T0447

X-ray Targets
387 388 389 390
391 392 393 394
395 396 397 398
399 400 401 402
403 404 405 406
407 408 409 410
411 412 413 414
415 416 417 418
419 420 421 422
423 424 425 426
427 428 429 430
431 432 433 434
435 436 438 439
440 441 442 443
444 445 446 447
448 449 450 451
452 453 454 455
456 457 458 459
461 463 465 470
477 478 479 481
483 485 486 487
488 489 490 491
493 494 495 496
497 501 502 503
504 505 506 507
508 509 510 511
512 513 514

T0447

formate--tetrahydrofolate ligase (TM1766) from Thermotoga maritima

Target type: Server only

Target sequence:

>T0447 TM1766, Formate--tetrahydrofolate ligase, Thermotoga maritima, 542 residues
MKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLNRIGKKSIVTLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGNELKIDITRVFWKRTMDMNDRALRSIVIGLGGSANGFPREDSFIITAASEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDAINPNLVQTTEGTPALIHCGPFANIAHGTNSIIATKMAMKLSEYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATVRALKYHGGANLKNIHEENLEALKEGFKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVSEVFKKGSEGGVELAKAVAEAAKDVEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVDDSGNIVGVS

Structure:
Method: X-ray, res=1.85Å, R/Rfree=0.16/0.20
Determined by: JCSG
PDB ID: 3do6

PyMOL of 3do6

Domains:  PyMOL of domains

Three domains. Residue ranges in PDB: 0-117,239-422; 118-238 and 423-516. Residue ranges in target: 1-117,239-422; 118-238 and 423-516.

To compute the weighted sum, GDT-TS for each domain was multiplied by the domain length, and this sum was divided by the sum of domain lengths. Each point represents first server model. Green, gray and black points are top 10, bottom 25% and the rest of prediction models. Blue line is the best-fit slope line (intersection 0) to the top 10 server models. Red line is the diagonal. Slope and root mean square y-x distance for the top 10 models (average difference between the weighted sum of domain GDT-TS scores and the whole chain GDT-TS score) are shown above the plot.

Structure classification:

P-loop-containing nucleoside triphosphate hydrolase fold, with two domains inserted.

CASP category:

Whole chain: Comparative modeling:easy.

1st domain: Comparative modeling:easy. 2nd domain: Comparative modeling:easy. 3rd domain: Comparative modeling:easy.

Closest templates:

1eg7.

Target sequence - PDB file inconsistencies:

T0447    3do6.pdb    T0447.pdb    PyMOL    PyMOL of domains   

T0447    1 -MKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLNRIGKKSIVTLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGNELKIDITRVFWKRTMDMNDRALRSIVIGLGGSANGFPREDSFIITAASEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDAINPNLVQTTEGTPALIHCGPFANIAHGTNSIIATKMAMKLSEYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATVRALKYHGGANLKNIHEENLEALKEGFKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVSEVFKKGSEGGVELAKAVAEAAKDVEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVDDSGNIVGVS 542
           ~||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3do6A    0 GMKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLNRIGKKSIVTLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGNELKIDITRVFWKRTMDMNDRALRSIVIGLGGSANGFPREDSFIITAASEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDAINPNLVQTTEGTPALIHCGPFANIAHGTNSIIATKMAMKLSEYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATVRALKYHGGANLKNIHEENLEALKEGFKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVSEVFKKGSEGGVELAKAVAEAAKDVEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVDDSGNIVGVS 542

Residue change log: change 1, 68, 118, 155, 157, 191, 200, 232, 275, 277, 426, 518, 530, MSE to MET; remove 0 G as it is not present in target sequence;

We suggest to evaluate this target as a single domain spanning whole chain. However, evolutionarily this is a 3-domain protein:

1st domain: target 1-117, 239-422 ; pdb 1-117, 239-422

2nd domain: target 118-238 ; pdb 118-238

3rd domain: target 423-516 ; pdb 423-516

Sequence classification:

Formate--tetrahydrofolate ligase (FTHFS) in Pfam.

Server predictions:

