T0470

Targets
387 388 389 390
391 392 393 394
395 396 397 398
399 400 401 402
403 404 405 406
407 408 409 410
411 412 413 414
415 416 417 418
419 420 421 422
423 424 425 426
427 428 429 430
431 432 433 434
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483 484 485 486
487 488 489 490
491 492 493 494
495 496 497 498
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503 504 505 506
507 508 509 510
511 512 513 514

T0470

HD-superfamily hydrolase (BT9727_1981) from Bacillus thuringiensis

Target type: Server only

Target sequence:

>T0470 BT9727_1981, Bacillus thuringiensis, 223 residues
MTKQEKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEEAGMKKVSDWLEELHVEEEESKHVLHIIANMSYKGGHGGKVESIEGKLVQDADRLDALGAIGIARTFAYGGAKGRLMYDPTIPPREVMTKDEYRKNNDPSLNHFYEKLLKLKDLMNTNAAKQEAEVRHRYMEQFIEQFMKEWNAQILEHHHHHH

Structure:
Method: X-ray, res=2.9Å, R/Rfree=0.25/0.29
Determined by: NESG
PDB ID: 3djb

3djb_A_cartoon
Cartoon diagram of T0470: 3djb chain A

PyMOL of 3djb

Domains:  PyMOL of domains

Two domains. Residue ranges: 2-100 and 112-214. PDB range matches target sequence range. Not a very good quality structure with three disordered loops. Domain break is placed in one of those disordered loop of 11 residues long. The first α-helix of the C-domain (just after the chain-break) forms tight interactions with the N-domain, completing the 5-helical bundle. This α-helix carries one of Mg ligands (D122). Since the target has very similar templates in PDB (60% identity) without apparent movement between domains, domain split may not be necessary for evaluation.

3djb_A domains
Domains of T0470: 3djb chain A, N- and C-domains are colored blue and red,
Mg ion is shown as a white sphere

470 domain evaluation plot
Correlation between weighted by the number of residues sum of GDT-TS scores for domain-based evlatuation (y, vertical axis) and whole chain GDT-TS (x, horizontal axis).

To compute the weighted sum, GDT-TS for each domain was multiplied by the domain length, and this sum was divided by the sum of domain lengths. Each point represents first server model. Green, gray and black points are top 10, bottom 25% and the rest of prediction models. Blue line is the best-fit slope line (intersection 0) to the top 10 server models. Red line is the diagonal. Slope and root mean square y-x distance for the top 10 models (average difference between the weighted sum of domain GDT-TS scores and the whole chain GDT-TS score) are shown above the plot.

Structure classification:

HD-hydrolase. N-domain is a 5-helical bundle, with the 3rd α-helix surrounded by other four α-helices, first three α-helices form left-handed bundle and last three α-helices form right handed bundle. C-domain is a right-handed 3-helical bundle. Active site is housed between the domains and contains a metal-binding site formed by two His and two Asp residues, hence the name.

3djb_A acive site
Metal-binding site of T0470: 3djb chain A

CASP category:

Full chain: Comparative modeling: easy. Closest template detectable by BLAST, but contains some structural differences, mostly in the loops. Due to poor structure quality and some amount of disorder, it is unclear however, how precise these loop conformations are.

1st domain: Comparative modeling: easy; 2nd domain: Comparative modeling: easy.

Closest templates:

Several templates fully covering the target sequence with ~60% identity, e.g. 2pjq, 2qgs, 3b57.

Target sequence - PDB file inconsistencies:

X-ray structure is missing N-terminal Met, C-terminal His-tag 215-ILEHHHHHH-223, and three loops: 62-EK-63, 101-SYKGGHGGKVE-111, 155-EVMTKDEYRKNN-166. Selenomethionine Mse residues are present instead of Met. PDB numbering agrees with the target sequence numbering.

T0470    3djb.pdb    T0470.pdb    PyMOL    PyMOL of domains    

T0470    1 MTKQEKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEEAGMKKVSDWLEELHVEEEESKHVLHIIANMSYKGGHGGKVESIEGKLVQDADRLDALGAIGIARTFAYGGAKGRLMYDPTIPPREVMTKDEYRKNNDPSLNHFYEKLLKLKDLMNTNAAKQEAEVRHRYMEQFIEQFMKEWNAQILEHHHHHH 223
           ~|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~||||||||||||||||||||||||||||||||||||~~~~~~~~~~~|||||||||||||||||||||||||||||||||||||||||||~~~~~~~~~~~~||||||||||||||||||||||||||||||||||||||||||||||||~~~~~~~~~
3djbA    2 -TKQEKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVAD--LNESEEAGMKKVSDWLEELHVEEEESKHVLHIIANM-----------SIEGKLVQDADRLDALGAIGIARTFAYGGAKGRLMYDPTIPPR------------DPSLNHFYEKLLKLKDLMNTNAAKQEAEVRHRYMEQFIEQFMKEWNAQ--------- 214

