |
109.4.1 |
0.885 |
0.0 |
0.0 |
5.4|6.9|1 |
0.511 |
0.664 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
0 |
no |
no |
PF18935 |
A0A261Q4X9 |
50-203 |
nD1 |
56-170 |
115 |
e5nenB1 |
5NEN |
5086.1.1 |
0.926 |
0.0 |
0.0 |
8.2|8.2|1 |
0.589 |
1.361 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
2 |
yes:out |
no |
PF18936 |
A0A6I2SUP7 |
32-109 |
nD1 |
6-109 |
104 |
e3trbA1 |
3TRB |
101.1.4 |
0.857 |
0.0 |
0.033 |
2.1|3.3|0 |
0.727 |
1.333 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
4 |
0 |
yes:in |
yes:3 |
PF18939 |
A0A1Y4AW72 |
32-687 |
nD1 |
31-260,301-320 |
250 |
e4z48B1 |
4Z48 |
71.1.1 |
0.906 |
0.967 |
0.97 |
9.0|9.0|1 |
0.744 |
1.316 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
10 |
yes:out |
no |
PF18939 |
A0A1Y4AW72 |
32-687 |
nD2 |
343-715 |
373 |
e5d0oA5 |
5D0O |
5084.5.1 |
0.944 |
0.972 |
0.983 |
13.3|13.6|1 |
0.865 |
1.014 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
4 |
20 |
yes:out |
no |
PF18939 |
A4BX01 |
115-787 |
nD3 |
111-145,171-360 |
225 |
e3bk5A1 |
3BK5 |
71.1.1 |
0.893 |
0.955 |
0.957 |
7.4|7.7|0 |
0.69 |
1.184 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
10 |
yes:out |
no |
PF18939 |
A4BX01 |
115-787 |
nD5 |
411-823 |
413 |
e6wumB1 |
6WUM |
5084.5.1 |
0.861 |
0.962 |
0.978 |
18.0|18.5|1 |
0.904 |
1.122 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
5 |
19 |
yes:out |
no |
PF18939 |
A0A286ILU4 |
113-757 |
nD2 |
111-355,376-395 |
265 |
e4z48B1 |
4Z48 |
71.1.1 |
0.922 |
0.968 |
0.967 |
9.0|9.0|1 |
0.713 |
1.395 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
10 |
yes:out |
no |
PF18939 |
A0A286ILU4 |
113-757 |
nD3 |
401-804 |
404 |
e7e4hA1 |
7E4H |
5084.5.1 |
0.914 |
0.973 |
0.983 |
11.3|11.7|0 |
0.859 |
1.098 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
6 |
20 |
yes:out |
no |
PF18941 |
F7V6K4 |
5-294 |
nD1 |
1-85 |
85 |
e1vl4B2 |
1VL4 |
512.1.1 |
0.86 |
0.0 |
0.0 |
4.5|4.5|1 |
0.777 |
0.749 |
pymol |
more |
good_domain |
a+b two layers |
a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) |
a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) |
a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) |
4 |
2 |
no |
no |
PF18954 |
A0A0S2VZD6 |
13-169 |
nD2 |
81-170 |
90 |
e3dnxA1 |
3DNX |
2008.1.1 |
0.933 |
0.0 |
0.0 |
6.7|6.8|1 |
0.756 |
0.441 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
3 |
6 |
no |
no |
PF18959 |
A0A562CVH5 |
9-202 |
nD1 |
1-65,91-203 |
178 |
e5b1rA1 |
5B1R |
209.1.1 |
0.886 |
0.0 |
0.0 |
6.4|6.4|1 |
0.925 |
1.38 |
pymol |
more |
good_domain |
a+b complex topology |
C-type lectin-like |
C-type lectin-like |
C-type lectin-like |
6 |
10 |
no |
no |
PF18960 |
A0A2N5NKL5 |
166-439 |
nD3 |
131-183,261-390 |
183 |
e2p22C1 |
2P22 |
192.15.1 |
0.859 |
0.0 |
0.0 |
2.9|3.6|0 |
0.599 |
1.702 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
6 |
2 |
yes:out |
no |
PF18963 |
A0A6I5X7P6 |
3-53 |
nD1 |
1-55 |
55 |
e1j5uA2 |
1J5U |
256.1.1 |
0.916 |
0.0 |
0.0 |
5.9|5.9|1 |
0.878 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF18963 |
A0A512T2R4 |
3-53 |
nD1 |
1-55 |
55 |
e1j5uA2 |
1J5U |
256.1.1 |
0.916 |
0.0 |
0.0 |
5.9|5.9|1 |
0.878 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF18963 |
A0A0A0JRM7 |
3-53 |
nD1 |
1-55 |
55 |
e1j5uA2 |
1J5U |
256.1.1 |
0.916 |
0.0 |
0.0 |
5.9|5.9|1 |
0.878 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF18975 |
R6RK71 |
64-405 |
nD2 |
66-405 |
340 |
e5amsA1 |
5AMS |
5.1.4 |
0.905 |
0.998 |
0.998 |
20.8|22.7|0 |
0.885 |
0.947 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
32 |
no |
yes:out |
PF18975 |
A0A1G5WSL3 |
40-385 |
nD2 |
41-385 |
345 |
e5n4aA2 |
5N4A |
5.1.4 |
0.887 |
0.998 |
0.998 |
15.5|20.8|1 |
0.881 |
0.961 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
2 |
32 |
no |
yes:out |
PF18975 |
A0A1Y4F671 |
70-412 |
nD2 |
76-413 |
338 |
e5amsA1 |
5AMS |
5.1.4 |
0.867 |
0.997 |
0.998 |
20.6|22.4|0 |
0.889 |
0.942 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
32 |
no |
yes:out |
PF18982 |
A0A1M6KJM5 |
30-470 |
nD2 |
131-245,266-305,311-345 |
190 |
e1fioA1 |
1FIO |
603.1.1 |
0.943 |
0.0 |
0.0 |
8.3|10.7|0 |
0.803 |
1.81 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
7 |
0 |
no |
no |
PF18987 |
A0A3A9HHB8 |
75-171 |
nD2 |
91-165 |
75 |
e7eydN12 |
7EYD |
807.1.1 |
0.887 |
0.0 |
0.0 |
3.9|3.9|1 |
0.938 |
1.21 |
pymol |
more |
good_domain |
a+b two layers |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
1 |
4 |
no |
no |
PF18987 |
A0A7U9RIZ1 |
75-172 |
nD2 |
91-170 |
80 |
e7eydN12 |
7EYD |
807.1.1 |
0.883 |
0.0 |
0.0 |
3.8|3.9|1 |
0.938 |
1.29 |
pymol |
more |
good_domain |
a+b two layers |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
1 |
4 |
no |
no |
PF18987 |
A0A6N8H5S7 |
75-171 |
nD2 |
91-165 |
75 |
e7eydN12 |
7EYD |
807.1.1 |
0.887 |
0.0 |
0.0 |
3.9|3.9|1 |
0.938 |
1.21 |
pymol |
more |
good_domain |
a+b two layers |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
Allophycocyanin linker chain (domain) |
1 |
4 |
no |
no |
PF18989 |
A0A0T6LN51 |
135-537 |
nD2 |
136-550 |
415 |
e3a4wB1 |
3A4W |
2002.1.1 |
0.93 |
0.0 |
0.999 |
13.5|26.2|1 |
0.91 |
1.326 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
11 |
15 |
yes:out |
no |
PF18990 |
A0A1D7XWW5 |
35-438 |
nD1 |
16-290,316-465 |
425 |
e6h3iF1 |
6H3I |
5084.5.4 |
0.929 |
0.995 |
0.994 |
19.0|23.3|1 |
0.722 |
1.012 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
7 |
20 |
yes:out |
no |
PF18990 |
A0A3N2MEC6 |
3-390 |
nD2 |
1-25,66-415 |
375 |
e6z34A1 |
6Z34 |
5084.5.4 |
0.913 |
0.992 |
0.993 |
19.9|19.9|1 |
0.844 |
0.893 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
4 |
22 |
no |
no |
PF19001 |
A0A5K4FBR0 |
51-234 |
nD2 |
141-265 |
125 |
e3bowA7 |
3BOW |
10.1.2 |
0.941 |
0.0 |
0.0 |
6.7|7.3|1 |
0.855 |
0.796 |
pymol |
na |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
8 |
no |
yes:out |
PF19001 |
A0A504YJQ7 |
46-226 |
nD3 |
136-255 |
120 |
e5gu5A1 |
5GU5 |
10.1.2 |
0.949 |
0.0 |
0.0 |
7.3|8.0|1 |
0.914 |
0.764 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
8 |
no |
yes:out |
PF19007 |
H2KUV9 |
187-437 |
nD1 |
76-315,331-450 |
360 |
e7b96B1 |
7B96 |
5.1.3 |
0.92 |
0.0 |
0.854 |
21.1|21.2|1 |
0.932 |
1.04 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
3 |
24 |
no |
no |
PF19007 |
A0A7M3QAF0 |
59-290 |
nD1 |
1-305 |
305 |
e1k32C2 |
1K32 |
5.1.3 |
0.894 |
0.0 |
0.956 |
17.2|20.2|1 |
0.928 |
0.882 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
2 |
21 |
no |
no |
PF19007 |
A0A5J4P3D3 |
184-442 |
nD1 |
76-455 |
380 |
e1q7fA1 |
1Q7F |
5.1.3 |
0.914 |
0.0 |
0.809 |
21.3|21.3|1 |
0.936 |
1.098 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
3 |
24 |
no |
no |
PF19009 |
A0A0R3UPE7 |
41-138 |
nD2 |
41-125,151-285 |
220 |
e1r0dI1 |
1R0D |
601.1.2 |
0.884 |
0.0 |
0.0 |
7.6|7.9|0 |
0.875 |
1.333 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
8 |
2 |
no |
no |
PF19012 |
A0A0R3UBA2 |
154-232 |
nD1 |
6-140,156-235 |
215 |
e3hnwB1 |
3HNW |
857.1.1 |
0.936 |
0.684 |
0.336 |
5.5|6.5|0 |
0.513 |
2.139 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Cell division protein ZapA-like |
Cell division protein ZapA-like |
Cell division protein ZapA-like |
3 |
0 |
no |
no |
PF19015 |
A0A077RD21 |
242-315 |
nD1 |
51-215,251-290 |
205 |
e3n7xA1 |
3N7X |
10.2.1 |
0.891 |
0.0 |
0.0 |
12.3|12.3|1 |
0.821 |
0.886 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
1 |
12 |
no |
no |
PF19015 |
A0A068Y306 |
242-315 |
nD1 |
51-215,246-290 |
210 |
e3n7xA1 |
3N7X |
10.2.1 |
0.907 |
0.0 |
0.0 |
13.2|13.2|1 |
0.822 |
0.907 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Nucleoplasmin-like/VP (viral coat and capsid proteins) |
1 |
12 |
no |
no |
PF19042 |
Q38BU6 |
90-997 |
nD4 |
836-1000 |
165 |
e4l8iA1 |
4L8I |
310.2.1 |
0.876 |
0.0 |
0.0 |
5.6|5.6|1 |
0.792 |
0.897 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
5 |
1 |
no |
no |
PF19052 |
A0A1L8GMN5 |
317-764 |
nD3 |
291-420 |
130 |
e5xnsA1 |
5XNS |
3922.1.1 |
0.854 |
0.0 |
0.0 |
6.2|6.4|0 |
0.692 |
1.008 |
pymol |
more |
good_domain |
alpha bundles |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
Helical domain in structural maintenance of chromosomes protein 3 |
4 |
1 |
yes:out |
no |
PF19054 |
S3B4Q2 |
17-191 |
nD1 |
1-195 |
195 |
e5boxC1 |
5BOX |
300.1.1 |
0.925 |
0.625 |
0.066 |
9.1|10.6|1 |
0.832 |
1.04 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
8 |
8 |
no |
yes:1 |
PF19054 |
A0A1S6RPN2 |
27-190 |
nD1 |
1-195 |
195 |
e5boxC1 |
5BOX |
300.1.1 |
0.92 |
0.588 |
0.0 |
8.9|10.4|1 |
0.853 |
1.04 |
pymol |
more |
good_domain |
a+b three layers |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
Phospholipase D/nuclease |
8 |
8 |
no |
no |
PF19056 |
A0A287DC14 |
492-980 |
nD4 |
456-825,936-980 |
415 |
e4a2lE6 |
4A2L |
5.1.4 |
0.946 |
0.0 |
0.992 |
24.2|30.1|0 |
0.94 |
1.156 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
28 |
no |
no |
PF19063 |
A0A6C0EC46 |
3-72 |
nD1 |
6-90 |
85 |
e1ug8A1 |
1UG8 |
320.1.1 |
0.941 |
0.0 |
0.0 |
6.6|6.6|0 |
0.865 |
1.133 |
pymol |
more |
good_domain |
a+b two layers |
R3H domain-like |
R3H domain |
R3H domain |
2 |
3 |
no |
no |
PF19064 |
A0A6C0CHK9 |
28-113 |
nD1 |
6-65 |
60 |
e3mudA2 |
3MUD |
3939.1.1 |
0.901 |
0.427 |
0.0 |
4.1|4.1|1 |
0.828 |
1.0 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
1 |
2 |
no |
no |
PF19064 |
A0A6C0IHP5 |
27-113 |
nD1 |
6-65 |
60 |
e3mudA2 |
3MUD |
3939.1.1 |
0.902 |
0.391 |
0.0 |
2.9|2.9|1 |
0.793 |
1.0 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
XRCC4 C-terminal oligomerization domain |
1 |
2 |
no |
no |
PF19069 |
A0A369R210 |
30-120 |
nD1 |
1-235 |
235 |
e7e4gA1 |
7E4G |
5001.1.1 |
0.879 |
0.0 |
0.0 |
9.5|10.6|1 |
0.814 |
0.823 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
8 |
2 |
no |
yes:6 |
PF19069 |
A0A1I3YRR1 |
32-122 |
nD1 |
1-245 |
245 |
e6qzhA2 |
6QZH |
5001.1.1 |
0.855 |
0.0 |
0.061 |
5.8|9.5|1 |
0.785 |
0.858 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
8 |
2 |
yes:in |
yes:5 |
PF19071 |
L8GRE8 |
590-675 |
nD3 |
536-650 |
115 |
e4kisA2 |
4KIS |
375.1.9 |
0.91 |
0.0 |
0.0 |
4.9|5.0|0 |
0.797 |
0.581 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Zinc-nucleated domain of serine integrase |
3 |
0 |
no |
yes:out |
PF19075 |
A0A6C0DAI7 |
48-112 |
nD2 |
41-115 |
75 |
e4p3zA3 |
4P3Z |
532.2.1 |
0.897 |
0.0 |
0.0 |
5.6|6.8|0 |
0.877 |
0.758 |
pymol |
more |
good_domain |
alpha arrays |
Type III secretion system domain-like |
Type III secretion system domains |
Type III secretion system domains |
3 |
0 |
no |
no |
PF19079 |
D0BJK5 |
811-852 |
nD7 |
491-525,531-560,566-600,606-635,641-775,781-855 |
340 |
e5fwwA1 |
5FWW |
5.1.3 |
0.949 |
0.0 |
0.0 |
4.1|6.3|0 |
0.337 |
0.983 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
0 |
30 |
no |
yes:out |
PF19089 |
A0A1H9LEA4 |
43-297 |
nD1 |
41-295 |
255 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.936 |
0.989 |
0.994 |
16.1|16.9|0 |
0.743 |
1.441 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
4 |
11 |
yes:out |
no |
PF19089 |
A0A2W1MXF4 |
29-281 |
nD1 |
26-283 |
258 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.896 |
0.992 |
0.997 |
16.0|17.0|0 |
0.769 |
1.458 |
pymol |
na |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
2 |
12 |
yes:out |
no |
PF19089 |
A0A661Z148 |
14-255 |
nD1 |
11-255 |
245 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.925 |
0.986 |
0.993 |
16.8|17.3|0 |
0.75 |
1.384 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
3 |
11 |
no |
no |
PF19090 |
A0A1I0QFG1 |
5-132 |
nD1 |
6-138 |
133 |
e2ko1B1 |
2KO1 |
304.8.1 |
0.941 |
0.0 |
0.0 |
7.1|7.2|0 |
0.982 |
1.583 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
3 |
7 |
no |
no |
PF19096 |
A0A1G9SKR2 |
2-328 |
nD1 |
6-110 |
105 |
e7aexA2 |
7AEX |
331.19.1 |
0.863 |
0.0 |
0.0 |
6.4|6.4|1 |
0.848 |
1.167 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Toxin RnlA N-terminal domains |
Toxin RnlA N-terminal domains |
2 |
6 |
no |
no |
PF19096 |
A0A1G9SKR2 |
2-328 |
nD2 |
111-335 |
225 |
e6wxxC2 |
6WXX |
2008.1.1 |
0.933 |
0.0 |
0.875 |
5.3|8.9|1 |
0.836 |
1.103 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
6 |
no |
no |
PF19096 |
A0A3P3RD17 |
2-326 |
nD1 |
6-110 |
105 |
e7aexA2 |
7AEX |
331.19.1 |
0.872 |
0.0 |
0.0 |
6.9|6.9|1 |
0.86 |
1.167 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Toxin RnlA N-terminal domains |
Toxin RnlA N-terminal domains |
2 |
6 |
no |
no |
PF19096 |
A0A3P3RD17 |
2-326 |
nD2 |
111-334 |
224 |
e4g6vG1 |
4G6V |
2008.1.1 |
0.931 |
0.497 |
0.712 |
8.8|8.8|1 |
0.948 |
1.098 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
8 |
6 |
no |
no |
PF19101 |
A0A7D5IAN8 |
9-131 |
nD1 |
11-140 |
130 |
e5ynxB1 |
5YNX |
622.4.1 |
0.86 |
0.0 |
0.0 |
6.6|6.6|1 |
0.817 |
1.221 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
Mite allergen Der p 5-related |
Mite allergen Der p 5-related |
5 |
3 |
no |
no |
PF19101 |
A0A139CR16 |
9-131 |
nD1 |
11-140 |
130 |
e5ynxB1 |
5YNX |
622.4.1 |
0.86 |
0.0 |
0.0 |
6.6|6.6|1 |
0.817 |
1.221 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
Mite allergen Der p 5-related |
Mite allergen Der p 5-related |
5 |
3 |
no |
no |
PF19103 |
A0A1G8WJI2 |
1-126 |
nD1 |
6-130 |
125 |
e1quuA1 |
1QUU |
604.1.1 |
0.899 |
0.0 |
0.296 |
9.3|9.3|1 |
0.906 |
1.136 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
no |
PF19106 |
F7PIG9 |
1-142 |
nD1 |
6-135 |
130 |
e1feuD1 |
1FEU |
239.1.1 |
0.871 |
0.0 |
0.0 |
3.5|3.5|1 |
0.778 |
1.171 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
4 |
9 |
no |
no |
PF19107 |
G0QDB8 |
83-203 |
nD1 |
11-225 |
215 |
e5lilA4 |
5LIL |
1075.1.2 |
0.893 |
0.0 |
0.0 |
4.7|4.7|1 |
0.723 |
1.126 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
MacB transmembrane domain |
9 |
2 |
no |
yes:8 |
PF19107 |
A0A1D8MR64 |
79-199 |
nD1 |
6-220 |
215 |
e5lilA4 |
5LIL |
1075.1.2 |
0.883 |
0.0 |
0.0 |
5.6|5.6|1 |
0.701 |
1.126 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
MacB transmembrane domain |
9 |
4 |
no |
yes:8 |
PF19108 |
A0A346PSF1 |
1-74 |
nD1 |
11-75 |
65 |
e2gu3A2 |
2GU3 |
243.3.1 |
0.937 |
0.0 |
0.0 |
5.0|5.0|1 |
0.857 |
0.65 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
5 |
no |
no |
PF19108 |
A0A256HFI8 |
1-73 |
nD1 |
11-73 |
63 |
e2gu3A1 |
2GU3 |
243.3.1 |
0.921 |
0.0 |
0.0 |
4.8|4.8|1 |
0.901 |
0.63 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
1 |
5 |
no |
no |
PF19113 |
I3R4V3 |
1-146 |
nD1 |
6-75,111-148 |
108 |
e2lk2A1 |
2LK2 |
101.1.1 |
0.859 |
0.0 |
0.0 |
2.3|3.7|0 |
0.888 |
1.479 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
5 |
2 |
no |
no |
PF19116 |
A0A437GUU8 |
316-494 |
nD3 |
321-510 |
190 |
e6x5vA3 |
6X5V |
11.1.1 |
0.904 |
0.0 |
0.091 |
5.1|5.1|1 |
0.923 |
1.759 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
10 |
no |
no |
PF19116 |
D0X9Y6 |
367-511 |
nD4 |
371-534,561-570 |
174 |
e7a7db3 |
7A7D |
11.1.1 |
0.918 |
0.0 |
0.225 |
5.0|6.9|1 |
0.951 |
1.611 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
12 |
no |
no |
PF19122 |
A0A498H4V9 |
6-150 |
nD1 |
16-125 |
110 |
e4ldzA2 |
4LDZ |
101.1.3 |
0.936 |
0.334 |
0.0 |
4.9|4.9|1 |
0.97 |
1.606 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, LuxR-like |
5 |
0 |
no |
no |
PF19123 |
A0A2R6CUN1 |
35-139 |
nD1 |
1-75,97-140 |
119 |
e5dqzF1 |
5DQZ |
304.56.1 |
0.884 |
0.0 |
0.0 |
4.0|4.0|1 |
0.873 |
1.28 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR associated protein Cas2-like |
CRISPR associated protein Cas2-like |
3 |
5 |
no |
no |
PF19129 |
M0MRM8 |
3-142 |
nD1 |
1-65 |
65 |
e2r7dA1 |
2R7D |
2.1.1 |
0.945 |
0.0 |
0.486 |
5.3|7.1|0 |
0.977 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
5 |
no |
no |
PF19129 |
A0A1D2QIE7 |
4-143 |
nD1 |
1-70 |
70 |
e2r7dA1 |
2R7D |
2.1.1 |
0.94 |
0.0 |
0.501 |
5.1|7.2|0 |
0.975 |
0.673 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
5 |
no |
no |
PF19129 |
A0A161XQ36 |
4-143 |
nD1 |
6-70 |
65 |
e4gnxX1 |
4GNX |
2.1.1 |
0.943 |
0.0 |
0.502 |
6.7|7.2|0 |
0.786 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
0 |
5 |
no |
no |
PF19130 |
A0A1H3Y5H6 |
14-154 |
nD1 |
6-150 |
145 |
e3epuA1 |
3EPU |
241.1.1 |
0.92 |
0.0 |
0.0 |
8.0|8.8|1 |
0.899 |
1.09 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
4 |
6 |
no |
no |
PF19130 |
A0A151AFC7 |
10-149 |
nD1 |
1-150 |
150 |
e3cxjA1 |
3CXJ |
241.1.1 |
0.935 |
0.0 |
0.0 |
7.8|8.9|1 |
0.926 |
1.128 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
5 |
6 |
no |
no |
PF19132 |
A0A3P3RFM5 |
14-166 |
nD1 |
16-165 |
150 |
e2p22C1 |
2P22 |
192.15.1 |
0.891 |
0.793 |
0.91 |
3.7|5.0|0 |
0.56 |
1.395 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
6 |
5 |
no |
no |
PF19132 |
A0A7J4US29 |
6-159 |
nD1 |
6-160 |
155 |
e3ktwB1 |
3KTW |
101.1.9 |
0.899 |
0.0 |
0.0 |
3.5|3.7|0 |
0.904 |
1.771 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
6 |
5 |
yes:in |
no |
PF19134 |
U1P7Q2 |
33-83 |
nD1 |
1-70 |
70 |
e1gh9A1 |
1GH9 |
375.1.3 |
0.863 |
0.997 |
0.997 |
3.4|3.6|0 |
0.704 |
0.986 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Hypothetical protein MTH1184 |
2 |
5 |
no |
no |
PF19134 |
A0A830FJE7 |
32-81 |
nD1 |
1-85 |
85 |
e2gpfA2 |
2GPF |
4076.2.1 |
0.852 |
0.0 |
0.0 |
4.0|4.0|1 |
0.907 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
L9 N-domain-like |
MbtH-like |
MbtH-like |
3 |
4 |
no |
no |
PF19135 |
A0A257G909 |
8-62 |
nD1 |
1-75 |
75 |
e4gnxX1 |
4GNX |
2.1.1 |
0.944 |
0.943 |
0.966 |
6.7|7.6|0 |
0.846 |
0.721 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
5 |
no |
yes:out |
PF19141 |
A0A6C0BB54 |
4-126 |
nD1 |
13-29,52-145 |
111 |
e7plo61 |
7PLO |
148.1.3 |
0.894 |
0.0 |
0.0 |
2.4|3.0|1 |
0.764 |
1.194 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
6 |
0 |
no |
no |
PF19145 |
A0A2R6F6F4 |
1-87 |
nD1 |
16-85 |
70 |
e2ch0A1 |
2CH0 |
101.1.4 |
0.925 |
0.0 |
0.0 |
2.1|6.7|0 |
0.846 |
0.897 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
2 |
3 |
no |
no |
PF19145 |
A0A2R6JZ47 |
1-87 |
nD1 |
16-85 |
70 |
e5u8oB2 |
5U8O |
101.1.2 |
0.922 |
0.0 |
0.344 |
5.9|6.8|0 |
0.888 |
0.737 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
2 |
3 |
no |
no |
PF19145 |
A0A2R6DJX2 |
1-87 |
nD1 |
16-85 |
70 |
e5u8oB2 |
5U8O |
101.1.2 |
0.945 |
0.0 |
0.34 |
6.0|6.8|0 |
0.907 |
0.737 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
2 |
3 |
no |
no |
PF19150 |
A0A2E3BYC9 |
43-122 |
nD1 |
21-80 |
60 |
e2mheA1 |
2MHE |
304.14.1 |
0.896 |
0.76 |
0.743 |
4.3|4.3|1 |
0.816 |
0.779 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Sporulation related repeat (SPOR) |
Sporulation related repeat (SPOR) |
1 |
3 |
no |
no |
PF19157 |
A0A0R2BD66 |
13-105 |
nD1 |
16-125 |
110 |
e6dcrA3 |
6DCR |
3430.1.1 |
0.934 |
0.833 |
0.434 |
7.0|7.0|1 |
0.69 |
0.973 |
pymol |
more |
good_domain |
a+b complex topology |
Primosome assembly protein PriA 3' DNA-binding domain |
Primosome assembly protein PriA 3' DNA-binding domain |
Primosome assembly protein PriA 3' DNA-binding domain |
2 |
6 |
no |
no |
PF19165 |
A0A6C0LTI7 |
7-404 |
nD1 |
6-260,286-404 |
374 |
e6egcA1 |
6EGC |
192.29.1 |
0.926 |
0.0 |
0.0 |
11.4|11.4|1 |
0.874 |
4.921 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
12 |
11 |
no |
no |
PF19177 |
L8GVY1 |
42-204 |
nD1 |
36-205 |
170 |
e3emmA1 |
3EMM |
9.1.1 |
0.942 |
0.0 |
0.0 |
11.9|11.9|1 |
0.97 |
1.111 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
1 |
10 |
yes:out |
no |
PF19197 |
A0A1C5I6K7 |
8-110 |
nD2 |
51-183 |
133 |
e4c8sB2 |
4C8S |
109.40.1 |
0.857 |
0.0 |
0.0 |
6.2|6.2|1 |
0.723 |
0.905 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
DNA polymerase alpha-binding protein Ctf4 C-terminal domain |
DNA polymerase alpha-binding protein Ctf4 C-terminal domain |
6 |
0 |
no |
no |
PF19230 |
A0A6C0CZ23 |
37-145 |
nD1 |
6-150 |
145 |
e1g8xB6 |
1G8X |
604.1.1 |
0.94 |
0.0 |
0.0 |
6.3|6.5|1 |
0.94 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
5 |
1 |
no |
yes:3 |
PF19230 |
A0A6C0END2 |
31-146 |
nD1 |
6-30,46-149 |
129 |
e3uumB2 |
3UUM |
604.1.1 |
0.91 |
0.0 |
0.0 |
6.1|6.1|1 |
0.883 |
1.173 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
yes:3 |
PF19230 |
A0A6C0LEN7 |
28-142 |
nD1 |
1-25,36-145 |
135 |
e6xf1A1 |
6XF1 |
604.1.1 |
0.854 |
0.0 |
0.0 |
6.3|7.3|0 |
0.869 |
1.227 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
yes:3 |
PF19247 |
A0A433UGF7 |
57-206 |
nD1 |
73-290 |
218 |
e2a1kB1 |
2A1K |
2.1.1 |
0.909 |
0.0 |
0.0 |
5.0|5.0|1 |
0.937 |
2.096 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
4 |
10 |
no |
no |
PF19247 |
G5J4P7 |
17-177 |
nD1 |
23-285 |
263 |
e2a1kB1 |
2A1K |
2.1.1 |
0.899 |
0.0 |
0.0 |
4.4|4.4|1 |
0.949 |
2.529 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
6 |
13 |
no |
no |
PF19247 |
A0A3C1YD60 |
8-153 |
nD1 |
6-250 |
245 |
e2a1kB1 |
2A1K |
2.1.1 |
0.896 |
0.0 |
0.0 |
4.8|4.8|1 |
0.912 |
2.356 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
11 |
no |
no |
PF19256 |
A7USF0 |
712-779 |
nD2 |
406-500,716-750 |
130 |
e3hhjB1 |
3HHJ |
221.4.1 |
0.851 |
0.0 |
0.0 |
7.4|7.5|1 |
0.716 |
0.844 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
4 |
7 |
no |
no |
PF19257 |
A0A7J7TRW7 |
21-100 |
nD1 |
26-230,371-405 |
240 |
e5lf8A1 |
5LF8 |
221.4.1 |
0.91 |
0.0 |
0.233 |
7.2|7.8|1 |
0.897 |
1.558 |
pymol |
more |
good_domain |
a+b two layers |
beta-Grasp |
Nudix |
Nudix |
8 |
12 |
no |
yes:out |
PF19268 |
A0A1H4BJR1 |
2-565 |
nD2 |
111-275 |
165 |
e6jcxF1 |
6JCX |
142.1.1 |
0.908 |
0.0 |
0.0 |
4.8|4.8|1 |
0.833 |
1.728 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
8 |
1 |
no |
no |
PF19270 |
A0A067GLL2 |
43-253 |
nD2 |
61-185,216-250 |
160 |
e4ggtB1 |
4GGT |
9.2.1 |
0.854 |
0.0 |
0.0 |
8.4|8.4|1 |
0.872 |
1.231 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Avidin/Streptavidin |
Avidin/Streptavidin |
2 |
8 |
no |
no |
PF19270 |
A0A7N2RB05 |
43-253 |
nD2 |
61-185,208-240 |
158 |
e4ggtB1 |
4GGT |
9.2.1 |
0.855 |
0.0 |
0.0 |
8.4|8.4|1 |
0.891 |
1.215 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Avidin/Streptavidin |
Avidin/Streptavidin |
2 |
8 |
no |
no |
PF19287 |
A0A1L9VKE7 |
24-157 |
nD1 |
1-150 |
150 |
e3q9oA1 |
3Q9O |
237.1.1 |
0.927 |
0.116 |
0.211 |
7.0|7.3|1 |
0.565 |
0.735 |
pymol |
more |
good_domain |
a+b complex topology |
ADP-ribosylation |
ADP-ribosylation |
ADP-ribosylation |
5 |
7 |
no |
no |
PF19291 |
A0A1M6X5X0 |
74-282 |
nD2 |
86-410 |
325 |
e7kmqA2 |
7KMQ |
12.3.1 |
0.929 |
0.979 |
0.998 |
11.4|15.8|1 |
0.851 |
1.157 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
6 |
17 |
no |
no |
PF19306 |
A0A7T5R7M8 |
413-556 |
nD4 |
506-555 |
50 |
e3aiiA4 |
3AII |
239.1.1 |
0.941 |
0.0 |
0.0 |
5.4|5.4|1 |
0.775 |
0.45 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
5 |
no |
no |
PF19306 |
O27830 |
421-565 |
nD3 |
516-565 |
50 |
e3aiiA4 |
3AII |
239.1.1 |
0.862 |
0.0 |
0.0 |
5.2|5.2|1 |
0.777 |
0.45 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
5 |
no |
no |
PF19306 |
Q57742 |
413-553 |
nD3 |
501-555 |
55 |
e3aiiA4 |
3AII |
239.1.1 |
0.908 |
0.0 |
0.0 |
5.2|5.2|1 |
0.837 |
0.495 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
5 |
no |
no |
PF19312 |
A0A160UIJ7 |
9-277 |
nD1 |
1-110,246-345 |
210 |
e4iloB5 |
4ILO |
3755.3.1 |
0.937 |
0.0 |
0.0 |
7.8|7.8|1 |
0.65 |
1.221 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
6 |
0 |
yes:in |
yes:3 |
PF19313 |
A0A1D9PAR5 |
230-804 |
nD2 |
231-800 |
570 |
e6fokA1 |
6FOK |
5084.5.3 |
0.937 |
0.632 |
0.897 |
13.7|17.6|1 |
0.816 |