T0447:pdb 1-542:seq 1-542:CM_easy;   alignment

447_1:pdb 1-117,239-422:seq 1-117,239-422:CM_easy;   alignment

447_2:pdb 118-238:seq 118-238:CM_easy;   alignment

447_3:pdb 423-516:seq 423-516:CM_easy;   alignment

click on a score in the table below to display the model in PyMOL

# GROUP ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ ↓ GROUP #
T0447 447_1 447_2 447_3 T0447 447_1 447_2 447_3 T0447 447_1 447_2 447_3 T0447 447_1 447_2 447_3
First score First Z-score Best score Best Z-score
1 PSI 89.58 83.00 86.85 93.36 80.40 89.50 98.76 97.80 95.90 88.83 82.98 77.95 1.86 0.91 0.82 1.31 -0.19 1.04 -1.34 -1.30 -0.36 0.58 -0.44 0.42 89.58 83.00 86.85 93.36 80.40 89.50 98.76 97.80 95.90 88.83 82.98 77.95 1.49 0.46 0.39 1.01 -1.00 0.64 -2.27 -1.74 -1.30 0.08 -0.86 0.23 PSI 1
2 COMA−M 89.53 81.23 87.82 93.19 83.83 90.19 98.97 98.00 96.17 88.83 83.69 78.02 1.80 0.05 1.50 1.19 0.48 1.35 -0.65 -0.67 0.08 0.58 0.43 0.53 89.53 83.93 87.82 93.19 83.83 90.19 99.17 98.21 96.51 88.83 83.78 78.17 1.43 0.96 1.07 0.88 -0.20 0.94 -0.52 -0.54 0.43 0.08 -0.02 0.61 COMA−M 2
3 SAM−T02−server 89.34 83.84 88.05 93.36 89.53 91.39 99.17 98.21 96.34 88.83 82.62 77.99 1.57 1.33 1.67 1.31 1.61 1.88 0.01 -0.00 0.35 0.58 -0.88 0.48 89.34 83.84 88.05 93.36 89.53 91.39 99.59 98.35 96.34 89.36 85.64 77.99 1.18 0.91 1.23 1.01 1.12 1.45 1.27 -0.12 -0.05 1.25 1.93 0.30 SAM−T02−server 3
4 MUSTER 89.07 79.00 86.39 92.77 73.64 87.87 99.59 98.90 96.81 89.36 84.57 77.91 1.25 -1.04 0.49 0.88 -1.53 0.32 1.41 2.18 1.10 1.65 1.50 0.37 89.07 79.00 86.39 92.77 86.38 87.87 99.59 98.90 96.81 89.36 85.11 78.30 0.82 -1.68 0.07 0.54 0.39 -0.06 1.27 1.50 1.28 1.25 1.38 0.84 MUSTER 4
5 fais−server 88.98 83.59 87.71 93.11 87.85 90.13 99.17 97.93 96.31 88.56 83.42 78.06 1.15 1.20 1.43 1.13 1.27 1.32 0.01 -0.89 0.30 0.03 0.10 0.58 88.98 83.59 87.71 93.11 87.85 90.13 99.59 98.35 96.31 88.83 84.22 78.06 0.71 0.77 1.00 0.81 0.73 0.91 1.27 -0.12 -0.14 0.08 0.44 0.42 fais−server 5
6 FFASsuboptimal 88.88 83.29 86.86 92.53 76.11 89.29 99.17 98.21 96.34 88.83 82.62 77.99 1.03 1.06 0.83 0.70 -1.04 0.95 0.01 -0.00 0.35 0.58 -0.88 0.48 88.88 83.29 86.86 92.53 87.40 89.29 99.17 98.21 96.34 88.83 82.62 77.99 0.57 0.61 0.40 0.35 0.63 0.55 -0.52 -0.54 -0.05 0.08 -1.23 0.30 FFASsuboptimal 6
7 mGenTHREADER 88.84 83.36 86.88 92.44 88.68 89.32 99.17 98.21 96.34 88.83 82.62 77.99 0.98 1.09 0.84 0.63 1.44 0.96 0.01 -0.00 0.35 0.58 -0.88 0.48 88.84 83.36 86.88 92.44 88.68 89.32 99.17 98.21 96.34 88.83 82.62 77.99 0.52 0.65 0.41 0.28 0.92 0.56 -0.52 -0.54 -0.05 0.08 -1.23 0.30 mGenTHREADER 7
8 RAPTOR 88.84 83.00 87.86 93.27 78.93 90.31 99.38 98.14 96.23 88.03 82.89 78.13 0.98 0.91 1.53 1.24 -0.48 1.40 0.71 -0.22 0.17 -1.05 -0.55 0.69 89.21 84.96 87.86 93.27 87.40 90.31 99.59 98.35 96.42 89.36 84.93 78.20 1.01 1.51 1.10 0.94 0.63 0.99 1.27 -0.12 0.18 1.25 1.19 0.67 RAPTOR 8
9 MULTICOM−CLUSTER 88.75 84.19 86.78 92.36 76.66 88.35 99.17 98.21 96.45 88.30 81.74 78.04 0.88 1.50 0.77 0.57 -0.93 0.53 0.01 -0.00 0.52 -0.50 -1.95 0.55 88.75 84.19 86.78 92.53 83.31 88.35 99.59 98.69 96.68 89.36 84.57 78.04 0.40 1.10 0.34 0.35 -0.32 0.15 1.27 0.88 0.91 1.25 0.81 0.38 MULTICOM−CLUSTER 9
