254780896

254780896

ABC-type permease

GeneID:8209916 Locus tag:CLIBASIA_03965
Protein GI in NCBI database:254780896 Protein Accession:YP_003065309.1
Gene range:+ ( 871008 , 872063 ) Protein Length:350aa
NCBI annotation:ABC transporter membrane spanning protein (branched chain amino acid)
Pathway in KEGG:ABC transporters [PATH:las02010]
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE
ccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHc
****SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP*****
msifslrlnkyHHHHHHHHHHHHHHHHHHHHHtksqkyidsmgiqilHHHHHHHHHHHHHHHHHHHHHHHHiayaigaysyvilgsryglHHHHHHHHHHHHHHHHHHHHHHpslkfrHHHHHHHHHHHHHHHHHHHHHwkpitngkagiyvadrlyflgttvrslirffrfpssfviyHHHHHHHHHHHHHHHHHHHHHHrrtaisnawrtirdnqkaffslnttiHHHHHHHHHHHHHHHHHHHHHfaasrdrispdHHHHHHHHHHHHHHHHHHHHslskHHHHHHHHHHHHHHHHHHHHHHfnsllkfdcsfnHHHHHHHHHHHHHHHHHHHHHllrlrtpsnfle
msifslrlnkydkilcllavvyplllflflgatksqkyidsmgiqiliyvmfawglsivvgslgllslncviayaigaysyvilgsryglsiwllipvsamisgacgmimglpslkfrgdylaiatlimseifqnilikwkpitngkagiyvadrlyflgttvrslirffrfpssfviyeifmyyvllgmcflsasiilwlrrtaisnawrtirdnqkaffslnttiifaklsafavssafigmagaffaasrdrispdmfkfseniivisivilggmtslskiakatailigvvelccgmnfyyfnsllkfdcsfnmrhttlmvialflvilmrshsllrlrtpsnfle
MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE

Domain archietecture



Structure model(s) of the protein

Cannot get confident structure prediction for this protein.

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