254780610

254780610

ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)

GeneID:8209609 Locus tag:CLIBASIA_02485
Protein GI in NCBI database:254780610 Protein Accession:YP_003065023.1
Gene range:- ( 665465 , 666487 ) Protein Length:339aa
NCBI annotation:RNA-pseudouridylate synthase protein, ribosomal large subunit D
Subsystem in SEED:Ribosome biogenesis bacterial
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE
ccccccccccEEEEEEccccccccHHHHHHHHHcccccHHHHHHHHHcccEEEccEEEcccccEEccccEEEEEccccccccccccccEEEEEEcccEEEEEEccccEEEccccccccccHHHHHHHHHHHHHccccccccEEEEEcccccccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccEEEEcccccccccccEEEEEEccccccccccccEEEEccccccccccEEEEEEEEcccccHHHHHHHHHHcccEEccccccccccccccccccccHHHHccccHHHHHHHHEEEEccccccEEEEEccccHHHHHHHHHHcc
**********************************E***********************************************IAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE
mqqtldncssikisllsdstaegridrwlatslkeqfsrsyvkililngfisingmvsknpnrkvvpgdsflitvpaaqklniaqenipldilyedddiivinkpaglvvhpapgnwtgtlvnallyhchnnlssingvkrpgivhrldkdttgvmvvakndlahqklseqfvdhgkstrlkrayyamvwgiplpdsgiinaplgrcksnrlrravkgiddktadsaithyqtieiynknsnfavsllkchletgrthqirvhmahkgnpligdplygkgfktkanivnnnaksailslarqalhahslsfshprnnqdmdfqvpipedmltvirklne
mqqtldncssikisllsdstaegridrwlatslkeqfsrsyvkililngfisingmvsknpnrkvvpgdsflitvpaaqklniaqenipldilyedddiivinkpaglvvhpapgnwtgtlvnallyhchnnlssingvkrpgivhrldkdttgvmvvakndlahqklseqfvdhgkstrlkrayyamvwgiplpdsgiinaplgrcksnrlrravkgiddktadsaithyqtieiynknsnfavsllkchletgrthqirvhmahkgnpligdplygkgfktkanivnnnaksailslarqalhahslsfshprnnqdmdfqvpipedmltvirklne
MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE

Domain archietecture



Structure model(s) of the protein

model for region: 13-339
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