10 COMA 88.75 83.24 87.74 93.19 75.89 90.08 99.17 97.93 96.32 88.03 82.71 78.04 0.88 1.03 1.45 1.19 -1.08 1.30 0.01 -0.89 0.32 -1.05 -0.77 0.55 88.75 83.24 87.82 93.19 75.89 90.19 99.17 97.93 96.53 88.30 83.16 78.17 0.40 0.59 1.07 0.88 -2.04 0.94 -0.52 -1.36 0.49 -1.09 -0.67 0.61 COMA 10
11 Zhang−Server 88.75 83.09 87.60 92.53 81.51 89.66 99.59 98.62 96.59 89.36 84.22 78.18 0.88 0.96 1.35 0.70 0.03 1.11 1.41 1.29 0.75 1.65 1.07 0.76 89.07 83.21 88.12 92.86 85.27 90.14 99.79 99.79 96.77 90.16 84.66 78.60 0.82 0.57 1.28 0.61 0.13 0.91 2.12 4.12 1.17 3.01 0.90 1.37 Zhang−Server 11
12 Pcons_local 88.65 81.69 85.80 92.11 87.13 87.53 98.97 98.28 96.18 88.56 83.07 78.09 0.76 0.27 0.08 0.39 1.13 0.17 -0.65 0.22 0.09 0.03 -0.33 0.63 88.65 83.86 85.80 92.28 87.13 87.53 99.38 98.69 96.66 88.56 83.25 78.09 0.27 0.92 -0.34 0.15 0.56 -0.21 0.37 0.88 0.86 -0.52 -0.57 0.47 Pcons_local 12
13 Pcons_dot_net 88.65 81.69 85.80 92.11 87.13 87.53 98.97 98.28 96.18 88.56 83.07 78.09 0.76 0.27 0.08 0.39 1.13 0.17 -0.65 0.22 0.09 0.03 -0.33 0.63 88.98 83.43 87.55 93.11 88.34 90.56 99.17 98.48 96.66 89.36 85.28 78.09 0.71 0.69 0.88 0.81 0.84 1.10 -0.52 0.26 0.86 1.25 1.55 0.47 Pcons_dot_net 13
14 Pcons_multi 88.65 81.69 85.80 92.11 87.13 87.53 98.97 98.28 96.18 88.56 83.07 78.09 0.76 0.27 0.08 0.39 1.13 0.17 -0.65 0.22 0.09 0.03 -0.33 0.63 88.88 82.49 87.25 92.11 87.13 89.31 99.17 98.28 96.36 88.56 83.78 78.14 0.57 0.19 0.67 0.01 0.56 0.56 -0.52 -0.33 0.01 -0.52 -0.02 0.56 Pcons_multi 14
15 FAMSD 88.56 83.46 85.30 91.53 85.77 86.90 99.38 98.42 96.12 88.56 84.49 77.11 0.65 1.14 -0.28 -0.04 0.86 -0.11 0.71 0.66 -0.00 0.03 1.40 -0.80 88.56 83.46 85.30 91.53 86.46 86.90 99.59 98.62 96.20 89.89 85.46 77.81 0.15 0.70 -0.69 -0.45 0.41 -0.48 1.27 0.67 -0.45 2.41 1.74 -0.02 FAMSD 15
16 PS2−server 88.56 82.41 86.11 92.03 78.90 87.33 99.17 98.21 96.52 88.83 83.69 78.00 0.65 0.63 0.30 0.33 -0.49 0.08 0.01 -0.00 0.64 0.58 0.43 0.50 88.56 82.41 86.11 92.03 78.90 87.33 99.17 98.21 96.52 88.83 83.69 78.00 0.15 0.14 -0.13 -0.05 -1.35 -0.29 -0.52 -0.54 0.46 0.08 -0.11 0.31 PS2−server 16
17 Phyre_de_novo 88.56 80.50 86.54 92.53 82.28 88.08 99.17 98.48 95.96 88.30 82.80 78.13 0.65 -0.31 0.60 0.70 0.18 0.41 0.01 0.85 -0.26 -0.50 -0.66 0.69 88.56 80.67 86.54 92.53 84.99 88.08 99.17 98.48 96.34 88.83 82.80 78.13 0.15 -0.79 0.18 0.35 0.07 0.03 -0.52 0.26 -0.05 0.08 -1.04 0.54 Phyre_de_novo 17
18 FEIG 88.52 83.38 87.10 92.28 85.69 88.88 99.17 98.21 96.40 88.56 83.07 77.97 0.61 1.10 0.99 0.51 0.85 0.77 0.01 -0.00 0.44 0.03 -0.33 0.45 88.52 83.38 87.10 92.28 85.69 88.88 99.17 98.21 96.40 88.56 83.07 77.97 0.10 0.66 0.57 0.15 0.23 0.37 -0.52 -0.54 0.12 -0.52 -0.76 0.26 FEIG 18
19 MUProt 88.52 81.60 86.35 92.28 88.01 87.48 99.38 98.14 96.59 88.56 82.71 78.12 0.61 0.23 0.47 0.51 1.31 0.15 0.71 -0.22 0.75 0.03 -0.77 0.67 88.52 81.63 86.35 92.61 88.01 87.48 99.38 98.42 96.59 88.83 82.71 78.12 0.10 -0.27 0.04 0.41 0.77 -0.23 0.37 0.08 0.66 0.08 -1.14 0.52 MUProt 19
20 keasar−server 88.52 80.44 86.07 91.44 78.54 86.76 99.79 98.83 96.27 89.36 86.70 78.52 0.61 -0.34 0.27 -0.11 -0.56 -0.17 2.07 1.95 0.24 1.65 4.09 1.26 89.21 84.66 88.66 93.02 83.64 90.79 99.79 98.90 97.24 89.63 86.70 78.74 1.01 1.35 1.66 0.74 -0.25 1.19 2.12 1.50 2.50 1.84 3.04 1.62 keasar−server 20