1.008 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
2 |
31 |
yes:out |
no |
PF19323 |
A0A3P8W2Y1 |
137-258 |
nD2 |
141-258 |
118 |
e6s4lA2 |
6S4L |
306.10.1 |
0.885 |
0.996 |
0.304 |
4.9|5.2|0 |
0.72 |
0.983 |
pymol |
more |
good_domain |
a+b two layers |
Glucose permease domain IIB-like |
H1 domain of KCTD12 |
H1 domain of KCTD12 |
3 |
9 |
no |
no |
PF19343 |
Q7SB48 |
7-633 |
nD4 |
36-105,371-400,456-490,796-810 |
150 |
e3mxzA1 |
3MXZ |
604.7.1 |
0.915 |
0.0 |
0.0 |
4.9|4.9|1 |
0.638 |
1.429 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Tubulin chaperone cofactor A |
Tubulin chaperone cofactor A |
6 |
1 |
no |
no |
PF19343 |
A0A175W7J6 |
6-632 |
nD5 |
311-345,401-455 |
90 |
e5mpsR1 |
5MPS |
6026.1.1 |
0.921 |
0.0 |
0.0 |
5.1|5.1|1 |
0.617 |
1.023 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
cwf21 domain |
cwf21 domain |
cwf21 domain |
4 |
1 |
no |
no |
PF19354 |
D7CET9 |
8-182 |
nD1 |
16-170 |
155 |
e1sj8A1 |
1SJ8 |
601.1.2 |
0.881 |
0.0 |
0.0 |
8.8|9.1|0 |
0.863 |
0.939 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
5 |
0 |
no |
yes:5 |
PF19361 |
A0A209CC47 |
1-274 |
nD1 |
1-270,276-368 |
363 |
e7dvnA1 |
7DVN |
101.1.2 |
0.945 |
0.969 |
0.99 |
6.7|12.6|1 |
0.766 |
3.821 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
14 |
11 |
no |
no |
PF19363 |
A0A0Q6YUU2 |
1-281 |
nD2 |
136-265 |
130 |
e5sydB1 |
5SYD |
3156.1.1 |
0.876 |
0.756 |
0.268 |
5.0|5.0|1 |
0.633 |
0.884 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
3 |
9 |
no |
no |
PF19363 |
A0A0Q6SQD5 |
1-281 |
nD2 |
131-255 |
125 |
e5sydB1 |
5SYD |
3156.1.1 |
0.887 |
0.787 |
0.0 |
5.1|5.1|1 |
0.647 |
0.85 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
2 |
9 |
no |
no |
PF19363 |
I4YL88 |
1-280 |
nD2 |
71-115 |
45 |
e2gmgA3 |
2GMG |
375.1.1 |
0.931 |
0.969 |
0.955 |
0.0|2.4|0 |
0.824 |
0.804 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
5 |
no |
no |
PF19363 |
I4YL88 |
1-280 |
nD3 |
131-260 |
130 |
e5sydB1 |
5SYD |
3156.1.1 |
0.871 |
0.723 |
0.248 |
5.0|5.0|1 |
0.641 |
0.884 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
3 |
10 |
no |
no |
PF19365 |
A0A238Z0I5 |
1-204 |
nD1 |
1-195 |
195 |
e4mndA2 |
4MND |
3883.1.1 |
0.895 |
0.0 |
0.023 |
13.3|13.3|1 |
0.909 |
0.942 |
pymol |
more |
good_domain |
alpha bundles |
CDP-alcohol phosphotransferase helical bundle domain |
CDP-alcohol phosphotransferase helical bundle domain |
CDP-alcohol phosphotransferase helical bundle domain |
7 |
0 |
no |
yes:4 |
PF19365 |
A0A6J4RC79 |
2-199 |
nD1 |
1-195 |
195 |
e4mndA2 |
4MND |
3883.1.1 |
0.896 |
0.0 |
0.028 |
13.2|13.4|1 |
0.919 |
0.942 |
pymol |
more |
good_domain |
alpha bundles |
CDP-alcohol phosphotransferase helical bundle domain |
CDP-alcohol phosphotransferase helical bundle domain |
CDP-alcohol phosphotransferase helical bundle domain |
7 |
0 |
no |
yes:4 |
PF19377 |
A0A562STA1 |
1-91 |
nD1 |
1-90 |
90 |
e4baxE6 |
4BAX |
239.4.1 |
0.882 |
0.0 |
0.0 |
5.8|5.8|1 |
0.868 |
0.896 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Glutamine synthetase, N-terminal domain |
Glutamine synthetase, N-terminal domain |
1 |
6 |
no |
no |
PF19377 |
A0A1H7YHY9 |
1-91 |
nD1 |
1-85 |
85 |
e4baxE6 |
4BAX |
239.4.1 |
0.885 |
0.0 |
0.0 |
6.3|6.3|1 |
0.868 |
0.846 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Glutamine synthetase, N-terminal domain |
Glutamine synthetase, N-terminal domain |
1 |
6 |
no |
no |
PF19377 |
A0A1I5JZ28 |
1-89 |
nD1 |
1-90 |
90 |
e4baxE6 |
4BAX |
239.4.1 |
0.874 |
0.0 |
0.0 |
5.5|5.5|1 |
0.827 |
0.896 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Glutamine synthetase, N-terminal domain |
Glutamine synthetase, N-terminal domain |
0 |
7 |
no |
no |
PF19378 |
A0A250J2X3 |
21-252 |
nD1 |
6-250 |
245 |
e7dymB1 |
7DYM |
3925.1.1 |
0.943 |
0.986 |
0.982 |
14.0|14.0|1 |
0.845 |
1.025 |
pymol |
more |
good_domain |
a+b two layers |
hypothetical protein BPSL2088 |
hypothetical protein BPSL2088 |
hypothetical protein BPSL2088 |
7 |
10 |
no |
no |
PF19379 |
A0A6B2UYA3 |
21-320 |
nD1 |
6-15,41-130,178-220 |
143 |
e3nekB2 |
3NEK |
304.122.1 |
0.917 |
0.0 |
0.0 |
2.1|2.1|1 |
0.582 |
1.294 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Nitrogen repressor-like proteins |
Nitrogen repressor-like proteins |
6 |
5 |
no |
no |
PF19380 |
G8WV66 |
15-103 |
nD1 |
16-105 |
90 |
e2ip6A1 |
2IP6 |
633.2.1 |
0.917 |
0.0 |
0.0 |
8.7|8.7|1 |
0.919 |
0.918 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Carnobacteriocin B2 immunity protein |
Carnobacteriocin B2 immunity protein |
4 |
0 |
no |
no |
PF19380 |
A0A069JTX6 |
10-94 |
nD1 |
16-95 |
80 |
e2juaA1 |
2JUA |
605.1.1 |
0.938 |
0.0 |
0.0 |
9.3|9.6|0 |
0.765 |
1.096 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
4 |
0 |
no |
no |
PF19385 |
J4K781 |
9-91 |
nD1 |
6-95 |
90 |
e7btuA2 |
7BTU |
4312.2.1 |
0.879 |
0.0 |
0.0 |
4.5|4.7|0 |
0.838 |
1.146 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
YaeB-like |
YaeB-like |
3 |
5 |
no |
no |
PF19386 |
A0A519L5J0 |
8-75 |
nD1 |
6-75 |
70 |
e3egrA1 |
3EGR |
3115.5.1 |
0.857 |
0.0 |
0.0 |
5.3|5.3|1 |
0.774 |
1.111 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
phenylacetate-CoA oxygenase subunit PaaB |
phenylacetate-CoA oxygenase subunit PaaB |
1 |
5 |
no |
no |
PF19388 |
A0A0R1X044 |
15-95 |
nD1 |
6-90 |
85 |
e3udcG6 |
3UDC |
5058.1.1 |
0.85 |
0.0 |
0.0 |
4.6|4.6|1 |
0.609 |
0.881 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
2 |
3 |
no |
yes:2 |
PF19389 |
A0A0R1SBM8 |
36-94 |
nD1 |
1-94 |
94 |
e4dndA1 |
4DND |
603.1.1 |
0.941 |
0.0 |
0.0 |
9.6|10.5|1 |
0.977 |
0.895 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
yes:in |
yes:2 |
PF19394 |
A0A1B1CHW2 |
127-218 |
nD2 |
136-219 |
84 |
e7btuA2 |
7BTU |
4312.2.1 |
0.903 |
0.0 |
0.0 |
5.4|7.1|0 |
0.838 |
1.07 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
YaeB-like |
YaeB-like |
3 |
5 |
no |
no |
PF19394 |
A0A1V2QAP7 |
152-235 |
nD2 |
151-235 |
85 |
e4nrnB1 |
4NRN |
4312.1.1 |
0.855 |
0.0 |
0.0 |
5.6|5.6|0 |
0.838 |
0.939 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
2 |
5 |
no |
no |
PF19394 |
F2IY42 |
121-214 |
nD2 |
131-214 |
84 |
e4nrnB1 |
4NRN |
4312.1.1 |
0.924 |
0.0 |
0.0 |
6.7|7.5|1 |
0.886 |
0.928 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
5 |
no |
no |
PF19400 |
A0A1I1FWN1 |
1-127 |
nD1 |
6-125 |
120 |
e1jyhA1 |
1JYH |
886.1.1 |
0.892 |
0.547 |
0.0 |
6.4|6.4|1 |
0.682 |
0.759 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Probable bacterial effector-binding domain |
Probable bacterial effector-binding domain |
Probable bacterial effector-binding domain |
3 |
5 |
no |
no |
PF19412 |
I0XQ15 |
41-104 |
nD2 |
26-150,221-265,286-504 |
389 |
e4c00A4 |
4C00 |
5084.5.1 |
0.898 |
0.998 |
0.999 |
27.8|27.8|1 |
0.965 |
1.057 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
4 |
17 |
yes:out |
no |
PF19412 |
A0A2P2E012 |
31-94 |
nD2 |
16-25,56-498 |
453 |
e4ql0A3 |
4QL0 |
5084.5.1 |
0.944 |
0.998 |
0.999 |
24.0|27.5|1 |
0.912 |
1.231 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
6 |
21 |
yes:in |
no |
PF19412 |
A0A2P2E428 |
1-60 |
nD1 |
11-150,171-459 |
429 |
e5d0oA5 |
5D0O |
5084.5.1 |
0.912 |
0.998 |
0.999 |
25.8|27.9|1 |
0.898 |
1.166 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
5 |
23 |
no |
no |
PF19413 |
A0A4Q5PH74 |
4-177 |
nD1 |
1-233 |
233 |
e6gieA1 |
6GIE |
5084.1.1 |
0.915 |
0.985 |
0.987 |
19.5|19.5|1 |
0.748 |
1.316 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
0 |
14 |
no |
no |
PF19413 |
A0A1Q7V758 |
4-179 |
nD1 |
6-234 |
229 |
e6gieA1 |
6GIE |
5084.1.1 |
0.913 |
0.982 |
0.986 |
19.5|19.5|1 |
0.74 |
1.294 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
0 |
14 |
no |
no |
PF19419 |
A0A0H3JCV6 |
3-163 |
nD2 |
66-149 |
84 |
e3htsB1 |
3HTS |
101.1.2 |
0.872 |
0.0 |
0.0 |
3.4|3.4|1 |
0.69 |
0.884 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
6 |
4 |
no |
no |
PF19419 |
A0A097QYR8 |
2-163 |
nD2 |
66-149 |
84 |
e3htsB1 |
3HTS |
101.1.2 |
0.863 |
0.0 |
0.0 |
3.3|3.3|1 |
0.685 |
0.884 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
6 |
4 |
no |
no |
PF19419 |
A0A0L7T3K6 |
2-163 |
nD2 |
66-149 |
84 |
e3pkvA1 |
3PKV |
211.1.1 |
0.917 |
0.0 |
0.0 |
2.4|2.4|0 |
0.857 |
1.235 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
4 |
4 |
no |
no |
PF19421 |
A0A1D2N0V0 |
178-883 |
nD3 |
591-640,666-750,856-880 |
160 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.905 |
0.0 |
0.0 |
7.6|9.2|0 |
0.504 |
2.712 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
5 |
0 |
no |
no |
PF19421 |
A0A0J9YVH0 |
314-1016 |
nD2 |
676-855,971-1005 |
215 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.925 |
0.0 |
0.0 |
7.5|7.5|1 |
0.602 |
3.644 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
7 |
1 |
no |
no |
PF19431 |
A0A6A4WB49 |
25-1134 |
nD4 |
421-460,511-615 |
145 |
e1ge9A2 |
1GE9 |
310.2.1 |
0.911 |
0.0 |
0.0 |
9.1|9.1|1 |
0.696 |
0.788 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
Ribosome recycling factor, RRF |
Ribosome recycling factor, RRF |
5 |
0 |
no |
no |
PF19431 |
A0A851C0P1 |
1-1214 |
nD2 |
241-255,291-365,481-515,551-780,881-890,926-1080 |
520 |
e5t9rG2 |
5T9R |
109.4.1 |
0.944 |
0.0 |
0.283 |
9.6|10.1|1 |
0.585 |
1.818 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
19 |
0 |
no |
no |
PF19437 |
A0A2G8K2C1 |
4-171 |
nD1 |
16-70 |
55 |
e4btsB61 |
4BTS |
375.1.1 |
0.946 |
0.0 |
0.835 |
3.7|3.9|1 |
0.745 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
4 |
no |
no |
PF19437 |
A0A8B6HEK2 |
4-172 |
nD1 |
11-70 |
60 |
e4btsB61 |
4BTS |
375.1.1 |
0.927 |
0.0 |
0.873 |
3.7|3.7|1 |
0.834 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
4 |
no |
no |
PF19441 |
O75129 |
148-692 |
nD3 |
511-554 |
44 |
e3v65D4 |
3V65 |
389.1.1 |
0.949 |
0.779 |
0.774 |
0.0|2.8|0 |
0.824 |
1.035 |
pymol |
more |
good_domain |
few secondary structure elements |
EGF-like |
EGF-related |
EGF/Laminin |
0 |
4 |
yes:out |
yes:out |
PF19443 |
A0A7Z0VMZ1 |
34-246 |
nD1 |
36-130,201-240 |
135 |
e6egcA1 |
6EGC |
192.29.1 |
0.947 |
0.0 |
0.0 |
13.6|13.6|1 |
0.877 |
1.776 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:out |
PF19443 |
A0A1Z5HB25 |
29-246 |
nD1 |
31-130,211-240 |
130 |
e4p9tD2 |
4P9T |
601.1.1 |
0.908 |
0.0 |
0.0 |
11.3|11.3|1 |
0.833 |
0.992 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
5 |
0 |
yes:out |
yes:out |
PF19443 |
A0A1Z5HB25 |
29-246 |
nD3 |
131-210 |
80 |
e7m5tA1 |
7M5T |
604.1.1 |
0.925 |
0.581 |
0.581 |
7.6|7.6|1 |
0.74 |
0.727 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
yes:out |
yes:out |
PF19446 |
A0A4Y9T289 |
2-251 |
nD1 |
1-205,221-255 |
240 |
e5m21H1 |
5M21 |
295.1.1 |
0.925 |
0.288 |
0.525 |
4.5|6.8|1 |
0.785 |
1.967 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
8 |
8 |
no |
no |
PF19447 |
A0A0Q7Q1H5 |
1-86 |
nD1 |
1-80 |
80 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.867 |
0.0 |
0.0 |
9.6|9.6|1 |
0.868 |
0.8 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF19447 |
A0A1M3N713 |
7-84 |
nD1 |
6-85 |
80 |
e7ar8K1 |
7AR8 |
3843.1.1 |
0.861 |
0.0 |
0.0 |
9.5|9.5|1 |
0.857 |
0.8 |
pymol |
more |
good_domain |
alpha complex topology |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
NADH-quinone oxidoreductase subunit K |
3 |
0 |
no |
yes:3 |
PF19448 |
A0A1Y0IN83 |
4-243 |
nD1 |
6-114,141-198 |
167 |
e1dmuA1 |
1DMU |
2008.1.1 |
0.938 |
0.0 |
0.113 |
3.9|4.4|1 |
0.67 |
0.819 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
6 |
no |
no |
PF19448 |
A0A1I4MPM3 |
2-235 |
nD1 |
6-115,141-195 |
165 |
e2ezvA1 |
2EZV |
2008.1.1 |
0.933 |
0.0 |
0.097 |
4.9|4.9|1 |
0.71 |
0.809 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
6 |
6 |
no |
no |
PF19448 |
R6Q2I2 |
5-247 |
nD1 |
6-204 |
199 |
e2ezvA1 |
2EZV |
2008.1.1 |
0.86 |
0.0 |
0.085 |
4.5|5.1|0 |
0.728 |
0.975 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
6 |
6 |
no |
no |
PF19452 |
A0A3N9XXT2 |
1-146 |
nD1 |
1-145 |
145 |
e4jg5A1 |
4JG5 |
11.1.4 |
0.908 |
0.0 |
0.0 |
4.4|5.5|1 |
0.754 |
1.16 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
3 |
10 |
no |
no |
PF19452 |
A0A3N9X506 |
1-146 |
nD1 |
1-145 |
145 |
e4jg5A1 |
4JG5 |
11.1.4 |
0.913 |
0.0 |
0.0 |
4.7|5.1|1 |
0.761 |
1.16 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
3 |
10 |
no |
no |
PF19453 |
A0A0L6JJJ7 |
247-359 |
nD2 |
246-360 |
115 |
e1pbyA1 |
1PBY |
9.3.1 |
0.877 |
0.0 |
0.0 |
7.2|7.2|1 |
0.826 |
0.943 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
Quinohemoprotein amine dehydrogenase A chain, domain 3-like |
1 |
7 |
yes:out |
no |
PF19460 |
A0A255H400 |
1-108 |
nD1 |
1-110 |
110 |
e3gpvB1 |
3GPV |
101.1.9 |
0.892 |
0.322 |
0.77 |
2.2|3.7|0 |
0.563 |
1.257 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
7 |
2 |
no |
no |
PF19460 |
A0A644YNV3 |
1-108 |
nD1 |
1-110 |
110 |
e3vvxA1 |
3VVX |
101.1.1 |
0.87 |
0.487 |
0.91 |
3.0|3.9|1 |
0.717 |
1.507 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
7 |
2 |
no |
no |
PF19460 |
A0A181ZEF8 |
1-108 |
nD2 |
31-120 |
90 |
e5crlB1 |
5CRL |
101.1.9 |
0.949 |
0.0 |
0.758 |
3.1|3.5|0 |
0.584 |
1.029 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
6 |
2 |
yes:out |
no |
PF19466 |
A0A2P8QFY2 |
1-139 |
nD2 |
91-140 |
50 |
e7nfuA2 |
7NFU |
101.1.1 |
0.914 |
0.0 |
0.698 |
5.4|6.9|0 |
0.841 |
0.685 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF19466 |
A0A286CUB9 |
1-139 |
nD2 |
86-140 |
55 |
e1vz0B1 |
1VZ0 |
101.1.1 |
0.911 |
0.0 |
0.705 |
5.8|6.9|0 |
0.855 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF19466 |
A0A0N0AE75 |
1-139 |
nD2 |
91-140 |
50 |
e1vz0B1 |
1VZ0 |
101.1.1 |
0.872 |
0.236 |
0.691 |
5.9|6.8|0 |
0.849 |
0.685 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
4 |
0 |
no |
no |
PF19467 |
A0A385AYX2 |
2-398 |
nD2 |
221-395 |
175 |
e3gp6A1 |
3GP6 |
5084.1.1 |
0.872 |
0.0 |
0.0 |
6.7|6.7|1 |
0.906 |
0.989 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
2 |
11 |
no |
no |
PF19467 |
K0EZT1 |
1-400 |
nD2 |
221-395 |
175 |
e3gp6A1 |
3GP6 |
5084.1.1 |
0.88 |
0.0 |
0.0 |
7.8|10.6|1 |
0.904 |
0.989 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
3 |
11 |
no |
no |
PF19467 |
A0A0D4DGU7 |
1-400 |
nD2 |
221-395 |
175 |
e2x27X1 |
2X27 |
5084.1.1 |
0.899 |
0.0 |
0.0 |
7.6|7.6|1 |
0.859 |
0.989 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
3 |
11 |
no |
no |
PF19468 |
C2NGH3 |
1-313 |
nD2 |
16-30,166-318 |
168 |
e3o1jB3 |
3O1J |
601.4.1 |
0.94 |
0.0 |
0.0 |
8.1|8.3|0 |
0.964 |
1.167 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
Histidine kinase associated sensor domains |
Histidine kinase associated sensor domains |
6 |
0 |
no |
no |
PF19469 |
A0A2D0HCE1 |
1-142 |
nD1 |
31-143 |
113 |
e2qmiB3 |
2QMI |
9.4.1 |
0.872 |
0.0 |
0.0 |
8.9|10.1|0 |
0.914 |
1.171 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
0 |
10 |
yes:out |
no |
PF19475 |
A0A6W0IV89 |
1-202 |
nD1 |
1-109,131-173 |
152 |
e4aefA1 |
4AEF |
11.1.1 |
0.942 |
0.0 |
0.0 |
3.6|4.1|0 |
0.949 |
1.407 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
11 |
no |
no |
PF19475 |
A0A756JSB7 |
1-202 |
nD1 |
1-105,143-200 |
163 |
e4aefA1 |
4AEF |
11.1.1 |
0.933 |
0.0 |
0.0 |
3.6|3.9|1 |
0.973 |
1.509 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
11 |
no |
no |
PF19475 |
A0A5S4SXW3 |
1-203 |
nD1 |
1-115,143-173 |
146 |
e4aefA1 |
4AEF |
11.1.1 |
0.935 |
0.0 |
0.0 |
3.4|3.8|1 |
0.944 |
1.352 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
11 |
no |
no |
PF19487 |
A0A2T0S6F9 |
1-150 |
nD1 |
36-150 |
115 |
e5gu5A1 |
5GU5 |
10.1.2 |
0.946 |
0.0 |
0.0 |
7.6|8.0|0 |
0.91 |
0.732 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
8 |
yes:out |
no |
PF19488 |
A0A085G743 |
1-292 |
nD2 |
206-290 |
85 |
e2x8uB1 |
2X8U |
3016.1.1 |
0.923 |
0.995 |
0.978 |
4.3|4.6|0 |
0.703 |
0.766 |
pymol |
more |
good_domain |
a+b two layers |
C-terminal domain in some PLP-dependent transferases |
C-terminal domain in some PLP-dependent transferases |
C-terminal domain in some PLP-dependent transferases |
3 |
6 |
no |
no |
PF19490 |
A0A2W1LPL3 |
20-478 |
nD1 |
6-99,121-375,431-475 |
394 |
e4wbdA1 |
4WBD |
2005.1.1 |
0.875 |
0.0 |
0.0 |
7.1|7.1|1 |
0.834 |
1.841 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HUP domain-like |
HUP domains |
HUP domains |
14 |
19 |
no |
no |
PF19492 |
A0A3M2GNS3 |
5-124 |
nD1 |
26-115 |
90 |
e1y9bA1 |
1Y9B |
101.1.11 |
0.939 |
0.203 |
0.787 |
3.4|4.3|0 |
0.843 |
1.463 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
4 |
0 |
no |
no |
PF19496 |
A0A0F5JU49 |
10-186 |
nD1 |
26-170 |
145 |
e1knyA1 |
1KNY |
601.7.1 |
0.941 |
0.0 |
0.0 |
8.1|8.1|1 |
0.898 |
1.028 |
pymol |
na |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
no |
PF19497 |
A0A3R5ZBZ5 |
1-476 |
nD1 |
1-130,146-235,306-440 |
355 |
e5cwoB1 |
5CWO |
109.3.1 |
0.943 |
0.0 |
0.0 |
5.4|7.2|0 |
0.658 |
1.784 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
15 |
0 |
no |
yes:11 |
PF19497 |
Q93QW1 |
1-433 |
nD1 |
6-125,136-225,301-425 |
335 |
e6pl5A1 |
6PL5 |
7011.1.1 |
0.903 |
0.72 |
0.502 |
7.2|8.2|0 |
0.333 |
0.952 |
pymol |
more |
good_domain |
alpha bundles |
RodA transmembrane domain |
RodA transmembrane domain |
RodA transmembrane domain |
12 |
0 |
no |
yes:11 |
PF19497 |
A0A413TIP1 |
1-433 |
nD1 |
1-130,276-315 |
170 |
e5cwoB1 |
5CWO |
109.3.1 |
0.923 |
0.0 |
0.0 |
7.7|7.7|1 |
0.53 |
0.854 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
0 |
no |
yes:4 |
PF19498 |
A0A1T5FGU3 |
69-259 |
nD1 |
73-190,221-240 |
138 |
e6e1032 |
6E10 |
148.1.3 |
0.908 |
0.0 |
0.0 |
4.0|6.3|0 |
0.809 |
1.484 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
5 |
4 |
no |
no |
PF19499 |
R7D4F1 |
1-450 |
nD1 |
56-260,287-335,366-443 |
332 |
e5cozA1 |
5COZ |
3425.2.1 |
0.926 |
1.0 |
0.999 |
17.5|17.5|1 |
0.825 |
1.344 |
pymol |
more |
good_domain |
a+b three layers |
Two-component system yycF/yycG regulatory protein yycH-like |
YycH C-terminal domain |
YycH C-terminal domain |
4 |
16 |
yes:out |
no |
PF19499 |
S0IPY0 |
1-496 |
nD2 |
51-115,186-495 |
375 |
e2o3oD1 |
2O3O |
3425.2.1 |
0.905 |
0.992 |
0.999 |
9.0|18.6|1 |
0.688 |
1.518 |
pymol |
more |
good_domain |
a+b three layers |
Two-component system yycF/yycG regulatory protein yycH-like |
YycH C-terminal domain |
YycH C-terminal domain |
6 |
19 |
yes:out |
no |
PF19500 |
A0A1F3JMX3 |
11-557 |
nD3 |
226-240,261-555 |
310 |
e2b0oF4 |
2B0O |
109.3.1 |
0.891 |
0.0 |
0.0 |
5.9|8.0|1 |
0.768 |
1.558 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
15 |
2 |
no |
no |
PF19500 |
A0A223V7I6 |
10-553 |
nD3 |
261-550 |
290 |
e1s70B1 |
1S70 |
109.3.1 |
0.937 |
0.0 |
0.0 |
5.5|8.0|1 |
0.624 |
1.457 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
14 |
1 |
no |
no |
PF19504 |
Q4A142 |
1-474 |
nD1 |
6-135,252-265 |
144 |
e3ez9B2 |
3EZ9 |
101.1.9 |
0.922 |
0.0 |
0.728 |
3.5|3.7|1 |
0.919 |
1.646 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
7 |
2 |
no |
no |
PF19504 |
A0A2D0UV39 |
9-499 |
nD4 |
371-440 |
70 |
e1lrzA1 |
1LRZ |
192.7.1 |
0.855 |
0.0 |
0.0 |
7.1|7.1|1 |
0.938 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
tRNA-binding arm |
tRNA-binding arm |
3 |
0 |
no |
no |
PF19506 |
A0A1G4R3W6 |
80-324 |
nD3 |
161-320 |
160 |
e7dluA2 |
7DLU |
5058.1.1 |
0.931 |
0.607 |
0.0 |
6.4|6.4|1 |
0.712 |
1.658 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
5 |
0 |
no |
yes:4 |
PF19509 |
A0A7J0B8X1 |
1-321 |
nD1 |
11-195 |
185 |
e2hm8A1 |
2HM8 |
109.4.1 |
0.939 |
0.0 |
0.0 |
4.2|4.2|1 |
0.741 |
0.647 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
0 |
no |
no |
PF19510 |
Q2FUN5 |
13-636 |
nD4 |
486-635 |
150 |
e3vu0B1 |
3VU0 |
3110.1.1 |
0.93 |
0.222 |
0.332 |
5.7|5.7|1 |
0.626 |
0.806 |
pymol |
na |
good_domain |
a/b three-layered sandwiches |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
STT3/PglB/AglB core domain |
5 |
5 |
no |
yes:out |
PF19513 |
Q5L8Q7 |
33-239 |
nD2 |
161-240 |
80 |
e5jbhQ1 |
5JBH |
616.1.1 |
0.931 |
0.0 |
0.0 |
4.0|4.2|1 |
0.841 |
0.982 |
pymol |
more |
good_domain |
alpha arrays |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
3 |
0 |
no |
no |
PF19513 |
A0A413JSV3 |
5-166 |
nD2 |
6-50,72-175 |
149 |
e5aj3O1 |
5AJ3 |
616.1.1 |
0.886 |
0.0 |
0.0 |
6.7|6.7|1 |
0.695 |
1.828 |
pymol |
more |
good_domain |
alpha arrays |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
S15/NS1 RNA-binding domain |
4 |
4 |
no |
no |
PF19514 |
A0A0A2E171 |
1-135 |
nD1 |
16-65 |
50 |
e6qeqA1 |
6QEQ |
101.1.11 |
0.891 |
0.997 |
0.988 |
0.0|4.7|0 |
0.975 |
0.813 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
2 |
0 |
no |
no |
PF19514 |
A0A0A2G7I9 |
1-138 |
nD1 |
11-60 |
50 |
e6qeqA1 |
6QEQ |
101.1.11 |
0.891 |
0.996 |
0.987 |
0.0|5.5|0 |
1.0 |
0.813 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
2 |
0 |
no |
no |
PF19522 |
A0A2S9PWZ2 |
1-61 |
nD1 |
11-65 |
55 |
e4hfqA1 |
4HFQ |
6132.1.1 |
0.896 |
0.0 |
0.0 |
6.3|6.3|1 |
0.826 |
0.866 |
pymol |
more |
good_domain |
alpha bundles |
Nudix hydrolase N-terminal dimerization domain |
Nudix hydrolase N-terminal dimerization domain |
Nudix hydrolase N-terminal dimerization domain |
3 |
0 |
no |
no |
PF19524 |
A0A1Y3XI21 |
1-110 |
nD1 |
1-110 |
110 |
e5wi2B1 |
5WI2 |
331.4.1 |
0.94 |
0.0 |
0.0 |
10.3|10.3|1 |
0.959 |
0.924 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Kinase associated domain 1, KA1 |
Kinase associated domain 1, KA1 |
2 |
5 |
no |
no |
PF19527 |
D3HWW2 |
72-511 |
nD1 |
41-350 |
310 |
e4ar9A1 |
4AR9 |
2498.1.1 |
0.934 |
0.987 |
0.992 |
9.8|10.8|1 |
0.86 |
1.235 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
10 |
6 |
no |
no |
PF19535 |
A0A074X232 |
26-190 |
nD1 |
31-194 |
164 |
e3ziwE2 |
3ZIW |
825.1.1 |
0.877 |
0.0 |
0.0 |
5.1|5.1|1 |
0.841 |
0.785 |
pymol |
more |
good_domain |
beta complex topology |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
2 |
8 |
yes:out |
no |
PF19535 |
A0A074XZK5 |
19-184 |
nD1 |
22-185 |
164 |
e3ziwE2 |
3ZIW |
825.1.1 |
0.905 |
0.0 |
0.0 |
6.1|6.1|1 |
0.849 |
0.785 |
pymol |
more |
good_domain |
beta complex topology |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
Aerolysin family of pore-forming toxins |
3 |
9 |
yes:out |
no |
PF19537 |
A0A2A6ZAU8 |
1-75 |
nD1 |
1-75 |
75 |
e2x8nA2 |
2X8N |
719.2.1 |
0.914 |
0.9 |
0.931 |
2.7|3.6|0 |
0.618 |
0.735 |
pymol |
more |
good_domain |
beta barrels |
XRCC4, N-terminal domain-like |
NE0471 N-terminal domain-like |
NE0471 N-terminal domain-like |
3 |
3 |
no |
no |
PF19542 |
A7HC04 |
2-194 |
nD1 |
21-199 |
179 |
e2zxoA3 |
2ZXO |
2.1.1 |
0.854 |
0.0 |
0.453 |
2.8|3.0|1 |
0.822 |
1.721 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
4 |
9 |
yes:out |
no |
PF19542 |
B4UC67 |
2-196 |
nD1 |
26-130,146-200 |
160 |
e6od8B2 |
6OD8 |
2.1.1 |
0.871 |
0.0 |
0.417 |
2.8|3.2|1 |
0.748 |
1.538 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
10 |
yes:out |
no |
PF19546 |
A0A1H9LM03 |
71-414 |
nD1 |
51-230 |
180 |
e2opdA1 |
2OPD |
274.1.1 |
0.91 |
0.0 |
0.0 |
3.0|3.6|0 |
0.848 |
1.463 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
5 |
8 |
no |
no |
PF19548 |
A0A4X1W4I2 |
103-222 |
nD2 |
111-215 |
105 |
e4nfaA2 |
4NFA |
216.1.1 |
0.874 |
0.0 |
0.0 |
3.8|4.2|1 |
0.616 |
0.689 |
pymol |
more |
good_domain |
a+b two layers |
UBC-like |
UBC-like |
UBC-like |
3 |
5 |
no |
no |
PF19553 |
A0A810Q321 |
202-366 |
nD3 |
296-369 |
74 |
e7ok0Q1 |
7OK0 |
103.1.1 |
0.882 |
0.0 |
0.0 |
6.3|6.5|0 |
0.985 |
1.298 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
3 |
1 |
no |
no |
PF19555 |
