254780456

254780456

30S ribosomal protein S1

GeneID:8209443 Locus tag:CLIBASIA_01705
Protein GI in NCBI database:254780456 Protein Accession:YP_003064869.1
Gene range:- ( 373449 , 375179 ) Protein Length:575aa
NCBI annotation:30S ribosomal protein S1
Pathway in KEGG:Ribosome [PATH:las03010]
Subsystem in SEED:Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-----
MSFTNPSREDFATLLEESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTPIKVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVDSVSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINSFIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIKALEIAEEKGAVAQFGSSDSGASLGDILGMALKNRGNDAGDSNDNQ
cccccccHHHHHHHHHHHccccccccccEEEEEEEEEEccEEEEEEccccEEEEEHHHccccccccccccccEEEEEEEEEEccccEEEEEEEccccHHHHHHHHHHHccccEEEEEEEEEEcccEEEEEccHHHHccHHHcccccccccccccccEEEEEEEEEEccccEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEcccEEEEEEEEcccccccccHHHEEccccEEEEEEEEEEccccEEEEEEEccccccccccccccccccEEEEEEEEEEcccEEEEEcccEEEEEEEEEcccccEEccHHHHcccccEEEEEEEEEEccccEEEEEEEEcccccccccccccccccEEEEEEcccccccEEEEEccccEEEEEEEEcccccccccHHHEEccccEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEEEEEEEEccccEEEEEcccccEEEEEEHHHccccccccHHHEEccccEEEEEEEEEEccccEEEEEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHccccccccccc
************************AENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTPIKVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVDSVSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINSFIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIKALEI*****************************************
msftnpsredfatlleesftkkdlaencvtkgivvglekdtvvvdvglkfegriprrefmgkgqytpikvgdevevyvertensfgeavfsrdkalregvwekieakfrageriegvifnqvkggmtvdlngevaflprsqidirpvrdvtplmhepqlfeilkmdkrrgnivvsrravleesraeqrseivqkleegqviegtvknitdygvfvdlsgvdgllhvtdiawhrilhpskvlsigqqvkvkiirinqethrislgmkqleknpwddvqdkyvegskvsgvvtnltdygvfvelqsgieglahisqiswtkknihpskilsvgqqvevvilevnparkrislglkqalinpweefskshppgtevegevknktdfglfigldehldgmihlsdldwnrpgekviaeyakgdivkavvldidvgkerislgvkqlsgsapdvvdsvsslrkndvvscevisvseggievslidhkginsfirrsdlsrdrvdqdpgrfskgqivdacvvnvskkdgkvslsikaleiaeekgavaqfgssdsgaslgdilgmalknrgndagdsndnq
msftnpsredfatlleesftkkdlaencvtkgivvglekdtvvvdvglkfegriprrefmgkgqytpikvgdevevyvertensfgeavfsrdkalregvwekieakfrageriegvifnqvkggmtvdlngevaflprsqidirpvrdvtplmhepqlfeilkmdkrrgnivvsrravleesraeqrseivqkleegqviegtvknitdygvfvdlsgvdgllhvtdiawhrilhpskvlsigqqvkvkiirinqethrislgmkqleknpwddvqdkyvegskvsgvvtnltdygvfvelqsgieglahisqiswtkknihpskilsvgqqvevvilevnparkrislglkqalinpweefskshppgtevegevknktdfglfigldehldgmihlsdldwnrpgekviaeyakgdivkavvldidvgkerislgvkqlsgsapdvvdsvsslrkndvvscevisvseggievslidhkginsfirrsdlsrdrvdqdpgrfskgqivdacvvnvskkdgkvslsikaleiaeekgavaqfgssdsgaslgdilgmalknrgndagdsndnq
MSFTNPSREDFATLLEESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTPIKVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVDSVSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINSFIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIKALEIAEEKGAVAQFGSSDSGASLGDILGMALKNRGNDAGDSNDNQ

Domain archietecture




Structure model(s) of the protein

model for region: 25-108
model for region: 109-178,193-279
model for region: 280-446
model for region: 447-537

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