21 3D−JIGSAW_V3 88.52 77.57 86.60 91.94 87.57 88.61 99.59 98.90 97.20 88.83 85.11 77.06 0.61 -1.74 0.64 0.26 1.22 0.65 1.41 2.18 1.72 0.58 2.15 -0.88 88.52 83.04 86.60 91.94 87.57 88.61 99.59 98.90 97.20 88.83 85.11 77.06 0.10 0.48 0.22 -0.12 0.67 0.26 1.27 1.50 2.39 0.08 1.38 -1.34 3D−JIGSAW_V3 21
22 MULTICOM−CMFR 88.47 75.68 86.26 92.28 79.15 87.04 99.38 98.69 96.69 88.83 84.04 78.06 0.55 -2.66 0.40 0.51 -0.44 -0.05 0.71 1.51 0.91 0.58 0.85 0.58 88.70 82.93 86.32 92.61 90.06 87.51 99.59 98.69 96.69 89.10 84.04 78.20 0.34 0.42 0.02 0.41 1.24 -0.22 1.27 0.88 0.94 0.67 0.25 0.67 MULTICOM−CMFR 22
23 nFOLD3 88.42 82.95 85.98 91.94 75.31 87.74 99.17 98.21 96.34 88.83 82.62 77.99 0.49 0.89 0.20 0.26 -1.20 0.26 0.01 -0.00 0.35 0.58 -0.88 0.48 88.88 83.26 86.18 92.53 81.45 87.74 99.38 98.69 96.34 88.83 82.62 77.99 0.57 0.60 -0.08 0.35 -0.75 -0.12 0.37 0.88 -0.05 0.08 -1.23 0.30 nFOLD3 23
24 ACOMPMOD 88.38 81.98 85.21 91.53 87.60 86.83 99.38 98.14 95.53 89.36 85.28 78.08 0.44 0.42 -0.34 -0.04 1.23 -0.14 0.71 -0.22 -0.95 1.65 2.36 0.61 88.61 83.13 85.38 91.69 87.60 86.83 99.38 98.14 96.61 89.36 85.28 78.08 0.22 0.53 -0.64 -0.32 0.67 -0.51 0.37 -0.74 0.71 1.25 1.55 0.45 ACOMPMOD 24
25 pro−sp3−TASSER 88.38 80.29 86.34 91.94 81.37 87.63 99.17 98.21 96.35 88.83 83.69 78.01 0.44 -0.41 0.46 0.26 -0.00 0.21 0.01 -0.00 0.36 0.58 0.43 0.51 89.39 80.29 88.50 93.44 89.01 91.52 99.38 99.38 96.36 89.10 84.84 78.02 1.24 -0.99 1.55 1.08 1.00 1.51 0.37 2.91 0.01 0.67 1.09 0.35 pro−sp3−TASSER 25
26 HHpred2 88.33 82.92 86.73 92.28 77.10 88.31 99.17 98.21 96.55 88.30 82.80 77.84 0.38 0.88 0.73 0.51 -0.84 0.52 0.01 -0.00 0.68 -0.50 -0.66 0.26 88.33 82.92 86.73 92.28 77.10 88.31 99.17 98.21 96.55 88.30 82.80 77.84 -0.15 0.42 0.31 0.15 -1.76 0.13 -0.52 -0.54 0.54 -1.09 -1.04 0.03 HHpred2 26
27 HHpred4 88.33 79.27 86.18 92.11 85.63 87.37 99.17 98.21 96.46 88.83 83.69 77.90 0.38 -0.91 0.35 0.39 0.84 0.10 0.01 -0.00 0.54 0.58 0.43 0.35 88.33 79.27 86.18 92.11 85.63 87.37 99.17 98.21 96.46 88.83 83.69 77.90 -0.15 -1.54 -0.08 0.01 0.22 -0.28 -0.52 -0.54 0.29 0.08 -0.11 0.14 HHpred4 27
28 HHpred5 88.33 79.27 86.18 92.11 85.63 87.37 99.17 98.21 96.46 88.83 83.69 77.90 0.38 -0.91 0.35 0.39 0.84 0.10 0.01 -0.00 0.54 0.58 0.43 0.35 88.33 79.27 86.18 92.11 85.63 87.37 99.17 98.21 96.46 88.83 83.69 77.90 -0.15 -1.54 -0.08 0.01 0.22 -0.28 -0.52 -0.54 0.29 0.08 -0.11 0.14 HHpred5 28
29 pipe_int 88.33 78.18 86.04 91.53 74.83 86.93 99.17 98.21 96.34 88.83 82.62 77.99 0.38 -1.44 0.25 -0.04 -1.29 -0.10 0.01 -0.00 0.35 0.58 -0.88 0.48 88.33 82.59 86.06 91.53 84.94 86.93 99.17 98.21 96.34 88.83 82.62 77.99 -0.15 0.24 -0.16 -0.45 0.06 -0.47 -0.52 -0.54 -0.05 0.08 -1.23 0.30 pipe_int 29
30 3DShot2 88.28 82.75 86.12 91.86 86.16 87.98 99.17 98.21 96.42 88.83 83.69 78.03 0.32 0.79 0.30 0.20 0.94 0.37 0.01 -0.00 0.48 0.58 0.43 0.54 88.28 82.75 86.12 91.86 86.16 87.98 99.17 98.21 96.42 88.83 83.69 78.03 -0.21 0.32 -0.12 -0.19 0.34 -0.01 -0.52 -0.54 0.18 0.08 -0.11 0.37 3DShot2 30
31 MULTICOM−RANK 88.24 80.80 86.27 91.94 83.31 87.48 99.17 98.21 96.51 88.83 83.33 78.03 0.28 -0.16 0.41 0.26 0.38 0.15 0.01 -0.00 0.62 0.58 -0.01 0.54 88.84 80.80 86.32 92.28 85.02 87.48 99.38 98.69 96.52 88.83 84.40 78.03 0.52 -0.72 0.02 0.15 0.07 -0.23 0.37 0.88 0.46 0.08 0.63 0.37 MULTICOM−RANK 31
32 LOOPP_Server 88.15 79.07 84.41 91.53 80.26 85.79 98.97 98.00 95.47 88.30 84.22 77.54 0.17 -1.00 -0.90 -0.04 -0.22 -0.60 -0.65 -0.67 -1.04 -0.50 1.07 -0.17 89.16 83.50 87.17 93.19 88.26 90.54 99.17 98.21 95.85 88.30 84.22 77.54 0.94 0.73 0.62 0.88 0.83 1.09 -0.52 -0.54 -1.44 -1.09 0.44 -0.50 LOOPP_Server 32
33 FFASflextemplate 88.10 82.47 85.49 91.36 74.00 86.88 99.17 98.21 96.34 88.83 82.62 77.99 0.11 0.66 -0.14 -0.17 -1.45 -0.12 0.01 -0.00 0.35 0.58 -0.88 0.48 88.10 82.47 85.76 92.44 87.62 87.39 99.17 98.21 96.44 88.83 83.16 78.03 -0.45 0.17 -0.37 0.28 0.68 -0.27 -0.52 -0.54 0.23 0.08 -0.67 0.37 FFASflextemplate 33
34 FFASstandard 88.10 81.69 85.76 92.44 87.62 87.39 99.17 98.21 96.44 88.30 83.16 78.03 0.11 0.27 0.05 0.63 1.23 0.11 0.01 -0.00 0.51 -0.50 -0.22 0.54 88.10 82.47 85.76 92.44 87.62 87.39 99.17 98.21 96.44 88.83 83.16 78.03 -0.45 0.17 -0.37 0.28 0.68 -0.27 -0.52 -0.54 0.23 0.08 -0.67 0.37 FFASstandard 34
35 Poing 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 0.05 -0.22 -0.16 -0.29 0.71 -0.45 0.01 -0.00 0.35 0.58 -0.88 0.48 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 -0.51 -0.79 -0.57 -0.72 0.07 -0.80 -0.52 -0.54 -0.05 0.08 -1.23 0.30 Poing 35
36 Phyre2 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 0.05 -0.22 -0.16 -0.29 0.71 -0.45 0.01 -0.00 0.35 0.58 -0.88 0.48 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 -0.51 -0.79 -0.57 -0.72 0.07 -0.80 -0.52 -0.54 -0.05 0.08 -1.23 0.30 Phyre2 36
37 Phragment 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 0.05 -0.22 -0.16 -0.29 0.71 -0.45 0.01 -0.00 0.35 0.58 -0.88 0.48 88.05 80.67 85.47 91.20 84.99 86.14 99.17 98.21 96.34 88.83 82.62 77.99 -0.51 -0.79 -0.57 -0.72 0.07 -0.80 -0.52 -0.54 -0.05 0.08 -1.23 0.30 Phragment 37
38 Fiser−M4T 88.01 81.55 86.22 92.28 82.97 88.20 98.97 98.28 96.47 88.56 83.07 78.04 0.00 0.21 0.37 0.51 0.31 0.47 -0.65 0.22 0.56 0.03 -0.33 0.55 88.01 81.55 86.22 92.28 82.97 88.20 98.97 98.28 96.47 88.56 83.07 78.04 -0.57 -0.32 -0.05 0.15 -0.40 0.08 -1.38 -0.33 0.32 -0.52 -0.76 0.38 Fiser−M4T 38
39 FUGUE_KM 87.96 82.92 84.90 91.28 85.52 86.51 99.59 98.35 94.92 89.36 85.64 77.87 -0.06 0.88 -0.56 -0.23 0.82 -0.28 1.41 0.44 -1.92 1.65 2.80 0.31 88.19 82.92 85.15 91.53 85.52 86.51 99.59 98.35 96.34 89.36 85.64 77.99 -0.33 0.42 -0.80 -0.45 0.19 -0.65 1.27 -0.12 -0.05 1.25 1.93 0.30 FUGUE_KM 39
40 YASARA 87.96 82.78 87.73 93.61 88.40 91.12 98.76 97.25 96.22 85.90 84.13 75.62 -0.06 0.81 1.44 1.50 1.38 1.76 -1.34 -3.03 0.16 -5.37 0.96 -2.98 89.48 84.46 88.27 93.61 90.97 92.21 99.38 98.69 96.80 86.97 85.19 75.62 1.36 1.24 1.39 1.21 1.45 1.80 0.37 0.88 1.25 -4.02 1.46 -3.88 YASARA 40
41 Pushchino 87.92 82.47 85.22 91.11 74.75 86.63 99.17 98.21 96.34 88.83 82.62 77.99 -0.10 0.66 -0.33 -0.35 -1.31 -0.23 0.01 -0.00 0.35 0.58 -0.88 0.48 87.92 82.47 85.22 91.11 74.75 86.63 99.17 98.21 96.34 88.83 82.62 77.99 -0.69 0.17 -0.75 -0.79 -2.31 -0.59 -0.52 -0.54 -0.05 0.08 -1.23 0.30 Pushchino 41
42 GS−KudlatyPred 87.92 82.44 86.03 92.44 74.53 87.25 99.17 98.48 96.20 88.30 83.16 78.08 -0.10 0.64 0.24 0.63 -1.35 0.04 0.01 0.85 0.12 -0.50 -0.22 0.61 87.92 82.44 86.03 92.44 74.53 87.25 99.17 98.48 96.20 88.30 83.16 78.08 -0.69 0.16 -0.18 0.28 -2.36 -0.33 -0.52 0.26 -0.45 -1.09 -0.67 0.45 GS−KudlatyPred 42
43 MULTICOM−REFINE 87.87 80.52 86.31 92.44 83.53 87.43 99.59 98.35 96.36 89.10 83.95 78.20 -0.16 -0.30 0.44 0.63 0.42 0.12 1.41 0.44 0.38 1.13 0.74 0.79 88.65 81.46 86.44 92.69 83.53 87.53 99.59 98.42 96.71 89.10 83.95 78.20 0.27 -0.37 0.11 0.48 -0.27 -0.21 1.27 0.08 1.00 0.67 0.16 0.67 MULTICOM−REFINE 43
44 BioSerf 87.78 82.27 85.48 91.69 80.45 86.75 98.97 98.28 95.99 87.77 82.98 77.34 -0.27 0.56 -0.15 0.08 -0.18 -0.18 -0.65 0.22 -0.21 -1.58 -0.44 -0.47 87.78 82.27 85.48 91.69 80.45 86.75 98.97 98.28 95.99 87.77 82.98 77.34 -0.87 0.07 -0.57 -0.32 -0.99 -0.54 -1.38 -0.33 -1.04 -2.26 -0.86 -0.85 BioSerf 44
45 forecast 87.73 76.61 83.43 89.62 83.86 83.14 99.38 98.42 96.12 88.03 82.53 76.51 -0.33 -2.21 -1.60 -1.45 0.49 -1.78 0.71 0.66 -0.00 -1.05 -0.99 -1.68 87.73 76.61 83.43 90.03 85.30 83.14 99.38 98.42 96.12 88.30 84.22 76.52 -0.93 -2.96 -2.00 -1.65 0.14 -2.09 0.37 0.08 -0.67 -1.09 0.44 -2.29 forecast 45
46 3Dpro 87.69 77.71 84.69 91.44 72.45 85.73 99.38 98.14 95.45 89.10 85.02 77.34 -0.37 -1.67 -0.71 -0.11 -1.76 -0.63 0.71 -0.22 -1.08 1.13 2.05 -0.47 87.78 82.83 84.80 91.44 81.31 85.84 99.38 98.42 95.51 89.10 85.02 77.62 -0.87 0.37 -1.04 -0.52 -0.79 -0.93 0.37 0.08 -2.40 0.67 1.28 -0.36 3Dpro 46
47 BAKER−ROBETTA 87.50 82.03 84.44 90.36 85.77 85.53 99.38 97.59 95.35 88.83 83.86 76.13 -0.60 0.44 -0.88 -0.91 0.86 -0.72 0.71 -1.96 -1.24 0.58 0.63 -2.23 88.33 83.23 86.35 91.78 87.71 89.42 99.38 97.59 95.35 88.83 84.13 76.13 -0.15 0.58 0.04 -0.25 0.70 0.61 0.37 -2.36 -2.86 0.08 0.35 -2.98 BAKER−ROBETTA 47
48 GS−MetaServer2 87.50 76.00 84.94 90.70 79.37 85.71 98.76 97.80 96.44 87.77 81.21 75.99 -0.60 -2.50 -0.53 -0.66 -0.40 -0.64 -1.34 -1.30 0.51 -1.58 -2.59 -2.44 87.50 76.00 84.94 90.70 79.37 85.71 98.76 97.80 96.44 87.77 81.21 75.99 -1.24 -3.29 -0.95 -1.12 -1.24 -0.99 -2.27 -1.74 0.23 -2.26 -2.71 -3.22 GS−MetaServer2 48
49 GeneSilicoMetaServer 87.50 76.00 84.94 90.70 79.37 85.71 98.76 97.80 96.44 87.77 81.21 75.99 -0.60 -2.50 -0.53 -0.66 -0.40 -0.64 -1.34 -1.30 0.51 -1.58 -2.59 -2.44 87.50 76.00 84.94 90.70 79.37 85.71 98.76 97.80 96.44 87.77 81.21 75.99 -1.24 -3.29 -0.95 -1.12 -1.24 -0.99 -2.27 -1.74 0.23 -2.26 -2.71 -3.22 GeneSilicoMetaServer 49
50 circle 87.45 83.00 84.18 90.78 69.68 85.05 99.38 98.69 95.58 87.50 83.07 75.78 -0.66 0.91 -1.07 -0.60 -2.31 -0.93 0.71 1.51 -0.87 -2.12 -0.33 -2.74 89.39 83.30 87.83 93.94 88.84 91.39 99.38 98.69 95.68 89.10 84.22 77.83 1.24 0.62 1.08 1.48 0.96 1.45 0.37 0.88 -1.92 0.67 0.44 0.01 circle 50
51 huber−torda−server 87.45 82.04 84.34 90.61 74.20 85.09 99.17 98.21 96.34 88.83 82.62 77.99 -0.66 0.45 -0.95 -0.72 -1.41 -0.91 0.01 -0.00 0.35 0.58 -0.88 0.48 87.45 82.04 84.34 90.61 74.20 85.09 99.17 98.21 96.34 88.83 82.62 77.99 -1.30 -0.06 -1.37 -1.19 -2.44 -1.26 -0.52 -0.54 -0.05 0.08 -1.23 0.30 huber−torda−server 51
52 SAM−T06−server 87.45 81.46 88.08 93.19 88.21 92.38 99.38 98.55 95.86 88.83 83.69 77.89 -0.66 0.16 1.69 1.19 1.35 2.32 0.71 1.07 -0.42 0.58 0.43 0.34 88.98 83.62 88.08 93.19 89.31 92.38 99.38 98.55 96.34 88.83 83.69 77.99 0.71 0.79 1.25 0.88 1.07 1.88 0.37 0.46 -0.05 0.08 -0.11 0.30 SAM−T06−server 52
53 panther_server 87.36 81.52 82.81 89.62 80.70 83.57 98.14 97.45 91.69 88.03 83.95 76.29 -0.76 0.19 -2.03 -1.45 -0.13 -1.59 -3.40 -2.40 -7.09 -1.05 0.74 -2.00 87.36 81.52 82.91 90.78 86.30 84.53 98.55 97.59 92.77 88.03 83.95 76.29 -1.42 -0.33 -2.37 -1.05 0.37 -1.50 -3.17 -2.36 -10.17 -1.69 0.16 -2.70 panther_server 53
54 METATASSER 86.72 80.75 82.00 90.28 83.25 83.02 97.93 97.52 92.76 88.56 83.95 75.73 -1.52 -0.18 -2.61 -0.97 0.37 -1.83 -4.09 -2.18 -5.38 0.03 0.74 -2.82 88.05 82.53 86.14 92.19 83.61 87.18 99.38 98.83 96.39 88.83 84.31 78.47 -0.51 0.21 -0.10 0.08 -0.25 -0.36 0.37 1.29 0.09 0.08 0.54 1.14 METATASSER 54
55 FALCON_CONSENSUS 86.67 83.32 85.18 91.36 84.99 88.40 99.17 98.21 96.25 87.50 83.42 77.77 -1.58 1.07 -0.36 -0.17 0.71 0.55 0.01 -0.00 0.20 -2.12 0.10 0.16 89.53 84.27 88.87 94.35 90.92 92.27 99.38 98.69 96.38 89.10 84.31 78.12 1.43 1.14 1.81 1.81 1.44 1.83 0.37 0.88 0.06 0.67 0.54 0.52 FALCON_CONSENSUS 55
56 FALCON 86.67 83.32 85.18 91.36 84.99 88.40 99.17 98.21 96.25 87.50 83.42 77.77 -1.58 1.07 -0.36 -0.17 0.71 0.55 0.01 -0.00 0.20 -2.12 0.10 0.16 89.53 84.27 88.87 94.35 90.92 92.27 99.38 98.69 96.38 89.10 84.31 78.12 1.43 1.14 1.81 1.81 1.44 1.83 0.37 0.88 0.06 0.67 0.54 0.52 FALCON 56
57 CpHModels 86.44 77.08 82.56 88.62 74.42 83.17 97.93 96.56 94.42 87.77 84.22 77.74 -1.85 -1.98 -2.21 -2.19 -1.37 -1.77 -4.09 -5.21 -2.72 -1.58 1.07 0.12 86.44 77.08 82.56 88.62 74.42 83.17 97.93 96.56 94.42 87.77 84.22 77.74 -2.63 -2.71 -2.61 -2.78 -2.39 -2.08 -5.82 -5.39 -5.49 -2.26 0.44 -0.14 CpHModels 57
58 SAM−T08−server 86.12 79.52 87.10 92.36 83.19 91.74 88.43 87.19 89.58 89.10 83.60 77.72 -2.22 -0.79 0.99 0.57 0.36 2.04 -35.54 -34.79 -10.47 1.13 0.32 0.09 89.58 83.95 88.58 93.69 89.70 91.74 99.17 98.21 96.34 89.10 83.60 77.99 1.49 0.97 1.60 1.28 1.16 1.60 -0.52 -0.54 -0.05 0.67 -0.21 0.30 SAM−T08−server 58
59 LEE−SERVER 85.89 77.26 83.02 87.21 71.40 81.67 99.79 98.83 96.92 88.56 83.07 77.68 -2.50 -1.89 -1.89 -3.24 -1.97 -2.43 2.07 1.95 1.28 0.03 -0.33 0.03 88.15 81.06 86.64 92.11 90.12 87.88 99.79 98.90 96.94 89.10 84.75 77.71 -0.38 -0.58 0.25 0.01 1.26 -0.06 2.12 1.50 1.65 0.67 1.00 -0.20 LEE−SERVER 59
60 MUFOLD−MD 85.75 80.46 82.87 87.46 73.20 81.72 99.17 98.21 96.33 88.56 83.42 78.02 -2.66 -0.33 -1.99 -3.05 -1.61 -2.41 0.01 -0.00 0.33 0.03 0.10 0.53 86.58 81.01 83.79 88.45 82.20 83.63 99.17 98.48 96.37 88.83 83.69 78.03 -2.44 -0.61 -1.75 -2.92 -0.58 -1.88 -0.52 0.26 0.03 0.08 -0.11 0.37 MUFOLD−MD 60
61 MUFOLD−Server 85.66 79.97 82.49 87.38 73.39 81.54 99.17 98.48 96.35 88.03 82.89 77.59 -2.77 -0.57 -2.26 -3.11 -1.57 -2.49 0.01 0.85 0.36 -1.05 -0.55 -0.10 85.79 80.46 82.87 87.62 73.45 81.72 99.17 98.48 96.36 88.56 83.42 78.02 -3.48 -0.90 -2.39 -3.58 -2.61 -2.70 -0.52 0.26 0.01 -0.52 -0.40 0.35 MUFOLD−Server 61
62 rehtnap 84.46 79.91 80.37 86.21 75.36 79.16 98.97 97.73 94.99 87.23 82.45 75.82 -4.18 -0.59 -3.76 -3.98 -1.19 -3.54 -0.65 -1.52 -1.81 -2.67 -1.08 -2.69 84.46 79.91 80.40 86.21 81.84 79.16 98.97 97.73 94.99 87.77 84.04 76.71 -5.23 -1.20 -4.13 -4.71 -0.66 -3.81 -1.38 -1.95 -3.88 -2.26 0.25 -1.96 rehtnap 62
63 Distill 63.93 54.24 64.89 71.51 64.53 66.97 87.81 86.16 81.16 80.05 72.43 63.13 -28.39 -13.13 -14.68 -14.85 -3.32 -8.95 -37.60 -38.04 -23.94 -17.25 -13.28 -21.21 66.97 57.46 64.89 71.51 64.53 66.97 87.81 86.16 82.12 81.12 78.99 68.44 -28.18 -13.21 -14.99 -16.49 -4.68 -9.05 -49.00 -36.02 -40.35 -16.92 -5.04 -16.51 Distill 63
64 3D−JIGSAW_AEP 45.85 42.87 36.52 44.19 41.36 43.73 99.59 98.76 95.89 5.85 5.32 -11.41 -49.70 -18.69 -34.71 -35.06 -7.88 -19.27 1.41 1.73 -0.37 -167.95 -94.98 -130.03 51.24 43.07 45.87 53.82 44.30 58.04 99.79 99.24 95.89 9.84 8.95 -7.54 -48.82 -20.92 -28.31 -30.66 -9.37 -12.89 2.12 2.50 -1.33 -174.10 -78.40 -150.25 3D−JIGSAW_AEP 64
65 mariner1 6.69 5.37 8.09 12.04 9.66 16.55 15.91 13.09 19.84 17.82 14.98 9.12 -95.88 -37.01 -54.78 -58.84 -14.13 -31.33 -275.65 -268.70 -122.04 -143.64 -83.22 -100.06 9.82 7.30 8.09 17.44 13.01 16.55 19.42 15.29 19.84 19.95 16.14 17.72 -103.17 -40.07 -54.77 -59.80 -16.64 -30.72 -340.82 -244.68 -216.85 -151.81 -70.87 -105.79 mariner1 65
66 RBO−Proteus 5.90 5.30 14.44 10.13 9.05 17.59 22.93 20.80 31.85 18.35 17.64 23.40 -96.81 -37.04 -50.30 -60.25 -14.25 -30.86 -252.41 -244.36 -102.82 -142.57 -79.98 -79.21 6.27 5.93 14.91 10.13 9.05 18.22 27.07 22.80 37.42 22.34 19.68 25.00 -107.83 -40.80 -50.00 -65.65 -17.55 -30.00 -308.18 -222.57 -167.03 -146.54 -67.16 -92.98 RBO−Proteus 66
67 RANDOM 5.32 4.54 5.32 9.19 7.58 9.19 17.60 15.14 17.60 19.81 16.52 19.81 -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45 5.32 4.54 5.32 9.19 7.58 9.19 17.60 15.14 17.60 19.81 16.52 19.81 -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 RANDOM 67
68 FOLDpro 4.71 4.41 8.18 7.89 7.47 12.35 14.67 11.23 15.76 21.28 19.59 24.30 -98.21 -37.48 -54.72 -61.91 -14.56 -33.19 -279.75 -274.57 -128.56 -136.62 -77.61 -77.90 6.18 5.11 8.57 11.13 9.19 12.37 19.01 18.18 22.85 21.28 19.59 24.30 -107.95 -41.24 -54.44 -64.85 -17.52 -32.52 -342.57 -236.17 -208.32 -148.88 -67.26 -94.21 FOLDpro 68
69 OLGAFS 2.54 2.44 -23.65 4.57 4.40 -17.82 0.00 0.00 -22.19 0.00 0.00 -12.73 -100.77 -38.44 -77.19 -64.36 -15.17 -46.58 -328.33 -310.02 -189.28 -179.84 -101.46 -131.96 3.37 2.94 -17.22 6.06 5.29 -6.48 0.00 0.00 -22.19 0.00 0.00 -12.73 -111.64 -42.40 -72.50 -68.91 -18.43 -40.62 -423.69 -289.70 -335.97 -195.80 -87.78 -159.39 OLGAFS 69
70 BHAGEERATH                                                                         -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45                                                                         -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 BHAGEERATH 70
71 Frankenstein                                                                         -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45                                                                         -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 Frankenstein 71
72 mahmood−torda−server                                                                         -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45                                                                         -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 mahmood−torda−server 72
73 schenk−torda−server                                                                         -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45                                                                         -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 schenk−torda−server 73
74 test_http_server_01                                                                         -97.49 -37.41 -56.74 -60.94 -14.54 -34.59 -270.05 -262.22 -125.62 -139.60 -81.35 -84.45                                                                         -109.08 -41.54 -56.71 -66.41 -17.90 -33.89 -348.59 -245.12 -223.20 -152.12 -70.47 -102.11 test_http_server_01 74