| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0349 |
All predicted COG clusters |
|---|---|---|---|
| 1g001155m | 1136 | hhsearch probability: 95.57 Identity: 18% subject length: 361 Length of aligned reigon: 71 Coverage over query: 951-1024 Coverage over subject: 210-280 |
COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1204, Superfamily II helicase [General function prediction only] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG3587, Restriction endonuclease [Defense mechanisms] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] |
| 1g035988m | 692 | hhsearch probability: 97.65 Identity: 16% subject length: 361 Length of aligned reigon: 98 Coverage over query: 574-677 Coverage over subject: 209-308 |
COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG1204, Superfamily II helicase [General function prediction only] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG3587, Restriction endonuclease [Defense mechanisms] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG3421, Uncharacterized protein conserved in bacteria [Function unknown] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] |
| 1g000107m | 2191 | hhsearch probability: 98.65 Identity: 12% subject length: 361 Length of aligned reigon: 171 Coverage over query: 1494-1736 Coverage over subject: 3-176 |
COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1204, Superfamily II helicase [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG3421, Uncharacterized protein conserved in bacteria [Function unknown] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG3587, Restriction endonuclease [Defense mechanisms] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] |
| 1g017267m | 374 | hhsearch probability: 92.69 Identity: 13% subject length: 361 Length of aligned reigon: 133 Coverage over query: 96-277 Coverage over subject: 17-166 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g015078m | 413 | hhsearch probability: 90.42 Identity: 15% subject length: 361 Length of aligned reigon: 132 Coverage over query: 135-315 Coverage over subject: 17-165 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g015017m | 414 | hhsearch probability: 90.63 Identity: 14% subject length: 361 Length of aligned reigon: 132 Coverage over query: 136-316 Coverage over subject: 17-165 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g018586m | 353 | hhsearch probability: 97.27 Identity: 22% subject length: 361 Length of aligned reigon: 137 Coverage over query: 133-310 Coverage over subject: 15-168 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g016965m | 379 | hhsearch probability: 94.34 Identity: 14% subject length: 361 Length of aligned reigon: 135 Coverage over query: 136-319 Coverage over subject: 17-168 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g017210m | 375 | hhsearch probability: 94.66 Identity: 14% subject length: 361 Length of aligned reigon: 132 Coverage over query: 97-279 Coverage over subject: 17-167 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g037872m | 146 | hhsearch probability: 96.68 Identity: 26% subject length: 361 Length of aligned reigon: 93 Coverage over query: 14-123 Coverage over subject: 59-167 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g018558m | 354 | hhsearch probability: 97.35 Identity: 19% subject length: 361 Length of aligned reigon: 134 Coverage over query: 132-307 Coverage over subject: 17-168 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g010297m | 513 | hhsearch probability: 95.61 Identity: 19% subject length: 361 Length of aligned reigon: 141 Coverage over query: 7-191 Coverage over subject: 16-176 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g019538m | 339 | hhsearch probability: 97.57 Identity: 27% subject length: 361 Length of aligned reigon: 135 Coverage over query: 127-307 Coverage over subject: 17-167 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g036883m | 277 | hhsearch probability: 94.57 Identity: 16% subject length: 361 Length of aligned reigon: 129 Coverage over query: 3-181 Coverage over subject: 18-164 |
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g019380m | 342 | hhsearch probability: 97.63 Identity: 23% subject length: 361 Length of aligned reigon: 137 Coverage over query: 122-299 Coverage over subject: 15-168 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g029428m | 193 | hhsearch probability: 92.41 Identity: 20% subject length: 361 Length of aligned reigon: 87 Coverage over query: 79-192 Coverage over subject: 16-106 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g013825m | 436 | hhsearch probability: 96.79 Identity: 18% subject length: 361 Length of aligned reigon: 142 Coverage over query: 7-192 Coverage over subject: 16-177 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g023805m | 277 | hhsearch probability: 97.79 Identity: 20% subject length: 361 Length of aligned reigon: 136 Coverage over query: 12-191 Coverage over subject: 16-171 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g025709m | 249 | hhsearch probability: 95.03 Identity: 17% subject length: 361 Length of aligned reigon: 125 Coverage over query: 69-244 Coverage over subject: 17-168 |
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g027892m | 217 | hhsearch probability: 96.14 Identity: 16% subject length: 361 Length of aligned reigon: 133 Coverage over query: 35-214 Coverage over subject: 15-170 |
