254780788

254780788

transcription elongation/termination factor NusA

GeneID:8209794 Locus tag:CLIBASIA_03395
Protein GI in NCBI database:254780788 Protein Accession:YP_003065201.1
Gene range:+ ( 471664 , 473244 ) Protein Length:525aa
NCBI annotation:transcription elongation factor NusA
Subsystem in SEED:NusA-TFII Cluster;
Transcription factors bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-----
MVSANRLELLQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGDISLFRLLEVVEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQSAKQVIIQKVREAERDRQYLEFKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEEDSINRQKDFNERTQFFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEGIDITLQKKIRELGVSEELCSIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYKMGWIEKEKVADEEVQDA
cccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEEEEEEEEEccccccccEEcHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccccEEEEEcccEEEEcHHHHccccccccccEEEEEEEEEEEcccccEEEEEEccHHHHHHHHHHcccHHcccEEEEEEEEccccccEEEEEEEccccccccccEEccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHccHHHccEEEEcccccEEEEEEcHHHHHHHHccccHHHHHHHHHcccEEEEEEHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccHHHHHHHHHcccccHHHHHcccHHHHccccccccccHHccccccccccccHHHHHHHHHHHHHHcccccHHHccccccccc
****NRLELLQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGDISLFRLLEVVEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQSAKQVIIQKVREAERDRQYLEFKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEED*********ERTQFFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEGIDI*******ELGVSEELCSIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYKMGWIEKE**********
mvsanrlellqiadavayeksidrdvvlsvmadsiqkaarslygtmsdirveinpetgdislfrllevveevenytcqislkvardrdpsidiggvvsdplppmdfgrvavqsakqviiqkvreaerdrqylefkdkvgeiisgtvkrveygnvivdlgnsdgvirrdetisrenlrpgdrvksyiydvrreqrgpqvllsrthpqfmvklfhmevpeiyngivqvkavsrdpgsraklavfssdssidpvgacvgmrgsrvqavvtelrdekidivvwspdsatfvinalrpaivtkvvldedvgrievivpkeqlslaigrrgqnvrlasqltgwtidiiteeedsinrqkdfnertqffmqainvdeiiahllvaegfadveelacvkiseiasiegfdeetaveiqgrareylegiditlqkkirelgvseelcsipgidskikvalgengiktmedlagcsvddllgwsenkggniekfdgflsslgtpkdqvesmiiharykmgwiekekvadeevqda
mvsanrlellqiadavayeksidrdvvlsvmadsiqkaarslygtmsdirveinpetgdislfrllevveevenytcqislkvardrdpsidiggvvsdplppmdfgrvavqsakqviiqkvreaerdrqylefkdkvgeiisgtvkrveygnvivdlgnsdgvirrdetisrenlrpgdrvksyiydvrreqrgpqvllsrthpqfmvklfhmevpeiyngivqvkavsrdpgsraklavfssdssidpvgacvgmrgsrvqavvtelrdekidivvwspdsatfvinalrpaivtkvvldedvgrievivpkeqlslaigrrgqnvrlasqltgwtidiiteeedsinrqkdfnertqffmqainvdeiiahllvaegfadveelacvkiseiasiegfdeetaveiqgrareylegiditlqkkirelgvseelcsipgidskikvalgengiktmedlagcsvddllgwsenkggniekfdgflsslgtpkdqvesmiiharykmgwiekekvadeevqda
MVSANRLELLQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGDISLFRLLEVVEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQSAKQVIIQKVREAERDRQYLEFKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEEDSINRQKDFNERTQFFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEGIDITLQKKIRELGVSEELCSIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYKMGWIEKEKVADEEVQDA

Domain archietecture



Structure model(s) of the protein

model for region: 6-347
model for region: 357-422
model for region: 430-474,492-515
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