A0A6A7W8I6 |
10-147 |
nD2 |
71-145 |
75 |
e4ybaB1 |
4YBA |
101.1.4 |
0.902 |
0.0 |
0.802 |
4.4|5.1|0 |
0.843 |
0.962 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
3 |
3 |
no |
no |
PF19555 |
R6Q086 |
13-147 |
nD2 |
71-145 |
75 |
e4ybaB1 |
4YBA |
101.1.4 |
0.902 |
0.0 |
0.796 |
4.4|5.1|0 |
0.843 |
0.962 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
3 |
3 |
no |
no |
PF19555 |
L0JEY6 |
4-140 |
nD2 |
61-140 |
80 |
e4ybaB1 |
4YBA |
101.1.4 |
0.894 |
0.0 |
0.767 |
3.8|4.4|0 |
0.833 |
1.026 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tetra-helical, lambda repressor-like |
3 |
3 |
no |
no |
PF19557 |
A0A0C1JTH3 |
1-1241 |
nD4 |
476-695 |
220 |
e7oseE2 |
7OSE |
5069.1.1 |
0.923 |
0.0 |
0.0 |
5.9|5.9|1 |
0.535 |
1.038 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
6 |
no |
no |
PF19557 |
A0A0C1JTH3 |
1-1241 |
nD6 |
841-970 |
130 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.85 |
0.233 |
0.0 |
3.3|6.4|0 |
0.417 |
0.769 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
5 |
0 |
no |
no |
PF19557 |
Q2RKS3 |
1-1199 |
nD6 |
796-920 |
125 |
e5h6iA1 |
5H6I |
632.25.1 |
0.939 |
0.0 |
0.0 |
6.7|6.7|1 |
0.524 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
GBS CAMP factor N-terminal domain |
GBS CAMP factor N-terminal domain |
4 |
0 |
no |
no |
PF19563 |
A0A1F2Q7G8 |
2-104 |
nD1 |
1-40 |
40 |
e7eu1L1 |
7EU1 |
375.1.1 |
0.915 |
0.798 |
0.893 |
0.0|0.0|1 |
0.563 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
2 |
no |
no |
PF19565 |
A0A6B2V0R8 |
1-105 |
nD1 |
6-80 |
75 |
e2k7iA1 |
2K7I |
4325.1.1 |
0.882 |
0.0 |
0.0 |
3.0|4.0|0 |
0.838 |
1.293 |
pymol |
more |
good_domain |
mixed a+b and a/b |
YegP-like |
YegP-like |
YegP-like |
3 |
3 |
no |
no |
PF19578 |
A0A2K8XAM9 |
28-209 |
nD2 |
56-175,196-235 |
160 |
e7jh6B1 |
7JH6 |
3684.1.1 |
0.94 |
0.0 |
0.0 |
11.8|11.8|1 |
0.86 |
1.27 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
5 |
0 |
no |
yes:out |
PF19578 |
A0A1H1RTH5 |
16-208 |
nD2 |
46-110,126-230 |
170 |
e6egcA1 |
6EGC |
192.29.1 |
0.91 |
0.0 |
0.0 |
10.2|10.2|1 |
0.746 |
2.237 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:out |
PF19578 |
A0A2P8CGY9 |
25-206 |
nD2 |
56-230 |
175 |
e7jh6B1 |
7JH6 |
3684.1.1 |
0.938 |
0.0 |
0.0 |
11.9|11.9|1 |
0.917 |
1.389 |
pymol |
more |
good_domain |
alpha complex topology |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
PSPTO4464 C-terminal domain-like |
5 |
1 |
no |
yes:out |
PF19585 |
A0A7C5WZQ5 |
10-93 |
nD1 |
6-95 |
90 |
e1yo7B1 |
1YO7 |
605.4.1 |
0.901 |
0.0 |
0.0 |
5.9|5.9|1 |
0.763 |
1.314 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
ROP protein |
ROP protein |
4 |
0 |
no |
no |
PF19587 |
A0A417NBH3 |
9-347 |
nD1 |
11-120 |
110 |
e6egcA1 |
6EGC |
192.29.1 |
0.944 |
0.0 |
0.251 |
12.8|12.8|1 |
0.759 |
1.447 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
yes:out |
PF19587 |
A0A0S2W4S0 |
10-348 |
nD1 |
11-130 |
120 |
e6egcA1 |
6EGC |
192.29.1 |
0.894 |
0.0 |
0.0 |
11.0|11.0|1 |
0.779 |
1.579 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
yes:out |
PF19587 |
R9LVQ1 |
14-352 |
nD1 |
16-110 |
95 |
e6egcA1 |
6EGC |
192.29.1 |
0.912 |
0.0 |
0.0 |
11.5|11.5|1 |
0.65 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
1 |
no |
yes:out |
PF19591 |
Q65PT3 |
5-134 |
nD1 |
6-105 |
100 |
e5ir0B1 |
5IR0 |
3103.1.1 |
0.9 |
0.568 |
0.0 |
2.4|2.4|1 |
0.702 |
0.862 |
pymol |
more |
good_domain |
alpha arrays |
Uncharacterized protein yqbN |
Uncharacterized protein yqbN |
Uncharacterized protein yqbN |
4 |
3 |
no |
no |
PF19592 |
A0A1G4TQY4 |
1-128 |
nD1 |
6-130 |
125 |
e6wvgA2 |
6WVG |
174.1.1 |
0.887 |
0.296 |
0.0 |
7.6|7.6|1 |
0.48 |
0.856 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
0 |
no |
yes:2 |
PF19593 |
A0A0H2KL68 |
1-125 |
nD1 |
1-125 |
125 |
e1rboC1 |
1RBO |
302.2.1 |
0.857 |
0.15 |
0.208 |
2.7|3.7|1 |
0.65 |
1.016 |
pymol |
more |
good_domain |
a+b two layers |
Reverse ferredoxin |
RuBisCO, small subunit |
RuBisCO, small subunit |
3 |
5 |
no |
no |
PF19595 |
A0A1Y4HBK6 |
5-219 |
nD1 |
1-80 |
80 |
e3csxB1 |
3CSX |
192.23.1 |
0.944 |
0.516 |
0.202 |
8.3|8.3|1 |
0.915 |
1.127 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
DUF683 |
DUF683 |
3 |
0 |
no |
no |
PF19595 |
A0A1Y4EVD9 |
2-220 |
nD1 |
6-80 |
75 |
e4uigA1 |
4UIG |
3826.1.1 |
0.934 |
0.0 |
0.0 |
7.3|7.3|1 |
0.855 |
0.852 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
3 |
0 |
no |
no |
PF19596 |
A0A2P7SG40 |
2-186 |
nD1 |
16-130 |
115 |
e7nkyO1 |
7NKY |
220.1.1 |
0.857 |
0.0 |
0.168 |
4.5|4.5|1 |
0.859 |
0.943 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
no |
no |
PF19596 |
A0A1X7NSJ4 |
3-186 |
nD1 |
16-130 |
115 |
e7nkyO1 |
7NKY |
220.1.1 |
0.877 |
0.0 |
0.0 |
4.6|5.9|1 |
0.871 |
0.943 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
no |
no |
PF19597 |
A0A090ZPF9 |
1-276 |
nD2 |
1-30,101-250 |
180 |
e6e7eA1 |
6E7E |
3755.4.1 |
0.88 |
0.0 |
0.0 |
7.3|7.3|1 |
0.741 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
5 |
0 |
yes:in |
yes:4 |
PF19600 |
A0A2W4EUD7 |
1-110 |
nD1 |
1-90 |
90 |
e4me7F1 |
4ME7 |
101.1.11 |
0.85 |
0.0 |
0.0 |
4.1|5.2|0 |
0.898 |
1.463 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
yes:2 |
PF19600 |
A0A1S7PKK4 |
1-105 |
nD1 |
1-100 |
100 |
e6a6xC1 |
6A6X |
101.1.11 |
0.942 |
0.0 |
0.0 |
4.4|4.8|0 |
0.952 |
1.626 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Ribbon-helix-helix |
3 |
0 |
no |
yes:2 |
PF19601 |
N2A2F1 |
1-167 |
nD2 |
1-15,61-165 |
120 |
e7nkyO3 |
7NKY |
220.1.1 |
0.889 |
0.0 |
0.245 |
7.3|7.7|1 |
0.887 |
0.984 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
8 |
no |
yes:out |
PF19601 |
R5P9A4 |
1-173 |
nD2 |
6-15,66-173 |
118 |
e5ejsA4 |
5EJS |
220.1.1 |
0.907 |
0.0 |
0.0 |
7.1|7.3|1 |
0.915 |
0.967 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
4 |
8 |
no |
yes:out |
PF19602 |
A0A1H9V2F3 |
1-102 |
nD1 |
6-100 |
95 |
e1rp3E3 |
1RP3 |
142.1.1 |
0.91 |
0.0 |
0.0 |
5.0|5.0|1 |
0.848 |
0.995 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
3 |
0 |
no |
yes:3 |
PF19603 |
A0A316STR4 |
5-131 |
nD1 |
11-130 |
120 |
e6e8aA1 |
6E8A |
881.1.1 |
0.857 |
0.0 |
0.0 |
7.2|7.2|1 |
0.79 |
0.729 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
5 |
no |
no |
PF19604 |
A0A1Q3HH89 |
1-660 |
nD1 |
6-165 |
160 |
e4yvoA1 |
4YVO |
109.4.1 |
0.935 |
0.0 |
0.714 |
6.5|10.4|1 |
0.87 |
0.559 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
no |
PF19613 |
A0A2V3TT03 |
3-247 |
nD1 |
36-60,66-90,111-140 |
80 |
e6bs9A1 |
6BS9 |
5060.2.1 |
0.86 |
0.329 |
0.217 |
0.0|6.1|0 |
0.645 |
0.727 |
pymol |
more |
good_domain |
alpha bundles |
V-type ATP synthase subunit C |
Toxin coregulated pilus biosynthesis protein E cytoplasmic domain |
Toxin coregulated pilus biosynthesis protein E cytoplasmic domain |
3 |
0 |
no |
yes:out |
PF19614 |
A0A2N0WQ05 |
10-567 |
nD1 |
6-240 |
235 |
e2owlA1 |
2OWL |
3435.1.1 |
0.898 |
0.0 |
0.0 |
6.6|7.9|1 |
0.605 |
1.78 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
7 |
13 |
no |
no |
PF19615 |
R5RR59 |
13-106 |
nD1 |
6-80 |
75 |
e2o4tA1 |
2O4T |
4125.1.1 |
0.901 |
0.597 |
0.926 |
5.8|5.8|1 |
0.807 |
0.833 |
pymol |
more |
good_domain |
alpha superhelices |
BH3980-like |
BH3980-like |
BH3980-like |
4 |
0 |
no |
yes:out |
PF19624 |
A0A2P5MRR5 |
25-72 |
nD1 |
1-85 |
85 |
e2ci2I1 |
2CI2 |
294.1.1 |
0.851 |
0.0 |
0.0 |
3.4|3.6|1 |
0.818 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
CI-2 family of serine protease inhibitors-like |
CI-2 family of serine protease inhibitors |
CI-2 family of serine protease inhibitors |
3 |
5 |
no |
no |
PF19630 |
A0A2S5LCA7 |
7-190 |
nD1 |
1-190 |
190 |
e6ntrC1 |
6NTR |
71.2.1 |
0.935 |
0.959 |
0.945 |
13.6|13.6|1 |
0.806 |
0.888 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
0 |
15 |
no |
no |
PF19633 |
A0A1D6PUZ7 |
2-385 |
nD1 |
6-135,231-295 |
195 |
e3kdwA1 |
3KDW |
3711.1.1 |
0.927 |
0.0 |
0.0 |
5.1|5.1|1 |
0.414 |
1.757 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
7 |
4 |
no |
yes:1 |
PF19633 |
A0A398ANH7 |
61-479 |
nD2 |
81-320,356-385,412-425,448-470 |
307 |
e6xssD1 |
6XSS |
109.3.1 |
0.928 |
0.0 |
0.0 |
4.1|4.1|1 |
0.778 |
1.543 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
15 |
4 |
no |
no |
PF19633 |
A0A1D6IYB6 |
2-385 |
nD1 |
6-70,91-135,231-295 |
175 |
e5cwfA1 |
5CWF |
109.3.1 |
0.879 |
0.0 |
0.0 |
3.7|3.7|0 |
0.48 |
0.879 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
4 |
no |
no |
PF19635 |
A0A081NT24 |
1-554 |
nD3 |
306-555 |
250 |
e6h7wR1 |
6H7W |
109.4.1 |
0.939 |
0.0 |
0.0 |
5.6|6.4|1 |
0.505 |
0.874 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
11 |
4 |
no |
no |
PF19637 |
Q7MXG8 |
1-69 |
nD1 |
1-73 |
73 |
e5t5hS2 |
5T5H |
3115.1.1 |
0.866 |
0.0 |
0.0 |
3.7|4.1|1 |
0.84 |
0.936 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
5 |
no |
no |
PF19637 |
A0A1R4AH81 |
1-69 |
nD1 |
1-70 |
70 |
e5t5hS2 |
5T5H |
3115.1.1 |
0.89 |
0.0 |
0.0 |
4.1|4.7|1 |
0.805 |
0.897 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
1 |
5 |
no |
no |
PF19637 |
A0A7X9Y6C7 |
1-69 |
nD1 |
1-70 |
70 |
e2dl4A1 |
2DL4 |
4.1.1 |
0.866 |
0.0 |
0.264 |
2.7|4.0|0 |
0.82 |
0.875 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
5 |
no |
no |
PF19638 |
A0A2E5XT59 |
4-162 |
nD1 |
11-65 |
55 |
e2mmuA1 |
2MMU |
3928.1.1 |
0.91 |
0.455 |
0.0 |
4.3|4.3|1 |
0.82 |
0.833 |
pymol |
more |
good_domain |
alpha bundles |
Cell division protein CrgA |
Cell division protein CrgA |
Cell division protein CrgA |
2 |
1 |
no |
yes:2 |
PF19640 |
A0A1V4IL13 |
6-188 |
nD1 |
26-185 |
160 |
e3x0tA1 |
3X0T |
10.1.2 |
0.939 |
0.0 |
0.0 |
8.0|8.0|1 |
0.927 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
11 |
no |
no |
PF19640 |
J7IX33 |
7-186 |
nD1 |
21-185 |
165 |
e7rrmA1 |
7RRM |
10.1.2 |
0.943 |
0.0 |
0.0 |
7.7|7.7|1 |
0.977 |
1.051 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
11 |
no |
no |
PF19640 |
A0A366IBF1 |
6-187 |
nD1 |
26-185 |
160 |
e3x0tA1 |
3X0T |
10.1.2 |
0.941 |
0.0 |
0.0 |
8.1|8.1|1 |
0.933 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
11 |
no |
no |
PF19644 |
A0A373B9A4 |
16-152 |
nD1 |
21-155 |
135 |
e4nkqA1 |
4NKQ |
11.1.1 |
0.94 |
0.0 |
0.739 |
5.9|8.1|0 |
0.956 |
1.25 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
7 |
yes:out |
no |
PF19644 |
A0A3R6ZYN0 |
23-160 |
nD1 |
31-163 |
133 |
e4nkqA1 |
4NKQ |
11.1.1 |
0.948 |
0.0 |
0.789 |
5.9|8.1|0 |
0.933 |
1.231 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
8 |
yes:out |
no |
PF19645 |
A0A608QIE8 |
6-79 |
nD1 |
6-60 |
55 |
e5zwlE1 |
5ZWL |
192.6.1 |
0.881 |
0.0 |
0.0 |
5.5|6.1|0 |
0.925 |
1.146 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
2 |
2 |
no |
no |
PF19646 |
A0A3A5JII6 |
1-196 |
nD1 |
6-173 |
168 |
e6omfF1 |
6OMF |
142.1.1 |
0.856 |
0.0 |
0.377 |
3.5|3.5|1 |
0.855 |
1.759 |
pymol |
more |
good_domain |
alpha complex topology |
Sigma2 domain-like |
Sigma2 domain of RNA polymerase sigma factors |
Sigma2 domain of RNA polymerase sigma factors |
5 |
2 |
no |
no |
PF19651 |
M8E418 |
1-79 |
nD1 |
1-70 |
70 |
e4myyB1 |
4MYY |
6051.4.1 |
0.853 |
0.0 |
0.0 |
2.9|2.9|1 |
0.86 |
1.628 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Docking domains in modular polyketide synthases |
Class 2 N-terminal docking domain |
Class 2 N-terminal docking domain |
4 |
0 |
no |
no |
PF19652 |
A0A3P3WE85 |
1-170 |
nD2 |
41-165 |
125 |
e3lpzA1 |
3LPZ |
109.4.1 |
0.918 |
0.0 |
0.517 |
11.6|12.1|1 |
0.665 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF19652 |
A0A444HAT3 |
1-170 |
nD2 |
41-165 |
125 |
e3lpzA1 |
3LPZ |
109.4.1 |
0.92 |
0.0 |
0.49 |
11.9|11.9|1 |
0.665 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF19652 |
G0L2Z7 |
1-169 |
nD2 |
41-165 |
125 |
e3lpzA1 |
3LPZ |
109.4.1 |
0.919 |
0.0 |
0.5 |
12.0|12.0|1 |
0.671 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
6 |
0 |
no |
no |
PF19654 |
A0A1S6FNG9 |
1-125 |
nD1 |
1-120 |
120 |
e3eyyB1 |
3EYY |
101.1.2 |
0.945 |
0.0 |
0.0 |
2.9|3.0|1 |
0.813 |
1.263 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
5 |
no |
no |
PF19658 |
A0A139NAG6 |
217-422 |
nD3 |
231-410 |
180 |
e5y06A1 |
5Y06 |
3755.3.1 |
0.881 |
0.0 |
0.0 |
7.3|7.9|0 |
0.801 |
1.047 |
pymol |
na |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:2 |
PF19658 |
A0A1B1Y5M9 |
179-406 |
nD4 |
266-370 |
105 |
e6pyrB1 |
6PYR |
3755.4.1 |
0.874 |
0.0 |
0.0 |
8.3|8.4|0 |
0.758 |
0.621 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
3 |
0 |
no |
yes:2 |
PF19658 |
A0A3A9UHJ4 |
182-405 |
nD4 |
216-395 |
180 |
e6pyrB1 |
6PYR |
3755.4.1 |
0.93 |
0.0 |
0.0 |
8.4|8.4|1 |
0.777 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain |
3 |
0 |
no |
yes:2 |
PF19660 |
A0A2W4BEP2 |
1-145 |
nD1 |
16-130 |
115 |
e6wvdA2 |
6WVD |
174.1.1 |
0.917 |
0.0 |
0.0 |
7.5|7.5|1 |
0.737 |
0.788 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
4 |
0 |
no |
yes:4 |
PF19666 |
A0A1K1NP12 |
65-155 |
nD1 |
1-160 |
160 |
e5o7oA1 |
5O7O |
213.1.1 |
0.946 |
0.0 |
0.0 |
7.5|7.5|1 |
0.931 |
0.973 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
3 |
7 |
no |
no |
PF19666 |
A0A6L3IQH5 |
66-154 |
nD1 |
1-160 |
160 |
e5o7oA1 |
5O7O |
213.1.1 |
0.908 |
0.0 |
0.0 |
7.9|7.9|1 |
0.901 |
0.973 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
3 |
7 |
no |
no |
PF19666 |
A0A6F9ZFH0 |
65-155 |
nD1 |
1-160 |
160 |
e5o7oA1 |
5O7O |
213.1.1 |
0.931 |
0.0 |
0.0 |
7.9|7.9|1 |
0.907 |
0.973 |
pymol |
more |
good_domain |
a+b three layers |
Nat/Ivy |
Acyl-CoA N-acyltransferases (Nat) |
Acyl-CoA N-acyltransferases (Nat) |
4 |
7 |
no |
no |
PF19672 |
A0A3B9GRG3 |
1-286 |
nD2 |
176-288 |
113 |
e7qepN21 |
7QEP |
3715.1.1 |
0.853 |
0.0 |
0.0 |
6.2|6.6|1 |
0.897 |
1.13 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein L22e |
Ribosomal protein L22e |
Ribosomal protein L22e |
3 |
6 |
no |
no |
PF19676 |
A0A0D2GE73 |
41-595 |
nD1 |
26-80 |
55 |
e3ajcA3 |
3AJC |
531.2.1 |
0.924 |
0.882 |
0.0 |
5.1|6.1|0 |
0.742 |
0.625 |
pymol |
more |
good_domain |
alpha arrays |
Domains of FliG |
Middle domain of FliG |
Middle domain of FliG |
4 |
0 |
no |
no |
PF19676 |
A0A0D2GE73 |
41-595 |
nD2 |
81-250 |
170 |
e2yvyA1 |
2YVY |
109.13.1 |
0.912 |
0.0 |
0.902 |
7.0|7.0|1 |
0.766 |
1.339 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
MgtE N-terminal domain-like |
MgtE N-terminal domain-like |
7 |
3 |
no |
no |
PF19676 |
A0A0D2GE73 |
41-595 |
nD4 |
381-595 |
215 |
e3uo3A3 |
3UO3 |
622.1.1 |
0.948 |
0.0 |
0.0 |
4.8|4.8|1 |
0.889 |
2.443 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
7 |
1 |
no |
no |
PF19678 |
A0A0S2DH80 |
23-129 |
nD1 |
26-125 |
100 |
e1wqaC10 |
1WQA |
331.2.1 |
0.937 |
0.0 |
0.0 |
7.6|8.9|0 |
0.918 |
1.015 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Phosphoglucomutase, C-terminal domain |
Phosphoglucomutase, C-terminal domain |
2 |
5 |
yes:out |
no |
PF19681 |
A0A327VK66 |
36-396 |
nD2 |
226-395 |
170 |
e3nr5A1 |
3NR5 |
243.9.1 |
0.936 |
0.0 |
0.0 |
8.0|8.0|1 |
0.893 |
1.133 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Nuclease A inhibitor (NuiA)-related |
Nuclease A inhibitor (NuiA)-related |
5 |
6 |
no |
no |
PF19681 |
A0A285KEZ6 |
19-354 |
nD1 |
6-165 |
160 |
e4flbA1 |
4FLB |
109.4.1 |
0.91 |
0.0 |
0.065 |
5.6|7.1|1 |
0.785 |
0.559 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF19681 |
A0A285KEZ6 |
19-354 |
nD2 |
191-354 |
164 |
e3nr5A1 |
3NR5 |
243.9.1 |
0.929 |
0.0 |
0.0 |
7.7|7.7|1 |
0.872 |
1.093 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Nuclease A inhibitor (NuiA)-related |
Nuclease A inhibitor (NuiA)-related |
5 |
6 |
no |
no |
PF19682 |
S9R7R2 |
35-117 |
nD1 |
21-115 |
95 |
e4xguB2 |
4XGU |
148.1.3 |
0.939 |
0.0 |
0.0 |
3.9|4.4|0 |
0.847 |
1.022 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
1 |
yes:in |
no |
PF19683 |
D9VJV7 |
48-841 |
nD1 |
51-240 |
190 |
e2nc8A1 |
2NC8 |
4081.1.1 |
0.916 |
0.0 |
0.0 |
8.9|8.9|1 |
0.795 |
0.918 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
3 |
12 |
yes:out |
yes:out |
PF19683 |
D9VJV7 |
48-841 |
nD2 |
241-545,686-725 |
345 |
e3ma9A1 |
3MA9 |
3567.1.1 |
0.911 |
0.0 |
0.0 |
6.4|7.5|0 |
0.62 |
5.847 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
MPER trimer |
MPER trimer |
MPER trimer |
10 |
0 |
yes:out |
yes:9 |
PF19683 |
A0A0N0T3R6 |
10-829 |
nD1 |
11-210 |
200 |
e2nc8A1 |
2NC8 |
4081.1.1 |
0.912 |
0.0 |
0.0 |
8.5|8.5|1 |
0.807 |
0.966 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
4 |
11 |
no |
yes:out |
PF19683 |
A0A1U9QT03 |
28-850 |
nD1 |
31-220 |
190 |
e2nc8A1 |
2NC8 |
4081.1.1 |
0.916 |
0.0 |
0.0 |
8.4|8.4|1 |
0.789 |
0.918 |
pymol |
more |
good_domain |
beta sandwiches |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
Baculovirus p35 protein-related |
3 |
11 |
yes:out |
yes:out |
PF19683 |
A0A1U9QT03 |
28-850 |
nD3 |
221-300,491-585,656-800 |
320 |
e1r0dI1 |
1R0D |
601.1.2 |
0.863 |
0.0 |
0.0 |
6.6|7.7|0 |
0.805 |
1.939 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
11 |
1 |
yes:out |
yes:9 |
PF19691 |
E4MYY8 |
94-373 |
nD4 |
296-370 |
75 |
e4aj5J1 |
4AJ5 |
603.1.1 |
0.855 |
0.0 |
0.0 |
4.9|4.9|1 |
0.468 |
0.714 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
3 |
0 |
no |
no |
PF19702 |
A0A1A6FIJ0 |
7-81 |
nD1 |
23-80 |
58 |
e3mb2B1 |
3MB2 |
315.1.1 |
0.896 |
0.0 |
0.0 |
3.1|3.6|1 |
0.846 |
0.516 |
pymol |
more |
good_domain |
a+b two layers |
Tautomerase/MIF-like |
Tautomerase/MIF |
Tautomerase/MIF |
2 |
2 |
no |
no |
PF19707 |
A0A5C4Y318 |
1-111 |
nD1 |
1-105 |
105 |
e4gurA2 |
4GUR |
244.1.1 |
0.917 |
0.0 |
0.0 |
4.9|6.0|0 |
0.848 |
0.972 |
pymol |
more |
good_domain |
a+b two layers |
FAD-linked reductases, C-terminal domain-like |
FAD-linked reductases-C |
FAD-linked reductases-C |
3 |
4 |
no |
no |
PF19711 |
Q82RE2 |
9-74 |
nD1 |
11-75 |
65 |
e5n7lA1 |
5N7L |
310.3.1 |
0.919 |
0.37 |
0.643 |
4.4|4.4|1 |
0.726 |
0.677 |
pymol |
more |
good_domain |
a+b two layers |
RRF/tRNA synthetase additional domain-like |
General secretion pathway protein M (EpsM) periplasmic domain-related |
General secretion pathway protein M (EpsM) periplasmic domain-related |
1 |
3 |
no |
no |
PF19711 |
L8F135 |
1-67 |
nD1 |
11-65 |
55 |
e3kp1C5 |
3KP1 |
872.5.1 |
0.922 |
0.0 |
0.0 |
4.0|4.0|1 |
0.738 |
0.84 |
pymol |
more |
good_domain |
a+b two layers |
Dodecin subunit-like |
D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain |
D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain |
1 |
3 |
no |
no |
PF19713 |
A0A1Q4R3W6 |
3-298 |
nD1 |
11-165 |
155 |
e6ansB1 |
6ANS |
10.18.1 |
0.944 |
0.641 |
0.297 |
6.6|7.5|1 |
0.76 |
0.756 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
VPA0735-like |
VPA0735-like |
4 |
7 |
no |
no |
PF19713 |
A0A6P0YXU5 |
3-290 |
nD1 |
6-165 |
160 |
e6ansB2 |
6ANS |
10.18.1 |
0.889 |
0.0 |
0.277 |
6.7|6.7|1 |
0.805 |
0.78 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
VPA0735-like |
VPA0735-like |
3 |
8 |
no |
yes:1 |
PF19713 |
K9Q521 |
3-310 |
nD1 |
11-315 |
305 |
e3irpX8 |
3IRP |
11.1.5 |
0.948 |
0.0 |
0.0 |
6.1|7.5|0 |
0.767 |
1.981 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
9 |
17 |
no |
no |
PF19714 |
A0A0A6UHY0 |
50-283 |
nD1 |
56-170 |
115 |
e5d0fB2 |
5D0F |
3156.1.1 |
0.872 |
0.0 |
0.0 |
7.1|7.1|1 |
0.649 |
0.782 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
1 |
9 |
yes:out |
no |
PF19714 |
A0A1I1ZR61 |
40-269 |
nD1 |
41-155 |
115 |
e6pxvA2 |
6PXV |
11.1.1 |
0.906 |
0.0 |
0.628 |
5.5|6.3|0 |
0.889 |
1.065 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
9 |
yes:out |
no |
PF19714 |
A0A0K1Q4S3 |
49-290 |
nD1 |
51-170 |
120 |
e2crzA1 |
2CRZ |
11.1.1 |
0.868 |
0.0 |
0.852 |
6.1|7.2|0 |
0.896 |
1.111 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
10 |
yes:out |
no |
PF19714 |
A0A0K1Q4S3 |
49-290 |
nD2 |
176-290 |
115 |
e5d0fB2 |
5D0F |
3156.1.1 |
0.872 |
0.0 |
0.0 |
7.2|7.2|1 |
0.664 |
0.782 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
2 |
9 |
yes:out |
no |
PF19717 |
A0A3N7I1L9 |
3-357 |
nD2 |
56-215 |
160 |
e4ci7B2 |
4CI7 |
10.1.2 |
0.948 |
0.0 |
0.591 |
8.8|8.8|1 |
0.915 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
10 |
no |
no |
PF19719 |
A0A0H4C750 |
6-71 |
nD1 |
1-70 |
70 |
e4kisA2 |
4KIS |
375.1.9 |
0.949 |
0.0 |
0.0 |
6.1|6.4|0 |
0.747 |
0.354 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Zinc-nucleated domain of serine integrase |
2 |
2 |
no |
no |
PF19719 |
A0A0L8NKJ8 |
6-71 |
nD1 |
1-70 |
70 |
e6vmeF1 |
6VME |
192.15.1 |
0.9 |
0.0 |
0.0 |
6.6|6.6|1 |
0.821 |
0.651 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Endosomal sorting complex assembly domains |
Endosomal sorting complex assembly domains |
2 |
2 |
no |
no |
PF19721 |
A0A6M4WUB7 |
12-148 |
nD1 |
51-235 |
185 |
e4tmdA1 |
4TMD |
881.1.1 |
0.93 |
0.0 |
0.0 |
8.5|8.5|1 |
0.851 |
1.125 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
7 |
no |
yes:out |
PF19721 |
A0A2R4JM96 |
12-151 |
nD2 |
61-235 |
175 |
e4tmdA1 |
4TMD |
881.1.1 |
0.938 |
0.0 |
0.0 |
8.3|8.3|1 |
0.851 |
1.064 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
3 |
7 |
no |
yes:out |
PF19721 |
A0A0F2TCK1 |
17-141 |
nD1 |
71-230 |
160 |
e7cu9B1 |
7CU9 |
881.1.1 |
0.881 |
0.0 |
0.0 |
6.8|6.8|1 |
0.79 |
0.973 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
7 |
no |
yes:out |
PF19728 |
A0A0T5ZJ09 |
24-88 |
nD1 |
1-129 |
129 |
e6egcA1 |
6EGC |
192.29.1 |
0.928 |
0.0 |
0.0 |
14.6|14.6|1 |
0.815 |
1.697 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF19728 |
A0A418SSS8 |
17-79 |
nD1 |
1-110 |
110 |
e6egcA1 |
6EGC |
192.29.1 |
0.927 |
0.0 |
0.0 |
13.4|13.4|1 |
0.717 |
1.447 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
yes:in |
yes:3 |
PF19728 |
A0A536G1I8 |
25-88 |
nD1 |
1-133 |
133 |
e6egcA1 |
6EGC |
192.29.1 |
0.916 |
0.0 |
0.0 |
12.5|12.5|1 |
0.805 |
1.75 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF19733 |
A0A2A5LLG9 |
37-132 |
nD2 |
26-133 |
108 |
e4p1nB1 |
4P1N |
604.12.1 |
0.87 |
0.0 |
0.0 |
8.6|10.7|0 |
0.957 |
1.249 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
yes:out |
yes:3 |
PF19744 |
A0A0X3V766 |
10-147 |
nD2 |
1-40,111-153 |
83 |
e3dcxA1 |
3DCX |
220.1.1 |
0.883 |
0.0 |
0.295 |
7.2|9.1|1 |
0.834 |
0.68 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
7 |
no |
yes:out |
PF19744 |
A0A2W4QQY9 |
13-145 |
nD2 |
1-40,111-160 |
90 |
e2hthB1 |
2HTH |
220.1.1 |
0.896 |
0.264 |
0.537 |
5.6|7.0|1 |
0.761 |
0.738 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
yes:out |
PF19744 |
A0A2W4NSM1 |
13-145 |
nD2 |
1-40,111-165 |
95 |
e3b77A2 |
3B77 |
220.1.1 |
0.877 |
0.0 |
0.602 |
5.2|10.1|1 |
0.577 |
0.779 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
1 |
7 |
no |
yes:out |
PF19749 |
A0A346NLV0 |
2-294 |
nD1 |
1-70,96-155 |
130 |
e5jeaJ1 |
5JEA |
2006.1.4 |
0.902 |
0.0 |
0.0 |
4.2|4.2|1 |
0.728 |
0.762 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
PIN domain-like |
3 |
7 |
no |
no |
PF19751 |
C9ZEZ7 |
3-154 |
nD1 |
11-145 |
135 |
e6tb3BW1 |
6TB3 |
603.1.1 |
0.861 |
0.0 |
0.0 |
8.8|8.8|1 |
0.886 |
1.286 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
no |
PF19751 |
E2Q8U1 |
5-133 |
nD1 |
6-125 |
120 |
e6tb3BW1 |
6TB3 |
603.1.1 |
0.899 |
0.0 |
0.0 |
7.5|7.5|1 |
0.873 |
1.143 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
5 |
0 |
no |
no |
PF19751 |
A0A852ZXS9 |
1-137 |
nD1 |
6-135 |
130 |
e4j2cC1 |
4J2C |
603.1.1 |
0.935 |
0.0 |
0.0 |
8.7|8.7|1 |
0.928 |
1.238 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
0 |
no |
no |
PF19752 |
A0A1Q4WUS6 |
1-174 |
nD1 |
11-165 |
155 |
e7oseE2 |
