| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG2176 |
All predicted COG clusters |
|---|---|---|---|
| 1g024592m | 265 | hhsearch probability: 94.72 Identity: 17% subject length: 1444 Length of aligned reigon: 78 Coverage over query: 68-145 Coverage over subject: 240-324 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g043474m | 160 | hhsearch probability: 95.17 Identity: 19% subject length: 1444 Length of aligned reigon: 81 Coverage over query: 35-133 Coverage over subject: 238-324 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] |
| 1g023576m | 280 | hhsearch probability: 94.94 Identity: 20% subject length: 1444 Length of aligned reigon: 79 Coverage over query: 70-148 Coverage over subject: 239-324 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g000430m | 1517 | hhsearch probability: 94.50 Identity: 19% subject length: 1444 Length of aligned reigon: 140 Coverage over query: 548-749 Coverage over subject: 417-558 |
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g032530m | 139 | hhsearch probability: 92.17 Identity: 10% subject length: 1444 Length of aligned reigon: 102 Coverage over query: 5-109 Coverage over subject: 233-348 |
COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1599, RFA1 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g037014m | 198 | hhsearch probability: 92.54 Identity: 23% subject length: 1444 Length of aligned reigon: 87 Coverage over query: 85-194 Coverage over subject: 493-584 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g000161m | 1988 | hhsearch probability: 97.48 Identity: 25% subject length: 1444 Length of aligned reigon: 137 Coverage over query: 232-406 Coverage over subject: 414-561 |
COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] |
| 1g048832m | 211 | hhsearch probability: 94.44 Identity: 16% subject length: 1444 Length of aligned reigon: 128 Coverage over query: 54-207 Coverage over subject: 420-583 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g009948m | 522 | hhsearch probability: 94.45 Identity: 19% subject length: 1444 Length of aligned reigon: 103 Coverage over query: 91-222 Coverage over subject: 490-592 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g013817m | 436 | hhsearch probability: 95.74 Identity: 19% subject length: 1444 Length of aligned reigon: 109 Coverage over query: 91-228 Coverage over subject: 490-599 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1656, Uncharacterized conserved protein [Function unknown] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g026397m | 239 | hhsearch probability: 94.06 Identity: 20% subject length: 1444 Length of aligned reigon: 127 Coverage over query: 63-215 Coverage over subject: 420-594 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g009783m | 526 | hhsearch probability: 94.77 Identity: 19% subject length: 1444 Length of aligned reigon: 103 Coverage over query: 91-222 Coverage over subject: 490-592 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g003416m | 821 | hhsearch probability: 94.46 Identity: 21% subject length: 1444 Length of aligned reigon: 136 Coverage over query: 146-302 Coverage over subject: 418-590 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g010106m | 518 | hhsearch probability: 95.17 Identity: 20% subject length: 1444 Length of aligned reigon: 103 Coverage over query: 91-222 Coverage over subject: 490-592 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g002503m | 914 | hhsearch probability: 93.13 Identity: 19% subject length: 1444 Length of aligned reigon: 135 Coverage over query: 126-281 Coverage over subject: 419-591 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g016210m | 393 | hhsearch probability: 95.70 Identity: 20% subject length: 1444 Length of aligned reigon: 104 Coverage over query: 90-222 Coverage over subject: 489-592 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g023991m | 274 | hhsearch probability: 93.15 Identity: 24% subject length: 1444 Length of aligned reigon: 84 Coverage over query: 157-252 Coverage over subject: 503-588 |
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g009909m | 522 | hhsearch probability: 95.63 Identity: 18% subject length: 1444 Length of aligned reigon: 151 Coverage over query: 28-222 Coverage over subject: 417-592 |
COG1656, Uncharacterized conserved protein [Function unknown] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG4634, Uncharacterized protein conserved in bacteria [Function unknown] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g035971m | 614 | hhsearch probability: 93.53 Identity: 36% subject length: 1444 Length of aligned reigon: 42 Coverage over query: 561-604 Coverage over subject: 1384-1426 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] |
| 1g019356m | 342 | hhsearch probability: 95.84 Identity: 21% subject length: 1444 Length of aligned reigon: 239 Coverage over query: 46-324 Coverage over subject: 418-738 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] |
| 1g005960m | 667 | hhsearch probability: 95.61 Identity: 23% subject length: 1444 Length of aligned reigon: 52 Coverage over query: 600-651 Coverage over subject: 1384-1436 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG2183, Tex Transcriptional accessory protein [Transcription] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] |
| 1g005372m | 699 | hhsearch probability: 95.76 Identity: 24% subject length: 1444 Length of aligned reigon: 51 Coverage over query: 597-647 Coverage over subject: 1384-1435 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] |