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g018152m | 360 | hhsearch probability: 97.33 Identity: 21% subject length: 361 Length of aligned reigon: 132 Coverage over query: 141-298 Coverage over subject: 16-164 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g008340m | 569 | hhsearch probability: 96.40 Identity: 22% subject length: 361 Length of aligned reigon: 124 Coverage over query: 212-362 Coverage over subject: 17-152 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1015, DeoB Phosphopentomutase [Carbohydrate transport and metabolism] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g010743m | 502 | hhsearch probability: 97.30 Identity: 21% subject length: 361 Length of aligned reigon: 133 Coverage over query: 141-299 Coverage over subject: 16-165 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g017922m | 364 | hhsearch probability: 97.72 Identity: 20% subject length: 361 Length of aligned reigon: 133 Coverage over query: 4-162 Coverage over subject: 17-166 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g048020m | 304 | hhsearch probability: 94.46 Identity: 17% subject length: 361 Length of aligned reigon: 133 Coverage over query: 7-152 Coverage over subject: 16-169 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g008596m | 560 | hhsearch probability: 96.82 Identity: 22% subject length: 361 Length of aligned reigon: 125 Coverage over query: 212-363 Coverage over subject: 17-153 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1015, DeoB Phosphopentomutase [Carbohydrate transport and metabolism] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g024291m | 269 | hhsearch probability: 97.95 Identity: 24% subject length: 361 Length of aligned reigon: 124 Coverage over query: 79-229 Coverage over subject: 16-164 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g023906m | 275 | hhsearch probability: 98.30 Identity: 23% subject length: 361 Length of aligned reigon: 132 Coverage over query: 80-238 Coverage over subject: 17-167 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g023843m | 276 | hhsearch probability: 98.77 Identity: 22% subject length: 361 Length of aligned reigon: 133 Coverage over query: 80-240 Coverage over subject: 17-168 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g023967m | 274 | hhsearch probability: 94.65 Identity: 28% subject length: 361 Length of aligned reigon: 82 Coverage over query: 154-252 Coverage over subject: 68-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g023963m | 274 | hhsearch probability: 94.89 Identity: 26% subject length: 361 Length of aligned reigon: 82 Coverage over query: 153-251 Coverage over subject: 68-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g024017m | 274 | hhsearch probability: 94.89 Identity: 26% subject length: 361 Length of aligned reigon: 82 Coverage over query: 153-251 Coverage over subject: 68-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g023991m | 274 | hhsearch probability: 94.80 Identity: 26% subject length: 361 Length of aligned reigon: 76 Coverage over query: 159-251 Coverage over subject: 74-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g023614m | 280 | hhsearch probability: 95.58 Identity: 23% subject length: 361 Length of aligned reigon: 90 Coverage over query: 145-259 Coverage over subject: 60-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g025183m | 256 | hhsearch probability: 96.39 Identity: 27% subject length: 361 Length of aligned reigon: 144 Coverage over query: 26-235 Coverage over subject: 5-167 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g022773m | 292 | hhsearch probability: 94.44 Identity: 22% subject length: 361 Length of aligned reigon: 92 Coverage over query: 158-275 Coverage over subject: 58-168 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g038950m | 297 | hhsearch probability: 95.59 Identity: 21% subject length: 361 Length of aligned reigon: 71 Coverage over query: 146-236 Coverage over subject: 74-163 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g001207m | 1123 | hhsearch probability: 99.76 Identity: 22% subject length: 361 Length of aligned reigon: 170 Coverage over query: 348-582 Coverage over subject: 1-171 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g002293m | 940 | hhsearch probability: 99.77 Identity: 20% subject length: 361 Length of aligned reigon: 216 Coverage over query: 348-636 Coverage over subject: 1-222 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g001267m | 1112 | hhsearch probability: 99.79 Identity: 19% subject length: 361 Length of aligned reigon: 217 Coverage over query: 348-637 Coverage over subject: 1-223 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g037980m | 123 | hhsearch probability: 98.18 Identity: 14% subject length: 361 Length of aligned reigon: 85 Coverage over query: 37-121 Coverage over subject: 16-103 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g044490m | 430 | hhsearch probability: 97.58 Identity: 17% subject length: 361 Length of aligned reigon: 77 Coverage over query: 105-182 Coverage over subject: 204-280 |
COG4955, Uncharacterized protein conserved in bacteria [Function unknown] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] |