Residue change log: change 36, 53, 73, 100, 146, 184, 200, 208, MSE to MET;

We suggest to evaluate this target as a single domain spanning whole chain. However, evolutionarily this is a 2-domain protein. (Not a very good quality structure with three disordered loops. Domain break is placed in one of those disordered loop of 11 residues long):

1st domain: target 2-62, 65-100 ; pdb 2-62, 65-100

2nd domain: target 112-154, 167-214 ; pdb 112-154, 167-214

Sequence classification:

Contains HD-domain (PF01966) from Pfam. Full sequence matches COG1418.

Comments:

Server predictions:

T0470:pdb 2-214:seq 2-214:CM_easy;   alignment

distribution of first scores
First models for T0470: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

470_1:pdb 2-100:seq 2-100:CM_easy;   alignment

distribution of first scores
First models for T0470_1: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

470_2:pdb 112-214:seq 112-214:CM_easy;   alignment

distribution of first scores
First models for T0470_2: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

click on a score in the table below to display the model in PyMOL

# GROUP ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ ↓ GROUP #
T0470 470_1 470_2 T0470 470_1 470_2 T0470 470_1 470_2 T0470 470_1 470_2
First score First Z-score Best score Best Z-score
1 FEIG 86.70 83.42 78.77 83.76 75.86 72.50 93.13 92.03 87.82 1.28 1.48 0.49 0.57 0.58 0.78 0.78 1.08 0.26 86.70 83.42 82.96 86.86 78.78 74.59 93.13 92.03 92.18 1.24 1.23 1.21 1.07 0.59 1.00 1.03 1.12 1.12 FEIG 1
2 PSI 86.30 80.98 78.84 84.28 76.03 72.36 93.68 92.58 88.28 1.24 1.29 0.50 0.65 0.60 0.76 0.85 1.14 0.33 86.30 80.98 78.84 84.28 78.18 72.36 93.68 92.58 90.46 1.18 0.97 0.43 0.51 0.49 0.56 1.16 1.21 0.69 PSI 2
3 keasar−server 86.17 82.62 78.48 84.02 72.85 71.78 93.41 92.31 88.03 1.22 1.42 0.45 0.61 0.18 0.67 0.82 1.11 0.29 86.17 82.62 78.84 84.02 73.37 72.41 93.96 92.86 88.18 1.16 1.14 0.43 0.45 -0.35 0.57 1.23 1.25 0.12 keasar−server 3
4 Frankenstein 86.17 79.34 77.91 83.76 76.89 70.62 93.96 92.49 87.99 1.22 1.16 0.38 0.57 0.71 0.50 0.89 1.13 0.29 86.17 79.34 77.91 83.76 76.89 70.62 93.96 92.49 87.99 1.16 0.81 0.25 0.40 0.26 0.21 1.23 1.19 0.07 Frankenstein 4
5 GS−KudlatyPred 86.04 81.52 78.82 84.54 80.76 72.31 93.68 91.48 88.05 1.21 1.33 0.50 0.69 1.23 0.75 0.85 1.02 0.30 86.04 81.52 78.82 84.54 80.76 72.31 93.68 91.48 91.15 1.14 1.03 0.42 0.57 0.94 0.55 1.16 1.03 0.86 GS−KudlatyPred 5
6 3D−JIGSAW_V3 85.90 81.38 78.65 82.73 78.78 71.83 93.41 93.04 87.74 1.20 1.32 0.48 0.42 0.97 0.68 0.82 1.19 0.25 85.90 81.56 78.65 82.73 78.78 71.83 93.68 93.31 87.90 1.12 1.03 0.39 0.18 0.59 0.45 1.16 1.33 0.05 3D−JIGSAW_V3 6
