List of proteins associated with GO term: GO:0004843   ubiquitin-specific protease activity
Protein ID
Link to complete
analysis report

Confident Level
for GO:0004843
All predicted GO Terms
1g021435m confident GO:0004843, confident, ubiquitin-specific protease activity
GO:0048366, confident, leaf development
GO:0010016, confident, shoot system morphogenesis
GO:0016567, portable, protein ubiquitination
GO:0010388, portable, cullin deneddylation
GO:0016571, portable, histone methylation
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0008242, portable, omega peptidase activity
GO:0016579, portable, protein deubiquitination
GO:0009640, portable, photomorphogenesis
GO:0005730, portable, nucleolus
GO:0070628, portable, proteasome binding
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005829, portable, cytosol
GO:0031011, portable, Ino80 complex
GO:0000502, portable, proteasome complex
GO:0010951, portable, negative regulation of endopeptidase activity
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0032268, portable, regulation of cellular protein metabolic process
GO:0034399, portable, nuclear periphery
1g019907m confident GO:0004843, confident, ubiquitin-specific protease activity
GO:0048366, confident, leaf development
GO:0010016, confident, shoot system morphogenesis
GO:0070628, portable, proteasome binding
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0016567, portable, protein ubiquitination
GO:0005829, portable, cytosol
GO:0031011, portable, Ino80 complex
GO:0010388, portable, cullin deneddylation
GO:0016571, portable, histone methylation
GO:0000502, portable, proteasome complex
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0010951, portable, negative regulation of endopeptidase activity
GO:0034399, portable, nuclear periphery
GO:0008242, portable, omega peptidase activity
GO:0009640, portable, photomorphogenesis
GO:0048853, portable, forebrain morphogenesis
GO:0005730, portable, nucleolus
GO:0021670, portable, lateral ventricle development
GO:0035522, portable, monoubiquitinated histone H2A deubiquitination
GO:0061136, portable, regulation of proteasomal protein catabolic process
GO:0007179, portable, transforming growth factor beta receptor signaling pathway
GO:0006310, portable, DNA recombination
GO:0006351, portable, transcription, DNA-dependent
GO:0004866, portable, endopeptidase inhibitor activity
GO:0006281, portable, DNA repair
GO:0030901, portable, midbrain development
GO:0003682, portable, chromatin binding
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0030512, portable, negative regulation of transforming growth factor beta receptor signaling pathway
1g019925m confident GO:0004843, confident, ubiquitin-specific protease activity
GO:0048366, confident, leaf development
GO:0010016, confident, shoot system morphogenesis
GO:0070628, portable, proteasome binding
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0016567, portable, protein ubiquitination
GO:0005829, portable, cytosol
GO:0031011, portable, Ino80 complex
GO:0010388, portable, cullin deneddylation
GO:0016571, portable, histone methylation
GO:0000502, portable, proteasome complex
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0010951, portable, negative regulation of endopeptidase activity
GO:0034399, portable, nuclear periphery
GO:0008242, portable, omega peptidase activity
GO:0009640, portable, photomorphogenesis
GO:0048853, portable, forebrain morphogenesis
GO:0005730, portable, nucleolus
GO:0021670, portable, lateral ventricle development
GO:0035522, portable, monoubiquitinated histone H2A deubiquitination
GO:0061136, portable, regulation of proteasomal protein catabolic process
GO:0007179, portable, transforming growth factor beta receptor signaling pathway
GO:0006310, portable, DNA recombination
GO:0006351, portable, transcription, DNA-dependent
GO:0004866, portable, endopeptidase inhibitor activity
GO:0006281, portable, DNA repair
GO:0030901, portable, midbrain development
GO:0003682, portable, chromatin binding
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0030512, portable, negative regulation of transforming growth factor beta receptor signaling pathway
1g021248m confident GO:0004843, confident, ubiquitin-specific protease activity
GO:0048366, confident, leaf development
GO:0010016, confident, shoot system morphogenesis
GO:0070628, portable, proteasome binding
GO:0016567, portable, protein ubiquitination
GO:0005829, portable, cytosol
GO:0031011, portable, Ino80 complex
GO:0010388, portable, cullin deneddylation
GO:0016571, portable, histone methylation
GO:0000502, portable, proteasome complex
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0010951, portable, negative regulation of endopeptidase activity
GO:0034399, portable, nuclear periphery
GO:0008242, portable, omega peptidase activity
