254780952

254780952

DNA helicase II

GeneID:8209974 Locus tag:CLIBASIA_04255
Protein GI in NCBI database:254780952 Protein Accession:YP_003065365.1
Gene range:- ( 947244 , 949301 ) Protein Length:684aa
NCBI annotation:DNA helicase II
Pathway in KEGG:Nucleotide excision repair [PATH:las03420]
Mismatch repair [PATH:las03430]
Subsystem in SEED:DNA repair, bacterial UvrD and related helicases
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680----
MQQDDQKSHFSHILKGDFVPSCVPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVIGGSFYDRQEIRDALAYFRLVCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHETLEGFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDPSHTQEIIYDDIYGTFSEHWNQIPE
ccccccccccccccccccccccHHHHHHHccHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHcccccHHHEEEEcccHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccccccccEEEEEEcccccccccccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHccHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHccccHHHEEEEEccHHHHHHHHHHHHHccccEEEEcccHHccHHHHHHHHHHHHHccccccHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccEEEEEHHHHccccccEEEEEcccccccccHHcccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccccccccccHHHHccccHHHHHcccccccccccHHHHHccc
***********************PNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQS***EDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVIGGSFYDRQEIRDALAYFRLVCQEHRDEDFKRIINCPKRGIGKESLH************LLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHETLEGFVLQAPLRE********SNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDPSHT*********************
mqqddqkshfshilkgdfvpscvpnylkglnaqqthavtipddtpllilagagtgkttvliarmlhlichkeippskilamtftnqaiqemknrlacylgekipriqtfhsfcasilrkhgevvglptdfaildsaesrtiikqllkdlqiddkdydpheviekidywqnrgwnpkdipqssltedaeipkaiyiqyvaylqktkscdfggliiktievlhhphvlkkyhekipyimvdeyqdintpqylllrllcqkedskqgariccvgdenqciyewrgaqfshilnfqkdfkdaniikleqnyrstthilntanklishnkqrfdkklftqrdchddakvsihvsqsdnselstiiqeiiniqntgmslnniailvrtswqtrkfedafleqeiphkviggsfydrqeirdalayfrlvcqehrdedfkriincpkrgigkeslhkiqyhasqhhisllqaseklidsgqfrpqirqslqnfvkdirrwnncskkmdpapianmileqsgymamwknnksseksqerldnlrellsiiekhetlegfvlqaplrenlgsfipdsnciqimtlhaakglefdtvfisgweqgllphqlsinegnvegerrlayvgitrakkkchlfytinrrthdftrveryqpsqvsqfllelydpshtqeiiyddiygtfsehwnqipe
mqqddqkshfshilkgdfvpscvpnylkglnaqqthavtipddtpllilagagtgkttvliarmlhlichkeippskilamtftnqaiqemknrlacylgekipriqtfhsfcasilrkhgevvglptdfaildsaesrtiikqllkdlqiddkdydpheviekidywqnrgwnpkdipqssltedaeipkaiyiqyvaylqktkscdfggliiktievlhhphvlkkyhekipyimvdeyqdintpqylllrllcqkedskqgariccvgdenqciyewrgaqfshilnfqkdfkdaniikleqnyrstthilntanklishnkqrfdkklftqrdchddakvsihvsqsdnselstiiqeiiniqntgmslnniailvrtswqtrkfedafleqeiphkviggsfydrqeirdalayfrlvcqehrdedfkriincpkrgigkeslhkiqyhasqhhisllqaseklidsgqfrpqirqslqnfvkdirrwnncskkmdpapianmileqsgymamwknnksseksqerldnlrellsiiekhetlegfvlqaplrenlgsfipdsnciqimtlhaakglefdtvfisgweqgllphqlsinegnvegerrlayvgitrakkkchlfytinrrthdftrveryqpsqvsqfllelydpshtqeiiyddiygtfsehwnqipe
MQQDDQKSHFSHILKGDFVPSCVPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVIGGSFYDRQEIRDALAYFRLVCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHETLEGFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDPSHTQEIIYDDIYGTFSEHWNQIPE

Domain archietecture



Structure model(s) of the protein

model for region: 24-658
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