7 FAMSD 85.77 82.49 76.67 82.99 75.26 68.25 93.96 90.84 88.03 1.18 1.41 0.21 0.46 0.50 0.14 0.89 0.95 0.29 86.04 82.49 77.16 83.50 75.34 69.27 93.96 90.84 88.03 1.14 1.13 0.11 0.34 -0.01 -0.06 1.23 0.92 0.08 FAMSD 7
8 nFOLD3 85.77 82.22 76.97 82.99 72.68 68.81 93.68 92.58 88.13 1.18 1.39 0.25 0.46 0.16 0.22 0.85 1.14 0.31 85.77 82.22 76.97 82.99 73.20 68.81 93.68 92.58 90.48 1.10 1.10 0.07 0.23 -0.38 -0.15 1.16 1.21 0.69 nFOLD3 8
9 SAM−T02−server 85.77 81.96 77.09 82.99 72.51 69.06 93.68 92.58 88.13 1.18 1.37 0.26 0.46 0.13 0.26 0.85 1.14 0.31 85.77 81.96 77.09 82.99 78.44 69.06 93.68 92.58 90.48 1.10 1.08 0.10 0.23 0.53 -0.10 1.16 1.21 0.69 SAM−T02−server 9
10 FALCON 85.24 81.25 77.61 83.50 74.57 70.86 93.41 91.21 87.60 1.13 1.31 0.33 0.53 0.41 0.53 0.82 0.99 0.23 85.24 81.25 78.29 83.50 75.77 71.54 93.41 91.21 91.09 1.02 1.00 0.32 0.34 0.07 0.40 1.10 0.98 0.85 FALCON 10
11 Pushchino 84.44 77.79 74.30 82.99 72.68 68.81 90.93 90.39 82.94 1.05 1.03 -0.12 0.46 0.16 0.22 0.51 0.90 -0.47 84.44 77.79 74.30 82.99 72.68 68.81 90.93 90.39 82.94 0.90 0.65 -0.43 0.23 -0.47 -0.15 0.51 0.85 -1.20 Pushchino 11
12 fais−server 84.18 81.16 78.60 83.25 79.30 72.34 92.31 89.74 87.82 1.02 1.30 0.47 0.50 1.04 0.76 0.68 0.83 0.26 84.18 81.16 78.60 84.54 80.41 72.34 92.86 90.66 91.37 0.86 0.99 0.38 0.57 0.88 0.55 0.97 0.89 0.92 fais−server 12
13 PS2−server 83.91 80.19 78.52 84.02 73.20 72.10 92.86 91.94 87.76 1.00 1.23 0.46 0.61 0.22 0.72 0.75 1.07 0.25 83.91 81.65 78.75 84.02 77.15 72.40 92.86 91.94 87.94 0.81 1.04 0.41 0.45 0.31 0.57 0.97 1.10 0.06 PS2−server 13
14 COMA−M 83.91 79.30 77.84 84.02 76.80 70.84 90.66 88.83 87.06 1.00 1.15 0.37 0.61 0.70 0.53 0.47 0.73 0.15 83.91 79.30 80.05 88.14 84.62 74.79 92.03 90.39 87.81 0.81 0.80 0.66 1.34 1.61 1.04 0.77 0.85 0.02 COMA−M 14
15 forecast 83.78 76.77 76.52 84.54 70.53 68.76 91.76 85.71 87.09 0.98 0.95 0.19 0.69 -0.13 0.21 0.61 0.39 0.15 83.78 79.34 78.39 84.54 78.18 70.94 91.76 87.64 88.05 0.79 0.81 0.34 0.57 0.49 0.28 0.71 0.39 0.08 forecast 15
16 pipe_int 83.51 77.13 77.19 83.76 76.03 69.42 90.93 86.36 87.15 0.96 0.98 0.28 0.57 0.60 0.31 0.51 0.46 0.16 83.51 77.13 77.19 83.76 76.03 69.42 90.93 86.36 87.15 0.75 0.58 0.11 0.40 0.11 -0.03 0.51 0.18 -0.14 pipe_int 16
17 HHpred4 83.11 79.21 78.46 84.02 75.77 72.23 92.03 86.91 87.52 0.92 1.15 0.45 0.61 0.57 0.74 0.64 0.52 0.22 83.11 79.21 78.46 84.02 75.77 72.23 92.03 86.91 87.52 0.69 0.79 0.36 0.45 0.07 0.53 0.77 0.27 -0.05 HHpred4 17
18 circle 82.58 78.41 75.12 82.99 80.76 66.03 92.03 77.20 87.05 0.86 1.08 -0.01 0.46 1.23 -0.20 0.64 -0.54 0.15 84.97 81.61 75.43 82.99 80.76 67.91 92.31 90.48 87.05 0.98 1.04 -0.22 0.23 0.94 -0.33 0.84 0.86 -0.17 circle 18
19 HHpred2 82.45 78.81 78.40 83.76 76.55 71.73 92.03 89.10 87.84 0.85 1.12 0.44 0.57 0.67 0.66 0.64 0.76 0.27 82.45 78.81 78.40 83.76 76.55 71.73 92.03 89.10 87.84 0.59 0.75 0.34 0.40 0.20 0.43 0.77 0.63 0.03 HHpred2 19
20 MUFOLD−Server 81.92 74.96 74.65 78.09 68.47 67.04 92.03 87.27 85.95 0.80 0.81 -0.07 -0.28 -0.40 -0.05 0.64 0.56 -0.02 83.91 79.30 76.51 83.25 76.20 70.68 92.03 87.27 85.97 0.81 0.80 -0.01 0.29 0.14 0.22 0.77 0.33 -0.44 MUFOLD−Server 20
21 HHpred5 81.65 77.31 79.97 87.37 81.36 73.91 89.83 85.26 86.67 0.77 1.00 0.66 1.12 1.31 0.99 0.37 0.34 0.09 81.65 77.31 79.97 87.37 81.36 73.91 89.83 85.26 86.67 0.47 0.60 0.64 1.18 1.04 0.87 0.24 0.00 -0.26 HHpred5 21
22 YASARA 81.52 76.11 78.07 82.99 74.23 70.91 91.21 87.91 86.64 0.76 0.90 0.40 0.46 0.36 0.54 0.54 0.63 0.08 83.64 80.28 79.25 84.02 76.03 72.64 92.31 89.10 87.55 0.77 0.90 0.51 0.45 0.11 0.61 0.84 0.63 -0.04 YASARA 22
23 FFASstandard 77.66 72.43 76.87 83.76 68.13 70.83 83.24 80.50 84.50 0.37 0.61 0.23 0.57 -0.45 0.53 -0.45 -0.18 -0.24 86.30 82.31 79.09 84.28 76.20 73.57 94.50 94.14 90.92 1.18 1.11 0.48 0.51 0.14 0.80 1.36 1.46 0.80 FFASstandard 23
24 FFASflextemplate 77.66 72.43 76.87 83.76 68.13 70.83 83.24 80.50 84.50 0.37 0.61 0.23 0.57 -0.45 0.53 -0.45 -0.18 -0.24 78.59 72.43 76.87 84.02 79.55 70.83 83.24 80.50 84.50 -0.00 0.09 0.05 0.45 0.73 0.25 -1.33 -0.78 -0.81 FFASflextemplate 24
25 FFASsuboptimal 77.53 73.09 77.44 83.50 80.24 73.55 82.97 78.57 83.03 0.36 0.66 0.31 0.53 1.16 0.94 -0.49 -0.39 -0.46 77.66 73.09 77.52 83.50 80.24 73.55 83.79 79.03 83.19 -0.14 0.16 0.18 0.34 0.85 0.80 -1.20 -1.02 -1.14 FFASsuboptimal 25
26 METATASSER 76.73 70.08 76.33 82.47 78.35 70.23 89.83 86.91 85.57 0.28 0.42 0.16 0.38 0.91 0.44 0.37 0.52 -0.08 78.72 72.87 78.75 84.02 82.39 72.05 89.83 86.91 87.59 0.02 0.14 0.41 0.45 1.22 0.50 0.24 0.27 -0.03 METATASSER 26
27 RAPTOR 75.80 63.21 83.18 86.86 79.30 75.33 87.36 84.43 91.71 0.18 -0.12 1.09 1.04 1.04 1.21 0.06 0.25 0.85 83.38 80.89 83.18 86.86 79.30 75.33 92.86 88.09 92.29 0.73 0.97 1.25 1.07 0.68 1.15 0.97 0.47 1.15 RAPTOR 27
28 3D−JIGSAW_AEP 75.13 64.23 80.45 84.28 81.70 73.19 87.91 85.53 90.83 0.12 -0.04 0.72 0.65 1.35 0.88 0.13 0.37 0.72 75.40 70.12 80.46 85.05 81.96 73.32 90.66 86.81 90.84 -0.49 -0.15 0.74 0.68 1.15 0.75 0.44 0.26 0.78 3D−JIGSAW_AEP 28
29 Phyre_de_novo 74.47 62.32 79.86 83.50 74.91 71.94 81.87 74.91 89.04 0.05 -0.19 0.64 0.53 0.45 0.70 -0.62 -0.80 0.45 78.86 73.09 79.86 83.50 74.91 71.94 85.44 82.33 89.04 0.04 0.16 0.62 0.34 -0.08 0.47 -0.81 -0.48 0.33 Phyre_de_novo 29
30 Zhang−Server 73.94 62.77 79.95 83.25 75.34 73.31 87.64 84.52 88.65 -0.00 -0.16 0.65 0.50 0.51 0.90 0.10 0.26 0.39 79.92 77.00 79.95 83.25 78.95 74.47 87.64 84.52 88.65 0.20 0.56 0.64 0.29 0.62 0.98 -0.28 -0.12 0.23 Zhang−Server 30
31 pro−sp3−TASSER 73.40 60.02 79.44 83.50 75.60 71.26 86.54 83.42 89.91 -0.06 -0.38 0.58 0.53 0.54 0.59 -0.04 0.14 0.58 74.07 61.52 79.44 83.50 79.38 71.77 87.36 83.42 89.91 -0.69 -1.04 0.54 0.34 0.70 0.44 -0.35 -0.30 0.55 pro−sp3−TASSER 31
32 MULTICOM−RANK 73.27 64.85 76.59 86.34 78.78 72.11 78.02 71.25 82.03 -0.07 0.01 0.19 0.96 0.97 0.72 -1.10 -1.20 -0.61 73.80 64.85 80.11 86.34 81.36 73.11 85.71 78.94 89.07 -0.73 -0.69 0.67 0.95 1.04 0.71 -0.74 -1.04 0.34 MULTICOM−RANK 32
33 MUProt 73.14 59.22 80.60 84.28 74.14 72.60 86.26 79.30 89.92 -0.08 -0.44 0.74 0.65 0.35 0.80 -0.08 -0.31 0.58 73.54 59.22 80.60 84.54 79.04 72.60 87.09 82.88 89.92 -0.77 -1.27 0.76 0.57 0.64 0.61 -0.41 -0.39 0.55 MUProt 33
34 LEE−SERVER 73.00 59.80 81.12 86.08 79.72 72.30 87.36 80.40 90.99 -0.10 -0.39 0.81 0.93 1.09 0.75 0.06 -0.19 0.74 78.06 65.91 82.22 87.37 81.79 76.48 87.36 81.50 90.99 -0.08 -0.58 1.07 1.18 1.12 1.38 -0.35 -0.62 0.82 LEE−SERVER 34
35 MULTICOM−REFINE 72.74 56.74 80.27 83.50 73.37 72.02 84.89 77.93 89.59 -0.12 -0.64 0.70 0.53 0.25 0.71 -0.25 -0.46 0.53 73.94 58.51 80.65 84.28 78.69 72.75 87.36 83.15 89.89 -0.71 -1.35 0.77 0.51 0.58 0.64 -0.35 -0.35 0.55 MULTICOM−REFINE 35
36 Pcons_local 71.54 58.11 77.99 79.64 73.97 67.06 86.81 82.78 90.90 -0.24 -0.53 0.39 -0.05 0.33 -0.04 -0.01 0.07 0.73 71.54 58.11 77.99 79.64 73.97 67.06 87.64 83.79 90.90 -1.08 -1.39 0.27 -0.49 -0.24 -0.50 -0.28 -0.24 0.80 Pcons_local 36
37 Pcons_dot_net 71.54 58.11 77.99 79.64 73.97 67.06 86.81 82.78 90.90 -0.24 -0.53 0.39 -0.05 0.33 -0.04 -0.01 0.07 0.73 71.54 58.11 77.99 79.64 73.97 67.06 88.19 85.44 90.90 -1.08 -1.39 0.27 -0.49 -0.24 -0.50 -0.15 0.03 0.80 Pcons_dot_net 37
38 Fiser−M4T 71.14 60.06 82.10 85.83 76.38 75.17 86.26 81.87 89.81 -0.28 -0.37 0.95 0.89 0.65 1.18 -0.08 -0.03 0.56 71.14 60.06 82.10 85.83 76.38 75.17 86.26 81.87 89.81 -1.14 -1.19 1.05 0.84 0.18 1.12 -0.61 -0.56 0.53 Fiser−M4T 38
39 3DShot2 70.88 57.23 73.93 78.61 73.45 65.99 82.42 78.02 84.07 -0.31 -0.60 -0.17 -0.21 0.26 -0.21 -0.56 -0.45 -0.30 70.88 57.23 73.93 78.61 73.45 65.99 82.42 78.02 84.07 -1.18 -1.48 -0.50 -0.71 -0.33 -0.71 -1.53 -1.19 -0.92 3DShot2 39
40 rehtnap 70.35 66.98 53.26 57.22 50.00 29.01 89.83 88.00 83.61 -0.36 0.18 -2.99 -3.44 -2.86 -5.81 0.37 0.64 -0.37 70.61 66.98 53.26 60.05 50.43 29.01 89.83 88.00 83.61 -1.22 -0.47 -4.43 -4.70 -4.34 -8.06 0.24 0.45 -1.03 rehtnap 40
41 BioSerf 70.21 54.97 81.02 84.02 74.23 71.53 88.46 82.78 92.09 -0.38 -0.78 0.80 0.61 0.36 0.63 0.20 0.07 0.91 70.21 54.97 81.02 84.02 74.23 71.53 88.46 82.78 92.09 -1.28 -1.71 0.84 0.45 -0.20 0.39 -0.08 -0.41 1.10 BioSerf 41
42 MULTICOM−CMFR 69.81 58.38 78.31 82.22 69.84 71.39 82.97 74.72 86.94 -0.42 -0.51 0.43 0.34 -0.22 0.61 -0.49 -0.82 0.13 73.40 60.46 80.73 84.02 77.83 73.53 87.64 83.42 89.97 -0.80 -1.15 0.79 0.45 0.43 0.79 -0.28 -0.30 0.57 MULTICOM−CMFR 42
43 BAKER−ROBETTA 69.55 56.16 77.21 78.35 73.54 66.85 87.36 83.15 89.69 -0.44 -0.68 0.28 -0.24 0.27 -0.08 0.06 0.11 0.55 69.95 56.56 78.15 78.87 76.80 68.73 87.64 84.16 89.96 -1.32 -1.55 0.30 -0.65 0.25 -0.16 -0.28 -0.18 0.56 BAKER−ROBETTA 43
44 test_http_server_01 69.55 56.16 77.21 78.35 73.54 66.85 87.36 83.15 89.69 -0.44 -0.68 0.28 -0.24 0.27 -0.08 0.06 0.11 0.55 69.95 56.56 78.15 78.87 76.80 68.73 87.64 84.16 89.96 -1.32 -1.55 0.30 -0.65 0.25 -0.16 -0.28 -0.18 0.56 test_http_server_01 44
45 Pcons_multi 68.62 53.99 77.24 77.32 67.70 65.86 84.61 77.29 90.52 -0.54 -0.86 0.28 -0.40 -0.51 -0.23 -0.28 -0.53 0.67 71.54 58.11 78.77 79.90 75.77 68.24 87.09 82.88 91.17 -1.08 -1.39 0.42 -0.43 0.07 -0.26 -0.41 -0.39 0.87 Pcons_multi 45
46 MULTICOM−CLUSTER 68.48 55.01 79.07 82.99 73.71 71.45 85.99 77.56 88.29 -0.55 -0.77 0.53 0.46 0.29 0.62 -0.11 -0.50 0.33 79.12 71.68 80.52 84.79 79.30 71.95 85.99 83.42 90.60 0.08 0.01 0.75 0.62 0.68 0.48 -0.67 -0.30 0.72 MULTICOM−CLUSTER 46
47 COMA 68.35 55.27 77.92 78.87 62.72 66.37 88.74 83.79 91.38 -0.56 -0.75 0.38 -0.17 -1.17 -0.15 0.23 0.18 0.80 82.58 77.17 80.05 84.54 80.58 74.79 91.48 87.09 91.38 0.61 0.58 0.66 0.57 0.91 1.04 0.64 0.30 0.92 COMA 47
48 SAM−T08−server 68.22 55.81 73.52 81.19 76.55 69.48 89.56 87.18 84.25 -0.58 -0.71 -0.22 0.19 0.67 0.32 0.34 0.55 -0.28 85.90 80.58 77.76 83.50 77.23 70.27 93.68 92.58 88.13 1.12 0.93 0.22 0.34 0.32 0.14 1.16 1.21 0.10 SAM−T08−server 48
49 mGenTHREADER 68.08 55.41 73.51 75.77 64.95 58.43 87.91 83.70 90.48 -0.59 -0.74 -0.23 -0.64 -0.87 -1.35 0.13 0.17 0.66 68.08 55.41 73.51 75.77 64.95 58.43 87.91 83.70 90.48 -1.61 -1.67 -0.58 -1.32 -1.81 -2.21 -0.22 -0.26 0.69 mGenTHREADER 49
50 huber−torda−server 67.69 53.81 72.64 74.74 59.28 57.06 87.64 84.52 90.21 -0.63 -0.87 -0.34 -0.79 -1.63 -1.56 0.10 0.26 0.62 82.05 74.78 72.64 83.25 76.55 69.71 87.64 84.71 90.21 0.53 0.33 -0.75 0.29 0.20 0.03 -0.28 -0.09 0.63 huber−torda−server 50
51 LOOPP_Server 67.55 52.62 73.04 76.03 58.42 63.66 85.17 79.49 84.46 -0.64 -0.96 -0.29 -0.60 -1.74 -0.56 -0.21 -0.29 -0.24 77.79 72.39 73.04 80.93 78.01 68.06 85.17 79.49 84.46 -0.12 0.09 -0.67 -0.21 0.46 -0.30 -0.87 -0.95 -0.82 LOOPP_Server 51
52 GeneSilicoMetaServer 67.02 55.54 70.84 71.65 53.78 60.33 84.34 78.66 83.56 -0.70 -0.73 -0.59 -1.26 -2.36 -1.06 -0.32 -0.38 -0.38 84.84 79.97 76.53 83.76 75.00 72.06 91.48 89.83 90.96 0.96 0.87 -0.01 0.40 -0.07 0.50 0.64 0.75 0.81 GeneSilicoMetaServer 52
53 MUSTER 66.75 52.22 76.40 78.09 73.11 69.79 82.97 74.36 84.82 -0.72 -1.00 0.17 -0.28 0.21 0.37 -0.49 -0.86 -0.19 76.73 70.43 76.40 82.47 76.98 69.96 82.97 74.36 84.82 -0.29 -0.12 -0.04 0.12 0.28 0.08 -1.40 -1.79 -0.73 MUSTER 53
54 FUGUE_KM 66.49 54.34 66.52 75.26 61.68 56.24 85.17 81.32 78.93 -0.75 -0.83 -1.18 -0.71 -1.31 -1.68 -0.21 -0.09 -1.08 66.49 54.34 66.52 75.26 61.68 56.24 85.17 81.32 78.93 -1.85 -1.78 -1.91 -1.43 -2.38 -2.65 -0.87 -0.65 -2.21 FUGUE_KM 54
55 GS−MetaServer2 65.03 54.70 75.16 76.03 62.11 61.40 86.54 81.59 90.93 -0.90 -0.80 -0.00 -0.60 -1.25 -0.90 -0.04 -0.06 0.73 85.11 80.94 77.73 83.76 74.83 71.77 92.58 88.92 90.93 1.00 0.97 0.22 0.40 -0.09 0.44 0.90 0.60 0.81 GS−MetaServer2 55
56 Distill 64.89 53.99 66.27 70.62 65.46 61.02 82.69 78.85 77.72 -0.91 -0.86 -1.21 -1.42 -0.80 -0.96 -0.52 -0.36 -1.26 66.49 57.80 70.23 74.74 71.65 62.67 82.69 80.68 81.59 -1.85 -1.42 -1.21 -1.54 -0.65 -1.37 -1.46 -0.75 -1.54 Distill 56
57 Poing 63.43 51.28 70.74 73.97 67.95 58.61 84.34 74.45 84.68 -1.06 -1.07 -0.60 -0.91 -0.47 -1.33 -0.32 -0.85 -0.21 78.06 71.85 70.74 78.87 68.90 65.10 85.71 85.17 84.68 -0.08 0.03 -1.11 -0.65 -1.13 -0.89 -0.74 -0.01 -0.76 Poing 57
58 Phyre2 63.43 51.28 70.74 73.97 67.95 58.61 84.34 74.45 84.68 -1.06 -1.07 -0.60 -0.91 -0.47 -1.33 -0.32 -0.85 -0.21 78.06 71.85 70.74 78.87 68.73 65.10 85.71 85.17 84.68 -0.08 0.03 -1.11 -0.65 -1.16 -0.89 -0.74 -0.01 -0.76 Phyre2 58
59 Phragment 63.43 51.28 70.74 73.97 67.95 58.61 84.34 74.45 84.68 -1.06 -1.07 -0.60 -0.91 -0.47 -1.33 -0.32 -0.85 -0.21 78.06 71.85 70.74 78.87 68.73 65.10 85.71 85.17 84.68 -0.08 0.03 -1.11 -0.65 -1.16 -0.89 -0.74 -0.01 -0.76 Phragment 59
60 3Dpro 63.03 47.65 72.49 71.91 69.67 62.79 81.32 69.41 84.11 -1.10 -1.36 -0.37 -1.22 -0.24 -0.69 -0.69 -1.40 -0.30 72.07 67.11 72.49 74.74 69.67 64.16 81.32 69.41 84.11 -1.00 -0.46 -0.78 -1.54 -0.99 -1.07 -1.79 -2.61 -0.91 3Dpro 60
61 SAM−T06−server 61.97 50.44 70.64 81.70 71.91 67.07 84.07 73.81 82.21 -1.20 -1.14 -0.62 0.26 0.05 -0.04 -0.35 -0.92 -0.58 85.77 82.22 76.97 82.99 77.23 68.81 93.68 92.58 89.90 1.10 1.10 0.07 0.23 0.32 -0.15 1.16 1.21 0.55 SAM−T06−server 61
62 CpHModels 58.91 48.89 56.50 65.46 58.42 43.48 76.92 68.68 71.35 -1.51 -1.26 -2.55 -2.20 -1.74 -3.62 -1.24 -1.48 -2.23 58.91 48.89 56.50 65.46 58.42 43.48 76.92 68.68 71.35 -3.02 -2.34 -3.82 -3.54 -2.95 -5.19 -2.84 -2.73 -4.11 CpHModels 62
63 RBO−Proteus 25.66 22.12 33.93 49.48 42.95 51.04 31.59 30.40 40.31 -4.84 -3.39 -5.63 -4.62 -3.80 -2.47 -6.90 -5.68 -6.92 25.66 22.12 36.25 49.48 42.95 51.04 35.44 33.42 46.73 -8.11 -5.11 -7.67 -6.98 -5.64 -3.68 -12.76 -8.54 -10.30 RBO−Proteus 63
64 ACOMPMOD 25.53 22.43 15.98 48.45 43.47 39.57 29.12 23.44 16.50 -4.85 -3.36 -8.08 -4.77 -3.73 -4.21 -7.21 -6.44 -10.51 38.16 34.18 30.77 53.09 46.56 46.73 40.38 31.78 29.32 -6.20 -3.86 -8.71 -6.20 -5.02 -4.54 -11.58 -8.81 -14.67 ACOMPMOD 64
65 FOLDpro 24.87 23.63 24.16 45.10 43.56 44.42 23.63 20.51 26.16 -4.92 -3.27 -6.97 -5.28 -3.71 -3.48 -7.90 -6.76 -9.05 71.94 66.80 66.79 75.00 63.83 63.38 78.57 65.93 73.95 -1.02 -0.49 -1.86 -1.49 -2.01 -1.23 -2.45 -3.18 -3.46 FOLDpro 65
66 MUFOLD−MD 19.02 17.20 32.22 29.90 28.69 45.12 30.22 27.56 42.49 -5.51 -3.78 -5.87 -7.58 -5.69 -3.37 -7.07 -5.99 -6.59 23.14 19.50 34.03 45.10 38.06 51.75 35.71 33.24 47.52 -8.50 -5.38 -8.09 -7.92 -6.50 -3.54 -12.70 -8.57 -10.10 MUFOLD−MD 66
67 mariner1 16.09 12.72 11.02 20.88 18.64 16.75 33.24 26.46 27.41 -5.80 -4.13 -8.76 -8.95 -7.03 -7.67 -6.70 -6.11 -8.87 20.21 17.91 22.15 25.52 23.11 33.04 41.48 36.08 36.71 -8.95 -5.54 -10.35 -12.13 -9.10 -7.26 -11.32 -8.10 -12.82 mariner1 67
68 RANDOM 15.21 13.08 15.21 26.02 22.10 26.02 28.01 24.45 28.01 -5.89 -4.11 -8.19 -8.17 -6.57 -6.27 -7.35 -6.33 -8.77 15.21 13.08 15.21 26.02 22.10 26.02 28.01 24.45 28.01 -9.71 -6.04 -11.67 -12.02 -9.27 -8.66 -14.54 -10.01 -15.00 RANDOM 68
69 schenk−torda−server 12.10 11.04 -0.58 22.16 18.56 2.07 20.60 19.78 19.61 -6.20 -4.27 -10.35 -8.75 -7.04 -9.90 -8.27 -6.84 -10.04 12.10 11.04 0.68 22.16 18.56 14.87 20.60 20.05 22.14 -10.19 -6.25 -14.43 -12.85 -9.89 -10.88 -16.31 -10.74 -16.48 schenk−torda−server 69
70 OLGAFS 10.64 10.64 -28.18 17.27 17.27 -36.21 17.58 15.57 2.50 -6.35 -4.30 -14.12 -9.49 -7.21 -15.70 -8.65 -7.30 -12.63 11.97 10.64 -13.38 21.13 17.53 14.99 20.33 19.32 13.23 -10.21 -6.29 -17.10 -13.07 -10.07 -10.85 -16.38 -10.86 -18.71 OLGAFS 70
71 mahmood−torda−server 10.64 8.82 5.43 17.53 12.54 15.40 20.05 15.75 18.90 -6.35 -4.44 -9.53 -9.45 -7.84 -7.88 -8.34 -7.28 -10.15 12.10 10.68 7.97 22.42 20.70 19.44 21.70 17.03 29.40 -10.19 -6.29 -13.04 -12.80 -9.52 -9.97 -16.05 -11.24 -14.65 mahmood−torda−server 71
72 BHAGEERATH                                                       -5.89 -4.11 -8.19 -8.17 -6.57 -6.27 -7.35 -6.33 -8.77                                                       -9.71 -6.04 -11.67 -12.02 -9.27 -8.66 -14.54 -10.01 -15.00 BHAGEERATH 72
73 FALCON_CONSENSUS                                                       -5.89 -4.11 -8.19 -8.17 -6.57 -6.27 -7.35 -6.33 -8.77                                                       -9.71 -6.04 -11.67 -12.02 -9.27 -8.66 -14.54 -10.01 -15.00 FALCON_CONSENSUS 73
74 panther_server                                                       -5.89 -4.11 -8.19 -8.17 -6.57 -6.27 -7.35 -6.33 -8.77                                                       -0.80 -0.63 -11.67 -0.82 -0.54 -8.66 -1.92 -2.07 -15.00 panther_server 74