254780342

254780342

ABC-type importer for proline/glycine betaine, substrate binding component

GeneID:8209327 Locus tag:CLIBASIA_01135
Protein GI in NCBI database:254780342 Protein Accession:YP_003064755.1
Gene range:- ( 238316 , 239245 ) Protein Length:308aa
NCBI annotation:substrate-binding region of ABC-type glycine betaine transport system
Pathway in KEGG:ABC transporters [PATH:las02010]
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MYKILAVCLFLTTFSISYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQDPSRQLERFMN
cHHHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHccccEEEccccccccHHHHHHHHHcccEEEEcccccccEEEEEEcHHHHHcccccHHHHHHHHHHccccEEcccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccEEEEEEEcccccccccccccHHHEEEcHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHc
MYKILAVCLFLTTFSISYA***DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQDPSRQLERFMN
mykilavclflttfsisyardadsctpvrfadtgwtdiaattamtsvileeilgyktnikllavpvtfrslknkgidifmgywypslekfiapyleegsiklvaenlqgakymlavndvgfalgiksyqdiakykkelgakiygiepgnegnqrildminnnkfslkgfrlieaselasfsqirrdqrnnipavflswephpinsdlnihylpggeeisgfgeasvytvvrsdyldkcpnisrllknikfsvalenemmklilnnkqdrqfvgrtmlrthpdllknwligvttfdgqdpsrqlerfmn
SSSSSSSSSSSSSSSSSSardadsctpvrfadtgwtdiaattamtsvileeilgyktnikllavpvtfrslknkgidifmgywypslekfiapyleegsiklvaenlqgakymlavndvgfalgiksyqdiakykkelgakiygiepgnegnqrildminnnkfslkgfrlieaselasfsqirrdqrnnipavflswephpinsdlnihylpggeeisgfgeasvytvvrsdyldkcpnisrllknikfsvalenemmklilnnkqdrqfvgrtmlrthpdllknwligvttfdgqdpsrqlerfmn
MYKILAVCLFLTTFSISYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQDPSRQLERFMN

Domain archietecture



Structure model(s) of the protein

model for region: 20-308
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