254780991

254780991

excinuclease ABC subunit B

GeneID:8210013 Locus tag:CLIBASIA_04460
Protein GI in NCBI database:254780991 Protein Accession:YP_003065404.1
Gene range:- ( 986465 , 988882 ) Protein Length:804aa
NCBI annotation:excinuclease ABC subunit B
Pathway in KEGG:Nucleotide excision repair [PATH:las03420]
Subsystem in SEED:DNA repair, UvrABC system

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800----
MPKKTRSFPKKDSRIQSISTRVDDLDYFSFEEKQLEVDKTMVADAMRRIRSEAGKHRKNAAKRMLIHQRENTASKGEFQSQSSISMSEKQTREISEQTMTPSVQALARLIQSDNPLLKNGKIWTPHRSWSINNHSKDITFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLEDAATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADNLNFEEAARIRDEIKRLKSSPYFQGLDD
cccccccccccccEEccccEEEEEHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccHHHHHHHHHHHccccccccccHHHcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHcccccEEEEccHHHHcccccHHHHHHcEEEEEccccccHHHHHHHHHHcccEEccccccccEEEEEccEEEEEccccccccEEEEcccccEEHHEEEEcccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccHHHHHcccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHccccccccccEEEEcHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHcccccEEEEEcHHHcccccccccEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
*****************************************************************************************************************************************ITFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNINPQSVK******************************KKKGKAHLKSLRKQMHLAADNLNFEEAARIRDEI******PYF*****
mpkktrsfpkkdsriqsistrvddldyfsfeekqlevdktmvadamrrirseagkhrknaakrmlihqrentaskgefqsqssismsekqtreiseqtmtpsvqalarliqsdnpllkngkiwtphrswsinnhskditffqmqtdyhpsgdqpaaiaqllkgihsrekvqlllgvtgsgktftmakvieamqrpaivmapnkilaaqlysefknffphnaveyfvsyydyyqpeayvprtdtyiekessineqidrmrhsatrsllerndcivvssvsciygigsvesysqmivqlkigdsveqkellsslvkqqykrqdigiirgtfrvcgdsieifpshledvawrvsmfgndieeisefypltgqkirnvetikiyanshyvtprptlntamkyikeelkmrlielekegrlleaqrleqritydlemlettgscqsienysryltgrnpgeppptlfeyipedsllfvdeshvtipqisgmyrgdfhrkatlaeygfrlpscmdnrplrfeewnclrpttivvsatpgsweleqcqgiiveqiirptglvdppveirsartqvedvydeinlaaqqglrilltvltkrmaedlteylyernirvrymhsevktlerieiirdlrlgkfdvlvginllregldipecglvaildadkegflrsktsliqtigraarnvnskvilyadtitksiqlaidettrrrekqlehnkkhninpqsvkekimevidpilledaattnisidaqqlslskkkgkahlkslrkqmhlaadnlnfeeaarirdeikrlksspyfqgldd
mpkktrsfpkkdsriqsistrvddldyfsfeekqlevdktmvadamrrirseagkhrknaakrmlihqrentaskgefqsqssismsekqtreiseqtmtpsvqalarliqsdnpllkngkiwtphrswsinnhskditffqmqtdyhpsgdqpaaiaqllkgihsrekvqlllgvtgsgktftmakvieamqrpaivmapnkilaaqlysefknffphnaveyfvsyydyyqpeayvprtdtyiekessineqidrmrhsatrsllerndcivvssvsciygigsvesysqmivqlkigdsveqkellsslvkqqykrqdigiirgtfrvcgdsieifpshledvawrvsmfgndieeisefypltgqkirnvetikiyanshyvtprptlntamkyikeelkmrlielekegrlleaqrleqritydlemlettgscqsienysryltgrnpgeppptlfeyipedsllfvdeshvtipqisgmyrgdfhrkatlaeygfrlpscmdnrplrfeewnclrpttivvsatpgsweleqcqgiiveqiirptglvdppveirsartqvedvydeinlaaqqglrilltvltkrmaedlteylyernirvrymhsevktlerieiirdlrlgkfdvlvginllregldipecglvaildadkegflrsktsliqtigraarnvnskvilyadtitksiqlaidettrrrekqlehnkkhninpqsvkekimevidpilledaattnisidaqqlslskkkgkahlkslrkqmhlaadnlnfeeaarirdeikrlksspyfqgldd
MPKKTRSFPKKDSRIQSISTRVDDLDYFSFEEKQLEVDKTMVADAMRRIRSEAGKHRKNAAKRMLIHQRENTASKGEFQSQSSISMSEKQTREISEQTMTPSVQALARLIQSDNPLLKNGKIWTPHRSWSINNHSKDITFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLEDAATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADNLNFEEAARIRDEIKRLKSSPYFQGLDD

Domain archietecture




Structure model(s) of the protein

model for region: 139-796

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