254780855

254780855

NADH dehydrogenase subunit D (EC 1.6.5.3)

GeneID:8209870 Locus tag:CLIBASIA_03750
Protein GI in NCBI database:254780855 Protein Accession:YP_003065268.1
Gene range:+ ( 824157 , 825347 ) Protein Length:395aa
NCBI annotation:NADH dehydrogenase subunit D
Pathway in KEGG:Oxidative phosphorylation [PATH:las00190]
Subsystem in SEED:Respiratory Complex I

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-----
MDKKKSRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDPKIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAPGYAHLQAMEFLCKGHQLADVSAILGSLDIVFGEVD
cccccccEEEEEcccccccccccEEEEEEEEccEEEEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccEEEccHHHHHHHccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccEEEEEEEEcccccEEEEEEccccHHHHHHHHHHHccccccHHHHHHHHccccccccc
********FTINFG*******GVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDPKIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAPGYAHLQAMEFLCKGHQLADVSAILGSLDIVFGEVD
mdkkksrsftinfgpqhpaahgvlrlileldgeivervdphigllhrgteklietktflqavpyfdrldyvapmnqehayalavekllgieipirgqlirvlyseigrilshllnvttqamdvgaltpplwgfeereklmvfyerasgsrmhaayfrpggvhqdippelvedigcwcdsfpsalndisdlltgnrifkqrnvnigtvkledawgwgfsgvmirgsgaawdlrksqpyecyseldfdipigkhgdcydrylvrmmemresvkiirqcvnrllgknkvgpvsasdpkivppkradmkrsmeslihhfklytegyhvpvgevyaaveapkgefgvylisdggnkpyrckirapgyahlqameflckghqladvsailgsldivfgevd
mdkkksrsftinfgpqhpaahgvlrlileldgeivervdphigllhrgteklietktflqavpyfdrldyvapmnqehayalavekllgieipirgqlirvlyseigrilshllnvttqamdvgaltpplwgfeereklmvfyerasgsrmhaayfrpggvhqdippelvedigcwcdsfpsalndisdlltgnrifkqrnvnigtvkledawgwgfsgvmirgsgaawdlrksqpyecyseldfdipigkhgdcydrylvrmmemresvkiirqcvnrllgknkvgpvsasdpkivppkradmkrsmeslihhfklytegyhvpvgevyaaveapkgefgvylisdggnkpyrckirapgyahlqameflckghqladvsailgsldivfgevd
MDKKKSRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDPKIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAPGYAHLQAMEFLCKGHQLADVSAILGSLDIVFGEVD

Domain archietecture




Structure model(s) of the protein

model for region: 3-396

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