| 1g009284m | 538 | hhsearch probability: 99.83 Identity: 29% subject length: 361 Length of aligned reigon: 165 Coverage over query: 320-497 Coverage over subject: 2-170 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g009909m | 522 | hhsearch probability: 99.93 Identity: 27% subject length: 361 Length of aligned reigon: 179 Coverage over query: 19-232 Coverage over subject: 4-185 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g009000m | 547 | hhsearch probability: 99.83 Identity: 29% subject length: 361 Length of aligned reigon: 165 Coverage over query: 329-506 Coverage over subject: 2-170 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g022027m | 304 | hhsearch probability: 99.89 Identity: 24% subject length: 361 Length of aligned reigon: 164 Coverage over query: 101-282 Coverage over subject: 2-166 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g037014m | 198 | hhsearch probability: 99.97 Identity: 17% subject length: 361 Length of aligned reigon: 162 Coverage over query: 21-194 Coverage over subject: 3-164 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g043928m | 192 | hhsearch probability: 99.96 Identity: 19% subject length: 361 Length of aligned reigon: 159 Coverage over query: 22-191 Coverage over subject: 5-167 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g048832m | 211 | hhsearch probability: 99.94 Identity: 20% subject length: 361 Length of aligned reigon: 161 Coverage over query: 35-208 Coverage over subject: 4-164 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g039658m | 198 | hhsearch probability: 99.97 Identity: 17% subject length: 361 Length of aligned reigon: 161 Coverage over query: 19-197 Coverage over subject: 2-166 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g009712m | 528 | hhsearch probability: 99.53 Identity: 23% subject length: 361 Length of aligned reigon: 114 Coverage over query: 17-134 Coverage over subject: 170-283 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] |
| 1g026397m | 239 | hhsearch probability: 99.93 Identity: 21% subject length: 361 Length of aligned reigon: 159 Coverage over query: 41-212 Coverage over subject: 3-171 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g045621m | 205 | hhsearch probability: 99.83 Identity: 24% subject length: 361 Length of aligned reigon: 121 Coverage over query: 75-200 Coverage over subject: 31-180 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g009948m | 522 | hhsearch probability: 99.96 Identity: 24% subject length: 361 Length of aligned reigon: 215 Coverage over query: 19-273 Coverage over subject: 4-223 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g009783m | 526 | hhsearch probability: 99.97 Identity: 25% subject length: 361 Length of aligned reigon: 211 Coverage over query: 19-270 Coverage over subject: 4-216 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g010106m | 518 | hhsearch probability: 99.96 Identity: 25% subject length: 361 Length of aligned reigon: 208 Coverage over query: 19-266 Coverage over subject: 4-216 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g002503m | 914 | hhsearch probability: 100.00 Identity: 29% subject length: 361 Length of aligned reigon: 286 Coverage over query: 112-438 Coverage over subject: 1-287 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g006352m | 649 | hhsearch probability: 100.00 Identity: 26% subject length: 361 Length of aligned reigon: 242 Coverage over query: 1-255 Coverage over subject: 41-283 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] |
| 1g003416m | 821 | hhsearch probability: 100.00 Identity: 23% subject length: 361 Length of aligned reigon: 343 Coverage over query: 133-492 Coverage over subject: 1-361 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g006313m | 651 | hhsearch probability: 100.00 Identity: 27% subject length: 361 Length of aligned reigon: 244 Coverage over query: 1-257 Coverage over subject: 39-283 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] |
| 1g016210m | 393 | hhsearch probability: 100.00 Identity: 22% subject length: 361 Length of aligned reigon: 246 Coverage over query: 19-302 Coverage over subject: 4-262 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g019356m | 342 | hhsearch probability: 100.00 Identity: 22% subject length: 361 Length of aligned reigon: 249 Coverage over query: 32-304 Coverage over subject: 2-280 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] |
| 1g013817m | 436 | hhsearch probability: 99.98 Identity: 24% subject length: 361 Length of aligned reigon: 216 Coverage over query: 19-274 Coverage over subject: 4-224 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1656, Uncharacterized conserved protein [Function unknown] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g020975m | 319 | hhsearch probability: 100.00 Identity: 21% subject length: 361 Length of aligned reigon: 248 Coverage over query: 32-300 Coverage over subject: 2-283 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g019798m | 335 | hhsearch probability: 100.00 Identity: 22% subject length: 361 Length of aligned reigon: 246 Coverage over query: 32-298 Coverage over subject: 2-281 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] |
| 1g020198m | 329 | hhsearch probability: 100.00 Identity: 21% subject length: 361 Length of aligned reigon: 247 Coverage over query: 33-303 Coverage over subject: 3-279 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |