254780608

254780608

ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)

GeneID:8209607 Locus tag:CLIBASIA_02475
Protein GI in NCBI database:254780608 Protein Accession:YP_003065021.1
Gene range:+ ( 667861 , 668901 ) Protein Length:345aa
NCBI annotation:ribosomal large subunit pseudouridine synthase C
Subsystem in SEED:Ribosome biogenesis bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MSLMTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNFTSPIQNKLYLHARYMDLPHPEGGRLQITAPLPAHMVKTWDSLGFKYDRNLYIKRLYSQDECKQNI
ccccccEEEEEEccccccccHHHHHHHHcccccHHHHHHHHHcccEEEccEEEccccccccccEEEEcccccccccccccccccccccccccccccccEEEEEccccEEEEEccccEEEcccccccccHHHHHHHHHHccccEEEEEccccccccEEEEEEccHHHHHHHHHHHHHccccEEEEEEEEccccccccEEEccHHccccccccEEEEEEEccccccccccEEEEEEEccccEEEEEEEEcccccHHHHHHHHHHcccEEccccccccccccccccccccHHHHHHHcEEEcccccEEEEEccccHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHc
********YVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNFTSPIQNKLYLHARYMDLPHPEGGRLQITAPLPAHMVKTWDSLGFKYDRN****************
mslmtyvqyvvvendeenmrldrwfknhyphinfvnlqkilrsgqvrvdkkrvkfnnriqsgqvvrippvinalnhiikeqkildssvnltkhsdflksillyedskiyvfnkpagisvqggsgiayhidgflkswvdskgqkprlthrldqetsgilvvartraaaqhltesfrmrriqkiywslvwgipknkkecianwllkkshiggdyvhvvkqnekganyaishfkvidcfaqkfcwlemqphtgrthqlrvhalhmgcpivgdhkycanfkgnftspiqnklylharymdlphpeggrlqitaplpahmvktwdslgfkydrnlyikrlysqdeckqni
mslmtyvqyvvvendeenmrldrwfknhyphinfvnlqkilrsgqvrvdkkrvkfnnriqsgqvvrippvinalnhiikeqkildssvnltkhsdflksillyedskiyvfnkpagisvqggsgiayhidgflkswvdskgqkprlthrldqetsgilvvartraaaqhltesfrmrriqkiywslvwgipknkkecianwllkkshiggdyvhvvkqnekganyaishfkvidcfaqkfcwlemqphtgrthqlrvhalhmgcpivgdhkycanfkgnftspiqnklylharymdlphpeggrlqitaplpahmvktwdslgfkydrnlyikrlysqdeckqni
MSLMTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNFTSPIQNKLYLHARYMDLPHPEGGRLQITAPLPAHMVKTWDSLGFKYDRNLYIKRLYSQDECKQNI

Domain archietecture



Structure model(s) of the protein

model for region: 2-68
model for region: 2-68
model for region: 9-75,91-329
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