| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0272 |
All predicted COG clusters |
|---|---|---|---|
| 1g003452m | 819 | hhsearch probability: 91.58 Identity: 21% subject length: 667 Length of aligned reigon: 52 Coverage over query: 435-489 Coverage over subject: 595-655 |
COG0474, MgtA Cation transport ATPase [Inorganic ion transport and metabolism] COG2216, KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] COG2217, ZntA Cation transport ATPase [Inorganic ion transport and metabolism] COG4087, Soluble P-type ATPase [General function prediction only] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only] COG0546, Gph Predicted phosphatases [General function prediction only] COG4030, Uncharacterized protein conserved in archaea [Function unknown] COG3769, Predicted hydrolase (HAD superfamily) [General function prediction only] COG4359, Uncharacterized conserved protein [Function unknown] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g001045m | 1176 | hhsearch probability: 95.73 Identity: 22% subject length: 667 Length of aligned reigon: 155 Coverage over query: 979-1162 Coverage over subject: 109-292 |
COG1782, Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] COG1236, YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] COG1234, ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG1235, PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] COG5212, PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] COG0426, FpaA Uncharacterized flavoproteins [Energy production and conversion] COG0491, GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] COG2333, ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] COG2248, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] |
| 1g044162m | 369 | hhsearch probability: 94.74 Identity: 16% subject length: 667 Length of aligned reigon: 57 Coverage over query: 313-369 Coverage over subject: 593-650 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG0546, Gph Predicted phosphatases [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG5275, BRCT domain type II [General function prediction only] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] |
| 1g009150m | 542 | hhsearch probability: 94.25 Identity: 17% subject length: 667 Length of aligned reigon: 72 Coverage over query: 394-466 Coverage over subject: 593-665 |
COG1246, ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] COG0456, RimI Acetyltransferases [General function prediction only] COG3153, Predicted acetyltransferase [General function prediction only] COG3393, Predicted acetyltransferase [General function prediction only] COG2153, ElaA Predicted acyltransferase [General function prediction only] COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] COG1670, RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] COG3053, CitC Citrate lyase synthetase [Energy production and conversion] COG0454, WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] COG2388, Predicted acetyltransferase [General function prediction only] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG3981, Predicted acetyltransferase [General function prediction only] COG4552, Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] COG1243, ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5628, Predicted acetyltransferase [General function prediction only] COG3818, Predicted acetyltransferase, GNAT superfamily [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g038256m | 691 | hhsearch probability: 90.30 Identity: 22% subject length: 667 Length of aligned reigon: 72 Coverage over query: 481-559 Coverage over subject: 593-664 |
COG5141, PHD zinc finger-containing protein [General function prediction only] COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG5152, Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] COG5222, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g001785m | 1013 | hhsearch probability: 93.84 Identity: 16% subject length: 667 Length of aligned reigon: 74 Coverage over query: 900-1003 Coverage over subject: 593-666 |
COG5141, PHD zinc finger-containing protein [General function prediction only] COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG5222, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG5152, Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g035374m | 66 | hhsearch probability: 94.20 Identity: 26% subject length: 667 Length of aligned reigon: 27 Coverage over query: 36-62 Coverage over subject: 514-540 |
COG0258, Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] |
| 1g003386m | 824 | hhsearch probability: 95.21 Identity: 21% subject length: 667 Length of aligned reigon: 73 Coverage over query: 320-392 Coverage over subject: 593-666 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] |
| 1g004008m | 779 | hhsearch probability: 94.97 Identity: 21% subject length: 667 Length of aligned reigon: 71 Coverage over query: 275-345 Coverage over subject: 593-664 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g003873m | 790 | hhsearch probability: 99.71 Identity: 40% subject length: 667 Length of aligned reigon: 75 Coverage over query: 203-278 Coverage over subject: 593-667 |
COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0714, MoxR-like ATPases [General function prediction only] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG1466, HolA DNA polymerase III, delta subunit [DNA replication, recombination, and repair] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG1485, Predicted ATPase [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] |
| 1g003867m | 790 | hhsearch probability: 99.71 Identity: 40% subject length: 667 Length of aligned reigon: 75 Coverage over query: 203-278 Coverage over subject: 593-667 |
COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0714, MoxR-like ATPases [General function prediction only] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG1466, HolA DNA polymerase III, delta subunit [DNA replication, recombination, and repair] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG1485, Predicted ATPase [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] |
| 1g001083m | 1160 | hhsearch probability: 97.84 Identity: 21% subject length: 667 Length of aligned reigon: 73 Coverage over query: 656-728 Coverage over subject: 593-666 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g033363m | 121 | hhsearch probability: 91.45 Identity: 21% subject length: 667 Length of aligned reigon: 24 Coverage over query: 71-94 Coverage over subject: 541-564 |