7OSE |
5069.1.1 |
0.939 |
0.0 |
0.0 |
6.4|6.4|1 |
0.722 |
0.731 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
0 |
no |
yes:5 |
PF19753 |
A0A1I1ME40 |
140-346 |
nD1 |
136-185,296-330 |
85 |
e5mp9L2 |
5MP9 |
148.1.3 |
0.921 |
0.0 |
0.0 |
4.2|4.6|0 |
0.827 |
0.914 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
0 |
no |
no |
PF19753 |
G9X2E2 |
222-396 |
nD4 |
186-280,346-405 |
155 |
e5cwcA1 |
5CWC |
159.1.2 |
0.906 |
0.0 |
0.0 |
3.2|3.2|1 |
0.439 |
1.685 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
9 |
2 |
no |
no |
PF19753 |
G9XFU5 |
222-396 |
nD2 |
186-280,346-405 |
155 |
e6z1f31 |
6Z1F |
148.1.3 |
0.909 |
0.0 |
0.0 |
3.5|3.5|1 |
0.772 |
1.667 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
9 |
2 |
no |
no |
PF19765 |
A0A2N0ERA8 |
23-142 |
nD1 |
26-145 |
120 |
e4xinB1 |
4XIN |
9.27.1 |
0.865 |
0.0 |
0.0 |
10.8|10.8|1 |
0.86 |
1.034 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
LpqH |
LpqH |
0 |
11 |
yes:out |
no |
PF19765 |
A0A2H5XY07 |
1-118 |
nD1 |
1-120 |
120 |
e7fdsB1 |
7FDS |
9.27.1 |
0.865 |
0.569 |
0.393 |
11.6|11.6|1 |
0.862 |
1.034 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
LpqH |
LpqH |
0 |
11 |
no |
no |
PF19766 |
A0A1E5P7B6 |
1-71 |
nD1 |
1-65 |
65 |
e5in1A1 |
5IN1 |
4.8.1 |
0.864 |
0.0 |
0.0 |
2.7|2.8|0 |
0.784 |
0.985 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
Chromo domain-like |
Chromo domain-like |
2 |
6 |
no |
no |
PF19769 |
W0I7B8 |
5-179 |
nD1 |
1-40 |
40 |
e2nb9A1 |
2NB9 |
375.1.1 |
0.943 |
0.962 |
0.967 |
0.0|2.6|0 |
0.884 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF19769 |
W0I7B8 |
5-179 |
nD3 |
106-190 |
85 |
e5jbhG1 |
5JBH |
239.1.1 |
0.94 |
0.0 |
0.0 |
5.5|5.5|1 |
0.702 |
0.766 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
2 |
7 |
no |
no |
PF19769 |
A0A7J2TJI3 |
5-181 |
nD1 |
1-35 |
35 |
e6kf3P1 |
6KF3 |
375.1.1 |
0.932 |
0.961 |
0.964 |
0.0|0.0|1 |
0.731 |
0.625 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF19769 |
A0A7J2TJI3 |
5-181 |
nD2 |
36-110 |
75 |
e1dfuP1 |
1DFU |
239.1.1 |
0.945 |
0.0 |
0.0 |
5.0|6.5|1 |
0.805 |
0.676 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
6 |
no |
no |
PF19769 |
A0A0A7GBR4 |
7-186 |
nD1 |
1-40 |
40 |
e6kf3P1 |
6KF3 |
375.1.1 |
0.931 |
0.955 |
0.966 |
0.0|0.0|0 |
0.753 |
0.714 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF19769 |
A0A0A7GBR4 |
7-186 |
nD2 |
41-115 |
75 |
e5jbhG1 |
5JBH |
239.1.1 |
0.93 |
0.0 |
0.0 |
6.0|6.0|1 |
0.686 |
0.676 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
6 |
no |
no |
PF19769 |
A0A0A7GBR4 |
7-186 |
nD3 |
116-185 |
70 |
e1feuD1 |
1FEU |
239.1.1 |
0.949 |
0.0 |
0.0 |
5.4|7.5|1 |
0.716 |
0.631 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
1 |
6 |
no |
no |
PF19770 |
A0A1B6AUT4 |
12-127 |
nD1 |
6-30,51-80,91-120 |
85 |
e3j2wE1 |
3J2W |
6074.1.1 |
0.874 |
0.182 |
0.609 |
0.0|6.0|0 |
0.505 |
1.545 |
pymol |
more |
good_domain |
extended segments |
Transmembrane helix of E1 envelope glycoprotein |
Transmembrane helix of E1 envelope glycoprotein |
Transmembrane helix of E1 envelope glycoprotein |
3 |
0 |
no |
yes:3 |
PF19773 |
U2HAP9 |
247-542 |
nD2 |
281-660 |
380 |
e2wcsA5 |
2WCS |
2002.1.1 |
0.912 |
0.993 |
0.999 |
20.9|24.3|1 |
0.907 |
1.214 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
8 |
13 |
yes:out |
no |
PF19777 |
A0A1F3NM51 |
62-260 |
nD1 |
6-298 |
293 |
e1lshA1 |
1LSH |
5087.2.1 |
0.905 |
0.912 |
0.948 |
15.4|15.4|1 |
0.828 |
1.069 |
pymol |
more |
good_domain |
beta meanders |
Lipovitellin-phosvitin complex |
Lipovitellin LV-1N |
Lipovitellin LV-1N |
4 |
16 |
no |
no |
PF19777 |
A0A7Y3ASP6 |
49-234 |
nD1 |
1-270 |
270 |
e1lshA1 |
1LSH |
5087.2.1 |
0.899 |
0.759 |
0.95 |
16.8|16.8|1 |
0.806 |
0.985 |
pymol |
more |
good_domain |
beta meanders |
Lipovitellin-phosvitin complex |
Lipovitellin LV-1N |
Lipovitellin LV-1N |
4 |
12 |
no |
no |
PF19779 |
A0A367Y5Y4 |
7-174 |
nD1 |
61-184 |
124 |
e4uxvA1 |
4UXV |
632.22.1 |
0.914 |
0.0 |
0.0 |
7.2|7.3|0 |
0.928 |
1.192 |
pymol |
na |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Cell division protein EzrA repeats |
Cell division protein EzrA repeats |
4 |
0 |
no |
yes:3 |
PF19782 |
A0A2D9ZBC7 |
3-300 |
nD1 |
1-175,241-300 |
235 |
e6n67A1 |
6N67 |
206.1.3 |
0.934 |
0.595 |
0.615 |
7.0|8.1|1 |
0.444 |
1.049 |
pymol |
more |
good_domain |
a+b complex topology |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase/SAICAR synthase/ATP-grasp |
ATP-grasp |
6 |
15 |
no |
no |
PF19783 |
F0S6V6 |
14-300 |
nD1 |
11-300 |
290 |
e3bs0B1 |
3BS0 |
5084.5.4 |
0.921 |
0.976 |
0.983 |
13.7|14.4|1 |
0.79 |
0.69 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
1 |
15 |
yes:in |
no |
PF19783 |
A0A318UFG4 |
23-305 |
nD1 |
26-310 |
285 |
e3pgsA1 |
3PGS |
5084.5.4 |
0.913 |
0.982 |
0.986 |
14.4|15.6|1 |
0.768 |
0.679 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Outer membrane protein transport protein |
2 |
15 |
yes:out |
no |
PF19791 |
A0A0R2B118 |
7-87 |
nD1 |
1-80 |
80 |
e5boiA3 |
5BOI |
243.3.1 |
0.937 |
0.0 |
0.0 |
5.7|5.7|1 |
0.875 |
0.8 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
no |
no |
PF19793 |
A0A5P8RZ85 |
1-117 |
nD1 |
1-80,91-115 |
105 |
e5vo5A1 |
5VO5 |
3291.1.1 |
0.914 |
0.0 |
0.0 |
7.4|8.1|0 |
0.815 |
0.597 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
3 |
1 |
no |
no |
PF19795 |
Q88EA2 |
42-238 |
nD1 |
26-145,276-285 |
130 |
e6bieA1 |
6BIE |
3711.1.1 |
0.929 |
0.981 |
0.984 |
5.4|6.3|0 |
0.998 |
1.171 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
4 |
0 |
yes:out |
no |
PF19795 |
A0A1Q2M3Z7 |
51-241 |
nD1 |
41-150 |
110 |
e3qzcB1 |
3QZC |
3711.1.1 |
0.881 |
0.982 |
0.985 |
4.7|5.5|0 |
0.849 |
0.991 |
pymol |
more |
good_domain |
alpha bundles |
LTXXQ motif family protein |
LTXXQ motif family protein |
LTXXQ motif family protein |
4 |
0 |
yes:out |
no |
PF19796 |
A0A6G7VJX1 |
14-98 |
nD1 |
6-100 |
95 |
e7nhnu1 |
7NHN |
604.9.1 |
0.874 |
0.0 |
0.0 |
6.1|6.1|1 |
0.883 |
1.105 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
4 |
0 |
no |
no |
PF19796 |
A0A176EXD6 |
14-98 |
nD1 |
6-90 |
85 |
e4ji8T1 |
4JI8 |
604.9.1 |
0.898 |
0.0 |
0.0 |
5.5|5.5|1 |
0.863 |
0.988 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
3 |
0 |
no |
no |
PF19796 |
A0A5B8FTE7 |
14-98 |
nD1 |
6-100 |
95 |
e7nhnu1 |
7NHN |
604.9.1 |
0.871 |
0.0 |
0.0 |
6.2|6.2|1 |
0.87 |
1.105 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
4 |
0 |
no |
no |
PF19797 |
A0A6I1YNE3 |
25-117 |
nD1 |
32-125 |
94 |
e5xhbA1 |
5XHB |
270.2.1 |
0.931 |
0.907 |
0.914 |
3.9|3.9|1 |
0.647 |
0.862 |
pymol |
more |
good_domain |
beta barrels |
FMT C-terminal domain-like |
lantibiotic immunity protein SpaI |
lantibiotic immunity protein SpaI |
1 |
7 |
yes:out |
no |
PF19802 |
A0A7K1BAA5 |
23-105 |
nD1 |
1-108 |
108 |
e6tt7H1 |
6TT7 |
192.6.1 |
0.881 |
0.0 |
0.0 |
6.8|6.8|1 |
0.956 |
2.25 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
4 |
0 |
no |
no |
PF19802 |
A0A7X9Q200 |
23-105 |
nD1 |
1-108 |
108 |
e4djgA1 |
4DJG |
605.4.1 |
0.851 |
0.0 |
0.0 |
6.7|6.7|1 |
0.979 |
1.577 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
ROP protein |
ROP protein |
4 |
0 |
no |
no |
PF19802 |
A0A2N3E6Q9 |
24-114 |
nD1 |
6-125 |
120 |
e2gv9B3 |
2GV9 |
4970.1.1 |
0.92 |
0.0 |
0.0 |
6.2|6.2|1 |
0.904 |
0.889 |
pymol |
more |
good_domain |
alpha bundles |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
"fingers" domain in bacteriophage RB69-like DNA polymerase I |
5 |
0 |
no |
no |
PF19803 |
A0A366DU60 |
68-170 |
nD2 |
101-175 |
75 |
e6qfjA1 |
6QFJ |
327.7.1 |
0.894 |
0.0 |
0.0 |
5.4|5.4|1 |
0.886 |
0.893 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
2 |
3 |
yes:out |
yes:out |
PF19804 |
A0A7H8V906 |
1-32 |
nD1 |
1-110 |
110 |
e1ei5A1 |
1EI5 |
9.4.1 |
0.912 |
0.0 |
0.0 |
6.2|6.3|1 |
0.891 |
1.14 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
1 |
7 |
no |
no |
PF19804 |
A0A7H8V3M4 |
1-32 |
nD1 |
1-68,91-110 |
88 |
e1ei5A1 |
1EI5 |
9.4.1 |
0.925 |
0.0 |
0.0 |
6.2|6.3|1 |
0.851 |
0.912 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
D-aminopeptidase, middle and C-terminal domains |
D-aminopeptidase, middle and C-terminal domains |
1 |
7 |
no |
no |
PF19809 |
A0A1V2QAI2 |
20-106 |
nD1 |
16-110 |
95 |
e4g6tA1 |
4G6T |
241.1.1 |
0.878 |
0.324 |
0.0 |
4.0|4.0|1 |
0.649 |
0.714 |
pymol |
more |
good_domain |
a+b two layers |
Type III secretory system chaperone-like |
Type III secretory system chaperone |
Type III secretory system chaperone |
2 |
5 |
no |
no |
PF19811 |
W7SMB1 |
71-158 |
nD1 |
51-158 |
108 |
e4kkrB1 |
4KKR |
11.1.1 |
0.914 |
0.0 |
0.758 |
4.7|5.5|0 |
0.83 |
1.0 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
8 |
yes:out |
no |
PF19811 |
A0A191TND1 |
23-105 |
nD1 |
1-105 |
105 |
e5zi7A3 |
5ZI7 |
11.1.1 |
0.934 |
0.0 |
0.742 |
5.5|6.9|1 |
0.883 |
0.972 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
9 |
no |
no |
PF19814 |
A0A4Q9HQ66 |
82-481 |
nD2 |
81-290 |
210 |
e7jr7B2 |
7JR7 |
1075.1.1 |
0.945 |
0.0 |
0.0 |
8.2|8.2|1 |
0.687 |
0.814 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
ABCG5/ABCG8 transmembrane domain |
7 |
0 |
no |
yes:5 |
PF19814 |
A0A1M6DWF7 |
75-449 |
nD2 |
16-25,76-255 |
190 |
e7jr7B2 |
7JR7 |
1075.1.1 |
0.939 |
0.0 |
0.0 |
7.2|8.8|1 |
0.691 |
0.736 |
pymol |
more |
good_domain |
alpha bundles |
Type II ABC exporter transmembrane domain fold |
Type II ABC exporter transmembrane domain-related |
ABCG5/ABCG8 transmembrane domain |
7 |
0 |
no |
yes:5 |
PF19815 |
A0A1H8IP00 |
473-959 |
nD3 |
571-955 |
385 |
e1ps9A1 |
1PS9 |
2002.1.1 |
0.874 |
0.0 |
0.994 |
8.7|14.5|1 |
0.849 |
1.23 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
10 |
11 |
yes:out |
no |
PF19815 |
A0A1A9I9E8 |
470-956 |
nD3 |
571-655,671-950 |
365 |
e7o0tA1 |
7O0T |
2002.1.1 |
0.897 |
0.0 |
0.994 |
11.3|17.5|1 |
0.833 |
1.166 |
pymol |
more |
good_domain |
a/b barrels |
TIM beta/alpha-barrel |
TIM barrels |
TIM barrels |
10 |
10 |
yes:out |
no |
PF19817 |
A0A0C1XTQ0 |
2-94 |
nD1 |
11-90 |
80 |
e6o0cA1 |
6O0C |
603.1.1 |
0.863 |
0.0 |
0.0 |
2.6|2.6|1 |
0.427 |
0.762 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
2 |
2 |
no |
no |
PF19823 |
A0A1I2TS43 |
44-198 |
nD1 |
36-199 |
164 |
e1ka9H1 |
1KA9 |
2007.1.1 |
0.856 |
0.879 |
0.872 |
7.7|9.1|0 |
0.833 |
0.774 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Class I glutamine amidotransferase-like |
7 |
6 |
yes:out |
no |
PF19828 |
A0A0C2BBJ2 |
1-187 |
nD1 |
1-170 |
170 |
e2hwjA2 |
2HWJ |
876.1.1 |
0.858 |
0.48 |
0.806 |
4.7|4.7|1 |
0.887 |
1.868 |
pymol |
more |
good_domain |
a+b complex topology |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
5 |
6 |
no |
no |
PF19828 |
A0A846DRD5 |
1-170 |
nD1 |
1-173 |
173 |
e2hwjA2 |
2HWJ |
876.1.1 |
0.875 |
0.51 |
0.843 |
4.7|4.7|1 |
0.875 |
1.901 |
pymol |
more |
good_domain |
a+b complex topology |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
5 |
6 |
no |
no |
PF19836 |
A0A399G156 |
1-174 |
nD1 |
6-65 |
60 |
e6k0bG1 |
6K0B |
375.1.1 |
0.864 |
0.0 |
0.641 |
3.2|3.2|1 |
0.624 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
3 |
no |
no |
PF19836 |
A0A399G156 |
1-174 |
nD2 |
71-170 |
100 |
e2epoA1 |
2EPO |
2498.2.1 |
0.872 |
0.0 |
0.0 |
4.5|4.5|1 |
0.802 |
0.725 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
beta-N-acetylhexosaminidase-like domain |
beta-N-acetylhexosaminidase-like domain |
2 |
5 |
no |
no |
PF19836 |
A0A0M8XZ44 |
1-174 |
nD1 |
71-170 |
100 |
e2epoA1 |
2EPO |
2498.2.1 |
0.868 |
0.0 |
0.0 |
4.3|4.3|0 |
0.79 |
0.725 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
beta-N-acetylhexosaminidase-like domain |
beta-N-acetylhexosaminidase-like domain |
3 |
5 |
no |
no |
PF19844 |
A0A2A7MQC3 |
24-143 |
nD1 |
62-144 |
83 |
e3gpvB1 |
3GPV |
101.1.9 |
0.932 |
0.477 |
0.559 |
4.1|4.1|1 |
0.613 |
0.949 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Putative DNA-binding domain |
1 |
3 |
no |
no |
PF19845 |
A0A1M4XIU4 |
41-225 |
nD3 |
81-220 |
140 |
e3qtnB2 |
3QTN |
109.4.1 |
0.855 |
0.0 |
0.0 |
7.5|8.2|0 |
0.853 |
0.49 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
0 |
no |
yes:5 |
PF19855 |
A0A254R240 |
1-69 |
nD1 |
6-60 |
55 |
e4wbdA2 |
4WBD |
375.1.1 |
0.938 |
0.248 |
0.875 |
3.9|3.9|1 |
0.914 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
5 |
no |
no |
PF19855 |
A3VJC4 |
1-69 |
nD1 |
6-60 |
55 |
e4wbdA2 |
4WBD |
375.1.1 |
0.938 |
0.248 |
0.892 |
3.2|3.2|1 |
0.914 |
0.982 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
1 |
5 |
no |
no |
PF19855 |
A3SRY9 |
1-69 |
nD1 |
6-65 |
60 |
e4wbdA2 |
4WBD |
375.1.1 |
0.924 |
0.226 |
0.874 |
3.1|3.1|1 |
0.885 |
1.071 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
4 |
no |
no |
PF19862 |
A0A0F5W0E4 |
8-134 |
nD1 |
11-125 |
115 |
e1sumB3 |
1SUM |
604.5.1 |
0.931 |
0.0 |
0.0 |
6.4|7.4|0 |
0.927 |
1.065 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
PhoU-like (Pfam 01895) |
PhoU-like (Pfam 01895) |
4 |
0 |
no |
yes:2 |
PF19872 |
A0A2U0S351 |
6-235 |
nD1 |
1-235 |
235 |
e4f6oA1 |
4F6O |
7575.1.1 |
0.944 |
0.796 |
0.78 |
10.5|13.1|1 |
0.769 |
0.909 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Caspase-like |
Caspase-like |
Caspase-like |
7 |
11 |
no |
no |
PF19872 |
A0A0U3ME67 |
6-221 |
nD1 |
1-224 |
224 |
e5fc2B2 |
5FC2 |
7575.1.1 |
0.933 |
0.41 |
0.412 |
11.3|14.0|1 |
0.693 |
0.867 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Caspase-like |
Caspase-like |
Caspase-like |
6 |
9 |
no |
no |
PF19872 |
A0A2P2C5L1 |
6-221 |
nD1 |
1-224 |
224 |
e3bijA1 |
3BIJ |
7575.1.1 |
0.901 |
0.414 |
0.394 |
10.9|13.8|1 |
0.842 |
0.867 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Caspase-like |
Caspase-like |
Caspase-like |
5 |
10 |
no |
no |
PF19875 |
L1NZ24 |
32-224 |
nD1 |
11-115 |
105 |
e4dkkA1 |
4DKK |
330.1.1 |
0.905 |
0.0 |
0.575 |
6.3|6.3|1 |
0.861 |
1.304 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
dsRNA-binding domain-like |
dsRNA-binding domain-like |
2 |
5 |
no |
no |
PF19879 |
A3V157 |
2-269 |
nD1 |
1-170,193-303 |
281 |
e7ef9A1 |
7EF9 |
102.1.2 |
0.87 |
0.0 |
0.0 |
2.8|2.9|0 |
0.664 |
1.351 |
pymol |
more |
good_domain |
alpha arrays |
HhH/H2TH |
SAM/DNA-glycosylase |
DNA-glycosylase |
11 |
9 |
no |
no |
PF19880 |
A0A1I7F9Q5 |
18-307 |
nD1 |
1-160 |
160 |
e6tz4O1 |
6TZ4 |
3291.1.1 |
0.913 |
0.0 |
0.0 |
6.5|6.6|0 |
0.813 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
Charged multivesicular body protein 3 (CHMP3)-related |
2 |
1 |
no |
yes:2 |
PF19884 |
A0A109IN67 |
1-410 |
nD2 |
146-250 |
105 |
e1y2mB5 |
1Y2M |
4953.1.1 |
0.863 |
0.0 |
0.0 |
3.9|3.9|1 |
0.57 |
1.228 |
pymol |
more |
good_domain |
alpha arrays |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
L-aspartase C-terminal domain-like |
4 |
1 |
no |
no |
PF19897 |
A0A4Q5QVK9 |
3-75 |
nD1 |
1-80 |
80 |
e3k0yA1 |
3K0Y |
2.18.1 |
0.862 |
0.0 |
0.0 |
5.2|5.2|1 |
0.859 |
1.053 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
OB domain in putative lipoprotein BF3042-related proteins |
OB domain in putative lipoprotein BF3042-related proteins |
1 |
5 |
no |
no |
PF19897 |
A0A358N0I8 |
3-75 |
nD1 |
1-75 |
75 |
e3k0yA1 |
3K0Y |
2.18.1 |
0.865 |
0.0 |
0.0 |
5.7|5.7|1 |
0.829 |
0.987 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
OB domain in putative lipoprotein BF3042-related proteins |
OB domain in putative lipoprotein BF3042-related proteins |
1 |
5 |
no |
no |
PF19897 |
A0A3D3L171 |
5-79 |
nD1 |
1-80 |
80 |
e4j8qA2 |
4J8Q |
2.18.1 |
0.9 |
0.0 |
0.0 |
5.0|6.1|1 |
0.843 |
1.053 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
OB domain in putative lipoprotein BF3042-related proteins |
OB domain in putative lipoprotein BF3042-related proteins |
0 |
5 |
no |
no |
PF19902 |
A0A4Q3G489 |
1-120 |
nD1 |
1-115 |
115 |
e7nkyZ1 |
7NKY |
304.17.1 |
0.851 |
0.0 |
0.0 |
6.2|6.2|1 |
0.772 |
1.139 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
N-utilization substance G protein NusG, N-terminal domain |
N-utilization substance G protein NusG, N-terminal domain |
4 |
4 |
no |
no |
PF19903 |
A0A124IQ09 |
16-128 |
nD1 |
6-125 |
120 |
e6egcA1 |
6EGC |
192.29.1 |
0.939 |
0.0 |
0.0 |
12.1|12.1|1 |
0.798 |
1.579 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
1 |
no |
no |
PF19909 |
A0A416EBX0 |
16-178 |
nD1 |
11-190 |
180 |
e4anoA1 |
4ANO |
206.1.1 |
0.949 |
0.98 |
0.978 |
8.6|12.2|1 |
0.699 |
0.598 |
pymol |
more |
good_domain |
a+b complex topology |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase/SAICAR synthase/ATP-grasp |
Protein kinase |
4 |
7 |
no |
no |
PF19911 |
A0A4R6RF45 |
8-314 |
nD3 |
131-205,291-310 |
95 |
e2oo2A1 |
2OO2 |
632.11.1 |
0.866 |
0.0 |
0.0 |
8.9|9.0|0 |
0.99 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
AF1782-like |
AF1782-like |
3 |
1 |
no |
yes:out |
PF19914 |
E7F259 |
33-112 |
nD1 |
16-115 |
100 |
e4zcvA2 |
4ZCV |
108.1.1 |
0.907 |
0.0 |
0.84 |
5.8|5.8|1 |
0.976 |
1.124 |
pymol |
more |
good_domain |
alpha arrays |
EF-hand |
EF-hand-related |
EF-hand |
5 |
2 |
no |
yes:out |
PF19918 |
A0A4V0HUC1 |
13-237 |
nD1 |
6-95 |
90 |
e3jtoD1 |
3JTO |
304.150.1 |
0.862 |
0.0 |
0.0 |
5.0|5.0|1 |
0.72 |
0.952 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Adapter protein mecA 2 C-terminal domain |
Adapter protein mecA 2 C-terminal domain |
2 |
5 |
no |
no |
PF19918 |
L0DAQ6 |
13-239 |
nD1 |
1-100 |
100 |
e1nh8A1 |
1NH8 |
304.5.1 |
0.881 |
0.0 |
0.0 |
4.5|4.6|1 |
0.847 |
0.917 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
GlnB-like |
GlnB-like |
3 |
6 |
no |
no |
PF19923 |
A0A329J6F3 |
1-147 |
nD1 |
1-134 |
134 |
e4mqdD1 |
4MQD |
3776.1.1 |
0.941 |
0.982 |
0.981 |
10.3|10.3|1 |
0.822 |
1.008 |
pymol |
more |
good_domain |
beta sandwiches |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
2 |
9 |
no |
no |
PF19923 |
A0A240BNW6 |
1-147 |
nD1 |
1-134 |
134 |
e4mqdD1 |
4MQD |
3776.1.1 |
0.937 |
0.979 |
0.98 |
10.4|10.4|1 |
0.822 |
1.008 |
pymol |
more |
good_domain |
beta sandwiches |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
3 |
9 |
no |
no |
PF19923 |
A0A318JD22 |
1-144 |
nD1 |
1-130 |
130 |
e4mqdD1 |
4MQD |
3776.1.1 |
0.94 |
0.979 |
0.98 |
9.9|9.9|1 |
0.798 |
0.977 |
pymol |
more |
good_domain |
beta sandwiches |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
DNA-entry nuclease inhibitor |
3 |
9 |
no |
no |
PF19925 |
A0A3R8ZY63 |
1-107 |
nD1 |
6-75 |
70 |
e1s8nA2 |
1S8N |
103.12.1 |
0.852 |
0.0 |
0.0 |
3.9|4.4|1 |
0.796 |
1.148 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
ANTAR domain |
ANTAR domain |
4 |
0 |
no |
no |
PF19927 |
A0A7J4JNN6 |
2-240 |
nD1 |
1-240 |
240 |
e5mp9L3 |
5MP9 |
2.1.1 |
0.908 |
0.0 |
0.932 |
3.7|4.8|0 |
0.904 |
2.308 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
10 |
7 |
no |
no |
PF19927 |
A0A7J4KJN6 |
2-240 |
nD1 |
1-240 |
240 |
e6hedI1 |
6HED |
2.1.1 |
0.867 |
0.0 |
0.933 |
2.9|4.8|0 |
0.9 |
2.308 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
10 |
7 |
no |
no |
PF19929 |
A0A1D3K1N6 |
6-150 |
nD1 |
1-153 |
153 |
e4dm5B1 |
4DM5 |
809.1.1 |
0.876 |
0.959 |
0.969 |
6.2|7.0|0 |
0.926 |
1.832 |
pymol |
more |
good_domain |
a+b two layers |
BLIP-like |
beta-lactamase-inhibitor protein, BLIP |
beta-lactamase-inhibitor protein, BLIP |
3 |
9 |
no |
no |
PF19929 |
A0A3S0M810 |
6-150 |
nD1 |
1-153 |
153 |
e4dm5B1 |
4DM5 |
809.1.1 |
0.876 |
0.959 |
0.969 |
6.2|7.1|0 |
0.926 |
1.832 |
pymol |
more |
good_domain |
a+b two layers |
BLIP-like |
beta-lactamase-inhibitor protein, BLIP |
beta-lactamase-inhibitor protein, BLIP |
3 |
9 |
no |
no |
PF19929 |
A0A2N7YF80 |
6-150 |
nD1 |
1-153 |
153 |
e4dm5B1 |
4DM5 |
809.1.1 |
0.876 |
0.959 |
0.969 |
6.2|7.1|0 |
0.926 |
1.832 |
pymol |
more |
good_domain |
a+b two layers |
BLIP-like |
beta-lactamase-inhibitor protein, BLIP |
beta-lactamase-inhibitor protein, BLIP |
3 |
9 |
no |
no |
PF19930 |
A0A357N7A7 |
2-97 |
nD1 |
1-95 |
95 |
e7rj5E1 |
7RJ5 |
809.1.1 |
0.874 |
0.962 |
0.967 |
5.4|6.1|0 |
0.915 |
1.138 |
pymol |
more |
good_domain |
a+b two layers |
BLIP-like |
beta-lactamase-inhibitor protein, BLIP |
beta-lactamase-inhibitor protein, BLIP |
3 |
6 |
no |
no |
PF19931 |
E0USF8 |
32-121 |
nD1 |
1-125 |
125 |
e6egcA1 |
6EGC |
192.29.1 |
0.936 |
0.0 |
0.0 |
13.2|13.2|1 |
0.821 |
1.645 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF19931 |
A0A800MQR5 |
32-122 |
nD1 |
6-125 |
120 |
e6egcA1 |
6EGC |
192.29.1 |
0.936 |
0.0 |
0.0 |
12.5|12.5|1 |
0.794 |
1.579 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF19931 |
A0A836X9Y6 |
32-122 |
nD1 |
6-125 |
120 |
e6egcA1 |
6EGC |
192.29.1 |
0.935 |
0.0 |
0.0 |
12.5|12.5|1 |
0.787 |
1.579 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
4 |
0 |
no |
yes:4 |
PF19940 |
D3V9D0 |
22-278 |
nD1 |
21-210,241-280 |
230 |
e4fzmA1 |
4FZM |
3173.1.1 |
0.856 |
0.134 |
0.131 |
4.3|4.7|1 |
0.602 |
0.844 |
pymol |
more |
good_domain |
a+b complex topology |
Colicin M-related |
Colicin M-related |
Colicin M-related |
8 |
8 |
no |
no |
PF19945 |
O34795 |
1-96 |
nD1 |
6-95 |
90 |
e6rwxU1 |
6RWX |
327.13.1 |
0.856 |
0.0 |
0.0 |
3.6|3.6|1 |
0.838 |
0.882 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif I in type III secretion system |
Ring-building motif I in type III secretion system |
3 |
3 |
no |
no |
PF19945 |
A0A4Q0VS99 |
1-88 |
nD1 |
1-88 |
88 |
e6q16E3 |
6Q16 |
327.13.1 |
0.855 |
0.0 |
0.0 |
4.0|4.1|1 |
0.602 |
0.863 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif I in type III secretion system |
Ring-building motif I in type III secretion system |
3 |
3 |
no |
no |
PF19948 |
A0A1K0FTM9 |
89-280 |
nD1 |
6-288 |
283 |
e6rqfA1 |
6RQF |
5069.1.1 |
0.866 |
0.0 |
0.0 |
6.7|6.7|1 |
0.653 |
1.335 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
10 |
1 |
no |
yes:8 |
PF19952 |
S7YMI1 |
38-251 |
nD1 |
6-30,76-120,151-250 |
170 |
e4gs3A1 |
4GS3 |
2.1.1 |
0.948 |
0.0 |
0.0 |
5.5|5.5|1 |
0.877 |
1.635 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
6 |
7 |
no |
no |
PF19952 |
A0A5J6PUK0 |
14-252 |
nD1 |
1-20,51-120,151-210,241-255 |
165 |
e3m4pD1 |
3M4P |
2.1.1 |
0.932 |
0.0 |
0.0 |
5.4|5.4|1 |
0.854 |
1.587 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
6 |
7 |
no |
no |
PF19955 |
A7IBU6 |
736-819 |
nD4 |
731-824 |
94 |
e2d96A1 |
2D96 |
110.1.1 |
0.894 |
0.0 |
0.0 |
4.8|4.8|1 |
0.878 |
0.979 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF19960 |
A0A160T984 |
9-70 |
nD1 |
1-75 |
75 |
e2o71A1 |
2O71 |
110.1.1 |
0.906 |
0.0 |
0.643 |
6.0|6.7|1 |
0.848 |
0.781 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
4 |
1 |
no |
no |
PF19961 |
A0A3A0GB98 |
9-99 |
nD1 |
1-105 |
105 |
e6jccA1 |
6JCC |
110.1.1 |
0.91 |
0.0 |
0.0 |
5.7|5.7|0 |
0.912 |
1.094 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
2 |
no |
no |
PF19964 |
A0A7Y5VDX9 |
5-82 |
nD1 |
1-90 |
90 |
e6bfiB5 |
6BFI |
601.1.1 |
0.853 |
0.0 |
0.0 |
9.2|9.2|1 |
0.804 |
0.687 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
4 |
0 |
no |
no |
PF19966 |
A0A2R4CBE8 |
257-363 |
nD2 |
261-360 |
100 |
e2bbzB1 |
2BBZ |
110.1.1 |
0.923 |
0.0 |
0.0 |
5.4|5.4|1 |
0.861 |
1.042 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
6 |
0 |
no |
no |
PF19968 |
A0A7K1L2G2 |
208-363 |
nD2 |
256-325 |
70 |
e6mksE1 |
6MKS |
110.1.1 |
0.857 |
0.0 |
0.0 |
5.4|5.4|1 |
0.766 |
0.729 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
4 |
0 |
no |
no |
PF19973 |
A9B4X0 |
6-105 |
nD1 |
6-110 |
105 |
e6i0oB2 |
6I0O |
282.1.1 |
0.922 |
0.0 |
0.0 |
6.7|7.7|1 |
0.814 |
0.792 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
CBS-domain |
CBS-domain |
CBS-domain |
2 |
7 |
yes:in |
no |
PF19973 |
A0A1V4V002 |
10-110 |
nD1 |
1-115 |
115 |
e2yziB1 |
2YZI |
282.1.1 |
0.908 |
0.0 |
0.0 |
7.8|9.3|1 |
0.832 |
0.868 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
CBS-domain |
CBS-domain |
CBS-domain |
2 |
7 |
no |
no |
PF19973 |
A0A523ZYN5 |
10-106 |
nD1 |
1-110 |
110 |
e1pbjA1 |
1PBJ |
282.1.1 |
0.93 |
0.0 |
0.0 |
7.8|9.7|1 |
0.834 |
0.83 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
CBS-domain |
CBS-domain |
CBS-domain |
3 |
7 |
no |
no |
PF19974 |
B4VVE6 |
284-799 |
nD2 |
441-575 |
135 |
e5zg8A1 |
5ZG8 |
2.1.1 |
0.914 |
0.0 |
0.0 |
4.3|4.3|1 |
0.792 |
1.298 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
7 |
no |
no |
PF19979 |
A0A345HNE8 |
10-98 |
nD1 |
1-100 |
100 |
e1wwpA1 |
1WWP |
601.7.1 |
0.876 |
0.0 |
0.0 |
8.7|8.7|1 |
0.807 |
0.709 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
4 |
0 |
no |
no |
PF19985 |
A0A0Q6RKS3 |
41-489 |
nD1 |
36-200,226-485 |
425 |
e7pfsA2 |
7PFS |
2498.1.1 |
0.883 |
0.0 |
1.0 |
3.9|19.4|1 |
0.612 |
1.693 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
14 |
6 |
no |
no |
PF19985 |
A0A075JM45 |
26-472 |
nD1 |
21-470 |
450 |
e4kxdA1 |
4KXD |
2498.1.1 |
0.858 |
0.0 |
0.999 |
4.1|19.8|1 |
0.638 |
1.793 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
15 |
7 |
no |
no |
PF19991 |
A0A1H3MDK4 |
23-179 |
nD1 |
31-105 |
75 |
e3j09A2 |
3J09 |
304.3.1 |
0.917 |
0.939 |
0.985 |
7.1|8.3|0 |
0.906 |
1.042 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
HMA-related |
HMA, heavy metal-associated domain |
4 |
3 |
yes:out |
no |
PF19991 |
U2RAX0 |
2-153 |
nD2 |
96-155 |
60 |
e2e5yA2 |
2E5Y |
192.6.1 |
0.864 |
0.0 |
0.0 |
3.2|3.2|1 |
0.828 |
1.25 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
Epsilon subunit of F1F0-ATP synthase C-terminal domain |
3 |
0 |
no |
no |
PF19997 |
E8R014 |
295-546 |
nD2 |
251-275,356-545 |
215 |
e6nmiE3 |
6NMI |
2006.1.6 |
0.944 |
0.0 |
0.095 |
7.5|7.9|0 |
0.767 |
1.019 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
vWA-like |
6 |
6 |
no |
no |
PF19997 |
A0A1I1YB93 |
260-472 |
nD3 |
216-245,321-474 |
184 |
e5vaeA1 |
5VAE |
7512.1.1 |
0.911 |
0.0 |
0.0 |
7.9|7.9|1 |
0.699 |
0.92 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
UDP-Glycosyltransferase/glycogen phosphorylase |
6 |
7 |
no |
no |
PF20000 |
F8B3Y9 |
1-254 |
nD3 |
31-100,196-250 |
125 |
e1kfqA1 |
1KFQ |
331.2.1 |
0.945 |
0.0 |
0.724 |
7.9|7.9|1 |
0.82 |
1.269 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Phosphoglucomutase, C-terminal domain |
Phosphoglucomutase, C-terminal domain |
2 |
7 |
no |
no |
PF20002 |
A0A351MGT3 |
1-76 |
nD1 |
1-65 |
65 |
e4hlbA1 |
4HLB |
327.7.1 |
0.861 |
0.0 |
0.0 |
4.2|4.2|1 |
0.579 |
0.774 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Cation efflux protein cytoplasmic domain-like |
Cation efflux protein cytoplasmic domain-like |
2 |
3 |
no |
no |
PF20003 |
A0A3B8LMC2 |
1-189 |
nD2 |
21-85,131-165 |
100 |
e6uepB2 |
6UEP |
331.1.1 |
0.898 |
0.0 |
0.0 |
7.2|7.7|0 |
0.898 |
1.058 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
3 |
5 |
no |
no |
PF20003 |
A0A2E9R5S2 |
1-189 |
nD1 |
21-85,141-165 |
90 |
e2z8uQ2 |
2Z8U |
331.1.1 |
0.902 |
0.0 |
0.0 |
7.2|7.7|0 |
0.82 |
0.952 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
TATA-box binding protein-like |
TATA-box binding protein-like |
3 |
5 |
no |
no |
PF20005 |
A0A1H2AJ12 |
58-480 |
nD1 |
56-160 |
105 |
e4fb3A1 |
4FB3 |
304.55.1 |
0.931 |
0.0 |
0.0 |
5.8|5.8|1 |
0.759 |
0.658 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Origin of replication-binding domains |
4 |
6 |
no |
no |
PF20005 |
A0A1H2AJ12 |
58-480 |
nD2 |
161-305 |
145 |
e1vi7A1 |
1VI7 |
304.24.1 |
0.912 |
0.0 |
0.0 |
5.4|5.4|1 |
0.933 |
1.585 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
EF-G C-terminal domain-like |
EF-G C-terminal domain-like |
3 |
7 |
no |
no |
PF20005 |
A6GJW3 |
1-397 |
nD2 |
81-220 |
140 |
e2cz4A1 |
2CZ4 |
304.5.1 |
0.905 |
0.0 |
0.0 |
7.0|7.0|1 |
0.779 |
1.284 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
GlnB-like |
GlnB-like |
2 |
7 |
no |
no |
PF20006 |
A0A1D7Y4Y5 |
113-192 |
nD2 |
116-190 |
75 |
e1ygyA1 |
1YGY |
304.8.1 |
0.9 |
0.0 |
0.0 |
7.7|7.7|1 |
0.853 |
0.893 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
ACT-like |
ACT-like |
2 |
4 |
no |
no |
PF20009 |
A0A1Z5SGT9 |
451-526 |
nD2 |
371-530 |
160 |
e1doaB1 |
1DOA |
11.1.1 |
0.942 |
0.0 |
0.0 |
7.2|7.6|1 |
0.922 |
1.481 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
0 |
11 |
yes:out |
no |
PF20013 |
A0A1I4WTM0 |
6-138 |
nD1 |
6-145 |
140 |
e4zy8A1 |
4ZY8 |
223.2.1 |
0.918 |
0.0 |
0.0 |
5.6|5.6|1 |
0.733 |
1.0 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
profilin-like |
profilin-like |
2 |
5 |
no |
no |
PF20013 |
A0A2P4UE88 |
1-135 |
nD1 |
1-135 |
135 |
e6ekkB1 |
6EKK |
223.2.1 |
0.944 |
0.0 |
0.0 |
5.4|5.6|1 |
0.793 |
0.964 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
profilin-like |
profilin-like |
1 |
5 |
no |
no |
PF20014 |
A0A1G9VAT5 |
159-263 |
nD2 |
146-325 |
180 |
e3v42B1 |
3V42 |
2004.5.1 |
0.913 |
0.0 |
0.0 |
8.7|8.7|1 |
0.777 |
0.835 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
Differentially expressed in normal cells and neoplasia (DENN) domain |
Differentially expressed in normal cells and neoplasia (DENN) domain |
6 |
4 |
no |
yes:out |
PF20018 |
I4HIS7 |
256-383 |
nD2 |
256-380 |
125 |
e1bu2A2 |
1BU2 |
101.1.10 |
0.854 |
0.0 |
0.0 |
4.7|5.2|1 |
0.862 |
0.947 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
Cyclin-like |
6 |
1 |
no |
no |
PF20020 |
A0A6H1R8T6 |
21-111 |
nD1 |
1-70 |
70 |
e6ckyB2 |
6CKY |
211.1.1 |
0.935 |
0.0 |
0.0 |
5.0|5.0|1 |
0.819 |
1.029 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
1 |
6 |
no |
no |
PF20022 |
A0A1T3P616 |
275-389 |
nD2 |
281-370 |
90 |
e6n2mB1 |
6N2M |
110.1.1 |
0.944 |
0.0 |
0.0 |
5.6|5.8|1 |
0.859 |
0.938 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
5 |
0 |
no |
no |
PF20028 |
A0A251W8M5 |
338-577 |
nD3 |
321-585 |
265 |
e2nrvA2 |
2NRV |
2484.1.1 |
0.948 |
0.0 |
0.0 |
5.3|7.3|1 |
0.85 |
1.352 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Ribonuclease H-like |
Ribonuclease H-like |
Ribonuclease H-like |
9 |
12 |
no |
no |
PF20045 |
Q7VC44 |
1-75 |
nD1 |
6-70 |
65 |
e6c48B1 |
6C48 |
7025.1.1 |
0.873 |
0.0 |
0.0 |
4.1|4.1|1 |
0.944 |
1.204 |
pymol |
more |
good_domain |
alpha bundles |
LIN9-LIN52 heterodimer |
LIN9-LIN52 heterodimer |
LIN9-LIN52 heterodimer |
2 |
2 |
no |
no |
PF20046 |
A0A7C1D313 |
2-149 |
nD2 |
86-160 |
75 |
e4fmtA4 |
4FMT |
605.1.1 |
0.853 |
0.0 |
0.0 |
6.5|8.1|0 |
0.918 |
1.027 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
3 |
0 |
no |
no |
PF20050 |
F3PPI0 |
59-161 |
nD1 |
33-160 |
128 |
e2ww8A3 |
2WW8 |
11.1.4 |
0.878 |
0.0 |
0.0 |
5.2|6.3|0 |
0.818 |
1.024 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
9 |
yes:out |
no |
PF20050 |
A0A5P8E9T1 |
37-143 |
nD1 |
16-145 |
130 |
e1uwyA1 |
1UWY |
11.1.4 |
0.885 |
0.0 |
0.455 |
3.7|7.6|0 |
0.981 |
1.04 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Prealbumin-like |
0 |
9 |
no |
no |
PF20052 |
A0A1I4WTM0 |
274-768 |
nD3 |
316-775 |
460 |
e6j6gd1 |
6J6G |
109.4.1 |
0.927 |
0.0 |
0.0 |
5.5|7.7|1 |
0.421 |
1.608 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
21 |
0 |
no |
no |
PF20052 |
A0A1C5E6H5 |
304-838 |
nD2 |
311-620 |
310 |
e4k6jA1 |
4K6J |
109.4.1 |
0.914 |
0.0 |
0.0 |
5.3|7.6|1 |
0.553 |
1.084 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
12 |
0 |
no |
no |
PF20054 |
D6XL11 |
15-82 |
nD1 |
41-65,146-160 |
40 |
e2qshA2 |
2QSH |
3609.1.1 |
0.947 |
0.0 |
0.0 |
4.2|4.3|1 |
0.773 |
0.748 |
pymol |
more |
good_domain |
alpha arrays |
DNA repair protein RAD4 beta-hairpin domain |
DNA repair protein RAD4 beta-hairpin domain |
DNA repair protein RAD4 beta-hairpin domain |
2 |
3 |
no |
no |
PF20055 |
A0A2N4XG91 |
7-298 |
nD1 |
11-295 |
285 |
e6damA1 |
6DAM |
5.1.5 |
0.941 |
0.987 |
0.991 |
8.8|19.3|0 |
0.383 |
0.733 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
8-bladed |
2 |
18 |
yes:in |
no |
PF20055 |
G9MW87 |
59-360 |
nD1 |
56-370 |
315 |
e2iwaA1 |
2IWA |
5.1.4 |
0.896 |
0.993 |
0.995 |
18.4|18.4|1 |
0.951 |
0.877 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
20 |
no |
yes:out |
PF20055 |
A0A1B2EL08 |
20-321 |
nD1 |
21-320 |
300 |
e5n1aB2 |
5N1A |
5.1.4 |
0.925 |
0.967 |
0.996 |
6.3|18.6|1 |
0.626 |
0.836 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
21 |
yes:in |
no |
PF20056 |
A0A0P1H3F7 |
1-85 |
nD1 |
6-80 |
75 |
e6ktbA2 |
6KTB |
183.1.1 |
0.854 |
0.0 |
0.0 |
3.5|3.5|1 |
0.645 |
0.987 |
pymol |
na |
good_domain |
alpha duplicates or obligate multimers |
Iron-dependent repressor protein, dimerization domain |
Iron-dependent repressor protein, dimerization domain |
Iron-dependent repressor protein, dimerization domain |
3 |
0 |
no |
no |
PF20058 |
A0A166Q5V1 |
19-99 |
nD1 |
21-90 |
70 |
e6fmlE1 |
6FML |
148.1.3 |
0.894 |
0.0 |
0.0 |
5.2|5.2|1 |
0.697 |
0.753 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
4 |
0 |
no |
no |
PF20058 |
A0A0Q7TW81 |
6-90 |
nD1 |
11-85 |
75 |
e2k0nA1 |
2K0N |
103.4.1 |
0.88 |
0.0 |
0.0 |
6.1|7.0|0 |
0.797 |
0.773 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
Elongation factor TFIIS domain 2/ Kix domain of creb binding protein |
4 |
0 |
no |
no |
PF20061 |
A0A4Y6S274 |
43-77 |
nD1 |
1-75 |
75 |
e7n8oX1 |
7N8O |
3493.1.1 |
0.903 |
0.595 |
0.0 |
0.0|4.0|0 |
0.683 |
2.113 |
pymol |
more |
good_domain |
extended segments |
Photosystem II PsbX protein |
Photosystem II PsbX protein |
Photosystem II PsbX protein |
3 |
0 |
yes:in |
yes:1 |
PF20065 |
A0A3S1FTQ1 |
17-118 |
nD1 |
6-70 |
65 |
e5o60W2 |
5O60 |
239.1.1 |
0.895 |
0.0 |
0.0 |
4.4|5.0|1 |
0.724 |
0.586 |
pymol |
more |
good_domain |
beta barrels |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
Ribosomal protein L25-like |
0 |
5 |
no |
no |
PF20070 |
A0A2M9HN04 |
19-164 |
nD1 |
11-95,121-140 |
105 |
e4p1nB1 |
4P1N |
604.12.1 |
0.87 |
0.0 |
0.0 |
8.6|9.4|0 |
0.92 |
1.214 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
4 |
0 |
yes:in |
no |
PF20079 |
G7HXU5 |
1-210 |
nD5 |
121-205 |
85 |
e6zhiB2 |
6ZHI |
632.7.1 |
0.928 |
0.0 |
0.0 |
9.1|9.1|1 |
0.684 |
0.817 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
4 |
0 |
no |
no |
PF20086 |
A0A1H9W3U3 |
4-257 |
nD2 |
71-255 |
185 |
e5w6hA2 |
5W6H |
10.1.2 |
0.949 |
0.0 |
0.408 |
11.3|13.6|1 |
0.949 |
1.178 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
13 |
no |
no |
PF20090 |
A0A3S0MST4 |
1-97 |
nD1 |
1-95 |
95 |
e6zj3Lz1 |
6ZJ3 |
896.1.1 |
0.869 |
0.0 |
0.0 |
5.1|5.1|1 |
0.885 |
1.242 |
pymol |
more |
good_domain |
a+b two layers |
SRP9/14-like |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related |
2 |
7 |
no |
no |
PF20091 |
A0A0D8HP07 |
11-449 |
nD1 |
6-455 |
450 |
e6g21A1 |
6G21 |
7579.1.1 |
0.945 |
0.819 |
0.95 |
13.8|15.4|1 |
0.818 |
1.579 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
alpha/beta-Hydrolases |
10 |
15 |
no |
no |
PF20094 |
A0A074L4J3 |
239-410 |
nD1 |
31-265,316-395 |
315 |
e4lmhD4 |
4LMH |
11.1.1 |
0.941 |
0.0 |
0.0 |
5.9|8.9|1 |
0.905 |
2.917 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
4 |
18 |
yes:out |
no |
PF20097 |
A0A2K2TY44 |
3-69 |
nD1 |
1-70 |
70 |
e7ae1I2 |
7AE1 |
375.1.1 |
0.905 |
0.566 |
0.969 |
2.6|2.6|1 |
0.903 |
1.25 |
pymol |
na |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
4 |
no |
no |
PF20098 |
A0A2N1DDC6 |
1-108 |
nD1 |
26-110 |
85 |
e5boiA2 |
5BOI |
243.3.1 |
0.941 |
0.909 |
0.95 |
6.9|6.9|1 |
0.917 |
0.85 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF20098 |
A0A2S0V246 |
1-108 |
nD1 |
26-110 |
85 |
e5boiA2 |
5BOI |
243.3.1 |
0.942 |
0.905 |
0.949 |
7.8|7.8|1 |
0.915 |
0.85 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
3 |
3 |
yes:out |
no |
PF20098 |
A0A7W2N8V8 |
1-108 |
nD1 |
26-110 |
85 |
e5boiA2 |
5BOI |
243.3.1 |
0.948 |
0.901 |
0.946 |
7.8|7.8|1 |
0.915 |
0.85 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Cystatin/monellin |
Cystatin/monellin |
2 |
4 |
yes:out |
no |
PF20101 |
A0A2M9E6N4 |
5-143 |
nD1 |
31-140 |
110 |
e3nm7A1 |
3NM7 |
295.1.1 |
0.935 |
0.0 |
0.0 |
2.5|2.5|1 |
0.751 |
0.902 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
2 |
9 |
yes:out |
no |
PF20101 |
A0A0R0CI49 |
1-141 |
nD1 |
26-140 |
115 |
e4bg7A1 |
4BG7 |
295.1.1 |
0.918 |
0.0 |
0.0 |
2.7|2.7|1 |
0.765 |
0.943 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
2 |
9 |
yes:out |
no |
PF20109 |
A0A239IKD2 |
1-68 |
nD1 |
11-60 |
50 |
e2dmsA1 |
2DMS |
101.1.1 |
0.864 |
0.0 |
0.0 |
2.3|2.3|1 |
0.549 |
0.685 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
0 |
no |
no |
PF20114 |
A0A0P6YAX8 |
1-120 |
nD1 |
6-55,81-120 |
90 |
e6o65D1 |
6O65 |
3699.1.1 |
0.865 |
0.0 |
0.0 |
4.2|4.2|1 |
0.869 |
1.552 |
pymol |
more |
good_domain |
beta meanders |
Spermidine synthase tetramerisation domain |
Spermidine synthase tetramerisation domain |
Spermidine synthase tetramerisation domain |
0 |
6 |
no |
no |
PF20114 |
A0A1H2GTI3 |
1-106 |
nD1 |
6-105 |
100 |
e3ulxA1 |
3ULX |
708.1.1 |
0.939 |
0.0 |
0.0 |
3.6|4.1|0 |
0.628 |
1.149 |
pymol |
more |
good_domain |
beta complex topology |
ETN0001 domain-like |
ETN0001 domain-like |
NAC/WRKY/GCM/WOPR domain |
1 |
6 |
no |
no |
PF20115 |
A0A7W2BMB3 |
1-145 |
nD1 |
1-140 |
140 |
e4m70B1 |
4M70 |
103.9.1 |
0.863 |
0.618 |
0.292 |
2.4|2.4|1 |
0.527 |
1.647 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RanGAP2 N-terminal domain |
RanGAP2 N-terminal domain |
3 |
6 |
no |
no |
PF20115 |
A0A316G1H3 |
2-155 |
nD1 |
43-140 |
98 |
e4m70B1 |
4M70 |
103.9.1 |
0.896 |
0.627 |
0.286 |
2.7|2.7|1 |
0.527 |
1.153 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RanGAP2 N-terminal domain |
RanGAP2 N-terminal domain |
3 |
4 |
no |
no |
PF20115 |
A0A2A5GAN6 |
1-157 |
nD1 |
1-140 |
140 |
e4m70B1 |
4M70 |
103.9.1 |
0.88 |
0.6 |
0.282 |
2.7|2.7|1 |
0.527 |
1.647 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RanGAP2 N-terminal domain |
RanGAP2 N-terminal domain |
3 |
6 |
no |
no |
PF20116 |
A0A3N6EW84 |
3-99 |
nD1 |
1-105 |
105 |
e2q5cD1 |
2Q5C |
2007.1.10 |
0.864 |
0.77 |
0.845 |
7.1|7.3|0 |
0.911 |
1.117 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
PrpR receptor domain-like |
3 |
5 |
no |
no |
PF20116 |
A0A2N3AIX0 |
4-97 |
nD1 |
1-100 |
100 |
e4ix1A2 |
4IX1 |
2007.1.5 |
0.926 |
0.0 |
0.641 |
6.7|7.0|0 |
0.812 |
0.833 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
ATC-like |
3 |
5 |
no |
no |
PF20120 |
A0A3N5S5R9 |
2-80 |
nD1 |
6-80 |
75 |
e5jbhW1 |
5JBH |
375.1.1 |
0.935 |
0.892 |
0.963 |
3.4|4.2|1 |
0.773 |
1.339 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
7 |
no |
no |
PF20120 |
A0A181ZB27 |
4-81 |
nD1 |
6-80 |
75 |
e5jbhW1 |
5JBH |
375.1.1 |
0.928 |
0.897 |
0.967 |
3.8|4.4|1 |
0.751 |
1.339 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
3 |
7 |
no |
no |
PF20120 |
A0A3N5V5J0 |
2-80 |
nD1 |
6-80 |
75 |
e1qxfA1 |
1QXF |
375.1.1 |
0.929 |
0.894 |
0.965 |
4.0|4.4|1 |
0.876 |
1.339 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
2 |
7 |
no |
no |
PF20123 |
Q57571 |
6-89 |
nD1 |
6-120 |
115 |
e4djdC1 |
4DJD |
7595.1.1 |
0.945 |
0.952 |
0.978 |
10.6|10.7|1 |
0.746 |
0.906 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
4 |
4 |
no |
no |
PF20123 |
A0A843C1K8 |
2-85 |
nD1 |
1-120 |
120 |
e4djdC1 |
4DJD |
7595.1.1 |
0.947 |
0.958 |
0.979 |
10.6|11.0|1 |
0.762 |
0.945 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit |
5 |
5 |
no |
no |
PF20129 |
A0A0K8QPJ4 |
1-578 |
nD1 |
21-170,496-520 |
175 |
e4l99B2 |
4L99 |
4166.1.1 |
0.901 |
0.0 |
0.0 |
8.1|8.1|1 |
0.747 |
1.115 |
pymol |
more |
good_domain |
beta sandwiches |
Lactophage receptor-binding protein N-terminal domain-like |
Lactophage receptor-binding protein N-terminal domain-like |
Lactophage receptor-binding protein N-terminal domain-like |
2 |
9 |
no |
no |
PF20129 |
A0A0K8QPJ4 |
1-578 |
nD3 |
256-495 |
240 |
e4zkdA2 |
4ZKD |
1.1.7 |
0.92 |
0.0 |
0.0 |
6.7|7.0|1 |
0.912 |
2.162 |
pymol |
more |
good_domain |
beta barrels |
cradle loop barrel |
RIFT-related |
Alanine racemase-C |
1 |
15 |
no |
no |
PF20133 |
K9SAV7 |
1-145 |
nD1 |
26-120 |
95 |
e3egrA1 |
3EGR |
3115.5.1 |
0.945 |
0.627 |
0.751 |
5.3|5.3|1 |
0.887 |
1.508 |
pymol |
na |
good_domain |
a+b two layers |
GP2-like |
phenylacetate-CoA oxygenase subunit PaaB |
phenylacetate-CoA oxygenase subunit PaaB |
2 |
3 |
no |
no |
PF20135 |
A0A1H4UVH8 |
1-78 |
nD1 |
16-80 |
65 |
e3lcuA2 |
3LCU |
103.1.1 |
0.87 |
0.0 |
0.259 |
3.6|4.2|0 |
0.903 |
1.14 |
pymol |
more |
good_domain |
alpha arrays |
RuvA-C |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
RuvA-C, UBA, CRAL/TRIO-N, HBS1 |
4 |
0 |
no |
no |
PF20137 |
A0A1J0WH34 |
34-97 |
nD1 |
1-95 |
95 |
e2ci8A1 |
2CI8 |
214.1.1 |
0.876 |
0.0 |
0.0 |
2.9|4.1|1 |
0.455 |
0.856 |
pymol |
more |
good_domain |
a+b two layers |
SH2 |
SH2 |
SH2 |
1 |
7 |
no |
no |
PF20138 |
A0A108TD96 |
1-328 |
nD1 |
36-328 |
293 |
e6l6rA1 |
6L6R |
5.1.3 |
0.91 |
0.992 |
0.996 |
23.7|23.7|1 |
0.938 |
0.847 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
6-bladed |
1 |
22 |
yes:out |
no |
PF20138 |
U2P8R6 |
5-315 |
nD1 |
16-315 |
300 |
e6qk7B2 |
6QK7 |
5.1.4 |
0.917 |
0.993 |
0.998 |
13.2|23.7|0 |
0.733 |
0.836 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
22 |
yes:out |
no |
PF20138 |
W4UUT7 |
1-327 |
nD1 |
26-325 |
300 |
e5n1aB2 |
5N1A |
5.1.4 |
0.887 |
0.989 |
0.997 |
9.2|23.8|0 |
0.715 |
0.836 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
24 |
yes:out |
no |
PF20139 |
D9XR08 |
1-172 |
nD1 |
6-170 |
165 |
e4o7gB1 |
4O7G |
5069.1.1 |
0.934 |
0.948 |
0.963 |
7.9|10.2|0 |
0.801 |
0.778 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
5 |
1 |
yes:in |
yes:4 |
PF20139 |
A0A545AGU2 |
4-172 |
nD1 |
6-170 |
165 |
e4o7gB1 |
4O7G |
5069.1.1 |
0.949 |
0.933 |
0.956 |
7.4|7.6|0 |
0.805 |
0.778 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
5 |
0 |
yes:in |
yes:4 |
PF20139 |
A0A437PCN3 |
5-171 |
nD1 |
6-170 |
165 |
e5zleA1 |
5ZLE |
5069.1.1 |
0.931 |
0.957 |
0.966 |
7.9|9.1|1 |
0.789 |
0.778 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
5 |
1 |
yes:in |
yes:4 |
PF20140 |
A0A2X3H8B9 |
1-158 |
nD1 |
6-158 |
153 |
e4bg7A1 |
4BG7 |
295.1.1 |
0.893 |
0.0 |
0.0 |
4.0|4.0|1 |
0.914 |
1.254 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
2 |
6 |
no |
no |
PF20146 |
A0A7M7L3T3 |
1-103 |
nD1 |
1-130,216-230,301-325 |
170 |
e2yx5A1 |
2YX5 |
304.100.1 |
0.853 |
0.0 |
0.0 |
4.7|4.7|1 |
0.773 |
2.024 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
PurS-like |
PurS-like |
5 |
5 |
no |
yes:out |
PF20151 |
K5XMW2 |
24-69 |
nD1 |
6-195 |
190 |
e6kuxA2 |
6KUX |
5001.1.1 |
0.892 |
0.106 |
0.0 |
8.7|9.3|1 |
0.573 |
0.665 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
5 |
2 |
no |
yes:4 |
PF20153 |
A0A165NAD2 |
8-184 |
nD3 |
16-55,91-130,151-230 |
160 |
e4hksA1 |
4HKS |
3562.1.1 |
0.902 |
0.531 |
0.348 |
9.5|11.7|0 |
0.809 |
0.851 |
pymol |
more |
good_domain |
alpha bundles |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
Calcium release-activated calcium channel protein 1 |
4 |
0 |
no |
yes:4 |
PF20155 |
M1SBC3 |
82-271 |
nD2 |
81-270 |
190 |
e5cwcA1 |
5CWC |
159.1.2 |
0.871 |
0.0 |
0.0 |
6.4|6.4|1 |
0.577 |
2.065 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
10 |
1 |
no |
yes:out |
PF20163 |
H6BWM8 |
84-235 |
nD1 |
81-220,386-435 |
190 |
e6egcA1 |
6EGC |
192.29.1 |
0.899 |
0.0 |
0.0 |
10.2|10.2|1 |
0.892 |
2.5 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
4 |
no |
yes:4 |
PF20169 |
A0A328B7I8 |
932-1130 |
nD6 |
926-990,1066-1135 |
135 |
e6xssD1 |
6XSS |
109.3.1 |
0.885 |
0.0 |
0.0 |
9.0|9.0|1 |
0.622 |
0.678 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
0 |
no |
no |
PF20169 |
A0A2W5NWV7 |
932-1128 |
nD6 |
926-990,1056-1135 |
145 |
e6xssD1 |
6XSS |
109.3.1 |
0.901 |
0.0 |
0.0 |
9.0|9.0|1 |
0.622 |
0.729 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
0 |
no |
no |
PF20171 |
A0A418Q854 |
165-306 |
nD1 |
6-315 |
310 |
e5u5nA1 |
5U5N |
2003.1.1 |
0.882 |
0.0 |
0.0 |
5.7|8.1|1 |
0.848 |
1.582 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
10 |
14 |
no |
no |
PF20171 |
K0F317 |
167-293 |
nD1 |
31-300 |
270 |
e4ywjA1 |
4YWJ |
2003.1.1 |
0.9 |
0.0 |
0.0 |
5.6|7.0|1 |
0.854 |
1.378 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
NAD(P)-binding Rossmann-fold domains |
9 |
14 |
no |
no |
PF20172 |
A0A0P7KMQ8 |
9-67 |
nD1 |
6-70 |
65 |
e2wcc31 |
2WCC |
252.2.1 |
0.929 |
0.561 |
0.757 |
4.3|4.8|1 |
0.855 |
0.942 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
GCC-box binding domain-like |
GCC-box binding domain-like |
2 |
3 |
no |
no |
PF20172 |
A0A0P8B4X8 |
9-67 |
nD1 |
1-70 |
70 |
e3jtzA1 |
3JTZ |
252.2.1 |
0.942 |
0.0 |
0.0 |
4.4|4.9|0 |
0.796 |
1.014 |
pymol |
more |
good_domain |
a+b two layers |
DNA-binding domain |
GCC-box binding domain-like |
GCC-box binding domain-like |
1 |
3 |
no |
no |
PF20174 |
A0A2B7ZFJ2 |
5-124 |
nD1 |
1-124 |
124 |
e2wp7A1 |
2WP7 |
219.1.1 |
0.945 |
0.795 |
0.634 |
6.5|6.5|1 |
0.744 |
0.554 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
2 |
5 |
no |
no |
PF20174 |
A0A2V1BKW5 |
5-123 |
nD1 |
1-123 |
123 |
e4dpzX1 |
4DPZ |
219.1.1 |
0.933 |
0.0 |
0.282 |
4.5|6.5|1 |
0.785 |
0.549 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
2 |
5 |
no |
no |
PF20179 |
A0A0B1PDI5 |
102-332 |
nD2 |
36-138,161-350 |
293 |
e3pvcA7 |
3PVC |
2003.1.5 |
0.948 |
0.0 |
0.0 |
8.2|9.0|1 |
0.86 |
1.274 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
8 |
11 |
no |
no |
PF20185 |
R6C2L9 |
7-167 |
nD1 |
6-105 |
100 |
e6tugA1 |
6TUG |
601.7.1 |
0.921 |
0.796 |
0.845 |
5.9|6.9|0 |
0.656 |
0.709 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
5 |
0 |
no |
yes:out |
PF20186 |
I9QBW5 |
20-178 |
nD1 |
26-90,131-178 |
113 |
e6c72A3 |
6C72 |
11.1.1 |
0.869 |
0.0 |
0.0 |
2.7|3.1|1 |
0.516 |
1.046 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
2 |
8 |
yes:out |
no |
PF20188 |
A0A2W2NLQ3 |
16-244 |
nD2 |
96-250 |
155 |
e3bhgA2 |
3BHG |
4952.1.1 |
0.898 |
0.0 |
0.0 |
4.5|5.0|0 |
0.781 |
1.22 |
pymol |
more |
good_domain |
alpha arrays |
L-aspartase N-terminal domain-like |
L-aspartase N-terminal domain-like |
L-aspartase N-terminal domain-like |
6 |
2 |
no |
no |
PF20189 |
A0A4U7N735 |
6-83 |
nD1 |
6-80 |
75 |
e2w2uA2 |
2W2U |
604.12.1 |
0.937 |
0.0 |
0.0 |
8.3|8.4|1 |
0.913 |
0.867 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF20189 |
A0A345R6X3 |
6-85 |
nD1 |
16-80 |
65 |
e2w2uA2 |
2W2U |
604.12.1 |
0.931 |
0.0 |
0.0 |
9.1|9.1|1 |
0.879 |
0.751 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:3 |
PF20189 |
A0A238XAF4 |
12-87 |
nD1 |
21-85 |
65 |
e2w2uA2 |
2W2U |
604.12.1 |
0.932 |
0.0 |
0.0 |
8.9|8.9|1 |
0.893 |
0.751 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
0 |
no |
yes:2 |
PF20190 |
R5DAP9 |
4-200 |
nD1 |
6-200 |
195 |
e4a0kA3 |
4A0K |
109.4.1 |
0.92 |
0.0 |
0.252 |
4.9|4.9|1 |
0.52 |
0.682 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF20191 |
A0A0A2AB20 |
32-136 |
nD1 |
31-100 |
70 |
e3e3vA3 |
3E3V |
101.35.1 |
0.932 |
0.0 |
0.0 |
3.7|3.7|1 |
0.792 |
1.458 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
DNA repair regulatory protein RecX |
DNA repair regulatory protein RecX |
3 |
0 |
yes:out |
no |
PF20192 |
A0A7X1KS82 |
6-74 |
nD1 |
6-75 |
70 |
e4v8pAX2 |
4V8P |
3115.1.1 |
0.865 |
0.0 |
0.871 |
3.5|4.5|1 |
0.74 |
0.897 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
2 |
3 |
no |
no |
PF20192 |
A0A0M9GG12 |
1-74 |
nD1 |
6-39,61-74 |
48 |
e4v9f61 |
4V9F |
3115.1.1 |
0.867 |
0.524 |
0.629 |
3.3|4.4|1 |
0.764 |
0.615 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
RplX-like |
RplX-like |
2 |
3 |
no |
no |
PF20197 |
A0A373NA25 |
13-186 |
nD2 |
61-110 |
50 |
e5iujE2 |
5IUJ |
605.1.1 |
0.934 |
0.0 |
0.0 |
5.7|5.7|1 |
0.677 |
0.685 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
Homodimeric domain of signal transducing histidine kinase |
Homodimeric domain of signal transducing histidine kinase |
2 |
2 |
no |
yes:2 |
PF20199 |
A0A2T0LNQ8 |
28-470 |
nD2 |
81-150,181-430 |
320 |
e4er8A1 |
4ER8 |
304.55.2 |
0.909 |
0.0 |
0.0 |
5.3|5.5|0 |
0.88 |
2.362 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Transposase IS200-like |
7 |
5 |
no |
no |
PF20199 |
A0A5Q0LHQ2 |
20-431 |
nD2 |
86-125,163-315,351-395 |
238 |
e4pp4A1 |
4PP4 |
304.55.1 |
0.921 |
0.0 |
0.095 |
5.4|6.0|0 |
0.773 |
1.492 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Origin of replication-binding domains |
Origin of replication-binding domains |
7 |
7 |
no |
no |
PF20211 |
A0A3S4SJA1 |
1-737 |
nD2 |
106-320 |
215 |
e4hm9A1 |
4HM9 |
109.4.1 |
0.94 |
0.0 |
0.0 |
6.4|6.4|1 |
0.352 |
0.752 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF20211 |
A0A448HI42 |
3-691 |
nD2 |
81-285,316-490,511-545 |
415 |
e5xahC1 |
5XAH |
109.4.1 |
0.949 |
0.0 |
0.204 |
5.3|7.1|1 |
0.586 |
1.451 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
20 |
4 |
no |
no |
PF20212 |
A0A0A0DEN2 |
91-189 |
nD2 |
86-190 |
105 |
e4zquA1 |
4ZQU |
2008.1.1 |
0.902 |
0.0 |
0.0 |
7.7|7.7|1 |
0.722 |
0.515 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
2 |
4 |
no |
no |
PF20212 |
A0A5B0DFG5 |
91-189 |
nD2 |
86-190 |
105 |
e4zquA1 |
4ZQU |
2008.1.1 |
0.902 |
0.0 |
0.0 |
7.8|7.8|1 |
0.722 |
0.515 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
2 |
4 |
no |
no |
PF20215 |
A0A0F4R1G3 |
2-218 |
nD2 |
126-275 |
150 |
e6c10A2 |
6C10 |
11.1.1 |
0.902 |
0.0 |
0.0 |
5.0|5.1|0 |
0.72 |
1.389 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
5 |
5 |
no |
no |
PF20217 |
A0A4Q0M474 |
39-242 |
nD2 |
71-240 |
170 |
e1zelB2 |
1ZEL |
316.2.1 |
0.89 |
0.997 |
0.99 |
6.9|8.8|0 |
0.622 |
0.802 |
pymol |
more |
good_domain |
a+b three layers |
Nucleotidyltransferase-like |
Rv2827c C-terminal domain-like |
Rv2827c C-terminal domain-like |
7 |
6 |
no |
no |
PF20217 |
A0A1F9PKT1 |
44-227 |
nD2 |
71-235 |
165 |
e1zelB2 |
1ZEL |
316.2.1 |
0.938 |
0.997 |
0.988 |
4.4|4.5|0 |
0.569 |
0.778 |
pymol |
more |
good_domain |
a+b three layers |
Nucleotidyltransferase-like |
Rv2827c C-terminal domain-like |
Rv2827c C-terminal domain-like |
7 |
5 |
no |
no |
PF20219 |
M2TF59 |
25-210 |
nD2 |
51-185 |
135 |
e5zt9A1 |
5ZT9 |
2007.1.14 |
0.851 |
0.0 |
0.0 |
5.6|5.6|1 |
0.765 |
0.938 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Class I glutamine amidotransferase-like |
Chelatase-like |
4 |
7 |
no |
yes:out |
PF20224 |
R6BH33 |
1-446 |
nD2 |
46-150,336-415,431-440 |
195 |
e2yzyA1 |
2YZY |
71.1.1 |
0.947 |
0.0 |
0.0 |
11.4|11.4|1 |
0.904 |
1.026 |
pymol |
na |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
4 |
12 |
yes:out |
no |
PF20224 |
A0A4Q1B1H8 |
2-489 |
nD1 |
31-250,276-450 |
395 |
e6e4vA1 |
6E4V |
5084.5.3 |
0.875 |
0.0 |
0.0 |
9.8|9.8|1 |
0.562 |
0.698 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
7 |
19 |
yes:out |
no |
PF20226 |
A0A3M1YVH9 |
10-242 |
nD1 |
16-75 |
60 |
e4cbkL1 |
4CBK |
5041.1.1 |
0.882 |
0.0 |
0.0 |
7.0|7.0|0 |
0.861 |
0.769 |
pymol |
more |
good_domain |
extended segments |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
F1F0 ATP synthase subunit C |
2 |
1 |
no |
yes:2 |
PF20226 |
A0A3M1YVH9 |
10-242 |
nD3 |
166-240 |
75 |
e6qlzA1 |
6QLZ |
220.1.1 |
0.947 |
0.669 |
0.763 |
6.4|7.0|1 |
0.757 |
0.615 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
3 |
6 |
no |
yes:out |
PF20226 |
A0A3M1XXB4 |
11-239 |
nD3 |
166-230 |
65 |
e3fssA2 |
3FSS |
220.1.1 |
0.885 |
0.0 |
0.658 |
7.2|7.2|1 |
0.695 |
0.533 |
pymol |
more |
good_domain |
beta barrels |
PH domain-like |
PH domain-like |
PH domain-like |
2 |
6 |
no |
yes:out |
PF20227 |
A0A1I3BSY3 |
1-153 |
nD1 |
1-150 |
150 |
e1ufbA1 |
1UFB |
601.7.1 |
0.93 |
0.0 |
0.0 |
8.9|8.9|1 |
0.924 |
1.064 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
HEPN |
Nucleotidyltransferase substrate binding subunit/domain |
6 |
0 |
no |
no |
PF20229 |
A0A7K0DTX7 |
18-176 |
nD1 |
1-70 |
70 |
e5h1oA1 |
5H1O |
304.56.1 |
0.916 |
0.983 |
0.987 |
7.8|7.8|1 |
0.832 |
0.753 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR associated protein Cas2-like |
CRISPR associated protein Cas2-like |
2 |
4 |
no |
no |
PF20229 |
A0A7K0DTX7 |
18-176 |
nD2 |
76-175 |
100 |
e7ankB2 |
7ANK |
604.1.1 |
0.871 |
0.0 |
0.0 |
11.3|11.6|1 |
0.855 |
0.909 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
no |
PF20229 |
A0A1X0B1B5 |
18-176 |
nD2 |
76-170 |
95 |
e4hwdD1 |
4HWD |
604.3.1 |
0.902 |
0.0 |
0.0 |
7.3|8.9|0 |
0.947 |
1.08 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
yes:out |
no |
PF20229 |
A0A7K0DEZ5 |
18-176 |
nD1 |
1-70 |
70 |
e1zpwX1 |
1ZPW |
304.56.1 |
0.935 |
0.982 |
0.987 |
7.7|7.8|1 |
0.854 |
0.753 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR associated protein Cas2-like |
CRISPR associated protein Cas2-like |
2 |
4 |
yes:in |
no |
PF20229 |
A0A7K0DEZ5 |
18-176 |
nD2 |
76-170 |
95 |
e7ankB2 |
7ANK |
604.1.1 |
0.874 |
0.0 |
0.0 |
11.4|11.6|1 |
0.826 |
0.864 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
yes:out |
no |
PF20234 |
A0A1Y4I0L8 |
182-404 |
nD4 |
321-405 |
85 |
e5e7xA2 |
5E7X |
650.1.1 |
0.885 |
0.0 |
0.0 |
6.7|6.7|1 |
0.945 |
1.069 |
pymol |
more |
good_domain |
alpha bundles |
Chaperone J-domain |
Chaperone J-domain |
Chaperone J-domain |
3 |
0 |
no |
yes:out |
PF20234 |
R6DS66 |
170-388 |
nD4 |
301-389 |
89 |
e3l1nA1 |
3L1N |
650.1.1 |
0.932 |
0.0 |
0.0 |
6.0|6.7|0 |
0.959 |
1.119 |
pymol |
more |
good_domain |
alpha bundles |
Chaperone J-domain |
Chaperone J-domain |
Chaperone J-domain |
3 |
1 |
no |
yes:out |
PF20234 |
A0A4R2L5V4 |
156-375 |
nD4 |
291-375 |
85 |
e5j5lA2 |
5J5L |
650.1.1 |
0.898 |
0.0 |
0.0 |
6.5|6.7|1 |
0.943 |
1.069 |
pymol |
more |
good_domain |
alpha bundles |
Chaperone J-domain |
Chaperone J-domain |
Chaperone J-domain |
3 |
1 |
no |
yes:out |
PF20236 |
A0A0C3L571 |
15-167 |
nD1 |
6-165 |
160 |
e2q4mA1 |
2Q4M |
844.1.1 |
0.891 |
0.878 |
0.546 |
8.1|8.1|1 |
0.802 |
0.705 |
pymol |
more |
good_domain |
beta barrels |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
3 |
12 |
no |
no |
PF20236 |
S8EEY4 |
14-169 |
nD1 |
6-170 |
165 |
e2q4mA1 |
2Q4M |
844.1.1 |
0.854 |
0.929 |
0.773 |
11.9|11.9|1 |
0.812 |
0.727 |
pymol |
more |
good_domain |
beta barrels |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
Transcriptional factor tubby, C-terminal domain |
2 |
12 |
no |
no |
PF20237 |
A0A1L9PZ50 |
16-284 |
nD1 |
16-160 |
145 |
e1k4tA5 |
1K4T |
192.8.1 |
0.882 |
0.0 |
0.0 |
7.4|8.1|0 |
0.856 |
1.973 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
6 |
2 |
no |
yes:out |
PF20240 |
K9XG19 |
4-106 |
nD1 |
1-145 |
145 |
e5nlaA2 |
5NLA |
10.12.1 |
0.946 |
0.998 |
0.0 |
5.7|5.7|1 |
0.705 |
0.824 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Double-stranded beta-helix |
Double-stranded beta-helix |
3 |
8 |
no |
no |
PF20241 |
A0A0K9R4V1 |
1-253 |
nD1 |
1-130 |
130 |
e5iz5A2 |
5IZ5 |
11.2.1 |
0.928 |
0.0 |
0.601 |
6.9|7.7|1 |
0.882 |
0.922 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
1 |
9 |
no |
no |
PF20241 |
A0A0K9R4V1 |
1-253 |
nD2 |
131-264 |
134 |
e3nsjA3 |
3NSJ |
11.2.1 |
0.937 |
0.0 |
0.265 |
8.0|8.8|1 |
0.895 |
0.95 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
C2 domain |
C2 domain |
1 |
9 |
no |
no |
PF20244 |
A0A6L5K093 |
6-200 |
nD1 |
1-130 |
130 |
e3v7bA1 |
3V7B |
881.1.1 |
0.855 |
0.825 |
0.802 |
7.1|9.9|1 |
0.667 |
0.79 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
Mog1p/PsbP-like |
2 |
7 |
no |
no |
PF20244 |
A0A1F5C6U6 |
17-211 |
nD2 |
146-274 |
129 |
e1vr8A1 |
1VR8 |
881.2.1 |
0.903 |
0.93 |
0.935 |
9.4|9.8|0 |
0.79 |
0.992 |
pymol |
more |
good_domain |
a+b three layers |
Mog1p/PsbP-like |
TM1622-like |
TM1622-like |
5 |
5 |
no |
no |
PF20250 |
A6FEA4 |
84-263 |
nD3 |
156-170,196-270 |
90 |
e4wt8Ca1 |
4WT8 |
325.1.8 |
0.942 |
0.83 |
0.713 |
6.6|7.1|1 |
0.867 |
1.192 |
pymol |
more |
good_domain |
a+b complex topology |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
alpha/beta-Hammerhead/Barrel-sandwich hybrid |
Ribosomal L27 protein |
0 |
7 |
no |
no |
PF20252 |
A0A7J7Y864 |
81-286 |
nD1 |
1-15,71-295 |
240 |
e5xahC1 |
5XAH |
109.4.1 |
0.943 |
0.357 |
0.597 |
6.7|11.7|0 |
0.435 |
0.839 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF20252 |
L8GFW7 |
45-228 |
nD1 |
41-235 |
195 |
e4recA5 |
4REC |
109.4.1 |
0.94 |
0.0 |
0.605 |
8.2|9.8|0 |
0.854 |
0.682 |
pymol |
na |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
7 |
0 |
no |
no |
PF20267 |
Q9C091 |
1761-1923 |
nD6 |
1381-1405,1766-1923 |
183 |
e2zfuA1 |
2ZFU |
2003.1.5 |
0.94 |
0.0 |
0.0 |
5.6|7.4|1 |
0.809 |
0.796 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
4 |
6 |
no |
no |
PF20267 |
A0A455AU04 |
970-1132 |
nD4 |
591-605,976-1130 |
170 |
e2zfuA1 |
2ZFU |
2003.1.5 |
0.895 |
0.0 |
0.0 |
6.0|7.6|1 |
0.794 |
0.739 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
3 |
6 |
yes:out |
yes:1 |
PF20267 |
Q4ZG55 |
1786-1949 |
nD7 |
1411-1425,1791-1949 |
174 |
e2zfuA1 |
2ZFU |
2003.1.5 |
0.938 |
0.0 |
0.0 |
6.4|7.9|1 |
0.798 |
0.757 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Rossmann-like |
Rossmann-related |
S-adenosyl-L-methionine-dependent methyltransferases |
3 |
6 |
no |
yes:1 |
PF20270 |
A0A3N2PBA6 |
208-341 |
nD2 |
206-350 |
145 |
e3uumB2 |
3UUM |
604.1.1 |
0.934 |
0.0 |
0.0 |
11.7|12.5|0 |
0.9 |
1.318 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
3 |
0 |
no |
yes:out |
PF20270 |
A0A1S1QF37 |
320-458 |
nD3 |
326-465 |
140 |
e5j1gB1 |
5J1G |
604.1.1 |
0.852 |
0.0 |
0.0 |
8.7|9.1|1 |
0.724 |
1.273 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
no |
PF20271 |
A0A0C2ATG2 |
8-93 |
nD1 |
1-90 |
90 |
e6ch2E1 |
6CH2 |
3718.1.1 |
0.906 |
0.261 |
0.296 |
6.6|6.6|1 |
0.643 |
0.984 |
pymol |
more |
good_domain |
alpha bundles |
Flagellar protein fliT |
Flagellar protein fliT |
Flagellar protein fliT |
4 |
1 |
no |
no |
PF20273 |
A0A1Z1F852 |
164-280 |
nD2 |
141-280 |
140 |
e5ldaA1 |
5LDA |
2492.1.1 |
0.924 |
0.0 |
0.0 |
6.9|7.5|1 |
0.807 |
0.864 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
4 |
6 |
no |
no |
PF20273 |
A0A0J5X210 |
168-286 |
nD2 |
136-290 |
155 |
e5ldaA1 |
5LDA |
2492.1.1 |
0.921 |
0.0 |
0.0 |
6.5|6.9|1 |
0.763 |
0.957 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
8 |
no |
no |
PF20273 |
A0A228IN95 |
169-287 |
nD2 |
146-290 |
145 |
e5ldaA1 |
5LDA |
2492.1.1 |
0.907 |
0.0 |
0.0 |
6.5|7.3|1 |
0.762 |
0.895 |
pymol |
more |
good_domain |
a+b three layers |
Cytidine deaminase-like |
Cytidine deaminase-like |
Cytidine deaminase-like |
3 |
8 |
no |
no |
PF20278 |
A0A1G7EN77 |
280-601 |
nD3 |
381-508,531-550,576-600 |
173 |
e4xqkA1 |
4XQK |
2008.1.1 |
0.853 |
0.0 |
0.0 |
2.4|3.1|0 |
0.598 |
0.848 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
6 |
3 |
no |
no |
PF20278 |
A0A418WGN0 |
477-771 |
nD4 |
561-720,746-785 |
200 |
e2e52A1 |
2E52 |
2008.1.1 |
0.918 |
0.0 |
0.0 |
4.1|4.5|0 |
0.68 |
0.98 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
5 |
no |
no |
PF20281 |
A0A5J5G8J2 |
289-484 |
nD2 |
271-435,461-495 |
200 |
e1y0kA1 |
1Y0K |
2008.1.1 |
0.949 |
0.0 |
0.0 |
3.2|4.0|1 |
0.756 |
0.98 |
pymol |
na |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
6 |
no |
no |
PF20282 |
A0A385L5Z3 |
2-121 |
nD1 |
13-120 |
108 |
e5dfnB2 |
5DFN |
101.1.2 |
0.862 |
0.0 |
0.0 |
3.3|3.7|0 |
0.885 |
1.137 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
5 |
0 |
no |
no |
PF20284 |
A0A161WHY6 |
5-121 |
nD1 |
1-120 |
120 |
e3gi7A1 |
3GI7 |
3831.1.1 |
0.88 |
0.0 |
0.0 |
4.0|4.0|1 |
0.797 |
1.165 |
pymol |
more |
good_domain |
alpha bundles |
Secreted protein of unknown function DUF1311 |
Secreted protein of unknown function DUF1311 |
Secreted protein of unknown function DUF1311 |
5 |
0 |
no |
no |
PF20285 |
A0A2E2DFN0 |
37-149 |
nD1 |
1-150 |
150 |
e2dofA1 |
2DOF |
101.1.17 |
0.909 |
0.0 |
0.0 |
3.0|3.2|0 |
0.887 |
2.083 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
FF domain |
7 |
0 |
no |
no |
PF20289 |
A0A0F2HZG9 |
37-126 |
nD1 |
1-165 |
165 |
e3c0uB1 |
3C0U |
2008.1.1 |
0.876 |
0.0 |
0.0 |
4.9|5.2|0 |
0.799 |
0.809 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
5 |
no |
no |
PF20301 |
A0A2G1YM09 |
1-157 |
nD1 |
21-160 |
140 |
e3njhA1 |
3NJH |
3156.1.1 |
0.927 |
0.876 |
0.65 |
9.9|9.9|1 |
0.934 |
0.952 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
0 |
11 |
no |
no |
PF20301 |
J2WJQ6 |
1-156 |
nD1 |
21-159 |
139 |
e3njhA1 |
3NJH |
3156.1.1 |
0.923 |
0.874 |
0.641 |
9.0|9.1|1 |
0.917 |
0.946 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
0 |
10 |
no |
no |
PF20301 |
A0A0Q8QHF8 |
4-159 |
nD1 |
21-160 |
140 |
e3njhA1 |
3NJH |
3156.1.1 |
0.929 |
0.902 |
0.578 |
9.0|9.0|1 |
0.917 |
0.952 |
pymol |
more |
good_domain |
beta sandwiches |
Cupredoxin-like |
Cupredoxin-related |
Cupredoxin-related |
0 |
11 |
no |
no |
PF20309 |
B7P5I4 |
13-48 |
nD1 |
6-145 |
140 |
e4c6tC1 |
4C6T |
2007.9.1 |
0.87 |
0.0 |
0.0 |
10.7|10.7|1 |
0.823 |
0.881 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Flavodoxin-like |
Toll/Interleukin receptor TIR domain |
Toll/Interleukin receptor TIR domain |
5 |
5 |
no |
no |
PF20311 |
A0A223P0L0 |
8-305 |
nD1 |
21-305 |
285 |
e4tq2A1 |
4TQ2 |
9.1.1 |
0.93 |
0.0 |
0.0 |
11.4|11.4|1 |
0.952 |
1.863 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
4 |
15 |
yes:out |
no |
PF20311 |
A0A1T4K5G2 |
7-281 |
nD1 |
21-295 |
275 |
e4tq2A1 |
4TQ2 |
9.1.1 |
0.93 |
0.0 |
0.0 |
10.2|10.2|1 |
0.96 |
1.797 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
4 |
15 |
yes:out |
no |
PF20311 |
A0A3B8TY48 |
1-258 |
nD1 |
1-268 |
268 |
e3emmA1 |
3EMM |
9.1.1 |
0.896 |
0.0 |
0.0 |
8.6|9.2|1 |
0.925 |
1.752 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
15 |
no |
no |
PF20315 |
A0A4R2QUQ7 |
3-171 |
nD1 |
6-15,41-105 |
75 |
e4l8jA1 |
4L8J |
5086.1.1 |
0.865 |
0.0 |
0.0 |
5.9|6.1|0 |
0.962 |
0.888 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
0 |
no |
yes:2 |
PF20315 |
A0A4Q2MCV8 |
9-174 |
nD1 |
11-20,46-115 |
80 |
e4fi5A1 |
4FI5 |
192.8.1 |
0.875 |
0.0 |
0.0 |
5.0|5.2|0 |
0.988 |
1.088 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
Eukaryotic DNA topoisomerase I, dispensable insert domain |
3 |
0 |
no |
yes:2 |
PF20320 |
A0A345WP86 |
14-318 |
nD1 |
16-220 |
205 |
e1gefA1 |
1GEF |
2008.1.1 |
0.949 |
0.0 |
0.163 |
8.0|8.7|1 |
0.971 |
1.005 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
6 |
7 |
no |
no |
PF20322 |
A0A327R4X4 |
1-315 |
nD1 |
6-175 |
170 |
e3uo3A3 |
3UO3 |
622.1.1 |
0.907 |
0.0 |
0.0 |
6.1|6.1|1 |
0.91 |
1.932 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
6 |
2 |
no |
no |
PF20322 |
A0A1H1VXR5 |
1-315 |
nD1 |
6-175 |
170 |
e3uo3A3 |
3UO3 |
622.1.1 |
0.898 |
0.0 |
0.0 |
6.1|6.1|1 |
0.91 |
1.932 |
pymol |
more |
good_domain |
alpha bundles |
YvfG-like |
HSC20 (HSCB), C-terminal oligomerisation domain |
HSC20 (HSCB), C-terminal oligomerisation domain |
6 |
2 |
no |
no |
PF20332 |
A0A7H4GMP9 |
5-123 |
nD1 |
31-90 |
60 |
e1gjtA1 |
1GJT |
632.2.1 |
0.925 |
0.0 |
0.299 |
4.1|5.9|0 |
0.874 |
0.992 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Bacterial immunoglobulin/albumin-binding domains |
Bacterial immunoglobulin/albumin-binding domains |
4 |
0 |
yes:out |
yes:out |
PF20332 |
A0A2U8FV56 |
5-133 |
nD1 |
36-95 |
60 |
e2mh3B1 |
2MH3 |
105.1.1 |
0.943 |
0.0 |
0.0 |
4.9|6.0|0 |
0.7 |
0.896 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
3 |
0 |
yes:out |
yes:out |
PF20334 |
A0A0J9HNM3 |
1-206 |
nD1 |
1-210 |
210 |
e7akwA1 |
7AKW |
5001.1.1 |
0.907 |
0.0 |
0.0 |
9.8|11.5|1 |
0.857 |
0.736 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
7 |
2 |
no |
yes:7 |
PF20334 |
A0A1Q4RPE6 |
1-223 |
nD1 |
6-215 |
210 |
e5jsiA1 |
5JSI |
5001.1.1 |
0.869 |
0.0 |
0.0 |
11.7|11.7|1 |
0.834 |
0.736 |
pymol |
more |
good_domain |
alpha bundles |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
Family A G protein-coupled receptor-like |
6 |
2 |
no |
yes:7 |
PF20339 |
A0A1I3DZJ9 |
1-157 |
nD1 |
6-100,128-145 |
113 |
e5ydrB1 |
5YDR |
3497.1.1 |
0.874 |
0.638 |
0.623 |
3.0|3.0|1 |
0.447 |
0.743 |
pymol |
more |
good_domain |
beta barrels |
Replication foci-targeting sequence N-terminal domain |
Replication foci-targeting sequence N-terminal domain |
Replication foci-targeting sequence N-terminal domain |
3 |
7 |
no |
no |
PF20355 |
A0A0M2DUP2 |
8-145 |
nD1 |
1-150 |
150 |
e6egcA1 |
6EGC |
192.29.1 |
0.912 |
0.0 |
0.0 |
9.0|9.0|1 |
0.8 |
1.974 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
no |
PF20357 |
R6DKR2 |
1-181 |
nD1 |
1-180 |
180 |
e1fioA1 |
1FIO |
603.1.1 |
0.948 |
0.0 |
0.0 |
11.1|11.1|1 |
0.838 |
1.714 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
7 |
0 |
no |
yes:5 |
PF20357 |
R6EGE8 |
1-183 |
nD1 |
1-165 |
165 |
e1fioA1 |
1FIO |
603.1.1 |
0.922 |
0.0 |
0.0 |
10.6|10.6|1 |
0.836 |
1.571 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
4 |
2 |
no |
yes:5 |
PF20357 |
A0A1V4SRW2 |
1-185 |
nD1 |
1-180 |
180 |
e2xheB4 |
2XHE |
603.1.1 |
0.911 |
0.0 |
0.0 |
7.4|7.4|1 |
0.761 |
1.714 |
pymol |
more |
good_domain |
alpha bundles |
STAT-like |
t-snare proteins |
t-snare proteins |
5 |
0 |
no |
yes:5 |
PF20358 |
A0A062V136 |
2-170 |
nD1 |
16-165 |
150 |
e5doqB2 |
5DOQ |
5069.1.1 |
0.88 |
0.0 |
0.0 |
5.8|5.8|1 |
0.776 |
0.708 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
0 |
no |
yes:4 |
PF20362 |
A0A5N8YHI4 |
50-194 |
nD1 |
26-125,181-195 |
115 |
e6egcA1 |
6EGC |
192.29.1 |
0.915 |
0.0 |
0.305 |
7.3|7.3|1 |
0.583 |
1.513 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
6 |
0 |
no |
no |
PF20366 |
A0A1I3API6 |
25-195 |
nD1 |
1-195 |
195 |
e7bdvA1 |
7BDV |
2008.1.1 |
0.949 |
0.681 |
0.881 |
5.2|6.3|1 |
0.831 |
0.956 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
9 |
no |
no |
PF20366 |
A0A1E3AC65 |
25-195 |
nD1 |
1-195 |
195 |
e7bdvA1 |
7BDV |
2008.1.1 |
0.949 |
0.672 |
0.879 |
5.2|6.4|1 |
0.844 |
0.956 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
5 |
9 |
no |
no |
PF20368 |
A0A1H6C4N3 |
1-226 |
nD1 |
1-225 |
225 |
e4wj3P1 |
4WJ3 |
2.1.1 |
0.893 |
0.0 |
0.253 |
6.9|7.5|1 |
0.873 |
2.163 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
5 |
10 |
no |
no |
PF20370 |
A0A0Q7I827 |
1-107 |
nD1 |
16-100 |
85 |
e6w6pt1 |
6W6P |
604.9.1 |
0.89 |
0.0 |
0.0 |
6.5|6.5|1 |
0.919 |
0.988 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Ribosomal protein S20 |
Ribosomal protein S20 |
3 |
0 |
no |
no |
PF20373 |
A0A0L0BK80 |
62-189 |
nD1 |
61-200 |
140 |
e3cwqA1 |
3CWQ |
2004.1.1 |
0.949 |
0.522 |
0.797 |
7.9|8.4|1 |
0.69 |
0.628 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
3 |
5 |
no |
no |
PF20375 |
F0KII6 |
1-294 |
nD1 |
1-140 |
140 |
e7a0tB1 |
7A0T |
4252.1.1 |
0.942 |
0.999 |
0.99 |
8.8|10.6|1 |
0.695 |
0.791 |
pymol |
more |
good_domain |
beta barrels |
AttH-like |
AttH-like |
AttH-like |
1 |
10 |
no |
no |
PF20376 |
A0A1W2H4U4 |
62-278 |
nD3 |
211-260 |
50 |
e2fiyA1 |
2FIY |
375.1.1 |
0.903 |
0.953 |
0.886 |
0.0|0.0|0 |
0.912 |
0.893 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF20376 |
A0A0A8UXM3 |
63-278 |
nD3 |
211-260 |
50 |
e2fiyA1 |
2FIY |
375.1.1 |
0.903 |
0.953 |
0.892 |
0.0|0.0|0 |
0.912 |
0.893 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF20379 |
A0A4Y7R9L6 |
13-253 |
nD1 |
11-225 |
215 |
e6wvdA2 |
6WVD |
174.1.1 |
0.859 |
0.0 |
0.0 |
11.9|12.2|0 |
0.926 |
1.473 |
pymol |
more |
good_domain |
few secondary structure elements |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
Tetraspanin transmembrane domain |
5 |
0 |
no |
no |
PF20380 |
A0A370AQ87 |
1-249 |
nD1 |
36-250 |
215 |
e4r7kD1 |
4R7K |
331.3.1 |
0.93 |
0.0 |
0.0 |
10.8|11.6|1 |
0.949 |
1.344 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Bet v1-like |
Bet v1-like |
3 |
11 |
yes:out |
no |
PF20380 |
S3JXL3 |
3-247 |
nD1 |
31-245 |
215 |
e6i3vF1 |
6I3V |
331.3.1 |
0.927 |
0.0 |
0.174 |
7.4|11.3|1 |
0.922 |
1.344 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Bet v1-like |
Bet v1-like |
4 |
11 |
yes:out |
no |
PF20383 |
A0A5C6BIQ1 |
21-136 |
nD1 |
21-134 |
114 |
e1u02A2 |
1U02 |
3012.1.1 |
0.948 |
0.0 |
0.209 |
3.7|4.8|1 |
0.952 |
1.14 |
pymol |
more |
good_domain |
a+b two layers |
Cof C2 cap domain |
Cof C2 cap domain |
Cof C2 cap domain |
4 |
5 |
no |
no |
PF20386 |
A0A1G6ILQ9 |
1-265 |
nD1 |
21-90 |
70 |
e5da5J1 |
5DA5 |
150.1.1 |
0.86 |
0.0 |
0.0 |
7.6|7.6|1 |
0.733 |
0.432 |
pymol |
more |
good_domain |
alpha bundles |
Ferritin/Heme oxygenase/4-helical cytokines |
Ferritin/Heme oxygenase |
Ferritin |
3 |
0 |
no |
yes:2 |
PF20390 |
A0A2S2F8W3 |
120-315 |
nD2 |
11-20,231-300 |
80 |
e2p2rA1 |
2P2R |
327.11.2 |
0.856 |
0.0 |
0.0 |
3.0|3.2|1 |
0.818 |
0.941 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Eukaryotic type KH-domain (KH-domain type I) |
4 |
3 |
no |
no |
PF20390 |
A0A809S3Z8 |
78-284 |
nD1 |
76-190 |
115 |
e2hwjA2 |
2HWJ |
876.1.1 |
0.857 |
0.0 |
0.0 |
4.0|4.0|1 |
0.886 |
1.264 |
pymol |
more |
good_domain |
a+b complex topology |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
ParB/Sulfiredoxin |
5 |
4 |
no |
no |
PF20391 |
A0A1H1WQ10 |
1-120 |
nD1 |
6-95 |
90 |
e3rklC1 |
3RKL |
5055.1.1 |
0.921 |
0.0 |
0.0 |
4.7|5.3|0 |
0.807 |
1.125 |
pymol |
more |
good_domain |
extended segments |
Small-conductance potassium channel |
Small-conductance potassium channel |
Small-conductance potassium channel |
3 |
6 |
no |
no |
PF20391 |
A0A5C7AWB7 |
1-117 |
nD1 |
6-95 |
90 |
e3k44C1 |
3K44 |
295.1.1 |
0.907 |
0.0 |
0.615 |
5.3|5.3|1 |
0.603 |
0.738 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
6 |
no |
no |
PF20391 |
I3C840 |
1-116 |
nD1 |
6-95 |
90 |
e3k44C1 |
3K44 |
295.1.1 |
0.909 |
0.0 |
0.62 |
5.7|5.7|1 |
0.609 |
0.738 |
pymol |
more |
good_domain |
a+b two layers |
ssDNA-binding transcriptional regulator domain-like |
ssDNA-binding transcriptional regulator domain |
ssDNA-binding transcriptional regulator domain |
3 |
6 |
no |
no |
PF20392 |
A0A1G8YCZ9 |
1-334 |
nD1 |
1-175 |
175 |
e5yh1A1 |
5YH1 |
2006.1.2 |
0.932 |
0.217 |
0.258 |
3.9|3.9|1 |
0.349 |
0.818 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
DHH phosphoesterases |
4 |
3 |
no |
no |
PF20392 |
A0A538JQ37 |
2-327 |
nD1 |
1-170 |
170 |
e5yh1A1 |
5YH1 |
2006.1.2 |
0.926 |
0.226 |
0.301 |
4.0|4.0|1 |
0.332 |
0.794 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
HAD domain-like |
HAD domain-related |
DHH phosphoesterases |
5 |
3 |
no |
no |
PF20395 |
A0A1H6G269 |
382-546 |
nD2 |
376-530,573-610 |
193 |
e3r3pB1 |
3R3P |
2008.1.1 |
0.934 |
0.0 |
0.0 |
2.9|3.5|1 |
0.883 |
0.946 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
5 |
no |
no |
PF20395 |
A0A6G4QV93 |
377-542 |
nD2 |
371-530,571-605 |
195 |
e4g6vG1 |
4G6V |
2008.1.1 |
0.936 |
0.0 |
0.0 |
3.5|3.5|1 |
0.771 |
0.956 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Restriction endonuclease-like |
Restriction endonuclease-like |
Restriction endonuclease-like |
7 |
5 |
no |
no |
PF20396 |
A0A0Q9ESN9 |
6-273 |
nD1 |
26-175 |
150 |
e3ud1B6 |
3UD1 |
12.5.1 |
0.93 |
0.57 |
0.728 |
5.0|5.8|1 |
0.801 |
0.98 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
1 |
11 |
yes:out |
no |
PF20396 |
A0A2U9T278 |
1-264 |
nD1 |
16-170 |
155 |
e3ud1B6 |
3UD1 |
12.5.1 |
0.924 |
0.62 |
0.727 |
4.8|5.6|1 |
0.818 |
1.013 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
1 |
10 |
yes:out |
no |
PF20396 |
A0A091BG60 |
2-259 |
nD1 |
11-165 |
155 |
e3ud1B6 |
3UD1 |
12.5.1 |
0.923 |
0.632 |
0.748 |
4.9|6.0|1 |
0.815 |
1.013 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
ZU5/Nup98-C/GAIN-B autoproteolytic domain-related |
1 |
11 |
no |
no |
PF20396 |
A0A091BG60 |
2-259 |
nD2 |
166-260 |
95 |
e7m5tA1 |
7M5T |
604.1.1 |
0.879 |
0.0 |
0.0 |
6.7|6.7|1 |
0.83 |
0.864 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
1 |
no |
no |
PF20398 |
A0A0Q5HXL4 |
1-142 |
nD1 |
81-140 |
60 |
e7ah91L1 |
7AH9 |
192.18.1 |
0.893 |
0.0 |
0.0 |
4.2|4.2|1 |
0.596 |
0.714 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
MxiH-like |
MxiH-like |
3 |
0 |
yes:out |
yes:2 |
PF20405 |
A0A2T4WKI4 |
2-326 |
nD1 |
6-225 |
220 |
e2if6A1 |
2IF6 |
219.1.1 |
0.887 |
0.256 |
0.409 |
7.6|7.6|1 |
0.83 |
0.982 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
9 |
no |
no |
PF20405 |
A0A4U0EWU3 |
2-326 |
nD1 |
6-74,98-225 |
197 |
e2wp7A1 |
2WP7 |
219.1.1 |
0.902 |
0.58 |
0.423 |
5.0|7.5|1 |
0.779 |
0.879 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
9 |
no |
no |
PF20405 |
A0A7Y2ZRJ6 |
2-326 |
nD1 |
6-74,98-225 |
197 |
e3kw0C1 |
3KW0 |
219.1.1 |
0.888 |
0.387 |
0.541 |
6.7|7.5|1 |
0.779 |
0.879 |
pymol |
more |
good_domain |
a+b complex topology |
Cysteine proteinases-like |
Cysteine proteinases |
Cysteine proteinases |
7 |
11 |
no |
no |
PF20407 |
Q7UGL4 |
126-273 |
nD2 |
71-290 |
220 |
e4qhzD1 |
4QHZ |
10.1.1 |
0.944 |
0.99 |
0.988 |
9.7|14.3|1 |
0.904 |
1.028 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
0 |
14 |
no |
no |
PF20412 |
A0A0S7L8P4 |
134-245 |
nD1 |
16-240 |
225 |
e6uqkB5 |
6UQK |
109.4.1 |
0.935 |
0.0 |
0.166 |
8.2|10.8|0 |
0.861 |
0.787 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
0 |
no |
no |
PF20412 |
A0A2U3YCS7 |
133-247 |
nD1 |
6-245 |
240 |
e5nr4A1 |
5NR4 |
109.4.1 |
0.937 |
0.0 |
0.152 |
8.8|10.4|0 |
0.847 |
0.839 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
0 |
no |
no |
PF20412 |
A0A0B7AY85 |
139-251 |
nD1 |
11-253 |
243 |
e5dn7A1 |
5DN7 |
109.4.1 |
0.942 |
0.0 |
0.211 |
8.7|11.0|0 |
0.838 |
0.85 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
0 |
no |
no |
PF20417 |
A7SXH9 |
94-167 |
nD2 |
101-165 |
65 |
e5v8wG1 |
5V8W |
331.23.1 |
0.859 |
0.0 |
0.0 |
6.2|6.2|1 |
0.766 |
0.707 |
pymol |
more |
good_domain |
a+b two layers |
TBP-like |
Integrator IntS9/IntS11 C-terminal domain |
Integrator IntS9/IntS11 C-terminal domain |
3 |
4 |
no |
no |
PF20437 |
G0A5K2 |
85-118 |
nD1 |
81-310 |
230 |
e7ev6A5 |
7EV6 |
3714.1.1 |
0.897 |
1.0 |
1.0 |
5.5|8.5|1 |
0.938 |
2.911 |
pymol |
more |
good_domain |
a+b two layers |
Lon-like protease MtaLonC helical domain |
Lon-like protease MtaLonC helical domain |
Lon-like protease MtaLonC helical domain |
5 |
5 |
no |
no |
PF20438 |
R6GTB0 |
240-417 |
nD2 |
241-340 |
100 |
e3mc8A1 |
3MC8 |
3121.1.1 |
0.882 |
0.0 |
0.0 |
6.5|6.5|1 |
0.846 |
1.19 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
4 |
5 |
no |
no |
PF20438 |
R5IMU3 |
238-416 |
nD2 |
241-340 |
100 |
e5z2wA1 |
5Z2W |
3121.1.1 |
0.854 |
0.0 |
0.0 |
5.6|5.7|1 |
0.876 |
1.19 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
4 |
4 |
no |
no |
PF20438 |
Q3EL72 |
1-176 |
nD1 |
1-90 |
90 |
e5uayA3 |
5UAY |
3121.1.1 |
0.855 |
0.0 |
0.309 |
5.5|5.8|1 |
0.825 |
1.071 |
pymol |
more |
good_domain |
a+b duplicates or obligate multimers |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
Polypeptide transport-associated (POTRA) domain |
3 |
3 |
no |
no |
PF20448 |
A0A5C6HR56 |
1-172 |
nD1 |
21-170 |
150 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.877 |
0.0 |
0.271 |
7.5|8.0|0 |
0.893 |
0.98 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
2 |
9 |
yes:out |
no |
PF20448 |
Q8A357 |
1-185 |
nD1 |
26-185 |
160 |
e5jk2B1 |
5JK2 |
9.1.1 |
0.94 |
0.0 |
0.415 |
7.0|7.1|1 |
0.922 |
1.046 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
2 |
10 |
yes:out |
no |
PF20453 |
A0A4U0H6I3 |
1-294 |
nD1 |
6-75 |
70 |
e1iz6B2 |
1IZ6 |
4.1.1 |
0.946 |
0.0 |
0.708 |
6.7|7.2|1 |
0.911 |
0.875 |
pymol |
na |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
1 |
6 |
no |
no |
PF20453 |
A0A4U0H6I3 |
1-294 |
nD2 |
101-300 |
200 |
e6hc2G1 |
6HC2 |
109.4.1 |
0.939 |
0.357 |
0.818 |
8.3|9.4|1 |
0.344 |
0.699 |
pymol |
na |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
10 |
0 |
no |
no |
PF20456 |
A0A2V2FZ61 |
4-336 |
nD1 |
41-180 |
140 |
e1ltlE1 |
1LTL |
2.1.1 |
0.947 |
0.0 |
0.0 |
5.6|6.6|1 |
0.894 |
1.346 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
3 |
6 |
yes:out |
yes:out |
PF20459 |
A0A6L5XGN1 |
2-267 |
nD1 |
1-160 |
160 |
e3jvoG1 |
3JVO |
4275.1.1 |
0.93 |
0.33 |
0.266 |
4.9|4.9|1 |
0.941 |
1.265 |
pymol |
more |
good_domain |
alpha arrays |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
4 |
2 |
no |
no |
PF20459 |
A0A1C5XWS4 |
4-272 |
nD1 |
6-75,101-140 |
110 |
e3jvoG1 |
3JVO |
4275.1.1 |
0.929 |
0.453 |
0.499 |
3.9|3.9|1 |
0.846 |
0.87 |
pymol |
more |
good_domain |
alpha arrays |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
5 |
0 |
no |
no |
PF20459 |
A0A1C5XWS4 |
4-272 |
nD2 |
141-239 |
99 |
e3jvoG1 |
3JVO |
4275.1.1 |
0.877 |
0.0 |
0.0 |
3.5|3.5|0 |
0.881 |
0.783 |
pymol |
more |
good_domain |
alpha arrays |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
Hypothetical protein YqbG-like |
4 |
0 |
no |
no |
PF20474 |
A0A251T0B5 |
590-743 |
nD2 |
646-740 |
95 |
e2ra8A1 |
2RA8 |
4210.1.1 |
0.852 |
0.0 |
0.0 |
3.0|3.0|1 |
0.816 |
0.805 |
pymol |
na |
good_domain |
a+b two layers |
WGR domain |
WGR domain |
WGR domain |
2 |
4 |
no |
no |
PF20484 |
A0A158DAR5 |
9-79 |
nD1 |
6-80 |
75 |
e2konA1 |
2KON |
4152.2.1 |
0.943 |
0.98 |
0.987 |
4.8|5.0|0 |
0.756 |
0.915 |
pymol |
more |
good_domain |
a+b two layers |
Shew3726-like |
Uncharacterized protein CV_2116 |
Uncharacterized protein CV_2116 |
2 |
4 |
no |
no |
PF20493 |
B6K7W2 |
1-198 |
nD1 |
6-90 |
85 |
e7bwwA2 |
7BWW |
192.17.1 |
0.866 |
0.0 |
0.0 |
3.6|3.6|1 |
0.822 |
1.771 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
Rabenosyn-5 Rab-binding domain-like |
Rabenosyn-5 Rab-binding domain-like |
4 |
0 |
no |
no |
PF20493 |
B6K7W2 |
1-198 |
nD2 |
101-195 |
95 |
e1kptA1 |
1KPT |
3887.1.1 |
0.929 |
0.0 |
0.0 |
6.9|6.9|1 |
0.838 |
0.905 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
2 |
6 |
no |
no |
PF20493 |
A0A162MAI6 |
67-269 |
nD2 |
176-270 |
95 |
e1kptA1 |
1KPT |
3887.1.1 |
0.932 |
0.0 |
0.0 |
6.0|6.2|1 |
0.782 |
0.905 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
2 |
6 |
yes:out |
no |
PF20493 |
A0A1E4SLZ8 |
46-247 |
nD2 |
151-245 |
95 |
e1kptA1 |
1KPT |
3887.1.1 |
0.929 |
0.0 |
0.0 |
7.0|7.0|1 |
0.842 |
0.905 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
2 |
6 |
yes:out |
no |
PF20495 |
B6JUW4 |
22-177 |
nD1 |
11-150 |
140 |
e3afgB2 |
3AFG |
10.1.2 |
0.899 |
0.0 |
0.73 |
8.1|8.9|0 |
0.932 |
0.892 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
9 |
no |
yes:out |
PF20495 |
B6K4P5 |
22-174 |
nD1 |
11-145 |
135 |
e7rrmA1 |
7RRM |
10.1.2 |
0.931 |
0.0 |
0.846 |
8.3|8.8|0 |
0.941 |
0.86 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
2 |
9 |
no |
yes:out |
PF20505 |
Q833D8 |
3-302 |
nD1 |
6-80,101-155,261-305 |
175 |
e7bxtM2 |
7BXT |
3435.1.1 |
0.925 |
0.0 |
0.0 |
6.8|7.3|1 |
0.899 |
1.326 |
pymol |
na |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
5 |
9 |
no |
no |
PF20505 |
A0A829I492 |
1-296 |
nD1 |
1-80,101-150,261-295 |
165 |
e4je3A1 |
4JE3 |
3435.1.1 |
0.892 |
0.0 |
0.0 |
8.0|8.0|1 |
0.641 |
1.25 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
5 |
9 |
no |
no |
PF20505 |
A0A6B4JJ99 |
1-291 |
nD1 |
6-295 |
290 |
e7bxtM2 |
7BXT |
3435.1.1 |
0.946 |
0.0 |
0.0 |
7.0|7.9|1 |
0.957 |
2.197 |
pymol |
more |
good_domain |
a+b two layers |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
Recombination-associated protein rdgC |
8 |
14 |
no |
no |
PF20507 |
A0A3C7VZV0 |
6-231 |
nD1 |
21-230 |
210 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.944 |
0.84 |
0.949 |
15.1|15.1|1 |
0.701 |
1.186 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
1 |
11 |
yes:out |
no |
PF20507 |
A0A3B7BHJ6 |
3-228 |
nD1 |
21-228 |
208 |
e4rl8C1 |
4RL8 |
5084.1.1 |
0.947 |
0.891 |
0.963 |
15.8|15.8|1 |
0.716 |
1.175 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
OMPA-like |
OMPA-like |
1 |
11 |
no |
no |
PF20521 |
A0A4Q2VIN1 |
62-184 |
nD1 |
23-180 |
158 |
e5v6jD1 |
5V6J |
3887.1.1 |
0.903 |
0.0 |
0.0 |
6.7|6.7|1 |
0.884 |
1.505 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
3 |
9 |
yes:out |
no |
PF20521 |
A0A0S7DQC4 |
35-160 |
nD1 |
1-25,51-170 |
145 |
e4ndsA1 |
4NDS |
3887.1.1 |
0.924 |
0.0 |
0.0 |
7.1|7.3|1 |
0.958 |
1.381 |
pymol |
more |
good_domain |
a+b two layers |
Yeast killer toxin-like |
Yeast killer toxin-like |
Yeast killer toxin-like |
3 |
8 |
no |
no |
PF20525 |
C5LUP1 |
21-546 |
nD1 |
21-35,66-165,186-250 |
180 |
e6e8nA1 |
6E8N |
71.1.1 |
0.92 |
0.0 |
0.632 |
9.2|10.7|1 |
0.849 |
0.947 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
12 |
yes:out |
no |
PF20525 |
C5M0A3 |
22-551 |
nD1 |
16-35,71-240 |
190 |
e4mxtA1 |
4MXT |
71.1.1 |
0.863 |
0.0 |
0.697 |
7.9|10.3|1 |
0.816 |
1.0 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
3 |
12 |
yes:in |
no |
PF20525 |
C5LXG1 |
22-543 |
nD1 |
21-35,66-160,181-240 |
170 |
e6jl9A1 |
6JL9 |
71.1.1 |
0.936 |
0.0 |
0.597 |
6.8|8.0|1 |
0.823 |
0.895 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
Lipoprotein localization factors LolAB |
2 |
11 |
yes:out |
no |
PF20529 |
A0A417NBE4 |
3-317 |
nD3 |
231-329 |
99 |
e4hwdD1 |
4HWD |
604.3.1 |
0.909 |
0.0 |
0.0 |
9.3|10.5|0 |
0.961 |
1.125 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
BAG domain |
BAG domain |
3 |
0 |
no |
no |
PF20529 |
C6J3I1 |
2-298 |
nD3 |
211-295 |
85 |
e2rkkA1 |
2RKK |
604.12.1 |
0.913 |
0.0 |
0.0 |
8.5|8.6|0 |
0.906 |
0.983 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
3 |
1 |
no |
no |
PF20529 |
A0A140L4P0 |
3-301 |
nD2 |
26-60,161-215 |
90 |
e5xvnF1 |
5XVN |
304.56.1 |
0.891 |
0.519 |
0.793 |
4.6|4.6|1 |
0.756 |
0.968 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
CRISPR associated protein Cas2-like |
CRISPR associated protein Cas2-like |
3 |
5 |
no |
no |
PF20530 |
A0A1C5E8J9 |
129-333 |
nD3 |
261-325 |
65 |
e4flzA3 |
4FLZ |
2.1.1 |
0.929 |
0.0 |
0.0 |
3.2|3.3|0 |
0.803 |
0.625 |
pymol |
more |
good_domain |
beta barrels |
OB-fold |
Nucleic acid-binding proteins |
Nucleic acid-binding proteins |
1 |
4 |
no |
no |
PF20531 |
A0A4P7JN92 |
1-121 |
nD1 |
31-120 |
90 |
e5szjB2 |
5SZJ |
192.29.1 |
0.949 |
0.0 |
0.0 |
5.9|5.9|1 |
0.945 |
1.184 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
yes:out |
no |
PF20544 |
A0A0M8XE50 |
1-210 |
nD1 |
6-35 |
30 |
e2aklA2 |
2AKL |
375.1.1 |
0.942 |
0.844 |
0.922 |
0.0|0.0|0 |
0.737 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF20544 |
A0A1H5CXU5 |
1-210 |
nD1 |
6-35 |
30 |
e2aklA2 |
2AKL |
375.1.1 |
0.939 |
0.839 |
0.919 |
0.0|0.0|1 |
0.737 |
0.536 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
0 |
3 |
no |
no |
PF20556 |
A0A2S0VPB9 |
1-123 |
nD2 |
26-100 |
75 |
e6zshC1 |
6ZSH |
192.29.1 |
0.898 |
0.0 |
0.0 |
8.5|8.7|0 |
0.843 |
0.987 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
3 |
0 |
no |
yes:2 |
PF20562 |
A0A0Q3I3F5 |
8-294 |
nD1 |
6-294 |
289 |
e5gmtA1 |
5GMT |
10.1.1 |
0.922 |
0.96 |
0.986 |
10.7|13.1|1 |
0.868 |
1.35 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
2 |
18 |
no |
no |
PF20562 |
A0A1H5RZ09 |
8-295 |
nD1 |
11-295 |
285 |
e5gmtA1 |
5GMT |
10.1.1 |
0.948 |
0.961 |
0.986 |
10.9|12.9|1 |
0.874 |
1.332 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Concanavalin A-like lectins/glucanases |
2 |
18 |
no |
no |
PF20563 |
A8RAD1 |
1-160 |
nD1 |
11-75,151-160 |
75 |
e7mq1B1 |
7MQ1 |
3826.1.1 |
0.892 |
0.0 |
0.0 |
6.3|6.3|1 |
0.745 |
0.852 |
pymol |
more |
good_domain |
alpha bundles |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
Copper-sensitive operon repressor (CsoR) |
3 |
0 |
no |
yes:2 |
PF20563 |
A0A417JIW4 |
4-148 |
nD1 |
11-145 |
135 |
e4d3fB3 |
4D3F |
129.1.1 |
0.931 |
0.0 |
0.0 |
4.7|4.7|1 |
0.8 |
1.055 |
pymol |
more |
good_domain |
alpha arrays |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
6-phosphogluconate dehydrogenase C-terminal domain-like |
4 |
0 |
no |
yes:4 |
PF20569 |
A0A3M2E7R9 |
4-153 |
nD1 |
6-155 |
150 |
e2jxpA1 |
2JXP |
7503.1.1 |
0.933 |
0.6 |
0.582 |
6.0|8.4|1 |
0.776 |
0.993 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
TolB, N-terminal domain |
TolB, N-terminal domain |
TolB, N-terminal domain |
3 |
4 |
no |
no |
PF20572 |
A0A1G7Y2M9 |
10-222 |
nD1 |
1-210 |
210 |
e4y21A1 |
4Y21 |
109.4.1 |
0.947 |
0.0 |
0.38 |
9.1|9.1|1 |
0.567 |
0.734 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
no |
PF20572 |
A0A1H3GXQ8 |
10-222 |
nD1 |
1-210 |
210 |
e6w2qA1 |
6W2Q |
109.3.1 |
0.925 |
0.913 |
0.0 |
6.9|8.6|1 |
0.444 |
1.055 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
8 |
0 |
no |
no |
PF20575 |
A0A830GIQ4 |
2-129 |
nD1 |
1-135 |
135 |
e3kgkB1 |
3KGK |
2485.1.1 |
0.949 |
0.0 |
0.0 |
4.1|6.4|1 |
0.891 |
1.195 |
pymol |
more |
good_domain |
a+b three layers |
Thioredoxin-like |
Thioredoxin-like |
Thioredoxin-like |
3 |
7 |
no |
no |
PF20577 |
A0A1I5MWD3 |
5-77 |
nD1 |
1-80 |
80 |
e5i8jA1 |
5I8J |
3986.2.1 |
0.85 |
0.0 |
0.0 |
4.4|4.4|1 |
0.851 |
1.322 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
3 |
4 |
no |
no |
PF20577 |
W1I6A7 |
5-71 |
nD1 |
1-75 |
75 |
e5hy3B1 |
5HY3 |
3986.2.1 |
0.865 |
0.0 |
0.0 |
4.5|4.5|1 |
0.877 |
1.24 |
pymol |
more |
good_domain |
a+b two layers |
GTP-binding protein lepA C-terminal domain-like |
Antitoxin Dmd |
Antitoxin Dmd |
3 |
4 |
no |
no |
PF20583 |
A0A2Z5GC45 |
33-407 |
nD1 |
31-410 |
380 |
e3ty1C1 |
3TY1 |
12.3.1 |
0.922 |
0.986 |
0.992 |
20.1|22.3|1 |
0.897 |
1.352 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
5 |
20 |
yes:out |
no |
PF20583 |
A0A5C5X222 |
33-419 |
nD1 |
36-410 |
375 |
e3ty1C1 |
3TY1 |
12.3.1 |
0.932 |
0.985 |
0.992 |
19.5|21.5|1 |
0.894 |
1.335 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
5 |
20 |
yes:out |
no |
PF20583 |
Q7UHK2 |
35-420 |
nD1 |
36-420 |
385 |
e3ty1C1 |
3TY1 |
12.3.1 |
0.921 |
0.988 |
0.993 |
20.1|21.7|1 |
0.896 |
1.37 |
pymol |
more |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
supersandwich |
supersandwich |
5 |
20 |
yes:out |
no |
PF20584 |
A0A5S9VFW1 |
36-114 |
nD1 |
21-115 |
95 |
e4hw9G8 |
4HW9 |
5058.1.1 |
0.898 |
0.0 |
0.0 |
6.4|6.4|1 |
0.936 |
0.984 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
3 |
0 |
no |
yes:2 |
PF20584 |
A0A562SP69 |
18-91 |
nD1 |
6-90 |
85 |
e4hw9G8 |
4HW9 |
5058.1.1 |
0.869 |
0.0 |
0.0 |
5.5|5.7|1 |
0.81 |
0.881 |
pymol |
more |
good_domain |
alpha bundles |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
Mechanosensitive channel protein MscS (YggB), transmembrane region |
3 |
0 |
no |
yes:2 |
PF20586 |
A0A521IKK6 |
12-110 |
nD2 |
6-35,61-115 |
85 |
e5nenB1 |
5NEN |
5086.1.1 |
0.875 |
0.0 |
0.0 |
7.5|7.5|1 |
0.438 |
1.006 |
pymol |
more |
good_domain |
alpha bundles |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
helical hairpin of HlyD-like secretion proteins |
3 |
2 |
no |
no |
PF20592 |
A0A1H4KH38 |
64-230 |
nD1 |
71-225,346-360 |
170 |
e2xtlB15 |
2XTL |
11.1.5 |
0.942 |
0.0 |
0.0 |
5.1|5.1|1 |
0.872 |
1.104 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
11 |
yes:out |
no |
PF20593 |
A0A5B9WAC7 |
1-107 |
nD1 |
1-55 |
55 |
e2wnmA1 |
2WNM |
3115.2.1 |
0.881 |
0.585 |
0.565 |
5.1|5.5|0 |
0.78 |
0.932 |
pymol |
more |
good_domain |
a+b two layers |
GP2-like |
GP2 |
GP2 |
1 |
3 |
no |
no |
PF20595 |
A0A5R8QG31 |
86-249 |
nD1 |
81-250 |
170 |
e5dz9A2 |
5DZ9 |
11.1.5 |
0.913 |
0.0 |
0.0 |
7.7|8.7|1 |
0.921 |
1.104 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
1 |
10 |
yes:out |
no |
PF20595 |
A0A5R8Q7L0 |
82-245 |
nD1 |
76-245 |
170 |
e7mekA1 |
7MEK |
11.1.5 |
0.859 |
0.0 |
0.0 |
6.9|9.5|1 |
0.945 |
1.104 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
14 |
yes:out |
no |
PF20595 |
A0A5R8Q944 |
84-247 |
nD1 |
81-250 |
170 |
e5jpnC2 |
5JPN |
11.1.5 |
0.861 |
0.0 |
0.309 |
7.2|10.3|1 |
0.966 |
1.104 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
3 |
12 |
yes:out |
no |
PF20600 |
A0A257I1G7 |
10-39 |
nD1 |
21-75 |
55 |
e4f3lA1 |
4F3L |
105.1.1 |
0.911 |
0.0 |
0.0 |
2.7|2.7|1 |
0.673 |
0.821 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
HLH-like |
HLH, helix-loop-helix DNA-binding domain |
HLH, helix-loop-helix DNA-binding domain |
3 |
2 |
no |
no |
PF20602 |
A0A4R5NPD6 |
38-177 |
nD1 |
36-220 |
185 |
e4iu2A1 |
4IU2 |
11.1.5 |
0.947 |
0.723 |
0.309 |
5.1|10.2|1 |
0.843 |
1.201 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
12 |
yes:out |
no |
PF20607 |
A0A517YEV1 |
7-48 |
nD1 |
6-60 |
55 |
e7kuwA1 |
7KUW |
3009.1.1 |
0.885 |
0.409 |
0.409 |
5.0|5.0|1 |
0.811 |
0.846 |
pymol |
more |
good_domain |
alpha arrays |
Insertion subdomain in DsbA-like |
Insertion subdomain in DsbA-like |
Insertion subdomain in DsbA-like |
3 |
0 |
no |
no |
PF20609 |
T0S6G8 |
27-307 |
nD2 |
106-160,186-255 |
125 |
e6qvhA1 |
6QVH |
633.21.1 |
0.87 |
0.0 |
0.0 |
8.6|8.6|1 |
0.796 |
1.157 |
pymol |
more |
good_domain |
alpha bundles |
Bromodomain-like |
Uncharacterized protein PA2107 |
Uncharacterized protein PA2107 |
5 |
6 |
yes:out |
yes:out |
PF20611 |
A0A229SXN0 |
9-161 |
nD1 |
1-168 |
168 |
e3lsoB7 |
3LSO |
11.1.1 |
0.911 |
0.183 |
0.885 |
11.4|11.4|1 |
0.914 |
1.556 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
10 |
no |
no |
PF20611 |
A0A0N9I9B0 |
6-169 |
nD1 |
1-175 |
175 |
e3butA1 |
3BUT |
11.1.1 |
0.915 |
0.0 |
0.753 |
4.4|12.3|1 |
0.933 |
1.62 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
10 |
no |
no |
PF20611 |
A0A1V2QH20 |
6-165 |
nD1 |
1-170 |
170 |
e3hrzB1 |
3HRZ |
11.1.1 |
0.919 |
0.0 |
0.876 |
5.4|12.4|1 |
0.93 |
1.574 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
1 |
10 |
no |
no |
PF20617 |
A0A1J1LQP8 |
1-162 |
nD1 |
6-160 |
155 |
e6egcA1 |
6EGC |
192.29.1 |
0.924 |
0.0 |
0.0 |
9.3|9.3|1 |
0.876 |
2.039 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:4 |
PF20621 |
A0A0W7YWS4 |
8-171 |
nD1 |
6-130 |
125 |
e3qmqC1 |
3QMQ |
304.4.1 |
0.885 |
0.0 |
0.878 |
5.7|5.7|1 |
0.85 |
1.136 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
3 |
5 |
no |
no |
PF20621 |
A0A3N5N998 |
3-154 |
nD1 |
1-130 |
130 |
e3qmqC1 |
3QMQ |
304.4.1 |
0.873 |
0.0 |
0.857 |
5.8|5.8|1 |
0.854 |
1.182 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Dimeric alpha+beta barrel |
Dimeric alpha+beta barrel |
3 |
6 |
no |
no |
PF20653 |
C1EEF9 |
176-689 |
nD1 |
26-300,346-685 |
615 |
e5y5aA1 |
5Y5A |
109.4.1 |
0.864 |
0.0 |
0.999 |
6.5|17.6|1 |
0.438 |
2.15 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
17 |
0 |
no |
no |
PF20670 |
L1JJI9 |
70-267 |
nD1 |
76-265 |
190 |
e4tq2A1 |
4TQ2 |
9.1.1 |
0.869 |
0.0 |
0.06 |
9.0|9.0|1 |
0.842 |
1.242 |
pymol |
more |
good_domain |
beta barrels |
Lipocalins/Streptavidin |
Lipocalins |
Lipocalins |
3 |
10 |
no |
no |
PF20671 |
G0V644 |
244-592 |
nD2 |
111-450,466-580,636-760 |
580 |
e5k7vC2 |
5K7V |
601.1.1 |
0.851 |
0.0 |
0.0 |
9.1|14.4|0 |
0.662 |
4.427 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
alpha-catenin/vinculin |
18 |
0 |
no |
no |
PF20683 |
R6SVY6 |
488-659 |
nD1 |
6-660 |
655 |
e5depD1 |
5DEP |
208.1.1 |
0.889 |
0.99 |
0.995 |
15.3|21.2|1 |
0.875 |
3.68 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded left-handed beta-helix |
Trimeric LpxA-like enzymes |
Trimeric LpxA-like enzymes |
14 |
32 |
no |
no |
PF20689 |
A0A838RQ28 |
2-100 |
nD1 |
1-105 |
105 |
e7k3rD1 |
7K3R |
110.1.1 |
0.893 |
0.0 |
0.0 |
3.5|4.3|1 |
0.876 |
1.094 |
pymol |
more |
good_domain |
alpha arrays |
DEATH domain |
DEATH domain |
DEATH domain |
6 |
1 |
no |
no |
PF20697 |
A0A1M4YVU4 |
14-266 |
nD1 |
6-215,256-270 |
225 |
e6iw6B2 |
6IW6 |
316.1.1 |
0.939 |
0.936 |
0.982 |
7.1|7.1|1 |
0.724 |
1.301 |
pymol |
more |
good_domain |
a+b three layers |
Nucleotidyltransferase-like |
Nucleotidyltransferase |
Nucleotidyltransferase |
7 |
7 |
no |
no |
PF20700 |
A0A6J8ATN6 |
75-387 |
nD1 |
71-170,481-495 |
115 |
e4rv9A1 |
4RV9 |
375.1.1 |
0.944 |
0.0 |
0.321 |
3.2|3.2|1 |
0.822 |
2.054 |
pymol |
more |
good_domain |
few secondary structure elements |
Rubredoxin-like |
Rubredoxin-related |
Rubredoxin-related |
5 |
4 |
no |
no |
PF20700 |
A0A6J1MXS8 |
83-440 |
nD1 |
81-155 |
75 |
e1cjxB3 |
1CJX |
211.1.1 |
0.864 |
0.0 |
0.0 |
3.7|3.7|1 |
0.789 |
1.103 |
pymol |
more |
good_domain |
a+b two layers |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
2 |
3 |
no |
no |
PF20700 |
A0A226DUQ6 |
104-457 |
nD1 |
101-165 |
65 |
e4p78D1 |
4P78 |
330.7.1 |
0.872 |
0.0 |
0.0 |
3.7|3.7|1 |
0.701 |
0.985 |
pymol |
more |
good_domain |
a+b two layers |
dsRBD-like |
PI-Pfui intein middle domain |
PI-Pfui intein middle domain |
1 |
3 |
no |
no |
PF20701 |
A0A3M8QAC7 |
1-104 |
nD1 |
6-80 |
75 |
e3a1yA1 |
3A1Y |
1091.1.1 |
0.856 |
0.0 |
0.0 |
3.6|3.6|1 |
0.885 |
1.282 |
pymol |
more |
good_domain |
alpha arrays |
60S acidic ribosomal protein P1/P2 |
60S acidic ribosomal protein P1/P2 |
60S acidic ribosomal protein P1/P2 |
5 |
0 |
no |
no |
PF20701 |
A0A073CLS7 |
1-99 |
nD1 |
1-100 |
100 |
e3mayG1 |
3MAY |
605.6.1 |
0.921 |
0.0 |
0.0 |
3.6|3.6|0 |
0.724 |
1.136 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
ROP-like |
HP1531-like |
HP1531-like |
6 |
0 |
no |
no |
PF20702 |
A0A6I4TD24 |
57-304 |
nD3 |
261-320 |
60 |
e2qenA5 |
2QEN |
101.1.2 |
0.918 |
0.992 |
0.0 |
3.6|4.7|0 |
0.682 |
0.632 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
winged |
4 |
2 |
no |
no |
PF20704 |
A0A2A3HS26 |
1-129 |
nD1 |
21-120 |
100 |
e2cpmA1 |
2CPM |
320.1.1 |
0.907 |
0.0 |
0.0 |
3.0|3.0|1 |
0.839 |
1.333 |
pymol |
more |
good_domain |
a+b two layers |
R3H domain-like |
R3H domain |
R3H domain |
5 |
3 |
no |
no |
PF20708 |
A0A812SHR3 |
276-577 |
nD6 |
466-510 |
45 |
e2cobA1 |
2COB |
101.1.1 |
0.924 |
0.0 |
0.0 |
3.8|3.8|1 |
0.853 |
0.616 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
2 |
2 |
no |
no |
PF20708 |
A0A812SHR3 |
276-577 |
nD7 |
546-590 |
45 |
e2cobA1 |
2COB |
101.1.1 |
0.868 |
0.0 |
0.0 |
2.8|2.9|1 |
0.888 |
0.616 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
1 |
no |
no |
PF20708 |
A0A812W5P5 |
136-408 |
nD5 |
296-355 |
60 |
e3g1cA1 |
3G1C |
101.1.6 |
0.871 |
0.0 |
0.0 |
2.5|2.8|0 |
0.808 |
0.632 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
TrpR |
2 |
2 |
no |
no |
PF20710 |
K0SLM0 |
11-93 |
nD1 |
6-95 |
90 |
e7kuwA1 |
7KUW |
3009.1.1 |
0.902 |
0.0 |
0.0 |
3.6|3.6|1 |
0.901 |
1.385 |
pymol |
more |
good_domain |
alpha arrays |
Insertion subdomain in DsbA-like |
Insertion subdomain in DsbA-like |
Insertion subdomain in DsbA-like |
3 |
2 |
no |
no |
PF20710 |
B7G967 |
50-134 |
nD1 |
46-150 |
105 |
e5gzbA1 |
5GZB |
101.1.1 |
0.907 |
0.0 |
0.0 |
4.1|4.7|0 |
0.85 |
1.438 |
pymol |
more |
good_domain |
alpha arrays |
HTH |
HTH |
tri-helical |
3 |
3 |
no |
no |
PF20712 |
V4JLK8 |
126-192 |
nD4 |
111-230 |
120 |
e4iloB5 |
4ILO |
3755.3.1 |
0.892 |
0.0 |
0.0 |
6.9|7.0|0 |
0.527 |
0.698 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
0 |
no |
yes:2 |
PF20715 |
A0A0L7KCS3 |
64-221 |
nD2 |
71-220 |
150 |
e6xf1A2 |
6XF1 |
604.1.1 |
0.922 |
0.797 |
0.29 |
8.7|8.7|1 |
0.616 |
1.364 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
4 |
0 |
no |
no |
PF20717 |
A0A072PP86 |
29-452 |
nD2 |
291-405,427-460 |
149 |
e5cwcA1 |
5CWC |
159.1.2 |
0.89 |
0.0 |
0.0 |
5.6|5.6|1 |
0.332 |
1.62 |
pymol |
more |
good_domain |
alpha bundles |
all-alpha NTP pyrophosphatases |
all-alpha NTP pyrophosphatases |
MazG-related |
8 |
2 |
no |
no |
PF20722 |
A0A0C9ZP99 |
59-215 |
nD1 |
61-125,151-320 |
235 |
e4dovA1 |
4DOV |
4.1.1 |
0.944 |
0.0 |
0.119 |
7.6|7.6|1 |
0.941 |
2.938 |
pymol |
more |
good_domain |
beta barrels |
SH3 |
SH3 |
SH3 |
5 |
11 |
no |
no |
PF20723 |
T1K997 |
301-442 |
nD2 |
291-435 |
145 |
e1chcA1 |
1CHC |
376.1.1 |
0.878 |
0.0 |
0.794 |
2.2|3.0|1 |
0.864 |
1.859 |
pymol |
more |
good_domain |
few secondary structure elements |
RING/U-box-like |
RING/U-box-like |
RING/U-box |
2 |
8 |
no |
no |
PF20730 |
A0A563DIK1 |
16-91 |
nD1 |
16-105 |
90 |
e1u00A2 |
1U00 |
632.7.1 |
0.87 |
0.0 |
0.0 |
6.5|6.7|0 |
0.731 |
0.865 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
3 |
0 |
no |
yes:3 |
PF20769 |
A8MIH5 |
27-162 |
nD2 |
36-205 |
170 |
e7oseA2 |
7OSE |
5069.1.1 |
0.916 |
0.0 |
0.0 |
10.7|10.7|1 |
0.724 |
0.802 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Transmembrane di-heme cytochromes |
6 |
0 |
yes:out |
no |
PF20769 |
A5HY24 |
31-166 |
nD2 |
41-170 |
130 |
e6egcA1 |
6EGC |
192.29.1 |
0.947 |
0.0 |
0.0 |
11.4|11.4|1 |
0.83 |
1.711 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
bMERB domain (bivalent Mical/EHBP Rab binding) |
bMERB domain (bivalent Mical/EHBP Rab binding) |
5 |
0 |
no |
yes:out |
PF20775 |
Q6FXL0 |
108-600 |
nD2 |
81-260 |
180 |
e3butA1 |
3BUT |
11.1.1 |
0.889 |
0.871 |
0.812 |
3.7|3.9|1 |
0.759 |
1.667 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
6 |
8 |
no |
yes:out |
PF20775 |
Q6FXL0 |
108-600 |
nD3 |
261-430 |
170 |
e5e80A1 |
5E80 |
11.1.1 |
0.937 |
0.0 |
0.936 |
2.8|4.4|1 |
0.785 |
1.574 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
12 |
no |
yes:out |
PF20776 |
C5MIW5 |
108-195 |
nD1 |
113-190 |
78 |
e3u60A2 |
3U60 |
138.1.1 |
0.911 |
0.0 |
0.0 |
2.9|2.9|1 |
0.523 |
0.788 |
pymol |
more |
good_domain |
alpha arrays |
DNA polymerase III clamp loader subunits, C-terminal domain |
DNA polymerase III clamp loader subunits, C-terminal domain |
DNA polymerase III clamp loader subunits, C-terminal domain |
4 |
1 |
no |
no |
PF20776 |
C4QVQ3 |
136-215 |
nD1 |
141-210 |
70 |
e2hjqA1 |
2HJQ |
130.1.1 |
0.859 |
0.21 |
0.38 |
3.4|3.4|1 |
0.846 |
1.273 |
pymol |
more |
good_domain |
alpha arrays |
LEM/SAP HeH motif-like |
LEM/SAP HeH motif |
LEM/SAP HeH motif |
4 |
1 |
no |
no |
PF20843 |
B6GZX3 |
379-531 |
nD3 |
376-530 |
155 |
e6f2pA5 |
6F2P |
10.1.2 |
0.941 |
0.0 |
0.0 |
15.3|15.3|1 |
0.943 |
0.987 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
0 |
10 |
yes:out |
yes:out |
PF20843 |
N1JED6 |
389-546 |
nD3 |
221-235,386-550 |
180 |
e6f2pA5 |
6F2P |
10.1.2 |
0.901 |
0.0 |
0.0 |
15.3|15.3|1 |
0.983 |
1.146 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
11 |
yes:out |
yes:out |
PF20843 |
Q0CIQ6 |
379-534 |
nD3 |
376-535 |
160 |
e6f2pA5 |
6F2P |
10.1.2 |
0.936 |
0.0 |
0.0 |
16.2|16.2|1 |
0.967 |
1.019 |
pymol |
more |
good_domain |
beta sandwiches |
jelly-roll |
Concanavalin A-like |
Galactose-binding domain-like |
1 |
11 |
yes:out |
yes:out |
PF20846 |
Q5DTT8 |
1-92 |
nD1 |
1-95 |
95 |
e5z9zA1 |
5Z9Z |
304.9.1 |
0.948 |
0.0 |
0.606 |
6.2|6.2|1 |
0.916 |
1.0 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
RNA-binding domain, RBD |
RNA-binding domain, RBD |
2 |
5 |
no |
no |
PF20865 |
G1QC12 |
640-876 |
nD6 |
641-785 |
145 |
e4iloB5 |
4ILO |
3755.3.1 |
0.857 |
0.0 |
0.0 |
9.1|9.2|0 |
0.599 |
0.843 |
pymol |
more |
good_domain |
alpha bundles |
YscO-like |
CT398 helical hairpin |
CT398 helical hairpin |
3 |
2 |
no |
no |
PF20918 |
A0A4R3YYU0 |
2-106 |
nD1 |
1-115 |
115 |
e6f2rQ1 |
6F2R |
319.1.1 |
0.871 |
0.0 |
0.0 |
3.9|4.9|1 |
0.85 |
1.055 |
pymol |
more |
good_domain |
beta sandwiches |
HSP20-like |
HSP20-like chaperones |
HSP20-like chaperones |
0 |
7 |
no |
no |
PF20966 |
A0A0C5V7E2 |
12-173 |
nD1 |
6-175 |
170 |
e5cwoB1 |
5CWO |
109.3.1 |
0.864 |
0.0 |
0.0 |
6.8|6.8|1 |
0.643 |
0.854 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
0 |
no |
yes:6 |
PF20968 |
A0A2R5FBE7 |
35-183 |
nD1 |
11-190 |
180 |
e1r0dI1 |
1R0D |
601.1.2 |
0.906 |
0.0 |
0.0 |
6.8|7.0|0 |
0.807 |
1.091 |
pymol |
more |
good_domain |
alpha bundles |
Four-helical up-and-down bundle |
alpha-catenin-related |
I/LWEQ domain (Pfam 01608) |
6 |
0 |
no |
yes:6 |
PF20969 |
I0XV54 |
33-193 |
nD1 |
31-305 |
275 |
e7rdrC2 |
7RDR |
109.3.1 |
0.869 |
0.0 |
0.0 |
7.7|8.7|0 |
0.43 |
1.382 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
7 |
0 |
no |
yes:6 |
PF20969 |
E1R811 |
7-165 |
nD1 |
6-165 |
160 |
e5cwlA1 |
5CWL |
109.3.1 |
0.873 |
0.0 |
0.0 |
7.8|7.8|1 |
0.616 |
0.804 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
6 |
0 |
no |
yes:6 |
PF20970 |
A0A2V1GVL9 |
9-199 |
nD1 |
1-215 |
215 |
e5zi1B1 |
5ZI1 |
5000.4.1 |
0.856 |
0.0 |
0.0 |
8.4|9.0|1 |
0.777 |
0.943 |
pymol |
more |
good_domain |
alpha arrays |
Toxins' membrane translocation domains |
delta-Endotoxin (insectocide), N-terminal domain |
delta-Endotoxin (insectocide), N-terminal domain |
6 |
0 |
yes:in |
yes:5 |
PF20971 |
K6DDI0 |
4-166 |
nD1 |
6-150 |
145 |
e5h78B1 |
5H78 |
109.3.1 |
0.888 |
0.0 |
0.0 |
5.6|5.6|1 |
0.503 |
0.729 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
Ankyrin repeat |
Ankyrin repeat |
5 |
0 |
no |
yes:5 |
PF20973 |
A0A2H6BIJ5 |
15-219 |
nD1 |
6-245 |
240 |
e4mesB1 |
4MES |
604.12.1 |
0.931 |
0.0 |
0.0 |
7.8|9.0|0 |
0.901 |
2.775 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
8 |
2 |
no |
yes:7 |
PF20973 |
A0A345ZQK8 |
18-223 |
nD1 |
6-225 |
220 |
e4tkrB1 |
4TKR |
604.12.1 |
0.892 |
0.0 |
0.0 |
7.1|9.1|0 |
0.832 |
2.543 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
7 |
1 |
no |
yes:7 |
PF20973 |
A0A1C7NZ22 |
15-219 |
nD1 |
6-220 |
215 |
e4mesB1 |
4MES |
604.12.1 |
0.915 |
0.0 |
0.0 |
8.9|9.3|0 |
0.904 |
2.486 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
6 |
2 |
no |
yes:7 |
PF20975 |
Q8EGP7 |
1-339 |
nD3 |
81-160 |
80 |
e4h6hD2 |
4H6H |
632.15.1 |
0.948 |
0.0 |
0.0 |
8.1|8.1|1 |
0.909 |
1.0 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Staphylococcal complement inhibitor (SCIN) |
Staphylococcal complement inhibitor (SCIN) |
3 |
0 |
no |
no |
PF20975 |
Q9KTK2 |
4-350 |
nD2 |
101-165 |
65 |
e5tkyA1 |
5TKY |
632.7.1 |
0.882 |
0.0 |
0.0 |
6.4|7.1|1 |
0.695 |
0.625 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
3 |
0 |
no |
no |
PF20989 |
B4JBV8 |
120-244 |
nD2 |
121-245 |
125 |
e6c10A2 |
6C10 |
11.1.1 |
0.883 |
0.0 |
0.0 |
6.3|6.7|0 |
0.698 |
1.157 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
3 |
4 |
yes:out |
yes:out |
PF20989 |
Q9VLQ0 |
121-245 |
nD2 |
121-245 |
125 |
e4mzvA3 |
4MZV |
304.151.1 |
0.904 |
0.0 |
0.0 |
5.3|5.3|1 |
0.804 |
1.196 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-beta plaits |
Ferredoxin-like domain of receptor-type protein tyrosine phosphatase |
Ferredoxin-like domain of receptor-type protein tyrosine phosphatase |
3 |
4 |
yes:out |
yes:out |
PF20996 |
A0A226PEP9 |
23-193 |
nD1 |
6-200 |
195 |
e5e85A2 |
5E85 |
632.7.1 |
0.86 |
0.0 |
0.0 |
8.3|8.4|0 |
0.968 |
1.875 |
pymol |
more |
good_domain |
alpha bundles |
immunoglobulin/albumin-binding domain-like |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
Heat shock protein 70kD (HSP70), C-terminal subdomain |
4 |
5 |
no |
no |
PF21001 |
A0A0B1ZVU7 |
13-121 |
nD1 |
6-35,61-130 |
100 |
e4ysxG1 |
4YSX |
5069.1.3 |
0.924 |
0.0 |
0.0 |
5.3|5.6|0 |
0.754 |
0.775 |
pymol |
more |
good_domain |
alpha bundles |
Transmembrane heme-binding four-helical bundle |
Transmembrane heme-binding four-helical bundle |
Fumarate reductase respiratory complex transmembrane subunits |
4 |
0 |
no |
yes:3 |
PF21009 |
Q6UWP8 |
96-479 |
nD2 |
126-440 |
315 |
e6nw9C1 |
6NW9 |
207.2.1 |
0.907 |
0.0 |
0.0 |
16.8|21.9|0 |
0.755 |
0.829 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Pectin lyase-like |
Pectin lyase-like |
0 |
19 |
yes:out |
no |
PF21012 |
Q2S6D0 |
57-517 |
nD1 |
46-430,451-515 |
450 |
e4ql0A3 |
4QL0 |
5084.5.1 |
0.9 |
0.0 |
0.902 |
17.8|17.8|1 |
0.84 |
1.223 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
2 |
22 |
yes:out |
no |
PF21012 |
A0A2S9JU57 |
4-472 |
nD1 |
1-470 |
470 |
e6ofrA1 |
6OFR |
5084.5.3 |
0.869 |
0.944 |
0.966 |
11.8|17.2|1 |
0.664 |
0.831 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Ligand-gated protein channel |
2 |
21 |
no |
no |
PF21013 |
K7GGC3 |
3-527 |
nD1 |
1-255 |
255 |
e3prnA1 |
3PRN |
5084.5.1 |
0.881 |
0.0 |
0.0 |
12.4|14.6|0 |
0.822 |
0.693 |
pymol |
more |
good_domain |
beta barrels |
Outer membrane meander beta-barrels |
Porins |
Porin |
3 |
16 |
no |
no |
PF21015 |
A0A369BGL5 |
527-670 |
nD4 |
511-665 |
155 |
e2o3bB1 |
2O3B |
243.9.1 |
0.869 |
0.0 |
0.0 |
4.6|4.6|1 |
0.753 |
1.033 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
Nuclease A inhibitor (NuiA)-related |
Nuclease A inhibitor (NuiA)-related |
3 |
6 |
no |
yes:out |
PF21030 |
A0A669E5U5 |
29-327 |
nD1 |
16-510 |
495 |
e6nd4N2 |
6ND4 |
5.1.4 |
0.883 |
0.998 |
0.999 |
14.5|25.4|0 |
0.929 |
1.379 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
31 |
no |
no |
PF21031 |
Q9H977 |
1-334 |
nD1 |
1-334 |
334 |
e6lqpB21 |
6LQP |
5.1.4 |
0.926 |
0.999 |
0.999 |
26.1|32.8|1 |
0.936 |
0.93 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
27 |
no |
no |
PF21031 |
A0A7L1L2F2 |
1-336 |
nD1 |
1-335 |
335 |
e7mqaLQ2 |
7MQA |
5.1.4 |
0.929 |
0.998 |
0.999 |
25.6|33.2|1 |
0.955 |
0.933 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
1 |
27 |
no |
no |
PF21031 |
A0A814DCK9 |
8-339 |
nD1 |
1-65,86-340 |
320 |
e6lqp3F1 |
6LQP |
5.1.4 |
0.935 |
0.998 |
0.999 |
29.6|31.5|1 |
0.923 |
0.891 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
0 |
26 |
no |
no |
PF21034 |
A0A3B4ZTW2 |
54-526 |
nD1 |
6-285,301-453,501-660 |
593 |
e5teeA1 |
5TEE |
5.1.4 |
0.918 |
0.992 |
0.998 |
14.6|28.7|1 |
0.823 |
1.652 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
29 |
no |
no |
PF21034 |
Q9H6U6 |
58-536 |
nD1 |
21-290,306-455,521-555,581-695 |
570 |
e5teeA1 |
5TEE |
5.1.4 |
0.933 |
0.993 |
0.998 |
14.3|25.9|1 |
0.906 |
1.588 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
5 |
30 |
no |
no |
PF21034 |
A0A6J2MHI7 |
54-532 |
nD2 |
11-250,301-460,511-583,606-680 |
548 |
e5teeA1 |
5TEE |
5.1.4 |
0.909 |
0.992 |
0.997 |
16.4|30.4|1 |
0.894 |
1.526 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
beta-propeller-like |
beta-propeller |
7-bladed |
3 |
30 |
no |
no |
PF21051 |
A0A6P6K9U8 |
8-39 |
nD1 |
6-55 |
50 |
e2xtcA1 |
2XTC |
558.1.1 |
0.89 |
0.408 |
0.904 |
3.0|7.6|0 |
0.605 |
0.99 |
pymol |
more |
good_domain |
alpha duplicates or obligate multimers |
Lis-homology dimerization domain |
Lis-homology dimerization domain |
Lis-homology dimerization domain |
3 |
0 |
no |
no |
PF21055 |
A0A444SFB2 |
704-881 |
nD3 |
191-890 |
700 |
e6h02A5 |
6H02 |
109.4.1 |
0.938 |
0.0 |
0.154 |
5.5|10.2|0 |
0.851 |
2.448 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
26 |
3 |
no |
yes:1 |
PF21058 |
A6NGW2 |
662-1076 |
nD6 |
271-305,661-795 |
170 |
e1s35A1 |
1S35 |
604.1.1 |
0.879 |
0.0 |
0.0 |
5.8|5.8|1 |
0.714 |
1.545 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
Spectrin repeat |
Spectrin repeat |
7 |
0 |
yes:out |
no |
PF21058 |
A6NGW2 |
662-1076 |
nD7 |
796-915,921-1040,1046-1105,1131-1450,1456-1670 |
835 |
e4b8jA1 |
4B8J |
109.4.1 |
0.922 |
0.0 |
0.0 |
4.3|6.8|1 |
0.418 |
2.92 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
44 |
0 |
yes:out |
no |
PF21059 |
V4AQA9 |
507-614 |
nD3 |
496-635 |
140 |
e4ca1B1 |
4CA1 |
11.10.1 |
0.889 |
0.0 |
0.0 |
7.4|9.3|1 |
0.744 |
0.909 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
TRAF domain-like |
TRAF domain-like |
2 |
9 |
no |
no |
PF21059 |
A0A6P5A9K2 |
525-631 |
nD2 |
521-650 |
130 |
e4ca1B1 |
4CA1 |
11.10.1 |
0.891 |
0.0 |
0.0 |
8.3|10.4|1 |
0.736 |
0.844 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
TRAF domain-like |
TRAF domain-like |
2 |
9 |
no |
no |
PF21647 |
A5AIH8 |
397-719 |
nD2 |
406-530,616-720 |
230 |
e4p1nB1 |
4P1N |
604.12.1 |
0.945 |
0.0 |
0.0 |
8.4|8.5|0 |
0.935 |
2.659 |
pymol |
more |
good_domain |
alpha bundles |
Spectrin repeat-like |
MIT domain |
MIT domain |
6 |
0 |
no |
no |
PF21656 |
S9VN81 |
43-137 |
nD1 |
26-300 |
275 |
e4ohxA1 |
4OHX |
2004.1.1 |
0.851 |
0.0 |
0.0 |
5.5|6.5|0 |
0.749 |
1.233 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
P-loop domains-like |
P-loop domains-related |
P-loop containing nucleoside triphosphate hydrolases |
8 |
8 |
yes:out |
yes:out |
PF21717 |
H0W7D5 |
83-144 |
nD1 |
81-140 |
60 |
e7ofhL2 |
7OFH |
327.16.1 |
0.899 |
0.0 |
0.0 |
5.0|5.0|1 |
0.901 |
0.839 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
Ring-building motif II in type III secretion system |
Ring-building motif II in type III secretion system |
2 |
3 |
no |
no |
PF21717 |
A0A7N4NZS0 |
145-205 |
nD2 |
141-200 |
60 |
e3u1kC6 |
3U1K |
327.11.2 |
0.93 |
0.0 |
0.708 |
6.0|6.0|1 |
0.794 |
0.706 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Eukaryotic type KH-domain (KH-domain type I) |
2 |
3 |
no |
no |
PF21718 |
A0A671DWV3 |
382-510 |
nD5 |
371-450 |
80 |
e6gqeA1 |
6GQE |
327.11.2 |
0.927 |
0.0 |
0.0 |
6.9|6.9|1 |
0.843 |
0.941 |
pymol |
more |
good_domain |
a+b two layers |
Alpha-lytic protease prodomain-like |
KH-domains |
Eukaryotic type KH-domain (KH-domain type I) |
3 |
3 |
no |
no |
PF21722 |
A0A518G2T1 |
53-281 |
nD1 |
21-55,81-123,207-218 |
90 |
e4aw7A1 |
4AW7 |
12.1.1 |
0.85 |
0.0 |
0.0 |
2.2|2.2|1 |
0.52 |
1.0 |
pymol |
na |
good_domain |
beta sandwiches |
Glycosyl hydrolase domain-like |
Glycosyl hydrolase domain |
Glycosyl hydrolase domain |
0 |
10 |
no |
no |
PF21731 |
A0A0K1ECD1 |
50-189 |
nD1 |
67-115,151-184 |
83 |
e2ja4A1 |
2JA4 |
358.1.1 |
0.886 |
0.0 |
0.0 |
4.4|4.4|1 |
0.668 |
0.776 |
pymol |
more |
good_domain |
a+b complex topology |
SRCR-like |
SRCR-like |
SRCR-like |
0 |
6 |
yes:out |
no |
PF21736 |
Q02721 |
42-242 |
nD1 |
1-240 |
240 |
e2zbkF3 |
2ZBK |
212.1.1 |
0.943 |
0.0 |
0.0 |
5.0|5.2|1 |
0.886 |
1.667 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
5 |
7 |
no |
no |
PF21736 |
Q6CSU0 |
32-223 |
nD1 |
1-210 |
210 |
e7l20w2 |
7L20 |
212.1.1 |
0.913 |
0.0 |
0.0 |
3.7|4.4|1 |
0.87 |
1.458 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
5 |
7 |
no |
no |
PF21736 |
M3JDE7 |
26-205 |
nD1 |
1-195 |
195 |
e5x9yB2 |
5X9Y |
212.1.1 |
0.9 |
0.0 |
0.0 |
5.1|6.1|1 |
0.93 |
1.354 |
pymol |
more |
good_domain |
a+b two layers |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
Ribosomal protein S5 domain 2-like |
3 |
7 |
no |
no |
PF21739 |
A0A1G5QD16 |
11-163 |
nD2 |
6-40,71-330 |
295 |
e5e33A1 |
5E33 |
2498.1.1 |
0.942 |
0.0 |
0.603 |
8.6|11.3|1 |
0.584 |
1.175 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
10 |
6 |
no |
no |
PF21739 |
A0A497XN17 |
8-160 |
nD1 |
6-345 |
340 |
e4il3B1 |
4IL3 |
2498.1.1 |
0.931 |
0.234 |
0.53 |
3.6|10.9|1 |
0.333 |
1.355 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
12 |
6 |
no |
no |
PF21740 |
A0A370DA63 |
160-341 |
nD1 |
1-343 |
343 |
e5zumB1 |
5ZUM |
2498.1.1 |
0.908 |
0.0 |
0.612 |
10.2|10.2|1 |
0.62 |
1.367 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
12 |
6 |
no |
no |
PF21740 |
A0A7U6GKP6 |
165-346 |
nD1 |
6-350 |
345 |
e5e33A1 |
5E33 |
2498.1.1 |
0.934 |
0.0 |
0.537 |
8.2|11.2|1 |
0.605 |
1.375 |
pymol |
more |
good_domain |
mixed a+b and a/b |
Zincin-like |
Metalloproteases ("zincins") catalytic domain |
Metalloproteases ("zincins") catalytic domain |
11 |
7 |
no |
no |
PF21746 |
A0A2A4CSX2 |
36-142 |
nD1 |
21-150 |
130 |
e1dvpA1 |
1DVP |
109.4.1 |
0.904 |
0.315 |
0.669 |
4.6|6.3|1 |
0.736 |
0.455 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
4 |
1 |
no |
no |
PF21746 |
A0A074TBW1 |
36-142 |
nD1 |
26-150 |
125 |
e5wf2A1 |
5WF2 |
109.4.1 |
0.873 |
0.0 |
0.743 |
4.1|6.3|1 |
0.819 |
0.437 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
5 |
1 |
no |
no |
PF21749 |
S7TNY3 |
5-176 |
nD1 |
6-160,466-478 |
168 |
e3vv4B1 |
3VV4 |
223.1.1 |
0.871 |
0.0 |
0.0 |
5.5|7.4|0 |
0.794 |
1.151 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
5 |
6 |
no |
no |
PF21749 |
E6VTV8 |
5-174 |
nD1 |
6-160 |
155 |
e3hcyB1 |
3HCY |
223.1.1 |
0.855 |
0.0 |
0.0 |
4.9|6.1|0 |
0.813 |
1.062 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
5 |
5 |
no |
no |
PF21751 |
D2R5H4 |
27-126 |
nD1 |
11-170 |
160 |
e7dfxB1 |
7DFX |
4279.1.1 |
0.884 |
0.497 |
0.0 |
7.9|7.9|1 |
0.705 |
1.032 |
pymol |
more |
good_domain |
a+b three layers |
DisA nucleotide-binding domain |
DisA nucleotide-binding domain |
DisA nucleotide-binding domain |
5 |
7 |
no |
no |
PF21752 |
A0A126PD81 |
23-228 |
nD1 |
21-230 |
210 |
e5tjjA1 |
5TJJ |
223.1.1 |
0.857 |
0.0 |
0.0 |
5.0|5.0|1 |
0.758 |
1.438 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
7 |
5 |
no |
no |
PF21752 |
W8F155 |
27-240 |
nD1 |
26-220 |
195 |
e1ysqA1 |
1YSQ |
223.1.1 |
0.918 |
0.0 |
0.0 |
3.6|4.2|1 |
0.769 |
1.336 |
pymol |
more |
good_domain |
a+b three layers |
Profilin-like |
sensor domains |
sensor domains |
5 |
5 |
yes:out |
no |
PF21753 |
A0A6C7E6K2 |
44-196 |
nD1 |
41-200 |
160 |
e3c23B1 |
3C23 |
4279.1.1 |
0.874 |
0.0 |
0.0 |
7.9|8.3|1 |
0.841 |
1.032 |
pymol |
more |
good_domain |
a+b three layers |
DisA nucleotide-binding domain |
DisA nucleotide-binding domain |
DisA nucleotide-binding domain |
5 |
8 |
no |
no |
PF21771 |
A0A433SM35 |
435-736 |
nD7 |
581-770,791-925 |
325 |
e1i84S3 |
1I84 |
3860.1.1 |
0.907 |
0.0 |
0.0 |
3.7|6.5|0 |
0.667 |
4.452 |
pymol |
more |
good_domain |
alpha bundles |
Myosin VI lever arm |
Myosin VI lever arm |
Myosin VI lever arm |
3 |
1 |
no |
no |
PF21772 |
A0A3P8WSI6 |
35-262 |
nD1 |
31-270 |
240 |
e6ntrC1 |
6NTR |
71.2.1 |
0.895 |
0.0 |
0.0 |
13.2|13.2|1 |
0.848 |
1.121 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
4 |
14 |
no |
no |
PF21772 |
A0A3P8XKC6 |
17-238 |
nD1 |
16-245 |
230 |
e6ntrC1 |
6NTR |
71.2.1 |
0.862 |
0.0 |
0.0 |
13.4|13.4|1 |
0.845 |
1.075 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
3 |
14 |
no |
no |
PF21772 |
F7EC34 |
42-271 |
nD1 |
41-280 |
240 |
e6ntrC1 |
6NTR |
71.2.1 |
0.877 |
0.0 |
0.0 |
13.7|13.7|1 |
0.855 |
1.121 |
pymol |
more |
good_domain |
beta meanders |
Lipoprotein localization factors LolAB |
PA1994-like |
PA1994-like |
3 |
14 |
no |
no |
PF21779 |
A0A327KFB8 |
18-103 |
nD1 |
11-105 |
95 |
e6miiD5 |
6MII |
148.1.3 |
0.881 |
0.0 |
0.0 |
3.2|3.2|1 |
0.717 |
1.022 |
pymol |
more |
good_domain |
alpha arrays |
Histone-like |
Histone-related |
AAA+ ATPase lid domain |
3 |
1 |
no |
no |
PF21804 |
A0A2C9CHF0 |
2-563 |
nD2 |
366-445 |
80 |
e6h9xA2 |
6H9X |
192.7.1 |
0.898 |
0.678 |
0.829 |
9.4|9.6|1 |
0.695 |
0.714 |
pymol |
more |
good_domain |
alpha bundles |
Long alpha-hairpin |
tRNA-binding arm |
tRNA-binding arm |
2 |
1 |
no |
yes:out |
PF21814 |
B1WPN8 |
2-114 |
nD1 |
1-115 |
115 |
e1z8mA1 |
1Z8M |
4312.1.1 |
0.861 |
0.0 |
0.0 |
4.2|6.3|1 |
0.869 |
1.271 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
5 |
no |
no |
PF21814 |
K9TMA4 |
2-114 |
nD1 |
1-115 |
115 |
e5ja8C1 |
5JA8 |
4312.1.1 |
0.861 |
0.0 |
0.0 |
4.3|6.4|1 |
0.874 |
1.271 |
pymol |
more |
good_domain |
a+b two layers |
RelE-like |
RelE-like |
RelE-like |
3 |
5 |
no |
no |
PF21818 |
B4VVA4 |
308-441 |
nD2 |
306-440 |
135 |
e2q07A3 |
2Q07 |
7569.1.1 |
0.937 |
0.974 |
0.977 |
9.3|9.3|1 |
0.707 |
0.605 |
pymol |
more |
good_domain |
a/b three-layered sandwiches |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
Uracil-DNA glycosylase-like |
5 |
6 |
no |
no |
PF02432 |
A0A7V7UFW6 |
30-129 |
nD1 |
41-185,216-265 |
195 |
e3gghA1 |
3GGH |
11.1.5 |
0.949 |
1.0 |
1.0 |
9.8|9.8|1 |
0.606 |
1.266 |
pymol |
more |
good_domain |
beta sandwiches |
Immunoglobulin-like beta-sandwich |
Immunoglobulin-related |
Common fold of diphtheria toxin/transcription factors/cytochrome f |
2 |
11 |
yes:out |
no |
PF10879 |
Q9ZE04 |
5-54 |
nD1 |
6-50 |
45 |
e1j5uA2 |
1J5U |
256.1.1 |
0.875 |
0.0 |
0.0 |
4.9|4.9|1 |
0.799 |
0.667 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF10879 |
H6QKZ5 |
6-51 |
nD1 |
6-60 |
55 |
e1j5uA2 |
1J5U |
256.1.1 |
0.866 |
0.0 |
0.0 |
5.0|5.0|1 |
0.799 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF10879 |
D5AW79 |
5-54 |
nD1 |
6-60 |
55 |
e1j5uA2 |
1J5U |
256.1.1 |
0.909 |
0.0 |
0.0 |
5.0|5.0|1 |
0.812 |
0.815 |
pymol |
more |
good_domain |
a+b two layers |
MTH1598-like |
MTH1598-like |
MTH1598-like |
1 |
3 |
no |
no |
PF11996 |
A0A377VS22 |
347-984 |
nD4 |
591-785 |
195 |
e2quaA4 |
2QUA |
207.6.1 |
0.924 |
0.0 |
0.0 |
9.0|9.9|0 |
0.908 |
1.077 |
pymol |
na |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
5 |
15 |
no |
yes:out |
PF11996 |
A0A377XEZ2 |
353-990 |
nD4 |
611-790 |
180 |
e2quaA4 |
2QUA |
207.6.1 |
0.865 |
0.0 |
0.0 |
9.0|11.9|0 |
0.908 |
0.994 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
4 |
14 |
no |
yes:out |
PF11996 |
A0A6D0XRL6 |
1-574 |
nD2 |
181-375 |
195 |
e2quaA4 |
2QUA |
207.6.1 |
0.89 |
0.0 |
0.0 |
8.9|12.8|0 |
0.918 |
1.077 |
pymol |
more |
good_domain |
beta duplicates or obligate multimers |
Single-stranded right-handed beta-helix |
Serralysin-like metalloprotease-C |
Serralysin-like metalloprotease-C |
4 |
15 |
no |
yes:out |
PF15783 |
A0A6A1QF82 |
3-393 |
nD1 |
76-200 |
125 |
e4mo1A2 |
4MO1 |
3759.1.1 |
0.851 |
0.0 |
0.0 |
4.9|4.9|1 |
0.731 |
1.168 |
pymol |
more |
good_domain |
alpha arrays |
Antitermination protein Q helical domain |
Antitermination protein Q helical domain |
Antitermination protein Q helical domain |
5 |
2 |
no |
no |
PF19152 |
Q815Q7 |
1-159 |
nD1 |
6-125 |
120 |
e3tdgA4 |
3TDG |
243.4.1 |
0.886 |
0.0 |
0.0 |
5.9|7.0|0 |
0.925 |
1.967 |
pymol |
more |
good_domain |
a+b two layers |
Cystatin-like |
DsbC/DsbG N-terminal domain-like |
DsbC/DsbG N-terminal domain-like |
3 |
4 |
no |
yes:1 |
PF19175 |
A0A6C0JW25 |
56-254 |
nD1 |
1-65,92-220,316-345 |
224 |
e2mowA1 |
2MOW |
109.4.1 |
0.885 |
0.0 |
0.0 |
4.6|6.1|1 |
0.725 |
0.783 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
8 |
0 |
no |
yes:1 |
PF19175 |
A0A0F8YFD7 |
104-347 |
nD1 |
106-285 |
180 |
e1l5jB1 |
1L5J |
109.4.1 |
0.885 |
0.0 |
0.0 |
4.2|5.3|0 |
0.769 |
0.629 |
pymol |
more |
good_domain |
alpha superhelices |
Repetitive alpha hairpins |
ARM repeat |
ARM repeat |
9 |
0 |
no |
no |
PF19659 |
A0A0F2RWI1 |
4-125 |
nD1 |
46-170 |
125 |
e4d40A1 |
4D40 |
274.1.1 |
0.945 |
0.0 |
0.223 |
5.1|5.4|1 |
0.87 |
1.016 |
pymol |
more |
good_domain |
a+b two layers |
Pili subunits |
Pili subunits |
Pili subunits |
4 |
5 |
no |
yes:out |
PF20323 |
A0A2N2DJI3 |
39-97 |
nD1 |
1-103 |
103 |
e4o56A2 |
4O56 |
292.2.1 |
0.856 |
0.0 |
0.0 |
4.9|4.9|1 |
0.818 |
0.932 |
pymol |
more |
good_domain |
a+b two layers |
RIP/Polo-box domain |
Polo-box domain |
Polo-box domain |
3 |
5 |
no |
no |