254780916

254780916

transcriptional regulator and a receiptor in two component system

GeneID:8209936 Locus tag:CLIBASIA_04075
Protein GI in NCBI database:254780916 Protein Accession:YP_003065329.1
Gene range:+ ( 895380 , 896828 ) Protein Length:481aa
NCBI annotation:putative sigma-54-dependent transcription regulator protein
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-
MPRKKSLDRHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNIEVDS
ccccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEcHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHccccccccccccccccEEEccccEEEEEccccccHHHHHHHHHHHHccEEEEcccccEEEEEEEEEEEEcccHHHHHHcccccHHHHHHccccEEEEccHHHcHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccHHHcccccccccccccccccHHHccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHcccccc
**********KRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLL*************************DTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNIE***
mprkksldrhkrvliidkddeqikiikdhvesygydvfivnvsdlstiskiqvnviflslinceddkenilknivdkipivpiivqttqdnikilncflynriskfflnlvsrkqlcdsiicalregvvpsqenehcaldsliavspamiqvvdlarkagdcaipimiqgefgvgkkrlsrfihesgkraffpffivncgmidqdkiekflfgdvdlqtknsaqflgkfieanggtivleepdalplavqgriynfietgkieffdsrgairldvrliflteknllpqvkshvfrkdlyyrisvflinistlrsrsedipwlvhfflqsfctknaikqisisdkalslltkypwidnvqelknillraviglkdshltedrfvlllsregkkerefhtetactcytegkssdtildnlsqesipaigqdgevrrlsdiekeiiglamklyraqmsevarrlgigrstlyrkireynievds
mprkksldrhkrvliidkddeqikiikdhvesygydvfivnvsdlstiskiqvnviflslinceddkenilknivdkipivpiivqttqdnikilncflynriskfflnlvsrkqlcdsiicalregvvpsqenehcaldsliavspamiqvvdlarkagdcaipimiqgefgvgkkrlsrfihesgkraffpffivncgmidqdkiekflfgdvdlqtknsaqflgkfieanggtivleepdalplavqgriynfietgkieffdsrgairldvrliflteknllpqvkshvfrkdlyyrisvflinistlrsrsedipwlvhfflqsfctknaikqisisdkalslltkypwidnvqelknillraviglkdshltedrfvlllsregkkerefhtetactcytegkssdtildnlsqesipaigqdgevrrlsdiekeiiglamklyraqmsevarrlgigrstlyrkireynievds
MPRKKSLDRHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNIEVDS

Domain archietecture



Structure model(s) of the protein

model for region: 11-388
model for region: 430-478
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