254780751

254780751

ribonuclease E

GeneID:8209756 Locus tag:CLIBASIA_03190
Protein GI in NCBI database:254780751 Protein Accession:YP_003065164.1
Gene range:+ ( 517904 , 520075 ) Protein Length:722aa
NCBI annotation:ribonuclease E
Pathway in KEGG:RNA degradation [PATH:las03018]
Subsystem in SEED:Bacterial Cell Division;
RNA processing and degradation, bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720--
MANKMLIDASHVEETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDRKNLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMKLLMPSYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIEDTALQTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMSRQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIELADKLFYIEKGSPVQALVNTGHKVGSDSQAPSYDKNIECVWQDEALLPIPKSESLEDIQDNIVSEESTGVIRKRRRRRRRRRPATDHHDAGVVSDVSSIQNVIDDSFDMYMEPSDITNHNLLENGAHGFTENYDVSIPPVSTPEMESSNSSSDPIVKKTRWWKRR
cccEEEEEEcccccEEEEEEEccEEEEEEEccccccccccEEEEEEEEEEcccccEEEEEEcccccEEEEEccccHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHcccccccccccccccHHHccccccccccccccccccccccHHHHHHHccccEEEEEEEEcccccccccccEEEEEcccEEEEccccccccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHccEEEcccccEEEEEccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEcccccccEEEEEEEcccccHHHHHccccccccccEEEEEHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHcccHHHHHHHHHHHccEEEEEEccccccccEEEEEccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccHHHEEccccccccHHHHccccccccccccccccccccccccccccccccHHcccHHHcc
MANKMLIDASHVEETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ****************************************************************************************CIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKIT******NLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMKLLMPSYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGR****HCIEDTALQTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMSRQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIELADKLFYIEKGSPVQALVN****************************************************************************************************************************************VKKTRWWKRR
mankmlidashveetrvvvlrdnrveeldfesehkkqikgniylakvtrvepslqaafvdyggnrhgflpfleihpdyyqipfsdrqallkesniaqtdseavaddvthgdvtipndhsleevapianfsqeteeesiisanndvvsnvedvkggspedvpkkfkrqyciqeviknrqillvqivkeergnkgaavttylslagrysvlmpntskgetisrkitnpvdrknlkeiarglevpagmgvilrtagasrtkieikrdfeylmrlwdnvrelalnsvaphlvyeegnlikrairdlyckdiseiivsgekgyreakdfmkllmpsyarivrqyedphpiffrsgievqldslhqtevtlpsrgyviinqtealvsidvnsgrstrehciedtalqtnleaaeeiarqlrlrdlaglivvdfidmeekknnrsvekklkeslkkdrarvqvgaisnfgllemsrqrirssvlesttkvctyckgagyirsqssvalsilrsveeyllqytahniivhthsdvvlyllnqkrativeyearfgvsinvvigieladklfyiekgspvqalvntghkvgsdsqapsydkniecvwqdeallpipkseslediqdnivseestgvirkrrrrrrrrrpatdhhdagvvsdvssiqnviddsfdmymepsditnhnllengahgftenydvsippvstpemessnsssdpivkktrwwkrr
mankmlidashveetrvvvlrdnrveeldfesehkkqikgniylakvtrvepslqaafvdyggnrhgflpfleihpdyyqipfsdrqallkesniaqtdseavaddvthgdvtipndhsleevapianfsqeteeesiisanndvvsnvedvkggspedvpkkfkrqyciqeviknrqillvqivkeergnkgaavttylslagrysvlmpntskgetisrkitnpvdrknlkeiarglevpagmgvilrtagasrtkieikrdfeylmrlwdnvrelalnsvaphlvyeegnlikrairdlyckdiseiivsgekgyreakdfmkllmpsyarivrqyedphpiffrsgievqldslhqtevtlpsrgyviinqtealvsidvnsgrstrehciedtalqtnleaaeeiarqlrlrdlaglivvdfidmeekknnrsvekklkeslkkdrarvqvgaisnfgllemsrqrirssvlesttkvctyckgagyirsqssvalsilrsveeyllqytahniivhthsdvvlyllnqkrativeyearfgvsinvvigieladklfyiekgspvqalvntghkvgsdsqapsydkniecvwqdeallpipkseslediqdnivseestgvirkrrrrrrrrrpatdhhdagvvsdvssiqnviddsfdmymepsditnhnllengahgftenydvsippvstpemessnsssdpivkktrwwkrr
MANKMLIDASHVEETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDRKNLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMKLLMPSYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIEDTALQTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMSRQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIELADKLFYIEKGSPVQALVNTGHKVGSDSQAPSYDKNIECVWQDEALLPIPKSESLEDIQDNIVSEESTGVIRKRRRRRRRRRPATDHHDAGVVSDVSSIQNVIDDSFDMYMEPSDITNHNLLENGAHGFTENYDVSIPPVSTPEMESSNSSSDPIVKKTRWWKRR

Domain archietecture



Structure model(s) of the protein

model for region: 1-83,163-576
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