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG0122, AlkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG1194, MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair] COG1059, Thermostable 8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g001089m | 1159 | hhsearch probability: 97.85 Identity: 21% subject length: 667 Length of aligned reigon: 73 Coverage over query: 655-727 Coverage over subject: 593-666 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g005331m | 702 | hhsearch probability: 95.85 Identity: 20% subject length: 667 Length of aligned reigon: 176 Coverage over query: 245-444 Coverage over subject: 109-317 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g001082m | 1160 | hhsearch probability: 97.76 Identity: 21% subject length: 667 Length of aligned reigon: 73 Coverage over query: 656-728 Coverage over subject: 593-666 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g006003m | 665 | hhsearch probability: 96.63 Identity: 21% subject length: 667 Length of aligned reigon: 195 Coverage over query: 245-470 Coverage over subject: 109-336 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g003632m | 806 | hhsearch probability: 96.90 Identity: 18% subject length: 667 Length of aligned reigon: 193 Coverage over query: 453-668 Coverage over subject: 109-337 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g003762m | 797 | hhsearch probability: 96.97 Identity: 17% subject length: 667 Length of aligned reigon: 173 Coverage over query: 453-640 Coverage over subject: 109-317 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g002803m | 879 | hhsearch probability: 97.74 Identity: 21% subject length: 667 Length of aligned reigon: 195 Coverage over query: 245-471 Coverage over subject: 109-337 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] |
| 1g009281m | 538 | hhsearch probability: 94.27 Identity: 18% subject length: 667 Length of aligned reigon: 49 Coverage over query: 256-313 Coverage over subject: 513-561 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g004212m | 768 | hhsearch probability: 96.74 Identity: 17% subject length: 667 Length of aligned reigon: 173 Coverage over query: 453-640 Coverage over subject: 109-317 |
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g015933m | 398 | hhsearch probability: 95.37 Identity: 18% subject length: 667 Length of aligned reigon: 84 Coverage over query: 254-347 Coverage over subject: 479-564 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g012862m | 455 | hhsearch probability: 94.97 Identity: 19% subject length: 667 Length of aligned reigon: 80 Coverage over query: 254-343 Coverage over subject: 479-560 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] |
| 1g012847m | 455 | hhsearch probability: 94.97 Identity: 19% subject length: 667 Length of aligned reigon: 80 Coverage over query: 254-343 Coverage over subject: 479-560 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] |
| 1g009303m | 538 | hhsearch probability: 94.51 Identity: 18% subject length: 667 Length of aligned reigon: 49 Coverage over query: 256-313 Coverage over subject: 513-561 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g000734m | 1324 | hhsearch probability: 96.04 Identity: 18% subject length: 667 Length of aligned reigon: 72 Coverage over query: 8-81 Coverage over subject: 593-665 |
COG5034, TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] COG5141, PHD zinc finger-containing protein [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g009742m | 527 | hhsearch probability: 94.29 Identity: 18% subject length: 667 Length of aligned reigon: 49 Coverage over query: 245-302 Coverage over subject: 513-561 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g010406m | 511 | hhsearch probability: 95.23 Identity: 20% subject length: 667 Length of aligned reigon: 15 Coverage over query: 384-398 Coverage over subject: 630-644 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g012388m | 464 | hhsearch probability: 95.32 Identity: 19% subject length: 667 Length of aligned reigon: 83 Coverage over query: 254-346 Coverage over subject: 479-563 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g048640m | 954 | hhsearch probability: 95.62 Identity: 14% subject length: 667 Length of aligned reigon: 73 Coverage over query: 97-172 Coverage over subject: 593-666 |
COG0389, DinP Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] |
| 1g012081m | 471 | hhsearch probability: 91.91 Identity: 18% subject length: 667 Length of aligned reigon: 71 Coverage over query: 198-270 Coverage over subject: 593-666 |
COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g000959m | 1208 | hhsearch probability: 93.91 Identity: 17% subject length: 667 Length of aligned reigon: 63 Coverage over query: 1142-1208 Coverage over subject: 593-655 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG5275, BRCT domain type II [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g011171m | 492 | hhsearch probability: 97.96 Identity: 22% subject length: 667 Length of aligned reigon: 69 Coverage over query: 1-69 Coverage over subject: 595-664 |
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG5152, Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5194, APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] COG5219, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG5222, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] |
| 1g017048m | 378 | hhsearch probability: 93.24 Identity: 19% subject length: 667 Length of aligned reigon: 70 Coverage over query: 198-269 Coverage over subject: 593-665 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g002240m | 948 | hhsearch probability: 91.41 Identity: 13% subject length: 667 Length of aligned reigon: 72 Coverage over query: 827-907 Coverage over subject: 593-665 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g039039m | 398 | hhsearch probability: 97.92 Identity: 13% subject length: 667 Length of aligned reigon: 71 Coverage over query: 313-383 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] COG4996, Predicted phosphatase [General function prediction only] COG5275, BRCT domain type II [General function prediction only] COG0546, Gph Predicted phosphatases [General function prediction only] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] COG2503, Predicted secreted acid phosphatase [General function prediction only] |
| 1g000879m | 1239 | hhsearch probability: 97.22 Identity: 18% subject length: 667 Length of aligned reigon: 71 Coverage over query: 20-92 Coverage over subject: 593-664 |
COG5034, TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5141, PHD zinc finger-containing protein [General function prediction only] COG5275, BRCT domain type II [General function prediction only] |
| 1g001761m | 1017 | hhsearch probability: 96.98 Identity: 14% subject length: 667 Length of aligned reigon: 72 Coverage over query: 98-170 Coverage over subject: 593-665 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g035625m | 954 | hhsearch probability: 92.92 Identity: 13% subject length: 667 Length of aligned reigon: 67 Coverage over query: 367-433 Coverage over subject: 593-666 |
COG3831, Uncharacterized conserved protein [Function unknown] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g035092m | 73 | hhsearch probability: 97.16 Identity: 23% subject length: 667 Length of aligned reigon: 56 Coverage over query: 8-63 Coverage over subject: 514-575 |
COG0258, Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] |
| 1g002242m | 948 | hhsearch probability: 91.63 Identity: 17% subject length: 667 Length of aligned reigon: 71 Coverage over query: 707-793 Coverage over subject: 593-665 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g002032m | 977 | hhsearch probability: 90.81 Identity: 10% subject length: 667 Length of aligned reigon: 72 Coverage over query: 749-821 Coverage over subject: 593-665 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g001926m | 995 | hhsearch probability: 97.46 Identity: 19% subject length: 667 Length of aligned reigon: 73 Coverage over query: 903-979 Coverage over subject: 593-665 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] |
| 1g002369m | 930 | hhsearch probability: 95.17 Identity: 15% subject length: 667 Length of aligned reigon: 73 Coverage over query: 717-790 Coverage over subject: 593-666 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g000897m | 1234 | hhsearch probability: 97.21 Identity: 19% subject length: 667 Length of aligned reigon: 72 Coverage over query: 1142-1217 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG4996, Predicted phosphatase [General function prediction only] |
| 1g041302m | 484 | hhsearch probability: 97.74 Identity: 18% subject length: 667 Length of aligned reigon: 72 Coverage over query: 378-452 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG4996, Predicted phosphatase [General function prediction only] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] |
| 1g041003m | 282 | hhsearch probability: 98.10 Identity: 14% subject length: 667 Length of aligned reigon: 72 Coverage over query: 191-266 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG0546, Gph Predicted phosphatases [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] |
| 1g002143m | 960 | hhsearch probability: 97.52 Identity: 19% subject length: 667 Length of aligned reigon: 73 Coverage over query: 868-944 Coverage over subject: 593-665 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g002145m | 960 | hhsearch probability: 97.52 Identity: 19% subject length: 667 Length of aligned reigon: 73 Coverage over query: 868-944 Coverage over subject: 593-665 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG4996, Predicted phosphatase [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g000938m | 1218 | hhsearch probability: 97.43 Identity: 19% subject length: 667 Length of aligned reigon: 72 Coverage over query: 1126-1201 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG4996, Predicted phosphatase [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g045112m | 296 | hhsearch probability: 92.05 Identity: 24% subject length: 667 Length of aligned reigon: 38 Coverage over query: 70-107 Coverage over subject: 9-47 |
COG2888, Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis] COG2051, RPS27A Ribosomal protein S27E [Translation, ribosomal structure and biogenesis] COG5349, Uncharacterized protein conserved in bacteria [Function unknown] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g009146m | 542 | hhsearch probability: 97.78 Identity: 24% subject length: 667 Length of aligned reigon: 72 Coverage over query: 56-131 Coverage over subject: 593-665 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g017612m | 368 | hhsearch probability: 98.65 Identity: 32% subject length: 667 Length of aligned reigon: 85 Coverage over query: 190-276 Coverage over subject: 481-569 |
COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| 1g037230m | 815 | hhsearch probability: 98.97 Identity: 28% subject length: 667 Length of aligned reigon: 72 Coverage over query: 188-264 Coverage over subject: 593-666 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG3831, Uncharacterized conserved protein [Function unknown] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g041647m | 216 | hhsearch probability: 96.50 Identity: 30% subject length: 667 Length of aligned reigon: 37 Coverage over query: 71-107 Coverage over subject: 533-569 |
COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| 1g041319m | 296 | hhsearch probability: 97.60 Identity: 19% subject length: 667 Length of aligned reigon: 68 Coverage over query: 1-68 Coverage over subject: 596-664 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG5275, BRCT domain type II [General function prediction only] |
| 1g036523m | 387 | hhsearch probability: 98.29 Identity: 19% subject length: 667 Length of aligned reigon: 72 Coverage over query: 299-371 Coverage over subject: 593-664 |
COG5190, FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5275, BRCT domain type II [General function prediction only] COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] COG4996, Predicted phosphatase [General function prediction only] COG0546, Gph Predicted phosphatases [General function prediction only] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] COG2503, Predicted secreted acid phosphatase [General function prediction only] |
| 1g033679m | 113 | hhsearch probability: 98.07 Identity: 17% subject length: 667 Length of aligned reigon: 72 Coverage over query: 19-93 Coverage over subject: 593-664 |
COG5275, BRCT domain type II [General function prediction only] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |