255764496

255764496

excinuclease ABC subunit C

GeneID:8209596 Locus tag:CLIBASIA_02430
Protein GI in NCBI database:255764496 Protein Accession:YP_003065012.2
Gene range:- ( 682088 , 683938 ) Protein Length:615aa
NCBI annotation:excinuclease ABC subunit C
Pathway in KEGG:Nucleotide excision repair [PATH:las03420]
Subsystem in SEED:DNA repair, UvrABC system
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-----
MSSEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHNDSIYNRMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENILLSEEAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQLSAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKAAYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKNTSHTP
ccHHHccccccEEEEEcccccEEEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHEEEEEEEccHHHHHHHHHHHHHHHccHHHHHccccccccEEEEEccccccEEEEEccccccccEEEcccccHHHHHHHHHHHHHHcccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEEEEEEEEEccEEEccccEEEEccccccHHHHHHHHHHHHHcccccccEEEcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccEEEEEEEEccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEccHHHHHHHHHHHHHccccccccEEEEEcccccccccEEEEcccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHccHHHHHHcccccHHHHHHHHHHHcccccccc
**SEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKPRFNILLRD****PYILITDKHKIPALYKHRDSSTIQGSYFGPFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHNDSIYNRMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENILLSEEAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQLSAAQGVLKKLNVENRITIISI********GMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAIT*************************************************E**********************
msseqmpecpgvyqmldiagrvlyvgkaynlqkriksymhsnnhthrithmisqinnirftvtcteveallleanmikrlkprfnillrddksfpyilitdkhkipalykhrdsstiqgsyfgpfasvdavektinslqrtfflrscadsvfrhrtrpcllfqikrcsgpctgeissekymefvheakkflsggnhnlkekiarnmnqatlkedyesaiihrdrlaalshiqnhndsiynrmdcfslyhnknlaciqtcffhfgqnrgtctfflktdsestnaqilsyflrqfytdkpcpenillseeaeetslleisffkqygykvkitvpkqgekrkiieqalinahrshtqklsteishqmilkdftkkfalphipkrieiydnshimgcsavgcmvvvgengfvknqyrkfnlhpndvktqddcammrmvlerrfsqlikneenlnfhpkkqeysfpswpdvvildggkgqlsaaqgvlkklnvenritiisiakgpkrsagmekffvkkgealvlnmrdpilyfiqrlrdeahrfaitthrkrrkkaayspldeingigplrkrlllqsfgtvkmisrsspetlasiegiskkiackiynhfhkntshtp
msseqmpecpgvyqmldiagrvlyvgkaynlqkriksymhsnnhthrithmisqinnirftvtcteveallleanmikrlkprfnillrddksfpyilitdkhkipalykhrdsstiqgsyfgpfasvdavektinslqrtfflrscadsvfrhrtrpcllfqikrcsgpctgeissekymefvheakkflsggnhnlkekiarnmnqatlkedyesaiihrdrlaalshiqnhndsiynrmdcfslyhnknlaciqtcffhfgqnrgtctfflktdsestnaqilsyflrqfytdkpcpenillseeaeetslleisffkqygykvkitvpkqgekrkiieqalinahrshtqklsteishqmilkdftkkfalphipkrieiydnshimgcsavgcmvvvgengfvknqyrkfnlhpndvktqddcammrmvlerrfsqlikneenlnfhpkkqeysfpswpdvvildggkgqlsaaqgvlkklnvenritiisiakgpkrsagmekffvkkgealvlnmrdpilyfiqrlrdeahrfaitthrkrrkkaayspldeingigplrkrlllqsfgtvkmisrsspetlasiegiskkiackiynhfhkntshtp
MSSEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHNDSIYNRMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENILLSEEAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQLSAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKAAYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKNTSHTP

Domain archietecture



Structure model(s) of the protein

model for region: 3-94
model for region: 187-232
model for region: 366-447,462-609
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