| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG4941 |
All predicted COG clusters |
|---|---|---|---|
| 1g043837m | 409 | hhsearch probability: 93.12 Identity: 12% subject length: 415 Length of aligned reigon: 166 Coverage over query: 106-283 Coverage over subject: 212-406 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG2912, Uncharacterized conserved protein [Function unknown] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] COG4907, Predicted membrane protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g027158m | 227 | hhsearch probability: 90.23 Identity: 18% subject length: 415 Length of aligned reigon: 152 Coverage over query: 6-161 Coverage over subject: 212-397 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG5536, BET4 Protein prenyltransferase, alpha subunit [Posttranslational modification, protein turnover, chaperones] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g007634m | 595 | hhsearch probability: 90.61 Identity: 12% subject length: 415 Length of aligned reigon: 158 Coverage over query: 281-439 Coverage over subject: 211-402 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g010276m | 514 | hhsearch probability: 91.17 Identity: 13% subject length: 415 Length of aligned reigon: 184 Coverage over query: 229-422 Coverage over subject: 210-404 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG2912, Uncharacterized conserved protein [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g024618m | 265 | hhsearch probability: 92.89 Identity: 16% subject length: 415 Length of aligned reigon: 183 Coverage over query: 56-248 Coverage over subject: 211-405 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG5187, RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG5536, BET4 Protein prenyltransferase, alpha subunit [Posttranslational modification, protein turnover, chaperones] |
| 1g011845m | 476 | hhsearch probability: 91.22 Identity: 16% subject length: 415 Length of aligned reigon: 189 Coverage over query: 129-327 Coverage over subject: 211-405 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG2912, Uncharacterized conserved protein [Function unknown] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g009278m | 538 | hhsearch probability: 91.71 Identity: 14% subject length: 415 Length of aligned reigon: 188 Coverage over query: 266-498 Coverage over subject: 212-406 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g029105m | 199 | hhsearch probability: 92.33 Identity: 14% subject length: 415 Length of aligned reigon: 93 Coverage over query: 72-165 Coverage over subject: 311-405 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2912, Uncharacterized conserved protein [Function unknown] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g025537m | 251 | hhsearch probability: 90.70 Identity: 19% subject length: 415 Length of aligned reigon: 85 Coverage over query: 161-247 Coverage over subject: 311-397 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g022205m | 301 | hhsearch probability: 93.46 Identity: 18% subject length: 415 Length of aligned reigon: 152 Coverage over query: 80-235 Coverage over subject: 212-397 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2912, Uncharacterized conserved protein [Function unknown] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG5536, BET4 Protein prenyltransferase, alpha subunit [Posttranslational modification, protein turnover, chaperones] |
| 1g009799m | 525 | hhsearch probability: 94.02 Identity: 14% subject length: 415 Length of aligned reigon: 189 Coverage over query: 266-499 Coverage over subject: 212-407 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG2912, Uncharacterized conserved protein [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] |
| 1g004340m | 760 | hhsearch probability: 92.18 Identity: 12% subject length: 415 Length of aligned reigon: 193 Coverage over query: 550-751 Coverage over subject: 212-412 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2912, Uncharacterized conserved protein [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] |
| 1g010864m | 498 | hhsearch probability: 90.13 Identity: 17% subject length: 415 Length of aligned reigon: 181 Coverage over query: 136-352 Coverage over subject: 208-403 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG2912, Uncharacterized conserved protein [Function unknown] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g040951m | 701 | hhsearch probability: 92.19 Identity: 16% subject length: 415 Length of aligned reigon: 180 Coverage over query: 373-561 Coverage over subject: 213-401 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] |
| 1g026145m | 243 | hhsearch probability: 94.80 Identity: 12% subject length: 415 Length of aligned reigon: 133 Coverage over query: 102-241 Coverage over subject: 271-408 |
COG1905, NuoE NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3411, Ferredoxin [Energy production and conversion] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG5469, Predicted metal-binding protein [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] COG4455, ImpE Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only] |
| 1g036703m | 365 | hhsearch probability: 94.78 Identity: 15% subject length: 415 Length of aligned reigon: 158 Coverage over query: 188-356 Coverage over subject: 211-396 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] |
| 1g013299m | 446 | hhsearch probability: 93.18 Identity: 14% subject length: 415 Length of aligned reigon: 123 Coverage over query: 296-420 Coverage over subject: 270-397 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2912, Uncharacterized conserved protein [Function unknown] |
| 1g013398m | 444 | hhsearch probability: 93.56 Identity: 14% subject length: 415 Length of aligned reigon: 125 Coverage over query: 296-423 Coverage over subject: 270-400 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] |
| 1g013353m | 444 | hhsearch probability: 93.56 Identity: 14% subject length: 415 Length of aligned reigon: 125 Coverage over query: 296-423 Coverage over subject: 270-400 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] |
| 1g013375m | 444 | hhsearch probability: 93.56 Identity: 14% subject length: 415 Length of aligned reigon: 125 Coverage over query: 296-423 Coverage over subject: 270-400 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2912, Uncharacterized conserved protein [Function unknown] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] |
| 1g004984m | 721 | hhsearch probability: 92.07 Identity: 19% subject length: 415 Length of aligned reigon: 125 Coverage over query: 495-645 Coverage over subject: 272-406 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG2912, Uncharacterized conserved protein [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g005106m | 714 | hhsearch probability: 92.05 Identity: 19% subject length: 415 Length of aligned reigon: 125 Coverage over query: 495-645 Coverage over subject: 272-406 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG2912, Uncharacterized conserved protein [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] |
| 1g004426m | 754 | hhsearch probability: 91.23 Identity: 17% subject length: 415 Length of aligned reigon: 127 Coverage over query: 531-682 Coverage over subject: 272-407 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2912, Uncharacterized conserved protein [Function unknown] |
| 1g027087m | 228 | hhsearch probability: 90.81 Identity: 19% subject length: 415 Length of aligned reigon: 96 Coverage over query: 109-209 Coverage over subject: 309-406 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2912, Uncharacterized conserved protein [Function unknown] |
| 1g013821m | 436 | hhsearch probability: 95.18 Identity: 16% subject length: 415 Length of aligned reigon: 188 Coverage over query: 213-428 Coverage over subject: 211-401 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] |
| 1g007721m | 591 | hhsearch probability: 93.26 Identity: 17% subject length: 415 Length of aligned reigon: 128 Coverage over query: 367-519 Coverage over subject: 271-407 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG2912, Uncharacterized conserved protein [Function unknown] COG5201, SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] |
| 1g003249m | 836 | hhsearch probability: 92.46 Identity: 16% subject length: 415 Length of aligned reigon: 190 Coverage over query: 462-677 Coverage over subject: 213-405 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG2912, Uncharacterized conserved protein [Function unknown] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] |
| 1g013800m | 436 | hhsearch probability: 95.64 Identity: 15% subject length: 415 Length of aligned reigon: 188 Coverage over query: 214-429 Coverage over subject: 212-402 |
COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only] COG2976, Uncharacterized protein conserved in bacteria [Function unknown] COG3914, Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG3629, DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] COG4649, Uncharacterized protein conserved in bacteria [Function unknown] COG5159, RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] COG2912, Uncharacterized conserved protein [Function unknown] |
| 1g011992m | 473 | hhsearch probability: 95.53 Identity: 16% subject length: 415 Length of aligned reigon: 125 Coverage over query: 331-459 Coverage over subject: 8-167 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g010092m | 518 | hhsearch probability: 94.98 Identity: 19% subject length: 415 Length of aligned reigon: 57 Coverage over query: 446-506 Coverage over subject: 110-166 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g010284m | 513 | hhsearch probability: 95.16 Identity: 19% subject length: 415 Length of aligned reigon: 58 Coverage over query: 440-501 Coverage over subject: 109-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010338m | 513 | hhsearch probability: 95.16 Identity: 19% subject length: 415 Length of aligned reigon: 58 Coverage over query: 440-501 Coverage over subject: 109-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010327m | 513 | hhsearch probability: 95.16 Identity: 19% subject length: 415 Length of aligned reigon: 58 Coverage over query: 440-501 Coverage over subject: 109-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010308m | 513 | hhsearch probability: 95.16 Identity: 19% subject length: 415 Length of aligned reigon: 58 Coverage over query: 440-501 Coverage over subject: 109-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g009567m | 532 | hhsearch probability: 95.52 Identity: 24% subject length: 415 Length of aligned reigon: 49 Coverage over query: 466-518 Coverage over subject: 119-167 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008652m | 558 | hhsearch probability: 95.60 Identity: 18% subject length: 415 Length of aligned reigon: 159 Coverage over query: 320-544 Coverage over subject: 8-167 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008556m | 561 | hhsearch probability: 95.53 Identity: 18% subject length: 415 Length of aligned reigon: 159 Coverage over query: 323-547 Coverage over subject: 8-167 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g008352m | 569 | hhsearch probability: 95.97 Identity: 18% subject length: 415 Length of aligned reigon: 159 Coverage over query: 331-555 Coverage over subject: 8-167 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g009803m | 525 | hhsearch probability: 96.46 Identity: 11% subject length: 415 Length of aligned reigon: 159 Coverage over query: 288-512 Coverage over subject: 8-167 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g007404m | 605 | hhsearch probability: 96.56 Identity: 11% subject length: 415 Length of aligned reigon: 159 Coverage over query: 368-592 Coverage over subject: 8-167 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG3413, Predicted DNA binding protein [General function prediction only] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g010521m | 508 | hhsearch probability: 96.72 Identity: 12% subject length: 415 Length of aligned reigon: 159 Coverage over query: 267-494 Coverage over subject: 8-166 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g010527m | 508 | hhsearch probability: 96.72 Identity: 12% subject length: 415 Length of aligned reigon: 159 Coverage over query: 267-494 Coverage over subject: 8-166 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g010835m | 499 | hhsearch probability: 96.76 Identity: 12% subject length: 415 Length of aligned reigon: 160 Coverage over query: 257-485 Coverage over subject: 7-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g009449m | 534 | hhsearch probability: 96.86 Identity: 20% subject length: 415 Length of aligned reigon: 158 Coverage over query: 299-522 Coverage over subject: 9-167 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g011454m | 485 | hhsearch probability: 97.11 Identity: 11% subject length: 415 Length of aligned reigon: 161 Coverage over query: 265-471 Coverage over subject: 6-166 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g046578m | 379 | hhsearch probability: 98.11 Identity: 14% subject length: 415 Length of aligned reigon: 161 Coverage over query: 142-368 Coverage over subject: 6-167 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |