254780784

254780784

polynucleotide phosphorylase/polyadenylase (EC 2.7.7.8)

GeneID:8209790 Locus tag:CLIBASIA_03375
Protein GI in NCBI database:254780784 Protein Accession:YP_003065197.1
Gene range:+ ( 477223 , 479322 ) Protein Length:698aa
NCBI annotation:polynucleotide phosphorylase/polyadenylase
Pathway in KEGG:Purine metabolism [PATH:las00230]
Pyrimidine metabolism [PATH:las00240]
RNA degradation [PATH:las03018]
Subsystem in SEED:Bacterial RNA-metabolizing Zn-dependent hydrolases
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------70
MFDVHTVEIEWAGRPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLTVNYQERTYAVGKIPGGYLRRESRPTENEILISRMIDRSIRPLFSKCYKNETQVIINVMQHDLESSPHVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQGSLDLFVSGTQDAVLMVELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMCAKEPIVIDSKDFSKLEEEMSQMIKEDLRVSCFIPEKYVRCKQIDDLKKKMVSYFSSEHSSWNEGEIVSVFEDIQAKVVRTVMLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSLSGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYTLRIVSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDHLGHMDFKVAGTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSESRLQLGEFTPRVEIMAIPPDQIRNVIGMGGKVIRGIVEQTGAKVNIDDDGTVKIASSSLAEIEAAREMIRSITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDDRGKIKLSMKVVDQNTGKPI
ccccEEEEEEEccEEEEEEEcccccccccEEEEEEcccEEEEEEEEccccccccccEEEEEEEccccHHcccccccccEEccccccHHHHHHHHHHccHHHcccccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHccccccccEEEEEEEEEccEEEEcccHHHHHccccEEEEEcccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccccccEEEEEEEccEEEEEEEEEcccccccccccccccccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccHHHcccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccEEEEEccccccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccEEEEEEEcHHHHHHHHccccHHHHHHHHHcccEEEEccccEEEEEEEHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccEEEEcccccEEEEEEEEccccccccHHHHcccccEEEEEEEEEcccccEEEEHHHccccccccc
*FDVHTVEIEWAGRPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLTVNYQERTYAVGKIPG*******RPTENEILISRMIDRSIRPLFSKCYKNETQVIINVMQHDLESSPHVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQGSLDLFVSGTQDAVLMVELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMCAKEPIVIDSKDFSKLEEEMSQMIKEDLRVSCFIPEKYVRCKQIDDLKKKMVSYFSSEHSSWNEGEIVSVFEDIQAKVVRTVMLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGT*************QRNDFMMHYNFLPCATGEVSRM*****REIGHGRLARRAIHPVLPQTAQFPYTLRIVSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDHLGHMDFKVAGTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLS**************************************************************************************************************************************************************
mfdvhtveiewagrplkletgriarqsdgavlatygetvvlatvvydrslkdgqdffpltvnyqertyavgkipggylrresrpteneilisrmidrsirplfskcyknetqviinvmqhdlessphvvsmvaasaalmlsglpfegpvvgaqvdyingqyvlnprldedqgsldlfvsgtqdavlmveleanqlsedvvldaiifghneckpvieaisklakmcakepividskdfskleeemsqmikedlrvscfipekyvrckqiddlkkkmvsyfssehsswnegeivsvfediqakvvrtvmldkkvrmdgrdsetvrdisaqvgllqrthgsslfirgdtqaivvvtlgtredeqyvdslsgtqrndfmmhynflpcatgevsrmgapsrreighgrlarraihpvlpqtaqfpytlrivseitesdgsssmatvcgsslalmdagvpiskpvagiamglvkdgddfiilsdisgdedhlghmdfkvagtdsgitamqmdmkiggisenimvmalqqakrgrlhilnemskvlsesrlqlgeftprveimaippdqirnvigmggkvirgiveqtgakvnidddgtvkiassslaeieaaremirsitdvpevnkiykgqvvkvmdfgafvhfcgardglvhisqlstervaktsdvvkegdtvwvklldfddrgkiklsmkvvdqntgkpi
mfdvhtveiewagrplkletgriarqsdgavlatygetvvlatvvydrslkdgqdffpltvnyqertyavgkipggylrresrpteneilisrmidrsirplfskcyknetqviinvmqhdlessphvvsmvaasaalmlsglpfegpvvgaqvdyingqyvlnprldedqgsldlfvsgtqdavlmveleanqlsedvvldaiifghneckpvieaisklakmcakepividskdfskleeemsqmikedlrvscfipekyvrckqiddlkkkmvsyfssehsswnegeivsvfediqakvvrtvmldkkvrmdgrdsetvrdisaqvgllqrthgsslfirgdtqaivvvtlgtredeqyvdslsgtqrndfmmhynflpcatgevsrmgapsrreighgrlarraihpvlpqtaqfpytlrivseitesdgsssmatvcgsslalmdagvpiskpvagiamglvkdgddfiilsdisgdedhlghmdfkvagtdsgitamqmdmkiggisenimvmalqqakrgrlhilnemskvlsesrlqlgeftprveimaippdqirnvigmggkvirgiveqtgakvnidddgtvkiassslaeieaaremirsitdvpevnkiykgqvvkvmdfgafvhfcgardglvhisqlstervaktsdvvkegdtvwvklldfddrgkiklsmkvvdqntgkpi
MFDVHTVEIEWAGRPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLKDGQDFFPLTVNYQERTYAVGKIPGGYLRRESRPTENEILISRMIDRSIRPLFSKCYKNETQVIINVMQHDLESSPHVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQGSLDLFVSGTQDAVLMVELEANQLSEDVVLDAIIFGHNECKPVIEAISKLAKMCAKEPIVIDSKDFSKLEEEMSQMIKEDLRVSCFIPEKYVRCKQIDDLKKKMVSYFSSEHSSWNEGEIVSVFEDIQAKVVRTVMLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSLSGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYTLRIVSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDHLGHMDFKVAGTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSESRLQLGEFTPRVEIMAIPPDQIRNVIGMGGKVIRGIVEQTGAKVNIDDDGTVKIASSSLAEIEAAREMIRSITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDDRGKIKLSMKVVDQNTGKPI

Domain archietecture



Structure model(s) of the protein

model for region: 1-696
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