254781210

254781210

major capsid protein

GeneID:8210235 Locus tag:CLIBASIA_05585
Protein GI in NCBI database:254781210 Protein Accession:YP_003065623.1
Gene range:- ( 1212108 , 1213139 ) Protein Length:342aa
NCBI annotation:hypothetical protein CLIBASIA_05585
sequencesequence profileraw resultsgenome browserNCBI geneNCBI protein

Prediction of Local Sequence Properties

scaler
Sequence
Secondary Structure
Disordered region
Transmembrane Helices
Signal Peptide
conservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
MATKEQLATANIYEFKKHVELALQETKSKLRPTVTEQATEGEASALVEVFKPTEAHEIVGDMPDTIYNATDQDRRWVGHSQFGWAERIDPFATLDSGINPLLPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIFRKRYIDVDSEQVYVLIPSDVWASLFALERATSKDYINTAALQAGKIEAFAGVWFINMEKVPGNDLFPAGTKFPGLIDGKVEYPNGKPTVKSSAKFEDTKIKYVLPIYCKSAVVFTQRKAIDVQHSKDPGKWHAPQITLTSSFGATRIEPDKILGIEISKDSLKGVPVLKGTKA
cccHHHHHHHHHHHHHccEEEEEHHHHHHHHHHHHHHccccccEEEEHHcccccHHHHHHccccHHccccccccEEEEEcccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEEcccEEccccccccccccccccccccEEEEEEcccccEEccccEEEEEEEccccccccEEcccccc
********TANIYEFKKHVELALQETKSKLRPTVTEQATEGEASALVEVFKPTEAHEIVGDMPDTIYNATDQDRRWVGHSQFGWAERIDPFATLDSGINPLLPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIFRKRYIDVDSEQVYVLIPSDVWASLFALERATSKDYINTAALQAGKIEAFAGVWFINMEKVPGNDLFPAGTKFPGLIDGKVEYPNGKPTVKSSAKFEDTKIKYVLPIYCKSAVVFTQRKAIDVQHSKDPGKWHAPQITLTSSFGATRIEPDKIL*******SLKGVPVLKG***
matkeqlataniyefkkhvelalqetksklrptvteqategeasalvevfkpteaheivgdmpdtiynatdqdrrwvghsqfgwaeridpfatldsginpllpyaslataamhrkqdeailkgmlgvnkkgkigaeteffskenilsavegddffktfigqlitaksifrkryidvdseqvyvlipsdvwaslfaleratskdyintaalqagkieafagvwfinmekvpgndlfpagtkfpglidgkveypngkptvkssakfedtkikyvlpiycksavvftqrkaidvqhskdpgkwhapqitltssfgatriepdkilgieiskdslkgvpvlkgtka
matkeqlataniyefkkhvelalqetksklrptvteqategeasalvevfkpteaheivgdmpdtiynatdqdrrwvghsqfgwaeridpfatldsginpllpyaslataamhrkqdeailkgmlgvnkkgkigaeteffskenilsavegddffktfigqlitaksifrkryidvdseqvyvlipsdvwaslfaleratskdyintaalqagkieafagvwfinmekvpgndlfpagtkfpglidgkveypngkptvkssakfedtkikyvlpiycksavvftqrkaidvqhskdpgkwhapqitltssfgatriepdkilgieiskdslkgvpvlkgtka
MATKEQLATANIYEFKKHVELALQETKSKLRPTVTEQATEGEASALVEVFKPTEAHEIVGDMPDTIYNATDQDRRWVGHSQFGWAERIDPFATLDSGINPLLPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIFRKRYIDVDSEQVYVLIPSDVWASLFALERATSKDYINTAALQAGKIEAFAGVWFINMEKVPGNDLFPAGTKFPGLIDGKVEYPNGKPTVKSSAKFEDTKIKYVLPIYCKSAVVFTQRKAIDVQHSKDPGKWHAPQITLTSSFGATRIEPDKILGIEISKDSLKGVPVLKGTKA

Domain archietecture



Structure model(s) of the protein

model for region: 9-329
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