T0410
lipoxygenase domain of human arachidonate 12-lipoxygenase, 12S-type (ALOX12A) from Homo sapiens
Target sequence:
>T0410 ALOX12A, Homo sapiens, 541 residues
MHHHHHHSSGVDLGTENLDFEWTLKAGALEMALKRVYTLLSSWNCLEDFDQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGMEELRAQLEKELQNGSLFEADFILLDGIPANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPPNPSSPTPTLFLPSDPPLAWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGLLGLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKEKYFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDWPYEYLKPSCIENSVTSDSKGGYGSEFELRRQACGRTRAPPPPPLRSGC
Structure:
Determined by:
SGC
PDB ID: 3d3l
Cartoon diagram of 410: 3d3l chain A
The truncated target structure N-terminus (a His tag replaces the first 171 residues of the protein) displaces an interior helix (residues 395-421) that covers the active site in available templates. The target N-terminus forms a helix that lies perpendicular to the interior template helix (missing in the target) and covers a hydrophobic patch formed by three adjacent helices, suggesting its position is an artifact of the missing target N-terminus. Furthermore, the altered target structure disrupts the coordination of an active site Fe by the C-terminal carboxylate of templates, (the C-terminal residue is missing in the target). Please see the PyMOL of superpostion of the target PDB 3d3l and the template PDB 1lox for visualization (template residues missing in target are magenta; Fe is in orange sphere; C-terminal template Fe coordinating residue is in stick; target N-terminus is salmon; template N-terminus is slate; hydrophobic patch is white, with stick representation).
Domains: PyMOL of domains
Two domain protein, first domain: seq 22-69,201-508, pdb 176-223,355-662; second domain: seq 70-200, pdb 224-354. We use whole chain for evaluation.
Correlation between weighted by the number of residues sum of GDT-TS scores for domain-based evlatuation (y, vertical axis)
and whole chain GDT-TS (x, horizontal axis).
To compute the weighted sum, GDT-TS for each domain was multiplied by the domain length, and this sum was divided by the sum of domain lengths. Each point represents first server model. Green, gray and black points are top 10, bottom 25% and the rest of prediction models. Blue line is the best-fit slope line (intersection 0) to the top 10 server models. Red line is the diagonal. Slope and root mean square y-x distance for the top 10 models (average difference between the weighted sum of domain GDT-TS scores and the whole chain GDT-TS score) are shown above the plot.
Structure classification:
Lipoxigenase fold.
CASP category:
Whole chain: Comparative modeling:easy.
1st domain: Comparative modeling:easy. 2nd domain: Comparative modeling:easy.
Closest templates:
Target sequence - PDB file inconsistencies:
T0410 3d3l.pdb T0410.pdb PyMOL PyMOL of domains
T0410 1 MHHHHHHSSGVDLGTENLDFEWTLKAGALEMALKRVYTLLSSWNCLEDFDQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGMEELRAQLEKELQNGSLFEADFILLDGIPANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPPNPSSPTPTLFLPSDPPLAWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGLLGLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKEKYFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDWPYEYLKPSCIENSVTSDSKGGYGSEFELRRQACGRTRAPPPPPLRSGC 541 ~~~~~~~~~~~~~~~~~~~~~|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~~||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~~~~~~~~~~~~~~~~~~~~~~~~||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3d3lA 176 ---------------------WTLKAGALEMALKRVYTLLSSWNCLEDFDQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGMEELRAQLEKELQNGSLFEADFILLDGIPA-----EKQYLAAPLVMLKMEPNGKLQPMVIQIQPPNPSSPTPTLFLPSDPPLAWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRY---------------------------GGHVQLLRRAAAQLTYCSLCPPDDLADRGLLGLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMATVMGSLPDVRQACLQMAISWHLS----DMVPLGHHKEKYFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDWPYEYLKPSCIENSVT--------------------------------- 662
We suggest to evaluate this target as a single domain spanning whole chain. However, evolutionarily this is a 2-domain protein:
1st domain: target 22-69, 201-241, 269-444, 449-508 ; pdb 176-223, 355-395, 423-598, 603-662
2nd domain: target 70-132, 138-200 ; pdb 224-286, 292-354
Sequence classification:
Lipoxigenase family in Pfam.
Server predictions:
T0410:pdb 176-662:seq 22-508:CM_easy;   alignment
First models for T0410:
Gaussian kernel density estimation
for GDT-TS scores of the
first server models, plotted at various bandwidths (=standard deviations).
The GDT-TS scores are shown as a spectrum along
the horizontal axis: each bar represents first server model. The bars are
colored
green, gray and black for top 10, bottom 25% and the rest of servers.
The family of curves with varying
bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units
with a step of 0.1, which corresponds to the
color ramp from magenta through blue to cyan. Thicker curves: red,
yellow-framed brown and black, correspond to bandwidths 1, 2 and 4
respectively.
410_1:pdb 176-223,355-662:seq 22-69,201-508:CM_easy;   alignment
First models for T0410_1:
Gaussian kernel density estimation
for GDT-TS scores of the
first server models, plotted at various bandwidths (=standard deviations).
The GDT-TS scores are shown as a spectrum along
the horizontal axis: each bar represents first server model. The bars are
colored
green, gray and black for top 10, bottom 25% and the rest of servers.
The family of curves with varying
bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units
with a step of 0.1, which corresponds to the
color ramp from magenta through blue to cyan. Thicker curves: red,
yellow-framed brown and black, correspond to bandwidths 1, 2 and 4
respectively.
410_2:pdb 224-354:seq 70-200:CM_easy;   alignment
First models for T0410_2:
Gaussian kernel density estimation
for GDT-TS scores of the
first server models, plotted at various bandwidths (=standard deviations).
The GDT-TS scores are shown as a spectrum along
the horizontal axis: each bar represents first server model. The bars are
colored
green, gray and black for top 10, bottom 25% and the rest of servers.
The family of curves with varying
bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units
with a step of 0.1, which corresponds to the
color ramp from magenta through blue to cyan. Thicker curves: red,
yellow-framed brown and black, correspond to bandwidths 1, 2 and 4
respectively.
click on a score in the table below to display the model in PyMOL
# | GROUP ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | TS ↓ | TR ↓ | CS ↓ | ↓ GROUP | # |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T0410 | 410_1 | 410_2 | T0410 | 410_1 | 410_2 | T0410 | 410_1 | 410_2 | T0410 | 410_1 | 410_2 | ||||||||||||||||||||||||||||
First score | First Z-score | Best score | Best Z-score | ||||||||||||||||||||||||||||||||||||
1 | MULTICOM−CLUSTER | 89.36 | 85.07 | 87.26 | 87.31 | 83.61 | 83.81 | 96.23 | 94.78 | 93.89 | 0.89 | 0.48 | 0.76 | 1.13 | 0.79 | 0.89 | 0.60 | 0.74 | 0.54 | 89.36 | 85.96 | 87.26 | 87.31 | 83.61 | 84.03 | 96.23 | 94.78 | 94.07 | 0.84 | 0.43 | 0.70 | 1.13 | 0.56 | 0.86 | 0.45 | 0.56 | 0.40 | MULTICOM−CLUSTER | 1 |
2 | MULTICOM−REFINE | 88.80 | 85.00 | 87.11 | 86.61 | 79.54 | 83.61 | 95.44 | 93.32 | 93.81 | 0.77 | 0.47 | 0.73 | 0.94 | 0.85 | 0.47 | 0.52 | 0.53 | 89.08 | 86.34 | 87.22 | 87.31 | 84.05 | 83.74 | 95.83 | 94.31 | 94.15 | 0.76 | 0.52 | 0.69 | 1.13 | 0.69 | 0.76 | 0.35 | 0.46 | 0.42 | MULTICOM−REFINE | 2 | |
3 | Phyre_de_novo | 88.75 | 86.34 | 87.09 | 86.31 | 85.18 | 83.34 | 96.03 | 94.84 | 94.20 | 0.76 | 0.69 | 0.72 | 0.86 | 1.14 | 0.79 | 0.57 | 0.75 | 0.60 | 88.75 | 86.34 | 87.09 | 86.31 | 85.18 | 83.34 | 96.03 | 94.84 | 94.20 | 0.67 | 0.52 | 0.64 | 0.77 | 1.02 | 0.63 | 0.40 | 0.57 | 0.44 | Phyre_de_novo | 3 |
4 | HHpred5 | 88.36 | 87.25 | 86.94 | 86.23 | 84.80 | 83.30 | 95.44 | 94.11 | 94.16 | 0.68 | 0.85 | 0.69 | 0.84 | 1.05 | 0.78 | 0.47 | 0.64 | 0.59 | 88.36 | 87.25 | 86.94 | 86.23 | 84.80 | 83.30 | 95.44 | 94.11 | 94.16 | 0.56 | 0.73 | 0.59 | 0.75 | 0.90 | 0.62 | 0.26 | 0.42 | 0.42 | HHpred5 | 4 |
5 | METATASSER | 88.36 | 85.59 | 87.59 | 86.23 | 81.82 | 84.15 | 96.03 | 93.78 | 94.00 | 0.68 | 0.57 | 0.82 | 0.84 | 0.38 | 0.97 | 0.57 | 0.59 | 0.56 | 88.47 | 86.51 | 87.59 | 86.54 | 84.95 | 84.15 | 96.03 | 93.78 | 94.00 | 0.59 | 0.56 | 0.81 | 0.86 | 0.95 | 0.90 | 0.40 | 0.35 | 0.38 | METATASSER | 5 |
6 | MULTICOM−CMFR | 88.19 | 86.49 | 85.20 | 86.31 | 82.61 | 80.62 | 95.24 | 93.12 | 93.75 | 0.64 | 0.72 | 0.35 | 0.86 | 0.56 | 0.16 | 0.44 | 0.49 | 0.52 | 88.86 | 86.49 | 87.15 | 86.61 | 83.10 | 83.50 | 95.83 | 94.64 | 94.16 | 0.70 | 0.55 | 0.66 | 0.88 | 0.41 | 0.69 | 0.35 | 0.53 | 0.42 | MULTICOM−CMFR | 6 |
7 | MUProt | 88.08 | 81.36 | 85.87 | 86.00 | 74.77 | 81.66 | 95.64 | 93.52 | 93.78 | 0.62 | 0.48 | 0.78 | 0.40 | 0.50 | 0.55 | 0.53 | 89.08 | 86.49 | 87.20 | 87.31 | 83.87 | 83.74 | 95.64 | 94.58 | 93.93 | 0.76 | 0.55 | 0.68 | 1.13 | 0.63 | 0.76 | 0.31 | 0.52 | 0.35 | MUProt | 7 | ||
8 | MULTICOM−RANK | 87.92 | 85.77 | 86.12 | 85.46 | 84.20 | 81.98 | 95.64 | 94.05 | 94.13 | 0.58 | 0.60 | 0.53 | 0.63 | 0.92 | 0.47 | 0.50 | 0.63 | 0.59 | 88.08 | 86.42 | 86.25 | 86.00 | 84.41 | 82.33 | 96.03 | 94.84 | 94.13 | 0.48 | 0.54 | 0.37 | 0.66 | 0.79 | 0.30 | 0.40 | 0.57 | 0.41 | MULTICOM−RANK | 8 |
9 | COMA−M | 87.86 | 85.27 | 86.19 | 85.23 | 84.41 | 82.78 | 95.44 | 92.39 | 93.12 | 0.57 | 0.51 | 0.55 | 0.57 | 0.97 | 0.66 | 0.47 | 0.37 | 0.41 | 87.86 | 86.47 | 86.27 | 85.46 | 84.41 | 82.87 | 95.44 | 92.66 | 93.24 | 0.42 | 0.55 | 0.38 | 0.47 | 0.79 | 0.48 | 0.26 | 0.12 | 0.15 | COMA−M | 9 |
10 | FALCON_CONSENSUS | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.57 | 0.45 | 0.47 | 0.57 | 0.50 | 0.36 | 0.53 | 0.56 | 0.55 | 87.86 | 86.73 | 86.42 | 85.23 | 83.80 | 82.48 | 96.03 | 93.78 | 93.99 | 0.42 | 0.61 | 0.43 | 0.39 | 0.61 | 0.35 | 0.40 | 0.35 | 0.37 | FALCON_CONSENSUS | 10 |
11 | FALCON | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.57 | 0.45 | 0.47 | 0.57 | 0.50 | 0.36 | 0.53 | 0.56 | 0.55 | 87.86 | 86.73 | 86.42 | 85.23 | 83.80 | 82.48 | 96.03 | 93.78 | 93.99 | 0.42 | 0.61 | 0.43 | 0.39 | 0.61 | 0.35 | 0.40 | 0.35 | 0.37 | FALCON | 11 |
12 | PSI | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.57 | 0.45 | 0.47 | 0.57 | 0.50 | 0.36 | 0.53 | 0.56 | 0.55 | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.42 | 0.18 | 0.22 | 0.39 | 0.19 | 0.03 | 0.35 | 0.31 | 0.35 | PSI | 12 |
13 | RAPTOR | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.57 | 0.45 | 0.47 | 0.57 | 0.50 | 0.36 | 0.53 | 0.56 | 0.55 | 87.86 | 84.90 | 85.78 | 85.23 | 82.36 | 81.49 | 95.83 | 93.58 | 93.91 | 0.42 | 0.18 | 0.22 | 0.39 | 0.19 | 0.03 | 0.35 | 0.31 | 0.35 | RAPTOR | 13 |
14 | FEIG | 87.86 | 83.74 | 86.50 | 85.54 | 80.74 | 82.61 | 95.83 | 93.85 | 94.09 | 0.57 | 0.26 | 0.61 | 0.65 | 0.13 | 0.62 | 0.53 | 0.60 | 0.58 | 88.69 | 87.05 | 86.72 | 86.39 | 84.56 | 82.93 | 95.83 | 95.04 | 94.09 | 0.65 | 0.69 | 0.52 | 0.80 | 0.83 | 0.50 | 0.35 | 0.61 | 0.40 | FEIG | 14 |
15 | pipe_int | 87.75 | 86.42 | 86.43 | 85.23 | 82.77 | 82.63 | 96.03 | 93.65 | 93.99 | 0.55 | 0.71 | 0.59 | 0.57 | 0.59 | 0.62 | 0.57 | 0.57 | 0.56 | 87.75 | 86.42 | 87.01 | 85.23 | 82.87 | 83.56 | 96.03 | 93.65 | 93.99 | 0.39 | 0.54 | 0.62 | 0.39 | 0.34 | 0.71 | 0.40 | 0.32 | 0.37 | pipe_int | 15 |
16 | keasar−server | 87.75 | 86.38 | 86.35 | 85.23 | 81.90 | 82.90 | 94.84 | 92.72 | 93.12 | 0.55 | 0.70 | 0.58 | 0.57 | 0.40 | 0.69 | 0.37 | 0.42 | 0.41 | 87.81 | 86.58 | 86.62 | 85.54 | 82.10 | 83.19 | 95.04 | 92.72 | 93.30 | 0.41 | 0.57 | 0.49 | 0.50 | 0.12 | 0.58 | 0.16 | 0.13 | 0.16 | keasar−server | 16 |
17 | HHpred4 | 87.69 | 83.96 | 86.29 | 85.00 | 81.92 | 82.14 | 95.64 | 93.39 | 94.10 | 0.54 | 0.30 | 0.57 | 0.50 | 0.40 | 0.51 | 0.50 | 0.53 | 0.58 | 87.69 | 83.96 | 86.29 | 85.00 | 81.92 | 82.14 | 95.64 | 93.39 | 94.10 | 0.37 | 0.38 | 0.31 | 0.06 | 0.24 | 0.31 | 0.27 | 0.41 | HHpred4 | 17 | |
18 | Pushchino | 87.53 | 86.75 | 86.44 | 84.85 | 83.97 | 82.66 | 96.03 | 93.78 | 93.99 | 0.50 | 0.76 | 0.60 | 0.46 | 0.87 | 0.63 | 0.57 | 0.59 | 0.56 | 87.53 | 86.75 | 86.44 | 84.85 | 83.97 | 82.66 | 96.03 | 93.78 | 93.99 | 0.33 | 0.61 | 0.43 | 0.26 | 0.66 | 0.41 | 0.40 | 0.35 | 0.37 | Pushchino | 18 |
19 | MUSTER | 87.53 | 86.34 | 86.00 | 84.92 | 83.95 | 82.29 | 95.64 | 93.92 | 93.36 | 0.50 | 0.69 | 0.51 | 0.48 | 0.86 | 0.55 | 0.50 | 0.61 | 0.45 | 87.53 | 86.34 | 86.83 | 85.00 | 83.95 | 83.09 | 95.64 | 93.92 | 93.96 | 0.33 | 0.52 | 0.56 | 0.31 | 0.66 | 0.55 | 0.31 | 0.38 | 0.36 | MUSTER | 19 |
20 | HHpred2 | 87.53 | 84.02 | 86.41 | 85.08 | 82.36 | 82.35 | 96.03 | 93.92 | 94.04 | 0.50 | 0.31 | 0.59 | 0.52 | 0.50 | 0.56 | 0.57 | 0.61 | 0.57 | 87.53 | 84.02 | 86.41 | 85.08 | 82.36 | 82.35 | 96.03 | 93.92 | 94.04 | 0.33 | 0.42 | 0.34 | 0.19 | 0.31 | 0.40 | 0.38 | 0.39 | HHpred2 | 20 | |
21 | 3Dpro | 87.47 | 85.81 | 85.97 | 85.00 | 83.97 | 82.23 | 95.83 | 93.72 | 93.14 | 0.49 | 0.61 | 0.50 | 0.50 | 0.87 | 0.53 | 0.53 | 0.58 | 0.42 | 87.58 | 85.81 | 86.12 | 85.00 | 83.97 | 82.39 | 95.83 | 93.78 | 93.86 | 0.34 | 0.39 | 0.33 | 0.31 | 0.66 | 0.32 | 0.35 | 0.35 | 0.33 | 3Dpro | 21 |
22 | forecast | 87.42 | 85.50 | 86.20 | 84.77 | 83.33 | 81.99 | 95.44 | 93.72 | 94.07 | 0.48 | 0.55 | 0.55 | 0.44 | 0.72 | 0.48 | 0.47 | 0.58 | 0.58 | 87.42 | 85.50 | 86.20 | 84.77 | 83.33 | 81.99 | 95.44 | 93.72 | 94.07 | 0.30 | 0.32 | 0.36 | 0.23 | 0.48 | 0.19 | 0.26 | 0.34 | 0.40 | forecast | 22 |
23 | FFASstandard | 87.42 | 83.76 | 86.14 | 84.85 | 81.87 | 82.08 | 95.44 | 90.94 | 94.08 | 0.48 | 0.26 | 0.54 | 0.46 | 0.39 | 0.50 | 0.47 | 0.15 | 0.58 | 87.42 | 83.76 | 86.14 | 84.85 | 81.87 | 82.08 | 95.44 | 90.94 | 94.08 | 0.30 | 0.34 | 0.26 | 0.05 | 0.22 | 0.26 | 0.40 | FFASstandard | 23 | ||
24 | pro−sp3−TASSER | 87.36 | 85.44 | 85.58 | 84.69 | 83.36 | 81.17 | 96.23 | 93.98 | 94.01 | 0.47 | 0.54 | 0.43 | 0.42 | 0.73 | 0.29 | 0.60 | 0.62 | 0.57 | 87.53 | 85.96 | 87.02 | 84.92 | 83.36 | 83.55 | 96.23 | 94.44 | 94.01 | 0.33 | 0.43 | 0.62 | 0.28 | 0.48 | 0.70 | 0.45 | 0.49 | 0.38 | pro−sp3−TASSER | 24 |
25 | Zhang−Server | 87.36 | 85.18 | 86.20 | 85.31 | 82.69 | 82.86 | 94.84 | 89.81 | 92.65 | 0.47 | 0.50 | 0.55 | 0.59 | 0.58 | 0.68 | 0.37 | 0.33 | 87.86 | 85.57 | 87.01 | 85.77 | 83.13 | 83.64 | 95.83 | 93.58 | 93.54 | 0.42 | 0.33 | 0.62 | 0.58 | 0.42 | 0.73 | 0.35 | 0.31 | 0.24 | Zhang−Server | 25 | |
26 | SAM−T02−server | 87.25 | 86.55 | 84.15 | 84.39 | 82.03 | 79.30 | 96.03 | 93.78 | 93.99 | 0.44 | 0.73 | 0.15 | 0.34 | 0.43 | 0.57 | 0.59 | 0.56 | 87.25 | 86.55 | 84.94 | 84.39 | 82.03 | 81.22 | 96.03 | 93.78 | 93.99 | 0.25 | 0.57 | 0.10 | 0.10 | 0.40 | 0.35 | 0.37 | SAM−T02−server | 26 | |||
27 | fais−server | 87.25 | 85.85 | 86.34 | 84.92 | 81.74 | 82.81 | 95.24 | 92.20 | 93.13 | 0.44 | 0.61 | 0.58 | 0.48 | 0.36 | 0.67 | 0.44 | 0.34 | 0.41 | 87.25 | 85.85 | 86.34 | 84.92 | 81.74 | 82.81 | 95.24 | 92.20 | 93.13 | 0.25 | 0.40 | 0.40 | 0.28 | 0.01 | 0.46 | 0.21 | 0.02 | 0.11 | fais−server | 27 |
28 | FFASsuboptimal | 87.19 | 85.79 | 85.90 | 84.31 | 83.08 | 81.91 | 95.83 | 94.51 | 93.86 | 0.43 | 0.60 | 0.49 | 0.31 | 0.66 | 0.46 | 0.53 | 0.70 | 0.54 | 87.86 | 86.23 | 86.09 | 84.85 | 84.28 | 82.06 | 95.83 | 94.78 | 94.10 | 0.42 | 0.49 | 0.32 | 0.26 | 0.75 | 0.21 | 0.35 | 0.56 | 0.41 | FFASsuboptimal | 28 |
29 | 3DShot2 | 87.14 | 85.81 | 83.65 | 84.00 | 82.51 | 78.24 | 95.83 | 93.98 | 93.89 | 0.42 | 0.61 | 0.05 | 0.23 | 0.54 | 0.53 | 0.62 | 0.54 | 87.14 | 85.81 | 83.65 | 84.00 | 82.51 | 78.24 | 95.83 | 93.98 | 93.89 | 0.22 | 0.39 | 0.24 | 0.35 | 0.39 | 0.34 | 3DShot2 | 29 | ||||
30 | PS2−server | 87.14 | 85.70 | 86.09 | 84.92 | 81.28 | 82.64 | 95.24 | 92.20 | 93.03 | 0.42 | 0.59 | 0.53 | 0.48 | 0.26 | 0.63 | 0.44 | 0.34 | 0.40 | 87.14 | 85.70 | 86.09 | 84.92 | 81.28 | 82.64 | 95.24 | 92.20 | 93.03 | 0.22 | 0.37 | 0.32 | 0.28 | 0.40 | 0.21 | 0.02 | 0.08 | PS2−server | 30 | |
31 | GS−KudlatyPred | 87.14 | 85.59 | 86.11 | 84.85 | 81.41 | 82.58 | 94.84 | 93.25 | 93.09 | 0.42 | 0.57 | 0.53 | 0.46 | 0.29 | 0.61 | 0.37 | 0.51 | 0.41 | 87.14 | 85.59 | 86.11 | 84.85 | 81.41 | 82.58 | 94.84 | 93.25 | 93.09 | 0.22 | 0.34 | 0.33 | 0.26 | 0.38 | 0.11 | 0.24 | 0.10 | GS−KudlatyPred | 31 | |
32 | Fiser−M4T | 87.08 | 86.01 | 85.58 | 84.31 | 83.33 | 81.66 | 95.64 | 93.78 | 93.21 | 0.41 | 0.64 | 0.43 | 0.31 | 0.72 | 0.40 | 0.50 | 0.59 | 0.43 | 87.08 | 86.01 | 85.58 | 84.31 | 83.33 | 81.66 | 95.64 | 93.78 | 93.21 | 0.20 | 0.44 | 0.15 | 0.07 | 0.48 | 0.08 | 0.31 | 0.35 | 0.14 | Fiser−M4T | 32 |
33 | SAM−T08−server | 87.03 | 84.52 | 86.46 | 84.46 | 78.82 | 82.49 | 96.03 | 94.58 | 94.02 | 0.40 | 0.39 | 0.60 | 0.36 | 0.59 | 0.57 | 0.71 | 0.57 | 87.42 | 86.34 | 86.85 | 84.77 | 83.15 | 83.16 | 96.03 | 94.58 | 94.02 | 0.30 | 0.52 | 0.57 | 0.23 | 0.42 | 0.57 | 0.40 | 0.52 | 0.38 | SAM−T08−server | 33 | |
34 | 3D−JIGSAW_AEP | 86.97 | 85.38 | 85.86 | 84.23 | 80.80 | 83.12 | 94.64 | 92.00 | 93.19 | 0.38 | 0.53 | 0.48 | 0.29 | 0.15 | 0.74 | 0.34 | 0.31 | 0.42 | 87.03 | 85.85 | 85.89 | 84.39 | 80.80 | 83.16 | 94.64 | 92.00 | 93.19 | 0.19 | 0.40 | 0.25 | 0.10 | 0.57 | 0.06 | 0.13 | 3D−JIGSAW_AEP | 34 | ||
35 | 3D−JIGSAW_V3 | 86.92 | 86.07 | 86.20 | 84.23 | 82.49 | 83.11 | 94.44 | 90.74 | 92.86 | 0.37 | 0.65 | 0.55 | 0.29 | 0.53 | 0.73 | 0.31 | 0.12 | 0.37 | 86.97 | 86.12 | 86.20 | 84.23 | 82.49 | 83.11 | 94.44 | 90.87 | 92.86 | 0.17 | 0.46 | 0.36 | 0.04 | 0.23 | 0.56 | 0.01 | 0.03 | 3D−JIGSAW_V3 | 35 | |
36 | BAKER−ROBETTA | 86.81 | 85.62 | 85.15 | 84.31 | 81.39 | 82.37 | 95.04 | 89.22 | 92.91 | 0.35 | 0.57 | 0.34 | 0.31 | 0.28 | 0.56 | 0.40 | 0.38 | 87.42 | 86.23 | 86.26 | 85.00 | 81.87 | 82.55 | 95.04 | 89.35 | 92.91 | 0.30 | 0.49 | 0.37 | 0.31 | 0.05 | 0.37 | 0.16 | 0.05 | BAKER−ROBETTA | 36 | ||
37 | MUFOLD−Server | 86.70 | 85.40 | 84.53 | 83.92 | 81.72 | 80.48 | 95.24 | 89.02 | 92.90 | 0.33 | 0.54 | 0.22 | 0.21 | 0.36 | 0.13 | 0.44 | 0.38 | 87.53 | 85.40 | 84.59 | 84.85 | 81.72 | 80.48 | 96.03 | 94.84 | 94.04 | 0.33 | 0.29 | 0.26 | 0.01 | 0.40 | 0.57 | 0.39 | MUFOLD−Server | 37 | |||
38 | circle | 86.70 | 85.22 | 85.01 | 84.23 | 81.82 | 81.59 | 94.25 | 92.26 | 92.08 | 0.33 | 0.51 | 0.32 | 0.29 | 0.38 | 0.39 | 0.28 | 0.35 | 0.23 | 87.31 | 86.31 | 85.23 | 84.85 | 83.82 | 81.59 | 95.04 | 92.72 | 92.73 | 0.27 | 0.51 | 0.04 | 0.26 | 0.62 | 0.06 | 0.16 | 0.13 | circle | 38 | |
39 | FAMSD | 86.70 | 84.66 | 84.79 | 84.15 | 82.51 | 81.11 | 94.84 | 91.67 | 92.49 | 0.33 | 0.41 | 0.27 | 0.27 | 0.54 | 0.28 | 0.37 | 0.26 | 0.30 | 86.70 | 84.66 | 84.79 | 84.15 | 82.51 | 81.11 | 94.84 | 92.72 | 92.49 | 0.10 | 0.12 | 0.01 | 0.24 | 0.11 | 0.13 | FAMSD | 39 | |||
40 | LOOPP_Server | 86.47 | 83.96 | 85.76 | 84.15 | 80.72 | 82.10 | 95.24 | 89.55 | 93.11 | 0.28 | 0.30 | 0.46 | 0.27 | 0.13 | 0.50 | 0.44 | 0.41 | 86.47 | 83.96 | 86.40 | 84.15 | 80.72 | 82.54 | 95.83 | 94.11 | 93.67 | 0.03 | 0.42 | 0.01 | 0.37 | 0.35 | 0.42 | 0.28 | LOOPP_Server | 40 | |||
41 | FFASflextemplate | 86.36 | 81.93 | 82.27 | 83.54 | 81.69 | 77.75 | 95.24 | 92.33 | 91.13 | 0.26 | 0.11 | 0.35 | 0.44 | 0.36 | 0.07 | 86.92 | 85.48 | 84.17 | 83.85 | 82.59 | 79.58 | 96.03 | 94.31 | 92.92 | 0.16 | 0.31 | 0.26 | 0.40 | 0.46 | 0.05 | FFASflextemplate | 41 | ||||||
42 | CpHModels | 86.25 | 84.37 | 85.23 | 84.08 | 81.31 | 81.96 | 94.44 | 92.72 | 92.15 | 0.23 | 0.36 | 0.36 | 0.25 | 0.26 | 0.47 | 0.31 | 0.42 | 0.25 | 86.25 | 84.37 | 85.23 | 84.08 | 81.31 | 81.96 | 94.44 | 92.72 | 92.15 | 0.05 | 0.04 | 0.18 | 0.01 | 0.13 | CpHModels | 42 | ||||
43 | Pcons_dot_net | 86.20 | 83.09 | 86.29 | 83.15 | 82.18 | 82.51 | 95.64 | 93.92 | 93.92 | 0.22 | 0.15 | 0.57 | 0.46 | 0.60 | 0.50 | 0.61 | 0.55 | 86.31 | 83.09 | 86.71 | 83.77 | 82.18 | 82.83 | 95.83 | 94.38 | 93.97 | 0.52 | 0.14 | 0.47 | 0.35 | 0.48 | 0.37 | Pcons_dot_net | 43 | ||||
44 | Pcons_multi | 86.20 | 83.09 | 86.29 | 83.15 | 82.18 | 82.51 | 95.64 | 93.92 | 93.92 | 0.22 | 0.15 | 0.57 | 0.46 | 0.60 | 0.50 | 0.61 | 0.55 | 86.92 | 84.63 | 86.29 | 84.77 | 82.72 | 82.51 | 95.64 | 93.92 | 93.92 | 0.16 | 0.11 | 0.38 | 0.23 | 0.30 | 0.36 | 0.31 | 0.38 | 0.35 | Pcons_multi | 44 | |
45 | BioSerf | 85.86 | 82.43 | 84.68 | 83.00 | 72.97 | 80.37 | 94.84 | 93.12 | 92.88 | 0.15 | 0.04 | 0.25 | 0.11 | 0.37 | 0.49 | 0.37 | 85.86 | 82.43 | 84.68 | 83.00 | 72.97 | 80.37 | 94.84 | 93.12 | 92.88 | 0.11 | 0.21 | 0.04 | BioSerf | 45 | ||||||||
46 | LEE−SERVER | 85.03 | 83.70 | 82.87 | 85.15 | 81.72 | 81.99 | 85.52 | 82.74 | 83.62 | 0.25 | 0.54 | 0.36 | 0.48 | 86.86 | 85.94 | 83.06 | 85.23 | 81.80 | 82.14 | 95.64 | 92.59 | 94.09 | 0.14 | 0.42 | 0.39 | 0.03 | 0.24 | 0.31 | 0.10 | 0.40 | LEE−SERVER | 46 | ||||||
47 | nFOLD3 | 85.03 | 80.60 | 86.46 | 82.39 | 78.23 | 82.56 | 95.44 | 94.11 | 93.87 | 0.60 | 0.61 | 0.47 | 0.64 | 0.54 | 87.58 | 86.88 | 86.46 | 84.77 | 83.80 | 82.56 | 96.03 | 94.11 | 93.99 | 0.34 | 0.65 | 0.44 | 0.23 | 0.61 | 0.38 | 0.40 | 0.42 | 0.37 | nFOLD3 | 47 | ||||
48 | panther_server | 84.92 | 83.19 | 81.27 | 83.08 | 81.03 | 77.15 | 92.46 | 90.74 | 89.85 | 0.17 | 0.20 | 0.12 | 86.20 | 83.19 | 81.68 | 84.00 | 81.03 | 77.25 | 94.05 | 91.93 | 90.44 | panther_server | 48 | |||||||||||||||
49 | huber−torda−server | 84.70 | 78.16 | 78.82 | 80.92 | 76.82 | 70.54 | 96.03 | 93.78 | 93.99 | 0.57 | 0.59 | 0.56 | 84.70 | 78.16 | 78.82 | 80.92 | 76.82 | 70.54 | 96.03 | 93.78 | 93.99 | 0.40 | 0.35 | 0.37 | huber−torda−server | 49 | ||||||||||||
50 | Phyre2 | 78.38 | 71.14 | 76.19 | 78.15 | 76.05 | 73.84 | 82.74 | 79.43 | 81.84 | 87.64 | 84.39 | 85.87 | 85.08 | 83.54 | 82.22 | 96.03 | 93.78 | 93.99 | 0.36 | 0.05 | 0.25 | 0.34 | 0.54 | 0.27 | 0.40 | 0.35 | 0.37 | Phyre2 | 50 | |||||||||
51 | Phragment | 78.38 | 71.14 | 76.19 | 78.15 | 76.05 | 73.84 | 82.74 | 79.43 | 81.84 | 87.64 | 84.39 | 85.50 | 85.08 | 83.54 | 81.64 | 96.03 | 93.78 | 93.99 | 0.36 | 0.05 | 0.13 | 0.34 | 0.54 | 0.08 | 0.40 | 0.35 | 0.37 | Phragment | 51 | |||||||||
52 | Poing | 78.38 | 71.10 | 76.19 | 78.15 | 76.05 | 73.84 | 82.74 | 79.43 | 81.84 | 87.64 | 84.39 | 86.09 | 85.08 | 83.54 | 82.57 | 96.03 | 93.78 | 93.99 | 0.36 | 0.05 | 0.32 | 0.34 | 0.54 | 0.38 | 0.40 | 0.35 | 0.37 | Poing | 52 | |||||||||
53 | ACOMPMOD | 78.10 | 70.69 | 76.11 | 78.00 | 75.49 | 73.92 | 80.95 | 78.31 | 80.81 | 83.43 | 79.62 | 86.29 | 81.46 | 79.10 | 82.48 | 95.44 | 94.11 | 93.73 | 0.38 | 0.35 | 0.26 | 0.42 | 0.29 | ACOMPMOD | 53 | |||||||||||||
54 | FUGUE_KM | 77.83 | 74.65 | 74.80 | 77.92 | 75.46 | 72.66 | 80.75 | 77.31 | 79.35 | 77.83 | 74.65 | 74.80 | 77.92 | 75.46 | 72.66 | 80.75 | 77.31 | 79.35 | FUGUE_KM | 54 | ||||||||||||||||||
55 | COMA | 76.94 | 74.35 | 75.38 | 77.46 | 75.15 | 73.18 | 79.36 | 76.19 | 80.04 | 86.53 | 84.05 | 86.27 | 84.08 | 82.23 | 82.87 | 95.04 | 92.00 | 93.24 | 0.05 | 0.38 | 0.15 | 0.48 | 0.16 | 0.15 | COMA | 55 | ||||||||||||
56 | mGenTHREADER | 76.83 | 73.72 | 73.57 | 77.77 | 75.31 | 72.23 | 77.98 | 72.95 | 76.32 | 76.83 | 73.72 | 73.57 | 77.77 | 75.31 | 72.23 | 77.98 | 72.95 | 76.32 | mGenTHREADER | 56 | ||||||||||||||||||
57 | FOLDpro | 71.06 | 67.52 | 67.16 | 71.46 | 67.82 | 67.38 | 73.61 | 70.97 | 72.31 | 76.11 | 72.19 | 75.05 | 75.92 | 72.54 | 72.29 | 79.96 | 75.20 | 81.00 | FOLDpro | 57 | ||||||||||||||||||
58 | Frankenstein | 70.90 | 65.28 | 69.03 | 72.23 | 64.28 | 69.27 | 74.01 | 71.63 | 73.46 | 78.05 | 75.17 | 76.70 | 77.92 | 75.26 | 73.84 | 81.55 | 75.86 | 82.95 | Frankenstein | 58 | ||||||||||||||||||
59 | Pcons_local | 67.74 | 60.98 | 66.70 | 70.00 | 64.97 | 66.77 | 71.83 | 68.52 | 71.61 | 68.40 | 64.04 | 67.71 | 70.23 | 65.92 | 68.03 | 72.62 | 68.52 | 72.17 | Pcons_local | 59 | ||||||||||||||||||
60 | SAM−T06−server | 65.19 | 61.36 | 60.05 | 65.85 | 61.33 | 56.77 | 71.63 | 67.92 | 71.64 | 87.03 | 86.18 | 85.23 | 84.15 | 82.20 | 81.68 | 96.03 | 93.78 | 93.99 | 0.19 | 0.48 | 0.04 | 0.01 | 0.15 | 0.09 | 0.40 | 0.35 | 0.37 | SAM−T06−server | 60 | |||||||||
61 | Distill | 64.63 | 55.14 | 65.12 | 66.92 | 56.18 | 62.73 | 83.93 | 81.55 | 79.58 | 66.96 | 59.88 | 65.22 | 68.00 | 60.31 | 63.83 | 85.91 | 83.20 | 79.98 | Distill | 61 | ||||||||||||||||||
62 | mariner1 | 62.47 | 55.03 | 49.10 | 65.00 | 59.67 | 51.14 | 62.10 | 55.36 | 49.27 | 68.35 | 63.21 | 65.04 | 67.77 | 62.69 | 61.94 | 74.80 | 73.08 | 74.18 | mariner1 | 62 | ||||||||||||||||||
63 | OLGAFS | 60.98 | 57.72 | 43.26 | 64.08 | 61.00 | 46.07 | 55.95 | 50.66 | 39.54 | 60.98 | 57.83 | 43.43 | 64.39 | 61.00 | 46.14 | 56.15 | 52.84 | 39.88 | OLGAFS | 63 | ||||||||||||||||||
64 | rehtnap | 57.43 | 43.46 | 51.00 | 60.23 | 45.72 | 52.62 | 58.93 | 51.79 | 60.31 | 57.59 | 43.70 | 51.00 | 60.77 | 45.72 | 52.69 | 58.93 | 51.79 | 60.31 | rehtnap | 64 | ||||||||||||||||||
65 | MUFOLD−MD | 8.15 | 7.74 | 20.74 | 9.77 | 8.77 | 20.87 | 19.64 | 19.05 | 34.98 | 9.76 | 8.93 | 23.61 | 12.08 | 9.95 | 26.40 | 19.64 | 19.05 | 36.57 | MUFOLD−MD | 65 | ||||||||||||||||||
66 | RBO−Proteus | 7.43 | 6.69 | 19.34 | 8.46 | 6.92 | 18.37 | 21.03 | 18.85 | 36.37 | 7.43 | 6.84 | 20.42 | 9.62 | 8.95 | 20.19 | 21.03 | 18.85 | 36.37 | RBO−Proteus | 66 | ||||||||||||||||||
67 | RANDOM | 7.06 | 6.28 | 7.06 | 9.56 | 8.14 | 9.56 | 16.46 | 14.34 | 16.46 | 7.06 | 6.28 | 7.06 | 9.56 | 8.14 | 9.56 | 16.46 | 14.34 | 16.46 | RANDOM | 67 | ||||||||||||||||||
68 | BHAGEERATH | BHAGEERATH | 68 | ||||||||||||||||||||||||||||||||||||
69 | GS−MetaServer2 | GS−MetaServer2 | 69 | ||||||||||||||||||||||||||||||||||||
70 | GeneSilicoMetaServer | GeneSilicoMetaServer | 70 | ||||||||||||||||||||||||||||||||||||
71 | YASARA | YASARA | 71 | ||||||||||||||||||||||||||||||||||||
72 | mahmood−torda−server | mahmood−torda−server | 72 | ||||||||||||||||||||||||||||||||||||
73 | schenk−torda−server | schenk−torda−server | 73 | ||||||||||||||||||||||||||||||||||||
74 | test_http_server_01 | test_http_server_01 | 74 |