254780277

254780277

DNA polymerase I

GeneID:8209259 Locus tag:CLIBASIA_00810
Protein GI in NCBI database:254780277 Protein Accession:YP_003064690.1
Gene range:+ ( 161960 , 164890 ) Protein Length:975aa
NCBI annotation:DNA polymerase I
Pathway in KEGG:Purine metabolism [PATH:las00230]
Pyrimidine metabolism [PATH:las00240]
DNA replication [PATH:las03030]
Base excision repair [PATH:las03410]
Nucleotide excision repair [PATH:las03420]
Homologous recombination [PATH:las03440]
Subsystem in SEED:DNA Repair Base Excision;
DNA-replication

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-----
MQKENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDAANIEPVVLDINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLFLERLQKLSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVLHRYGISMRGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERLDKPMIDVVSQMEITGIQIDQDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKTKTGQWKTTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLASTMTGRLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLYQVFENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEAADYIKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAINAPIQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSMEKACLPKINLRVPLKVNIKVSNNWQEE
cccccEEEEEEccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHccccEEEEcccccHHHHccccEEEEEccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccccccccHHHHHHHcccHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHcccccccccHHHcccccccHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccEEEccHHHHHHHHHHHHccccEEEEEEEcccccccccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHccccHHHccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccEEEEcccccccccccccHHHHHHHHEEcccccEEEEEEccHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEcccccEEEccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccHHHc
**KENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYD*****************************************************************SQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVLHRYGISMRGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERLDKPMIDVVSQMEITGIQIDQDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKT****WKTTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLASTMTGRLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLYQVFENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEAADYIKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAINAPIQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSMEKACLPKINLRVPLKVNIKVSNNWQEE
mqkenhlflvdgssfiyrafyatpllsrkhdglpvnaiagfcnmlwkllqnsrkesiashfavifdypavtfrneiypdykanrpkipemllpqlplvrlatqafgipaieiqgfeaddiiatytyiaekegfavtiistdkdlmqlvspttclydtvkeekidiehvikkwgippekmvclqaltgdsidnipgipgigyktaalllqeygnlenilinasrikqkkrrenileyaetarlsrklvmlrtdvpitiplehliledcngprlisflkaleftklinrvattydcdaaniepvvldinttenkgiaieteidrdttiktsqfsslsdqtskinseqtpqklflerlqklsqypinndsytkivntkdiqqwvqkletigsasfkiitdtmdafhskpiaiaistldqkddtsfkvetifidlsvhtsqdstgkntltkeilsylkkffenehflkighnikydklvlhrygismrgfedimlmsyvldsgrsshdiasiaqkwlsytrkeilksrkssipidkisdsqvqehaiensnvilqlwlllrpklivekllhvyerldkpmidvvsqmeitgiqidqdllkqvsaeisknllsleeniydlsgekfnlsspkqlgdilftklkfpsgaktktgqwkttaqdleqincgdnpiiknilewrqlskikstyadslpnhinkrtqrvhtfyslastmtgrlaslepnlqnipiktdlgqkirrafispptkklisadysqielrilahiakitplyqvfensldihrmvaaeifgvniekvspqmrrhaktinfsiiygispfrlatqlriprseaadyikryfhrfpgiheyiektknfvrqngyvetifgrrihydeinspkssirnineraainapiqgsaaditrramisvhksledhklatkmllqihdelvfevpeeeittasqiivhsmekaclpkinlrvplkvnikvsnnwqee
mqkenhlflvdgssfiyrafyatpllsrkhdglpvnaiagfcnmlwkllqnsrkesiashfavifdypavtfrneiypdykanrpkipemllpqlplvrlatqafgipaieiqgfeaddiiatytyiaekegfavtiistdkdlmqlvspttclydtvkeekidiehvikkwgippekmvclqaltgdsidnipgipgigyktaalllqeygnlenilinasrikqkkrrenileyaetarlsrklvmlrtdvpitiplehliledcngprlisflkaleftklinrvattydcdaaniepvvldinttenkgiaieteidrdttiktsqfsslsdqtskinseqtpqklflerlqklsqypinndsytkivntkdiqqwvqkletigsasfkiitdtmdafhskpiaiaistldqkddtsfkvetifidlsvhtsqdstgkntltkeilsylkkffenehflkighnikydklvlhrygismrgfedimlmsyvldsgrsshdiasiaqkwlsytrkeilksrkssipidkisdsqvqehaiensnvilqlwlllrpklivekllhvyerldkpmidvvsqmeitgiqidqdllkqvsaeisknllsleeniydlsgekfnlsspkqlgdilftklkfpsgaktktgqwkttaqdleqincgdnpiiknilewrqlskikstyadslpnhinkrtqrvhtfyslastmtgrlaslepnlqnipiktdlgqkirrafispptkklisadysqielrilahiakitplyqvfensldihrmvaaeifgvniekvspqmrrhaktinfsiiygispfrlatqlriprseaadyikryfhrfpgiheyiektknfvrqngyvetifgrrihydeinspkssirnineraainapiqgsaaditrramisvhksledhklatkmllqihdelvfevpeeeittasqiivhsmekaclpkinlrvplkvnikvsnnwqee
MQKENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDAANIEPVVLDINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLFLERLQKLSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVLHRYGISMRGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERLDKPMIDVVSQMEITGIQIDQDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKTKTGQWKTTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLASTMTGRLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLYQVFENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEAADYIKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAINAPIQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSMEKACLPKINLRVPLKVNIKVSNNWQEE

Domain archietecture




Structure model(s) of the protein

model for region: 3-290
model for region: 363-976

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