| 1g020975m | 319 | hhsearch probability: 96.56 Identity: 16% subject length: 1444 Length of aligned reigon: 140 Coverage over query: 46-223 Coverage over subject: 418-593 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g008596m | 560 | hhsearch probability: 99.78 Identity: 25% subject length: 1444 Length of aligned reigon: 152 Coverage over query: 212-369 Coverage over subject: 421-585 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1015, DeoB Phosphopentomutase [Carbohydrate transport and metabolism] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g020198m | 329 | hhsearch probability: 94.19 Identity: 17% subject length: 1444 Length of aligned reigon: 141 Coverage over query: 46-224 Coverage over subject: 418-594 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g008340m | 569 | hhsearch probability: 99.78 Identity: 24% subject length: 1444 Length of aligned reigon: 154 Coverage over query: 212-371 Coverage over subject: 421-587 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG1015, DeoB Phosphopentomutase [Carbohydrate transport and metabolism] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g019798m | 335 | hhsearch probability: 97.07 Identity: 16% subject length: 1444 Length of aligned reigon: 139 Coverage over query: 46-222 Coverage over subject: 418-592 |
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] |
| 1g018152m | 360 | hhsearch probability: 99.92 Identity: 21% subject length: 1444 Length of aligned reigon: 162 Coverage over query: 137-304 Coverage over subject: 416-590 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g010743m | 502 | hhsearch probability: 99.92 Identity: 20% subject length: 1444 Length of aligned reigon: 162 Coverage over query: 138-305 Coverage over subject: 417-591 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g001207m | 1123 | hhsearch probability: 98.72 Identity: 22% subject length: 1444 Length of aligned reigon: 116 Coverage over query: 367-490 Coverage over subject: 421-557 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g024291m | 269 | hhsearch probability: 99.94 Identity: 26% subject length: 1444 Length of aligned reigon: 160 Coverage over query: 70-233 Coverage over subject: 411-588 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g001267m | 1112 | hhsearch probability: 98.78 Identity: 23% subject length: 1444 Length of aligned reigon: 119 Coverage over query: 367-490 Coverage over subject: 421-557 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g002293m | 940 | hhsearch probability: 98.62 Identity: 23% subject length: 1444 Length of aligned reigon: 117 Coverage over query: 367-491 Coverage over subject: 421-558 |
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g023627m | 279 | hhsearch probability: 99.09 Identity: 22% subject length: 1444 Length of aligned reigon: 81 Coverage over query: 3-92 Coverage over subject: 416-587 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g023906m | 275 | hhsearch probability: 99.96 Identity: 26% subject length: 1444 Length of aligned reigon: 164 Coverage over query: 71-238 Coverage over subject: 412-587 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g014031m | 432 | hhsearch probability: 98.99 Identity: 35% subject length: 1444 Length of aligned reigon: 72 Coverage over query: 70-141 Coverage over subject: 332-405 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| 1g023843m | 276 | hhsearch probability: 99.93 Identity: 27% subject length: 1444 Length of aligned reigon: 177 Coverage over query: 71-251 Coverage over subject: 412-600 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g012987m | 452 | hhsearch probability: 98.98 Identity: 35% subject length: 1444 Length of aligned reigon: 72 Coverage over query: 70-141 Coverage over subject: 332-405 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| 1g012942m | 453 | hhsearch probability: 99.01 Identity: 34% subject length: 1444 Length of aligned reigon: 74 Coverage over query: 69-142 Coverage over subject: 331-406 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| 1g036883m | 277 | hhsearch probability: 99.96 Identity: 24% subject length: 1444 Length of aligned reigon: 163 Coverage over query: 3-182 Coverage over subject: 422-585 |
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g018376m | 357 | hhsearch probability: 99.07 Identity: 36% subject length: 1444 Length of aligned reigon: 70 Coverage over query: 71-140 Coverage over subject: 333-404 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0084, TatD Mg-dependent DNase [DNA replication, recombination, and repair] |
| 1g020004m | 332 | hhsearch probability: 95.56 Identity: 37% subject length: 1444 Length of aligned reigon: 38 Coverage over query: 2-39 Coverage over subject: 366-403 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g020020m | 332 | hhsearch probability: 95.56 Identity: 37% subject length: 1444 Length of aligned reigon: 38 Coverage over query: 2-39 Coverage over subject: 366-403 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g023805m | 277 | hhsearch probability: 99.95 Identity: 24% subject length: 1444 Length of aligned reigon: 173 Coverage over query: 9-190 Coverage over subject: 417-590 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g018586m | 353 | hhsearch probability: 99.93 Identity: 23% subject length: 1444 Length of aligned reigon: 161 Coverage over query: 131-310 Coverage over subject: 417-588 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g018558m | 354 | hhsearch probability: 99.92 Identity: 23% subject length: 1444 Length of aligned reigon: 182 Coverage over query: 108-307 Coverage over subject: 397-588 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g017922m | 364 | hhsearch probability: 99.95 Identity: 21% subject length: 1444 Length of aligned reigon: 160 Coverage over query: 3-168 Coverage over subject: 420-592 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g029428m | 193 | hhsearch probability: 99.86 Identity: 25% subject length: 1444 Length of aligned reigon: 119 Coverage over query: 69-189 Coverage over subject: 410-539 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g027892m | 217 | hhsearch probability: 99.96 Identity: 21% subject length: 1444 Length of aligned reigon: 157 Coverage over query: 35-210 Coverage over subject: 419-586 |
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g019380m | 342 | hhsearch probability: 99.92 Identity: 23% subject length: 1444 Length of aligned reigon: 158 Coverage over query: 123-299 Coverage over subject: 420-588 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g019951m | 333 | hhsearch probability: 99.27 Identity: 35% subject length: 1444 Length of aligned reigon: 71 Coverage over query: 71-141 Coverage over subject: 333-405 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0084, TatD Mg-dependent DNase [DNA replication, recombination, and repair] |
| 1g013825m | 436 | hhsearch probability: 99.97 Identity: 18% subject length: 1444 Length of aligned reigon: 200 Coverage over query: 3-212 Coverage over subject: 416-617 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g027707m | 220 | hhsearch probability: 99.25 Identity: 20% subject length: 1444 Length of aligned reigon: 85 Coverage over query: 3-91 Coverage over subject: 416-597 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g027882m | 217 | hhsearch probability: 99.26 Identity: 20% subject length: 1444 Length of aligned reigon: 85 Coverage over query: 3-91 Coverage over subject: 416-597 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g027750m | 219 | hhsearch probability: 99.25 Identity: 20% subject length: 1444 Length of aligned reigon: 85 Coverage over query: 3-91 Coverage over subject: 416-597 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g019538m | 339 | hhsearch probability: 99.96 Identity: 33% subject length: 1444 Length of aligned reigon: 170 Coverage over query: 120-307 Coverage over subject: 415-587 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g036628m | 254 | hhsearch probability: 99.80 Identity: 23% subject length: 1444 Length of aligned reigon: 142 Coverage over query: 8-163 Coverage over subject: 414-593 |
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] |
| 1g021880m | 306 | hhsearch probability: 99.01 Identity: 35% subject length: 1444 Length of aligned reigon: 71 Coverage over query: 72-142 Coverage over subject: 334-406 |
COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG4464, CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| 1g024455m | 267 | hhsearch probability: 99.66 Identity: 24% subject length: 1444 Length of aligned reigon: 120 Coverage over query: 132-265 Coverage over subject: 418-550 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG5048, FOG: Zn-finger [General function prediction only] |
| 1g025404m | 253 | hhsearch probability: 99.61 Identity: 27% subject length: 1444 Length of aligned reigon: 104 Coverage over query: 132-252 Coverage over subject: 418-525 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5048, FOG: Zn-finger [General function prediction only] |
| 1g025394m | 253 | hhsearch probability: 99.61 Identity: 27% subject length: 1444 Length of aligned reigon: 104 Coverage over query: 132-252 Coverage over subject: 418-525 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5189, SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5048, FOG: Zn-finger [General function prediction only] |
| 1g025709m | 249 | hhsearch probability: 99.96 Identity: 19% subject length: 1444 Length of aligned reigon: 177 Coverage over query: 43-243 Coverage over subject: 400-587 |
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g037872m | 146 | hhsearch probability: 99.86 Identity: 27% subject length: 1444 Length of aligned reigon: 128 Coverage over query: 1-144 Coverage over subject: 481-612 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] |
| 1g015078m | 413 | hhsearch probability: 100.00 Identity: 18% subject length: 1444 Length of aligned reigon: 248 Coverage over query: 40-324 Coverage over subject: 346-594 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g017267m | 374 | hhsearch probability: 100.00 Identity: 19% subject length: 1444 Length of aligned reigon: 233 Coverage over query: 38-288 Coverage over subject: 344-597 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g048020m | 304 | hhsearch probability: 100.00 Identity: 19% subject length: 1444 Length of aligned reigon: 207 Coverage over query: 6-219 Coverage over subject: 419-662 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] |
| 1g020417m | 326 | hhsearch probability: 100.00 Identity: 18% subject length: 1444 Length of aligned reigon: 208 Coverage over query: 73-309 Coverage over subject: 371-593 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] |
| 1g017210m | 375 | hhsearch probability: 100.00 Identity: 19% subject length: 1444 Length of aligned reigon: 231 Coverage over query: 41-289 Coverage over subject: 346-597 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g010297m | 513 | hhsearch probability: 100.00 Identity: 18% subject length: 1444 Length of aligned reigon: 218 Coverage over query: 4-231 Coverage over subject: 417-642 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g016965m | 379 | hhsearch probability: 100.00 Identity: 18% subject length: 1444 Length of aligned reigon: 279 Coverage over query: 42-357 Coverage over subject: 347-628 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |
| 1g015017m | 414 | hhsearch probability: 100.00 Identity: 18% subject length: 1444 Length of aligned reigon: 247 Coverage over query: 42-325 Coverage over subject: 347-594 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only] COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair] COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] COG3359, Predicted exonuclease [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification] COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] |