254780237

254780237

DNA-directed RNA polymerase subunit alpha (EC 2.7.7.6)

GeneID:8209218 Locus tag:CLIBASIA_00610
Protein GI in NCBI database:254780237 Protein Accession:YP_003064650.1
Gene range:- ( 129714 , 130736 ) Protein Length:339aa
NCBI annotation:DNA-directed RNA polymerase subunit alpha
Pathway in KEGG:Purine metabolism [PATH:las00230]
Pyrimidine metabolism [PATH:las00240]
RNA polymerase [PATH:las03020]
Subsystem in SEED:RNA polymerase bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MIQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKEVKEDINVKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGTMGLFLGMNLPDWPPESIEELAKKYEDK
cccccHHHHccccccEEEEcccccccEEEEEEEEcccccccHHHHHHHHHHHHccccccEEEEEEccEEcccccccccHHHHHHHHHHHccEEEEEEccccEEEEEEEEccccEEEcccccccccEEEccccEEEEEccccEEEEEEEEEccccEEcccccccccccccEEEEccEEccEEEEEEEEEEcccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccHHHHcccHHHHHHHHHcccccHHHHHHccHHHHHccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccc
*IQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFE*******EDI**********************************************************************************************
miqknwqelikpnnieyivlgqeeenrtlmiaeplprgfahtlgnalrrvlmsslrgaaitavqidgvlheissikgvhedltdiilnikginlkmsgdshkrvtifkrgpgvvtagdiqtvndievlnpdhvicnldvdavvrmeltvskghgyvpakhhrtendpiglitidalyspikkvsytvesaregqvldydklsmtidtdgsitgedsvalasrilqdqlgmfinfeepkkevkedinvkslpfnpallkkveelelsvrstnclrgenivymgdliqrteadmlrmanfgrkslveikgvlgtmglflgmnlpdwppesieelakkyedk
miqknwqelikpnnieyivlgqeeenrtlmiaeplprgfahtlgnalrrvlmsslrgaaitavqidgvlheissikgvhedltdiilnikginlkmsgdshkrvtifkrgpgvvtagdiqtvndievlnpdhvicnldvdavvrmeltvskghgyvpakhhrtendpiglitidalyspikkvsytvesaregqvldydklsmtidtdgsitgedsvalasrilqdqlgmfinfeepkkevkedinvkslpfnpallkkveelelsvrstnclrgenivymgdliqrteadmlrmanfgrkslveikgvlgtmglflgmnlpdwppesieelakkyedk
MIQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKEVKEDINVKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGTMGLFLGMNLPDWPPESIEELAKKYEDK

Domain archietecture



Structure model(s) of the protein

model for region: 2-331
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