T0505

Targets
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T0505

stress response protein yhaX from Bacillus subtilis

Target type: Server only

Target sequence:

>T0505 Stress response protein yhaX, Bacillus subtilis , 290 residues
SNAMSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGFLDKFHMKR

Structure:
Method: X-ray, res=1.85Å, R/Rfree=0.17/0.21
Determined by: MCSG
PDB ID: 3dnp

3dnp cartoon
Cartoon diagram of 505: 3dnp

PyMOL of 3dnp

Domains:  PyMOL of domains

Two domains. Residue ranges in PDB: 3-82,197-277 and 83-196. Residue ranges in target: 6-85,200-280 and 86-199. Domain boundary clear.

3dnp cartoon
Cartoon diagram of 505 domains: 3dnp
N- and C-domains are colored blue and red.

505 domain evaluation plot
Correlation between weighted by the number of residues sum of GDT-TS scores for domain-based evlatuation (y, vertical axis) and whole chain GDT-TS (x, horizontal axis).

To compute the weighted sum, GDT-TS for each domain was multiplied by the domain length, and this sum was divided by the sum of domain lengths. Each point represents first server model. Green, gray and black points are top 10, bottom 25% and the rest of prediction models. Blue line is the best-fit slope line (intersection 0) to the top 10 server models. Red line is the diagonal. Slope and root mean square y-x distance for the top 10 models (average difference between the weighted sum of domain GDT-TS scores and the whole chain GDT-TS score) are shown above the plot.

Structure classification:

HAD-like fold.

CASP category:

Whole chain: Comparative modeling:medium.

1st domain: Comparative modeling:easy. 2nd domain: Comparative modeling:hard.

Closest templates:

1nf2.

Target sequence - PDB file inconsistencies:

T0505    3dnp.pdb    T0505.pdb    PyMOL    PyMOL of domains    

T0505    1 SNAMSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGFLDKFHMKR 290
           ~~~~~|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||~~~~~~~~~~
3dnpA    3 -----KQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRK---------- 277

Residue change log: change 149, 215, 230, 240, 266, 267, 273, MSE to MET;

We suggest to evaluate this target as a single domain spanning whole chain. However, evolutionarily this is a 2-domain protein:

1st domain: target 6-85, 200-280 ; pdb 3-82, 197-277

2nd domain: target 86-199 ; pdb 83-196

Sequence classification:

Haloacid dehalogenase-like hydrolase family Hydrolase_3 in Pfam.

Comments:

This protein is a close homolog of T0445 and is homologous to T0418.

Server predictions:

T0505:pdb 3-277:seq 6-280:CM_medium;   alignment

distribution of first scores
First models for T0505: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

505_1:pdb 3-82,197-277:seq 6-85,200-280:CM_easy;   alignment

distribution of first scores
First models for T0505_1: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

505_2:pdb 83-196:seq 86-199:CM_hard;   alignment

distribution of first scores
First models for T0505_2: Gaussian kernel density estimation for GDT-TS scores of the first server models, plotted at various bandwidths (=standard deviations). The GDT-TS scores are shown as a spectrum along the horizontal axis: each bar represents first server model. The bars are colored green, gray and black for top 10, bottom 25% and the rest of servers. The family of curves with varying bandwidth is shown. Bandwidth varies from 0.3 to 8.2 GDT-TS % units with a step of 0.1, which corresponds to the color ramp from magenta through blue to cyan. Thicker curves: red, yellow-framed brown and black, correspond to bandwidths 1, 2 and 4 respectively.

click on a score in the table below to display the model in PyMOL

# GROUP ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ TS ↓ TR ↓ CS ↓ ↓ GROUP #
T0505 505_1 505_2 T0505 505_1 505_2 T0505 505_1 505_2 T0505 505_1 505_2
First score First Z-score Best score Best Z-score
1 MULTICOM−REFINE 74.55 67.27 77.06 91.15 89.91 90.64 64.25 59.72 61.78 1.54 1.30 1.14 1.31 1.69 1.08 1.06 1.72 0.73 75.09 67.61 78.25 91.61 89.91 91.77 67.33 62.50 63.82 1.54 1.03 1.17 1.29 1.38 1.36 1.39 1.48 0.32 MULTICOM−REFINE 1
2 MULTICOM−RANK 73.82 64.36 77.28 92.08 90.42 91.14 65.57 56.94 61.44 1.37 0.81 1.19 1.56 1.78 1.23 1.34 1.17 0.69 73.82 67.61 77.37 92.08 90.42 91.14 65.57 62.57 63.45 1.20 1.03 0.92 1.44 1.48 1.14 0.92 1.49 0.27 MULTICOM−RANK 2
3 LEE−SERVER 73.64 60.85 75.46 90.99 88.30 91.22 60.53 52.48 56.88 1.33 0.21 0.78 1.26 1.41 1.25 0.26 0.29 0.08 73.82 67.27 75.82 90.99 88.77 91.29 62.28 58.33 57.70 1.20 0.96 0.49 1.10 1.16 1.19 0.05 0.64 -0.54 LEE−SERVER 3
4 MULTICOM−CLUSTER 73.36 65.30 76.94 91.15 89.08 90.92 64.91 56.87 61.18 1.26 0.97 1.11 1.31 1.54 1.16 1.20 1.16 0.65 75.91 69.36 79.42 91.46 89.29 91.47 66.45 63.09 66.42 1.75 1.36 1.49 1.25 1.26 1.26 1.16 1.60 0.69 MULTICOM−CLUSTER 4
5 Zhang−Server 72.82 63.70 73.99 90.68 87.68 90.25 61.62 52.27 55.68 1.14 0.70 0.45 1.18 1.29 0.97 0.49 0.25 -0.08 72.91 67.82 75.40 90.99 88.61 91.37 62.06 54.90 57.75 0.96 1.07 0.38 1.10 1.13 1.22 -0.01 -0.04 -0.54 Zhang−Server 5
6 pro−sp3−TASSER 72.36 61.21 73.77 90.37 73.29 89.72 61.40 52.48 55.40 1.03 0.27 0.40 1.09 -1.27 0.82 0.44 0.29 -0.11 72.82 63.79 74.61 90.37 87.53 89.72 63.38 56.21 58.82 0.94 0.29 0.16 0.91 0.92 0.66 0.34 0.22 -0.39 pro−sp3−TASSER 6
7 GS−MetaServer2 72.18 65.82 77.25 89.13 87.16 88.77 63.82 56.51 64.14 0.99 1.06 1.18 0.76 1.20 0.55 0.97 1.09 1.05 72.18 65.82 77.25 89.13 87.16 88.77 63.82 56.51 68.34 0.77 0.68 0.89 0.54 0.85 0.33 0.46 0.28 0.96 GS−MetaServer2 7
8 COMA−M 72.09 66.27 78.60 89.44 82.61 89.15 64.25 54.02 67.16 0.97 1.13 1.48 0.84 0.39 0.66 1.06 0.60 1.45 72.09 66.27 80.56 89.44 87.06 90.17 69.52 64.98 71.09 0.74 0.77 1.81 0.63 0.83 0.81 1.97 1.97 1.35 COMA−M 8
9 RAPTOR 72.00 62.18 80.53 86.65 80.75 89.67 70.61 63.89 70.65 0.95 0.44 1.91 0.09 0.06 0.81 2.43 2.55 1.91 72.55 62.42 80.58 86.80 81.57 89.83 71.05 63.89 70.65 0.87 0.03 1.81 -0.17 -0.25 0.69 2.38 1.76 1.29 RAPTOR 9
10 MUProt 71.82 64.42 75.23 91.15 88.67 91.80 61.62 50.66 55.82 0.91 0.82 0.73 1.31 1.47 1.41 0.49 -0.07 -0.06 74.36 67.27 77.34 91.61 89.70 91.89 63.82 58.84 62.11 1.34 0.96 0.91 1.29 1.34 1.40 0.46 0.75 0.08 MUProt 10
11 Phyre_de_novo 71.82 62.67 76.64 88.82 79.09 89.46 64.91 55.99 62.67 0.91 0.52 1.04 0.67 -0.24 0.75 1.20 0.99 0.85 71.82 62.79 76.64 89.29 79.09 89.49 65.79 60.53 70.88 0.67 0.10 0.72 0.58 -0.73 0.58 0.98 1.08 1.32 Phyre_de_novo 11
12 FFASsuboptimal 71.18 66.21 76.85 88.51 76.92 89.15 62.28 53.07 62.45 0.76 1.12 1.09 0.59 -0.62 0.66 0.63 0.41 0.82 71.18 66.21 76.85 88.51 86.33 89.15 62.50 53.29 62.45 0.50 0.76 0.78 0.35 0.68 0.46 0.11 -0.36 0.13 FFASsuboptimal 12
13 FAMSD 71.09 65.33 76.57 88.67 82.76 88.07 61.40 48.39 63.40 0.74 0.97 1.03 0.63 0.42 0.35 0.44 -0.52 0.95 71.09 65.33 76.57 88.67 85.40 88.07 62.72 53.44 68.11 0.48 0.59 0.70 0.40 0.50 0.09 0.17 -0.33 0.93 FAMSD 13
14 SAM−T08−server 71.00 65.61 77.17 86.65 79.81 89.41 61.84 57.90 62.36 0.72 1.02 1.16 0.09 -0.11 0.73 0.54 1.36 0.81 71.00 65.61 77.17 87.58 81.78 89.41 62.94 57.90 62.36 0.46 0.64 0.87 0.06 -0.20 0.55 0.22 0.56 0.12 SAM−T08−server 14
15 METATASSER 71.00 60.64 71.56 88.04 84.32 85.92 61.84 53.95 56.15 0.72 0.18 -0.09 0.46 0.70 -0.26 0.54 0.58 -0.02 71.00 63.94 71.63 88.97 87.42 87.02 61.84 54.75 57.32 0.46 0.32 -0.67 0.49 0.90 -0.27 -0.07 -0.07 -0.60 METATASSER 15
16 circle 70.82 65.12 76.55 88.51 82.92 88.04 61.40 49.12 63.41 0.68 0.94 1.02 0.59 0.45 0.34 0.44 -0.37 0.95 71.00 65.58 76.63 88.67 83.33 88.17 61.84 49.12 63.41 0.46 0.64 0.72 0.40 0.10 0.13 -0.07 -1.20 0.26 circle 16
17 GS−KudlatyPred 70.73 66.79 76.77 89.75 87.58 90.68 58.55 52.85 60.17 0.66 1.22 1.07 0.93 1.28 1.09 -0.17 0.37 0.52 71.55 66.94 76.77 89.75 87.99 90.68 62.06 55.77 60.60 0.60 0.90 0.76 0.72 1.01 0.99 -0.01 0.13 -0.13 GS−KudlatyPred 17
18 Phragment 70.64 61.42 73.04 88.82 78.36 89.13 60.31 49.34 54.20 0.63 0.31 0.24 0.67 -0.37 0.65 0.21 -0.33 -0.27 70.64 61.42 74.44 88.82 78.36 89.13 66.01 61.91 70.39 0.36 -0.16 0.11 0.44 -0.87 0.45 1.04 1.36 1.25 Phragment 18
19 Phyre2 70.45 63.61 73.05 88.67 85.35 89.16 60.31 49.34 54.20 0.59 0.68 0.24 0.63 0.88 0.66 0.21 -0.33 -0.27 70.45 63.61 74.36 88.67 85.35 89.16 66.01 61.91 70.39 0.31 0.26 0.09 0.40 0.49 0.47 1.04 1.36 1.25 Phyre2 19
20 FFASflextemplate 70.36 64.24 71.92 88.20 86.13 88.80 59.21 49.71 52.29 0.57 0.79 -0.01 0.51 1.02 0.56 -0.03 -0.26 -0.53 70.45 64.24 71.92 88.20 86.23 88.80 59.65 52.92 54.42 0.31 0.38 -0.59 0.25 0.66 0.34 -0.65 -0.44 -1.01 FFASflextemplate 20
21 Poing 70.36 63.15 72.79 88.51 75.47 88.73 60.31 49.34 54.20 0.57 0.60 0.19 0.59 -0.88 0.54 0.21 -0.33 -0.27 70.36 63.15 74.29 88.51 77.95 88.73 66.01 61.91 70.39 0.29 0.17 0.07 0.35 -0.95 0.32 1.04 1.36 1.25 Poing 21
22 MUSTER 70.27 64.82 71.52 89.91 85.66 89.94 57.24 47.73 49.38 0.55 0.89 -0.10 0.97 0.93 0.88 -0.45 -0.65 -0.91 70.27 64.82 77.31 89.91 85.66 89.94 69.08 63.82 74.65 0.26 0.49 0.91 0.77 0.55 0.73 1.85 1.74 1.86 MUSTER 22
23 BAKER−ROBETTA 70.27 64.52 71.24 90.53 88.56 90.34 57.02 49.71 48.01 0.55 0.83 -0.16 1.14 1.45 1.00 -0.50 -0.26 -1.10 71.55 66.94 76.77 90.53 88.56 90.68 59.43 52.85 60.17 0.60 0.90 0.76 0.96 1.12 0.99 -0.71 -0.45 -0.19 BAKER−ROBETTA 23
24 FFASstandard 70.27 64.45 72.01 88.35 86.59 89.23 57.90 50.88 51.84 0.55 0.82 0.01 0.55 1.10 0.68 -0.31 -0.02 -0.59 70.36 64.45 73.24 88.35 86.59 89.23 59.21 52.92 58.40 0.29 0.42 -0.22 0.30 0.73 0.49 -0.77 -0.44 -0.45 FFASstandard 24
25 forecast 70.09 60.21 75.65 85.25 72.41 86.78 62.72 56.14 62.86 0.51 0.10 0.82 -0.29 -1.43 -0.02 0.73 1.02 0.88 70.09 65.00 75.72 88.35 86.49 87.65 62.72 56.14 63.01 0.22 0.53 0.47 0.30 0.71 -0.05 0.17 0.21 0.21 forecast 25
26 HHpred2 70.09 59.79 77.06 84.63 73.14 86.86 64.91 62.13 66.86 0.51 0.03 1.14 -0.46 -1.30 0.01 1.20 2.20 1.41 70.09 59.79 77.06 84.63 73.14 86.86 64.91 62.13 66.86 0.22 -0.47 0.84 -0.84 -1.89 -0.32 0.75 1.40 0.75 HHpred2 26
27 pipe_int 70.00 62.82 73.99 88.97 83.80 89.54 60.09 49.41 56.11 0.49 0.55 0.45 0.72 0.60 0.77 0.16 -0.32 -0.02 70.45 63.79 74.07 88.97 83.80 89.54 60.09 49.41 56.56 0.31 0.29 0.01 0.49 0.19 0.60 -0.53 -1.14 -0.71 pipe_int 27
28 PS2−server 70.00 62.61 73.66 89.29 83.59 89.14 58.55 48.90 55.77 0.49 0.51 0.38 0.80 0.57 0.66 -0.17 -0.42 -0.07 70.00 62.61 75.85 89.29 83.59 89.14 62.28 59.06 64.42 0.19 0.07 0.50 0.58 0.15 0.46 0.05 0.79 0.41 PS2−server 28
29 3DShot2 69.73 60.45 72.19 86.80 81.31 86.87 61.62 52.70 55.23 0.42 0.14 0.05 0.13 0.16 0.01 0.49 0.34 -0.14 69.73 60.45 72.19 86.80 81.31 86.87 61.62 52.70 55.23 0.12 -0.35 -0.51 -0.17 -0.30 -0.32 -0.13 -0.48 -0.89 3DShot2 29
30 LOOPP_Server 69.64 65.64 73.89 87.89 77.95 87.73 59.21 49.12 57.60 0.40 1.02 0.43 0.42 -0.44 0.26 -0.03 -0.37 0.18 69.64 65.64 73.89 87.89 77.95 87.73 62.28 52.05 60.30 0.10 0.65 -0.04 0.16 -0.95 -0.02 0.05 -0.61 -0.18 LOOPP_Server 30
31 SAM−T02−server 69.64 63.52 70.86 87.89 85.61 88.69 58.55 48.32 49.80 0.40 0.66 -0.24 0.42 0.93 0.53 -0.17 -0.53 -0.86 69.64 63.52 74.66 87.89 85.61 88.69 62.72 56.43 62.01 0.10 0.24 0.17 0.16 0.54 0.30 0.17 0.26 0.07 SAM−T02−server 31
32 Pcons_local 69.00 65.12 71.88 87.89 85.51 88.35 57.90 45.61 52.29 0.25 0.94 -0.02 0.42 0.91 0.43 -0.31 -1.07 -0.53 70.00 65.12 72.77 87.89 85.51 88.42 64.91 53.80 68.01 0.19 0.55 -0.35 0.16 0.52 0.21 0.75 -0.26 0.92 Pcons_local 32
33 Pcons_dot_net 69.00 65.12 71.88 87.89 85.51 88.35 57.90 45.61 52.29 0.25 0.94 -0.02 0.42 0.91 0.43 -0.31 -1.07 -0.53 70.00 65.12 72.25 87.89 85.51 88.42 60.31 49.78 55.62 0.19 0.55 -0.49 0.16 0.52 0.21 -0.47 -1.07 -0.84 Pcons_dot_net 33
34 Pcons_multi 69.00 65.12 71.88 87.89 85.51 88.35 57.90 45.61 52.29 0.25 0.94 -0.02 0.42 0.91 0.43 -0.31 -1.07 -0.53 70.00 65.12 75.64 90.06 88.30 90.60 59.65 52.05 58.68 0.19 0.55 0.44 0.82 1.07 0.96 -0.65 -0.61 -0.41 Pcons_multi 34
35 keasar−server 68.82 64.15 68.63 89.91 85.97 89.28 52.63 43.13 43.76 0.21 0.77 -0.74 0.97 0.99 0.70 -1.45 -1.56 -1.66 70.91 64.91 76.18 90.06 87.37 89.91 64.25 58.99 64.40 0.43 0.51 0.59 0.82 0.89 0.72 0.57 0.78 0.40 keasar−server 35
36 GeneSilicoMetaServer 68.82 63.61 70.27 88.67 79.66 89.17 55.48 45.83 47.62 0.21 0.68 -0.38 0.63 -0.14 0.67 -0.83 -1.02 -1.15 72.18 65.82 77.25 89.29 87.16 89.26 63.82 58.04 64.48 0.77 0.68 0.89 0.58 0.85 0.50 0.46 0.59 0.42 GeneSilicoMetaServer 36
37 mariner1 68.82 56.45 71.46 88.97 84.21 88.90 57.02 47.08 52.17 0.21 -0.54 -0.11 0.72 0.68 0.59 -0.50 -0.78 -0.54 70.91 66.48 74.54 88.97 84.21 88.90 64.03 57.16 65.59 0.43 0.81 0.14 0.49 0.27 0.38 0.51 0.41 0.57 mariner1 37
38 3D−JIGSAW_AEP 68.73 58.91 73.42 85.87 72.93 86.86 61.18 55.34 58.86 0.19 -0.12 0.33 -0.12 -1.34 0.01 0.40 0.86 0.34 68.73 58.91 73.42 85.87 72.93 86.89 61.18 55.34 58.86 -0.14 -0.64 -0.17 -0.46 -1.93 -0.31 -0.24 0.05 -0.38 3D−JIGSAW_AEP 38
39 SAM−T06−server 68.55 58.73 75.67 84.16 77.12 86.69 62.94 55.04 63.24 0.15 -0.15 0.83 -0.59 -0.59 -0.04 0.78 0.80 0.93 68.82 63.24 75.67 87.42 84.52 88.11 62.94 55.04 63.24 -0.12 0.19 0.45 0.01 0.33 0.11 0.22 -0.01 0.24 SAM−T06−server 39
40 COMA 68.36 58.12 72.37 84.63 74.28 86.41 60.53 57.60 56.82 0.11 -0.25 0.09 -0.46 -1.10 -0.12 0.26 1.30 0.07 72.00 66.12 80.56 89.29 79.76 90.17 64.47 57.82 71.09 0.72 0.74 1.81 0.58 -0.60 0.81 0.63 0.54 1.35 COMA 40
41 rehtnap 68.18 59.76 67.48 86.80 79.45 85.53 55.70 46.34 46.57 0.06 0.03 -1.00 0.13 -0.17 -0.37 -0.79 -0.92 -1.29 68.18 60.27 67.48 86.80 80.12 85.53 57.02 49.71 46.75 -0.29 -0.38 -1.82 -0.17 -0.53 -0.78 -1.35 -1.08 -2.10 rehtnap 41
42 3D−JIGSAW_V3 67.91 57.12 72.57 84.63 71.07 85.85 60.31 54.60 58.23 0.00 -0.42 0.14 -0.46 -1.67 -0.28 0.21 0.71 0.26 68.64 59.36 72.99 85.56 77.69 86.68 61.18 55.85 58.24 -0.17 -0.55 -0.29 -0.55 -1.00 -0.38 -0.24 0.15 -0.47 3D−JIGSAW_V3 42
43 mGenTHREADER 67.82 63.70 68.40 87.42 81.62 87.14 55.48 46.27 46.00 -0.02 0.70 -0.79 0.30 0.21 0.09 -0.83 -0.94 -1.36 67.82 63.70 68.40 87.42 81.62 87.14 55.48 46.27 46.00 -0.38 0.28 -1.56 0.01 -0.24 -0.23 -1.76 -1.77 -2.20 mGenTHREADER 43
44 BioSerf 67.73 58.09 71.33 87.42 85.25 88.60 57.90 44.59 51.84 -0.04 -0.26 -0.14 0.30 0.86 0.50 -0.31 -1.27 -0.59 67.73 58.09 71.33 87.42 85.25 88.60 57.90 44.59 51.84 -0.41 -0.80 -0.75 0.01 0.47 0.27 -1.11 -2.10 -1.37 BioSerf 44
45 FEIG 67.64 54.58 74.08 86.18 83.18 83.86 65.79 57.02 66.56 -0.06 -0.85 0.47 -0.04 0.49 -0.85 1.39 1.19 1.37 70.09 64.76 74.17 89.44 87.27 89.62 67.98 60.23 67.36 0.22 0.48 0.04 0.63 0.87 0.62 1.56 1.02 0.82 FEIG 45
46 MUFOLD−Server 67.09 57.82 74.20 81.52 73.76 85.05 62.06 52.27 62.09 -0.19 -0.30 0.50 -1.30 -1.19 -0.51 0.59 0.25 0.77 67.09 57.82 74.20 81.52 73.76 85.05 62.50 53.07 62.09 -0.57 -0.85 0.04 -1.79 -1.77 -0.94 0.11 -0.41 0.08 MUFOLD−Server 46
47 CpHModels 66.09 57.73 68.64 78.11 70.55 74.16 64.25 54.90 65.61 -0.42 -0.32 -0.74 -2.23 -1.76 -3.61 1.06 0.77 1.24 66.09 57.73 68.64 78.11 70.55 74.16 64.25 54.90 65.61 -0.84 -0.87 -1.49 -2.82 -2.40 -4.67 0.57 -0.04 0.58 CpHModels 47
48 FALCON_CONSENSUS 65.45 53.88 74.66 80.28 75.21 83.10 62.72 55.56 67.63 -0.57 -0.97 0.60 -1.64 -0.93 -1.06 0.73 0.90 1.51 65.45 53.88 74.66 80.28 75.21 83.10 62.72 55.56 67.63 -1.01 -1.60 0.17 -2.16 -1.49 -1.61 0.17 0.09 0.86 FALCON_CONSENSUS 48
49 MULTICOM−CMFR 64.45 56.70 68.00 86.65 82.30 87.49 49.34 40.57 45.01 -0.80 -0.49 -0.88 0.09 0.34 0.19 -2.16 -2.06 -1.50 73.00 65.42 75.37 90.84 88.15 91.36 62.06 53.87 57.45 0.98 0.61 0.37 1.06 1.04 1.22 -0.01 -0.25 -0.58 MULTICOM−CMFR 49
50 huber−torda−server 63.73 57.36 65.11 84.16 75.36 86.10 47.59 42.33 39.41 -0.97 -0.38 -1.52 -0.59 -0.90 -0.21 -2.54 -1.71 -2.24 66.36 60.91 66.48 87.27 84.99 86.67 54.17 47.81 42.57 -0.77 -0.26 -2.09 -0.03 0.42 -0.39 -2.10 -1.46 -2.69 huber−torda−server 50
51 PSI 63.27 52.85 65.74 80.90 74.59 83.07 49.12 42.10 46.04 -1.07 -1.15 -1.38 -1.47 -1.04 -1.07 -2.21 -1.76 -1.36 68.09 61.33 72.67 85.40 82.30 85.48 57.67 53.00 57.70 -0.31 -0.18 -0.38 -0.60 -0.10 -0.79 -1.17 -0.42 -0.54 PSI 51
52 Fiser−M4T 62.91 56.00 64.86 80.12 77.33 81.51 53.51 43.49 46.06 -1.16 -0.61 -1.58 -1.68 -0.55 -1.52 -1.26 -1.49 -1.36 62.91 56.00 64.86 80.12 77.33 81.51 53.51 43.49 46.06 -1.68 -1.20 -2.54 -2.21 -1.07 -2.15 -2.28 -2.32 -2.19 Fiser−M4T 52
53 fais−server 61.64 47.21 73.28 82.76 80.07 82.98 63.38 54.46 68.98 -1.45 -2.11 0.29 -0.97 -0.06 -1.10 0.87 0.68 1.69 72.09 67.73 76.98 89.44 85.82 89.31 63.38 54.46 68.98 0.74 1.05 0.81 0.63 0.58 0.52 0.34 -0.13 1.05 fais−server 53
54 HHpred4 60.91 47.21 74.02 82.92 77.74 82.69 64.69 59.72 70.97 -1.62 -2.11 0.46 -0.92 -0.48 -1.18 1.15 1.72 1.95 60.91 47.21 74.02 82.92 77.74 82.69 64.69 59.72 70.97 -2.21 -2.88 -0.00 -1.36 -0.99 -1.75 0.69 0.92 1.33 HHpred4 54
55 nFOLD3 60.55 49.12 67.20 81.52 78.52 82.45 58.11 49.49 54.67 -1.71 -1.78 -1.06 -1.30 -0.34 -1.25 -0.27 -0.30 -0.21 69.55 63.61 73.21 87.89 81.88 88.15 62.94 55.34 69.89 0.07 0.26 -0.23 0.16 -0.19 0.12 0.22 0.05 1.18 nFOLD3 55
56 panther_server 60.45 51.36 65.19 83.54 79.71 82.71 54.83 51.46 48.43 -1.73 -1.40 -1.51 -0.76 -0.13 -1.17 -0.97 0.09 -1.04 68.64 61.91 69.08 86.96 82.50 85.28 57.90 51.46 51.22 -0.17 -0.07 -1.37 -0.13 -0.06 -0.86 -1.11 -0.73 -1.46 panther_server 56
57 HHpred5 60.45 47.12 74.04 82.14 79.24 82.70 66.45 61.33 71.04 -1.73 -2.12 0.46 -1.14 -0.21 -1.18 1.53 2.04 1.96 60.45 47.12 74.04 82.14 79.24 82.70 66.45 61.33 71.04 -2.33 -2.90 0.00 -1.60 -0.70 -1.75 1.16 1.24 1.34 HHpred5 57
58 3Dpro 60.18 50.48 63.66 82.45 77.38 81.41 45.61 43.13 44.18 -1.79 -1.55 -1.85 -1.05 -0.54 -1.54 -2.96 -1.56 -1.61 60.36 53.64 64.29 82.45 77.38 82.46 46.71 44.37 44.18 -2.35 -1.65 -2.70 -1.50 -1.06 -1.83 -4.08 -2.15 -2.46 3Dpro 58
59 FUGUE_KM 60.09 47.97 66.92 81.52 78.52 81.97 58.33 49.27 54.73 -1.81 -1.98 -1.12 -1.30 -0.34 -1.38 -0.22 -0.34 -0.20 60.09 47.97 66.92 81.52 78.52 81.97 58.33 49.27 54.73 -2.42 -2.74 -1.97 -1.79 -0.84 -2.00 -1.00 -1.17 -0.97 FUGUE_KM 59
60 YASARA 58.27 48.48 66.39 82.14 74.28 85.22 50.44 46.34 46.70 -2.23 -1.89 -1.24 -1.14 -1.10 -0.46 -1.92 -0.92 -1.27 69.36 65.61 73.82 89.44 85.51 89.00 57.24 47.30 56.13 0.02 0.64 -0.06 0.63 0.52 0.41 -1.29 -1.56 -0.77 YASARA 60
61 Distill 57.91 52.21 55.35 73.91 68.22 72.96 48.03 42.18 36.65 -2.32 -1.26 -3.70 -3.37 -2.18 -3.95 -2.44 -1.74 -2.61 58.55 52.42 55.35 76.24 68.58 72.96 48.03 43.06 37.97 -2.83 -1.88 -5.17 -3.40 -2.78 -5.08 -3.73 -2.41 -3.34 Distill 61
62 Pushchino 56.82 46.24 59.26 79.81 64.70 82.01 48.47 43.64 34.54 -2.57 -2.27 -2.83 -1.77 -2.80 -1.37 -2.35 -1.46 -2.89 56.82 46.24 59.26 79.81 64.70 82.01 48.47 43.64 34.54 -3.28 -3.07 -4.09 -2.31 -3.54 -1.98 -3.62 -2.29 -3.82 Pushchino 62
63 FALCON 55.64 45.88 56.24 62.42 57.87 54.71 61.62 53.87 66.17 -2.84 -2.33 -3.50 -6.48 -4.02 -9.14 0.49 0.57 1.32 55.64 45.88 74.66 62.42 57.87 83.10 61.62 53.87 67.63 -3.60 -3.14 0.17 -7.61 -4.87 -1.61 -0.13 -0.25 0.86 FALCON 63
64 ACOMPMOD 50.55 43.27 54.11 72.98 66.87 75.72 29.82 23.39 31.31 -4.02 -2.77 -3.97 -3.62 -2.42 -3.16 -6.37 -5.46 -3.32 58.36 48.67 65.71 79.66 74.38 78.12 58.77 50.29 57.95 -2.88 -2.60 -2.31 -2.35 -1.65 -3.31 -0.88 -0.96 -0.51 ACOMPMOD 64
65 FOLDpro 25.91 21.42 21.72 43.01 35.35 36.71 15.35 12.43 14.50 -9.74 -6.49 -11.18 -11.74 -8.04 -14.27 -9.49 -7.63 -5.55 27.91 23.12 24.49 46.27 39.13 40.11 20.61 17.69 25.70 -10.91 -7.50 -13.72 -12.53 -8.53 -16.33 -11.01 -7.48 -5.08 FOLDpro 65
66 RBO−Proteus 25.45 23.09 51.08 40.22 34.42 66.64 27.41 25.80 40.34 -9.84 -6.20 -4.65 -12.49 -8.20 -5.75 -6.89 -4.98 -2.12 25.45 23.09 51.28 40.22 35.35 66.93 28.73 26.61 41.27 -11.56 -7.50 -6.30 -14.38 -9.27 -7.15 -8.86 -5.70 -2.87 RBO−Proteus 66
67 MUFOLD−MD 22.18 17.94 50.34 35.71 28.21 60.68 31.58 26.10 46.88 -10.60 -7.08 -4.81 -13.72 -9.31 -7.44 -5.99 -4.92 -1.25 25.91 20.76 50.34 39.75 31.68 62.45 32.46 30.56 46.95 -11.44 -7.95 -6.56 -14.52 -9.99 -8.68 -7.87 -4.91 -2.07 MUFOLD−MD 67
68 RANDOM 10.00 8.00 10.00 16.83 13.88 16.83 17.48 14.44 17.48 -13.42 -8.77 -13.79 -18.83 -11.87 -19.93 -9.03 -7.23 -5.15 10.00 8.00 10.00 16.83 13.88 16.83 17.48 14.44 17.48 -15.64 -10.39 -17.73 -21.51 -13.47 -24.30 -11.85 -8.13 -6.24 RANDOM 68
69 OLGAFS 9.46 8.39 6.42 14.13 12.47 12.32 14.04 11.55 13.77 -13.55 -8.70 -14.59 -19.56 -12.12 -21.21 -9.78 -7.80 -5.65 9.64 8.82 6.42 14.44 12.47 12.32 15.13 11.70 16.72 -15.73 -10.23 -18.72 -22.24 -13.74 -25.85 -12.47 -8.68 -6.35 OLGAFS 69
70 schenk−torda−server 8.00 7.12 9.46 11.03 9.06 13.59 17.32 14.98 19.88 -13.89 -8.92 -13.91 -20.40 -12.73 -20.85 -9.07 -7.12 -4.83 8.27 7.12 9.46 12.42 10.97 17.10 17.32 14.98 19.88 -16.09 -10.56 -17.88 -22.86 -14.03 -24.21 -11.89 -8.02 -5.90 schenk−torda−server 70
71 BHAGEERATH                                                       -13.42 -8.77 -13.79 -18.83 -11.87 -19.93 -9.03 -7.23 -5.15                                                       -15.64 -10.39 -17.73 -21.51 -13.47 -24.30 -11.85 -8.13 -6.24 BHAGEERATH 71
72 Frankenstein                                                       -13.42 -8.77 -13.79 -18.83 -11.87 -19.93 -9.03 -7.23 -5.15                                                       -15.64 -10.39 -17.73 -21.51 -13.47 -24.30 -11.85 -8.13 -6.24 Frankenstein 72
73 mahmood−torda−server                                                       -13.42 -8.77 -13.79 -18.83 -11.87 -19.93 -9.03 -7.23 -5.15                                                       -15.64 -10.39 -17.73 -21.51 -13.47 -24.30 -11.85 -8.13 -6.24 mahmood−torda−server 73
74 test_http_server_01                                                       -13.42 -8.77 -13.79 -18.83 -11.87 -19.93 -9.03 -7.23 -5.15                                                       -15.64 -10.39 -17.73 -21.51 -13.47 -24.30 -11.85 -8.13 -6.24 test_http_server_01 74