254780810

254780810

transcription termination factor Rho

GeneID:8209816 Locus tag:CLIBASIA_03505
Protein GI in NCBI database:254780810 Protein Accession:YP_003065223.1
Gene range:+ ( 444702 , 445973 ) Protein Length:422aa
NCBI annotation:transcription termination factor Rho
Pathway in KEGG:RNA degradation [PATH:las03018]
Subsystem in SEED:Transcription factors bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MSEMKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNKQ
cccccHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccEEEcccEEEEEcccccccccccccccccccccEEcHHHHHHHHHccccEEEccccccccccEEEccEEEEcccccccHHHcccccccccccccccccccHHccccccccccHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccHHHHHccEEEEEEEEHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHc
***MKLQELKNKSPT*****************RKQELMFSILKVLSGRDVEIIGEGVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYS****
msemklqelknksptkllafaesleienanvmrkqelmfsilkvlsgrdveiigegvievlqdgfgflrspdanylagpddiyvspsqiksfslktgdtvegsirapregeryfallkvnainfdvpervrnkihfdnltplypdkrfnmelnnpenkdissrvidliapigkgqrslivapprtgktillqniahsikknhpecylivlliderpeevtdmqrsvqgevisstfdesaarhvqvaemviakakclveygldvvilldsitrlcraynvlmpssgkiltggvdanalqrpkrffgaarnikeggsltiigtalvdtgsrmdevifeefkgtgnseivlerkiadkrifpamdiiksgtrkedllverqdlqkvfmlrrivssmnssdaieflidklkqtkdnkdffysmnkq
msemklqelknksptkllafaesleienanvmrkqelmfsilkvlsgrdveiigegvievlqdgfgflrspdanylagpddiyvspsqiksfslktgdtvegsirapregeryfallkvnainfdvpervrnkihfdnltplypdkrfnmelnnpenkdissrvidliapigkgqrslivapprtgktillqniahsikknhpecylivlliderpeevtdmqrsvqgevisstfdesaarhvqvaemviakakclveygldvvilldsitrlcraynvlmpssgkiltggvdanalqrpkrffgaarnikeggsltiigtalvdtgsrmdevifeefkgtgnseivlerkiadkrifpamdiiksgtrkedllverqdlqkvfmlrrivssmnssdaieflidklkqtkdnkdffysmnkq
MSEMKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNKQ

Domain archietecture



Structure model(s) of the protein

model for region: 1-422
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