GO:0016579, portable, protein deubiquitination
GO:0009640, portable, photomorphogenesis
GO:0048853, portable, forebrain morphogenesis
GO:0005730, portable, nucleolus
GO:0021670, portable, lateral ventricle development
GO:0061136, portable, regulation of proteasomal protein catabolic process
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0007179, portable, transforming growth factor beta receptor signaling pathway
GO:0004866, portable, endopeptidase inhibitor activity
GO:0030901, portable, midbrain development
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0030512, portable, negative regulation of transforming growth factor beta receptor signaling pathway
1g001393m confident GO:0005829, confident, cytosol
GO:0009506, confident, plasmodesma
GO:0004843, confident, ubiquitin-specific protease activity
GO:0005634, confident, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0006007, portable, glucose catabolic process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009630, portable, gravitropism
GO:0016579, portable, protein deubiquitination
GO:0005794, portable, Golgi apparatus
GO:0033554, portable, cellular response to stress
GO:0005515, portable, protein binding
GO:0006897, portable, endocytosis
1g001246m confident GO:0005829, confident, cytosol
GO:0009506, confident, plasmodesma
GO:0004843, confident, ubiquitin-specific protease activity
GO:0005634, confident, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0006007, portable, glucose catabolic process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009630, portable, gravitropism
GO:0016579, portable, protein deubiquitination
GO:0005794, portable, Golgi apparatus
GO:0033554, portable, cellular response to stress
GO:0005515, portable, protein binding
GO:0006897, portable, endocytosis
1g017540m confident GO:0004221, confident, ubiquitin thiolesterase activity
GO:0004197, confident, cysteine-type endopeptidase activity
GO:0004843, confident, ubiquitin-specific protease activity
GO:0032228, portable, regulation of synaptic transmission, GABAergic
GO:0006499, portable, N-terminal protein myristoylation
GO:0009755, portable, hormone-mediated signaling pathway
GO:0006007, portable, glucose catabolic process
GO:0001662, portable, behavioral fear response
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0005515, portable, protein binding
GO:0043232, portable, intracellular non-membrane-bounded organelle
GO:0032153, portable, cell division site
GO:0005829, portable, cytosol
GO:0051286, portable, cell tip
GO:0044297, portable, cell body
GO:0031981, portable, nuclear lumen
GO:0005768, portable, endosome
GO:0016578, portable, histone deubiquitination
GO:0010468, portable, regulation of gene expression
1g001300m confident GO:0005829, confident, cytosol
GO:0009506, confident, plasmodesma
GO:0004843, confident, ubiquitin-specific protease activity
GO:0005634, confident, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0006007, portable, glucose catabolic process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009630, portable, gravitropism
GO:0016579, portable, protein deubiquitination
GO:0005794, portable, Golgi apparatus
GO:0033554, portable, cellular response to stress
GO:0005515, portable, protein binding
GO:0006897, portable, endocytosis
1g001242m confident GO:0005829, confident, cytosol
GO:0009506, confident, plasmodesma
GO:0004843, confident, ubiquitin-specific protease activity
GO:0005634, confident, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0006007, portable, glucose catabolic process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009630, portable, gravitropism
GO:0016579, portable, protein deubiquitination
GO:0005794, portable, Golgi apparatus
GO:0033554, portable, cellular response to stress
GO:0005515, portable, protein binding
GO:0006897, portable, endocytosis
1g025024m portable GO:0005634, confident, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0032228, portable, regulation of synaptic transmission, GABAergic
GO:0006499, portable, N-terminal protein myristoylation
GO:0009755, portable, hormone-mediated signaling pathway
GO:0006007, portable, glucose catabolic process
GO:0044297, portable, cell body
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0001662, portable, behavioral fear response
GO:0005768, portable, endosome
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0005515, portable, protein binding
1g042625m portable GO:0005682, confident, U5 snRNP
GO:0071011, confident, precatalytic spliceosome
GO:0071013, confident, catalytic step 2 spliceosome
GO:0009506, confident, plasmodesma
GO:0002119, confident, nematode larval development
GO:0040007, confident, growth
GO:0018996, confident, molting cycle, collagen and cuticulin-based cuticle
GO:0016477, confident, cell migration
GO:0009792, confident, embryo development ending in birth or egg hatching
GO:0008406, confident, gonad development
GO:0030623, confident, U5 snRNA binding
GO:0006898, confident, receptor-mediated endocytosis
GO:0022008, confident, neurogenesis
GO:0040035, confident, hermaphrodite genitalia development
GO:0005515, confident, protein binding
GO:0046540, confident, U4/U6 x U5 tri-snRNP complex
GO:0016607, portable, nuclear speck
GO:0007131, portable, reciprocal meiotic recombination
GO:0010332, portable, response to gamma radiation
GO:0000386, portable, second spliceosomal transesterification activity
GO:0044351, portable, macropinocytosis
GO:0016539, portable, intein-mediated protein splicing
GO:0032204, portable, regulation of telomere maintenance
GO:0007129, portable, synapsis
GO:0043247, portable, telomere maintenance in response to DNA damage
GO:0007062, portable, sister chromatid cohesion
GO:0042138, portable, meiotic DNA double-strand break formation
GO:0045132, portable, meiotic chromosome segregation
GO:0000389, portable, mRNA 3'-splice site recognition
GO:0000350, portable, generation of catalytic spliceosome for second transesterification step
GO:0004843, portable, ubiquitin-specific protease activity
GO:0032504, portable, multicellular organism reproduction
GO:0000244, portable, assembly of spliceosomal tri-snRNP
1g024851m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0004843, portable, ubiquitin-specific protease activity
GO:0032228, portable, regulation of synaptic transmission, GABAergic
GO:0006499, portable, N-terminal protein myristoylation
GO:0043232, portable, intracellular non-membrane-bounded organelle
GO:0032153, portable, cell division site
GO:0005829, portable, cytosol
GO:0051286, portable, cell tip
GO:0009755, portable, hormone-mediated signaling pathway
GO:0006007, portable, glucose catabolic process
GO:0044297, portable, cell body
GO:0031981, portable, nuclear lumen
GO:0001662, portable, behavioral fear response
GO:0005768, portable, endosome
GO:0016578, portable, histone deubiquitination
GO:0010468, portable, regulation of gene expression
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0005515, portable, protein binding
1g022771m portable GO:0005737, portable, cytoplasm
GO:0005886, portable, plasma membrane
GO:1901315, portable, negative regulation of histone H2A K63-linked ubiquitination
GO:0071108, portable, protein K48-linked deubiquitination
GO:0043130, portable, ubiquitin binding
GO:0019784, portable, NEDD8-specific protease activity
GO:0008242, portable, omega peptidase activity
GO:0004843, portable, ubiquitin-specific protease activity
GO:0070536, portable, protein K63-linked deubiquitination
GO:0006520, portable, cellular amino acid metabolic process
GO:0006281, portable, DNA repair
GO:0031625, portable, ubiquitin protein ligase binding
GO:2000780, portable, negative regulation of double-strand break repair
GO:0006508, portable, proteolysis
1g024898m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0004843, portable, ubiquitin-specific protease activity
GO:0032228, portable, regulation of synaptic transmission, GABAergic
GO:0006499, portable, N-terminal protein myristoylation
GO:0043232, portable, intracellular non-membrane-bounded organelle
GO:0032153, portable, cell division site
GO:0005829, portable, cytosol
GO:0051286, portable, cell tip
GO:0009755, portable, hormone-mediated signaling pathway
GO:0006007, portable, glucose catabolic process
GO:0044297, portable, cell body
GO:0031981, portable, nuclear lumen
GO:0001662, portable, behavioral fear response
GO:0005768, portable, endosome
GO:0016578, portable, histone deubiquitination
GO:0010468, portable, regulation of gene expression
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0005515, portable, protein binding
1g022748m portable GO:0005737, portable, cytoplasm
GO:0005886, portable, plasma membrane
GO:1901315, portable, negative regulation of histone H2A K63-linked ubiquitination
GO:0071108, portable, protein K48-linked deubiquitination
GO:0043130, portable, ubiquitin binding
GO:0019784, portable, NEDD8-specific protease activity
GO:0008242, portable, omega peptidase activity
GO:0004843, portable, ubiquitin-specific protease activity
GO:0070536, portable, protein K63-linked deubiquitination
GO:0006520, portable, cellular amino acid metabolic process
GO:0006281, portable, DNA repair
GO:0031625, portable, ubiquitin protein ligase binding
GO:2000780, portable, negative regulation of double-strand break repair
GO:0006508, portable, proteolysis
1g030121m portable GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0021551, portable, central nervous system morphogenesis
GO:0008242, portable, omega peptidase activity
1g017509m portable GO:0004843, portable, ubiquitin-specific protease activity
GO:0000278, portable, mitotic cell cycle
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005829, portable, cytosol
GO:0031647, portable, regulation of protein stability
GO:0042393, portable, histone binding
GO:0006281, portable, DNA repair
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0031323, portable, regulation of cellular metabolic process
GO:0005768, portable, endosome
GO:0016578, portable, histone deubiquitination
GO:0000790, portable, nuclear chromatin
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0044425, portable, membrane part
1g036257m portable GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005730, portable, nucleolus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0023051, portable, regulation of signaling
GO:0044699, portable, single-organism process
GO:0071944, portable, cell periphery
GO:0000124, portable, SAGA complex
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0051239, portable, regulation of multicellular organismal process
GO:0005768, portable, endosome
GO:0019898, portable, extrinsic to membrane
GO:0031090, portable, organelle membrane
GO:0010646, portable, regulation of cell communication
GO:0005515, portable, protein binding
GO:0050896, portable, response to stimulus
1g003426m portable GO:0005829, confident, cytosol
GO:0009506, confident, plasmodesma
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0030133, portable, transport vesicle
GO:0006007, portable, glucose catabolic process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009630, portable, gravitropism
GO:0005515, portable, protein binding
GO:0016579, portable, protein deubiquitination
GO:0005794, portable, Golgi apparatus
1g028455m portable GO:0005829, confident, cytosol
GO:0070536, portable, protein K63-linked deubiquitination
GO:0030968, portable, endoplasmic reticulum unfolded protein response
GO:0071108, portable, protein K48-linked deubiquitination
GO:0046872, portable, metal ion binding
GO:0030433, portable, ER-associated protein catabolic process
GO:0030587, portable, sorocarp development
GO:0004843, portable, ubiquitin-specific protease activity
1g011408m portable GO:0005516, confident, calmodulin binding
GO:0009506, confident, plasmodesma
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0016567, portable, protein ubiquitination
GO:0010388, portable, cullin deneddylation
GO:0016571, portable, histone methylation
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0009640, portable, photomorphogenesis
GO:0005875, portable, microtubule associated complex
GO:0005654, portable, nucleoplasm
GO:0005838, portable, proteasome regulatory particle
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g008789m portable GO:0010485, portable, H4 histone acetyltransferase activity
GO:0016574, portable, histone ubiquitination
GO:0000124, portable, SAGA complex
GO:0016578, portable, histone deubiquitination
GO:0043967, portable, histone H4 acetylation
GO:0045931, portable, positive regulation of mitotic cell cycle
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0031647, portable, regulation of protein stability
GO:0006351, portable, transcription, DNA-dependent
GO:0008270, portable, zinc ion binding
GO:0007049, portable, cell cycle
GO:0045893, portable, positive regulation of transcription, DNA-dependent
GO:0030374, portable, ligand-dependent nuclear receptor transcription coactivator activity
GO:0000790, portable, nuclear chromatin
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0005515, portable, protein binding
GO:0004843, portable, ubiquitin-specific protease activity
1g017219m portable GO:0070536, confident, protein K63-linked deubiquitination
GO:0000338, confident, protein deneddylation
GO:0071108, confident, protein K48-linked deubiquitination
GO:0019941, confident, modification-dependent protein catabolic process
GO:0016926, confident, protein desumoylation
GO:0016021, confident, integral to membrane
GO:0044090, portable, positive regulation of vacuole organization
GO:0046907, portable, intracellular transport
GO:0007033, portable, vacuole organization
GO:0090316, portable, positive regulation of intracellular protein transport
GO:0005515, portable, protein binding
GO:0006897, portable, endocytosis
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0005768, portable, endosome
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g045385m portable GO:0005737, portable, cytoplasm
GO:0010200, portable, response to chitin
GO:0042732, portable, D-xylose metabolic process
GO:0008242, portable, omega peptidase activity
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g003960m portable GO:0031981, portable, nuclear lumen
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g003370m portable GO:0004197, portable, cysteine-type endopeptidase activity
GO:0005634, portable, nucleus
GO:0005737, portable, cytoplasm
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0016579, portable, protein deubiquitination
GO:0000956, portable, nuclear-transcribed mRNA catabolic process
GO:0004843, portable, ubiquitin-specific protease activity
1g005687m portable GO:0031981, portable, nuclear lumen
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g018085m portable GO:2000082, confident, regulation of L-ascorbic acid biosynthetic process
GO:0031347, confident, regulation of defense response
GO:0005730, confident, nucleolus
GO:0008180, confident, signalosome
GO:0045944, confident, positive regulation of transcription from RNA polymerase II promoter
GO:0009733, confident, response to auxin stimulus
GO:0010388, confident, cullin deneddylation
GO:0010387, confident, signalosome assembly
GO:0031672, confident, A band
GO:0010100, confident, negative regulation of photomorphogenesis
GO:0046328, confident, regulation of JNK cascade
GO:0010093, confident, specification of floral organ identity
GO:0045732, confident, positive regulation of protein catabolic process
GO:0010971, confident, positive regulation of G2/M transition of mitotic cell cycle
GO:0008347, portable, glial cell migration
GO:0032435, portable, negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0005852, portable, eukaryotic translation initiation factor 3 complex
GO:0002119, portable, nematode larval development
GO:0016567, portable, protein ubiquitination
GO:0008283, portable, cell proliferation
GO:0005667, portable, transcription factor complex
GO:0050821, portable, protein stabilization
GO:0003743, portable, translation initiation factor activity
GO:0006413, portable, translational initiation
GO:0016571, portable, histone methylation
GO:0017151, portable, DEAD/H-box RNA helicase binding
GO:0008022, portable, protein C-terminus binding
GO:0045116, portable, protein neddylation
GO:0007310, portable, oocyte dorsal/ventral axis specification
GO:0009792, portable, embryo development ending in birth or egg hatching
GO:0030448, portable, hyphal growth
GO:0006366, portable, transcription from RNA polymerase II promoter
GO:0046872, portable, metal ion binding
GO:0003713, portable, transcription coactivator activity
GO:0008406, portable, gonad development
GO:0000910, portable, cytokinesis
GO:0007409, portable, axonogenesis
GO:0007095, portable, mitotic G2 DNA damage checkpoint
GO:0004222, portable, metalloendopeptidase activity
GO:0040035, portable, hermaphrodite genitalia development
GO:0070791, portable, cleistothecium development
GO:0016579, portable, protein deubiquitination
GO:0006508, portable, proteolysis
GO:0019781, portable, NEDD8 activating enzyme activity
GO:0007314, portable, oocyte anterior/posterior axis specification
GO:0010950, portable, positive regulation of endopeptidase activity
GO:0070628, portable, proteasome binding
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005829, portable, cytosol
GO:0005875, portable, microtubule associated complex
GO:0008541, portable, proteasome regulatory particle, lid subcomplex
GO:0044351, portable, macropinocytosis
GO:0048471, portable, perinuclear region of cytoplasm
GO:0034399, portable, nuclear periphery
GO:0006303, portable, double-strand break repair via nonhomologous end joining
GO:0000724, portable, double-strand break repair via homologous recombination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0009640, portable, photomorphogenesis
GO:0045335, portable, phagocytic vesicle
GO:0061133, portable, endopeptidase activator activity
1g003615m portable GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g006181m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g037461m portable GO:0005829, portable, cytosol
GO:0009506, portable, plasmodesma
GO:0005700, portable, polytene chromosome
GO:0050794, portable, regulation of cellular process
GO:0035328, portable, transcriptionally silent chromatin
GO:0016578, portable, histone deubiquitination
GO:0010468, portable, regulation of gene expression
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g028472m portable GO:0005829, confident, cytosol
GO:0070536, portable, protein K63-linked deubiquitination
GO:0030968, portable, endoplasmic reticulum unfolded protein response
GO:0071108, portable, protein K48-linked deubiquitination
GO:0046872, portable, metal ion binding
GO:0030433, portable, ER-associated protein catabolic process
GO:0030587, portable, sorocarp development
GO:0004843, portable, ubiquitin-specific protease activity
1g007094m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g004724m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005576, portable, extracellular region
GO:0008270, portable, zinc ion binding
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0031981, portable, nuclear lumen
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g013776m portable GO:0019222, portable, regulation of metabolic process
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g002757m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0044444, portable, cytoplasmic part
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g020791m portable GO:0005829, confident, cytosol
GO:0009507, portable, chloroplast
GO:0042221, portable, response to chemical stimulus
GO:0005634, portable, nucleus
GO:0031593, portable, polyubiquitin binding
GO:0043161, portable, proteasomal ubiquitin-dependent protein catabolic process
GO:0005102, portable, receptor binding
GO:0034098, portable, Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0032403, portable, protein complex binding
GO:0001501, portable, skeletal system development
GO:0004843, portable, ubiquitin-specific protease activity
1g019666m portable GO:0005829, confident, cytosol
GO:0006606, portable, protein import into nucleus
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g001772m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g002408m portable GO:0004197, portable, cysteine-type endopeptidase activity
GO:0005634, portable, nucleus
GO:0005737, portable, cytoplasm
GO:0030509, portable, BMP signaling pathway
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0031647, portable, regulation of protein stability
GO:0034394, portable, protein localization to cell surface
GO:0005102, portable, receptor binding
GO:0048523, portable, negative regulation of cellular process
GO:0035520, portable, monoubiquitinated protein deubiquitination
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0004843, portable, ubiquitin-specific protease activity
1g006167m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g028610m portable GO:0005829, confident, cytosol
GO:0070536, portable, protein K63-linked deubiquitination
GO:0030968, portable, endoplasmic reticulum unfolded protein response
GO:0071108, portable, protein K48-linked deubiquitination
GO:0046872, portable, metal ion binding
GO:0030433, portable, ER-associated protein catabolic process
GO:0030587, portable, sorocarp development
GO:0004843, portable, ubiquitin-specific protease activity
1g001134m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g018129m portable GO:2000082, confident, regulation of L-ascorbic acid biosynthetic process
GO:0031347, confident, regulation of defense response
GO:0005730, confident, nucleolus
GO:0008180, confident, signalosome
GO:0045944, confident, positive regulation of transcription from RNA polymerase II promoter
GO:0009733, confident, response to auxin stimulus
GO:0010388, confident, cullin deneddylation
GO:0010387, confident, signalosome assembly
GO:0031672, confident, A band
GO:0010100, confident, negative regulation of photomorphogenesis
GO:0046328, confident, regulation of JNK cascade
GO:0010093, confident, specification of floral organ identity
GO:0045732, confident, positive regulation of protein catabolic process
GO:0010971, confident, positive regulation of G2/M transition of mitotic cell cycle
GO:0008347, portable, glial cell migration
GO:0032435, portable, negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0005852, portable, eukaryotic translation initiation factor 3 complex
GO:0002119, portable, nematode larval development
GO:0016567, portable, protein ubiquitination
GO:0008283, portable, cell proliferation
GO:0005667, portable, transcription factor complex
GO:0050821, portable, protein stabilization
GO:0003743, portable, translation initiation factor activity
GO:0006413, portable, translational initiation
GO:0016571, portable, histone methylation
GO:0017151, portable, DEAD/H-box RNA helicase binding
GO:0008022, portable, protein C-terminus binding
GO:0045116, portable, protein neddylation
GO:0007310, portable, oocyte dorsal/ventral axis specification
GO:0009792, portable, embryo development ending in birth or egg hatching
GO:0030448, portable, hyphal growth
GO:0006366, portable, transcription from RNA polymerase II promoter
GO:0046872, portable, metal ion binding
GO:0003713, portable, transcription coactivator activity
GO:0008406, portable, gonad development
GO:0000910, portable, cytokinesis
GO:0007409, portable, axonogenesis
GO:0007095, portable, mitotic G2 DNA damage checkpoint
GO:0004222, portable, metalloendopeptidase activity
GO:0040035, portable, hermaphrodite genitalia development
GO:0070791, portable, cleistothecium development
GO:0016579, portable, protein deubiquitination
GO:0006508, portable, proteolysis
GO:0019781, portable, NEDD8 activating enzyme activity
GO:0007314, portable, oocyte anterior/posterior axis specification
GO:0010950, portable, positive regulation of endopeptidase activity
GO:0070628, portable, proteasome binding
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005829, portable, cytosol
GO:0005875, portable, microtubule associated complex
GO:0008541, portable, proteasome regulatory particle, lid subcomplex
GO:0044351, portable, macropinocytosis
GO:0048471, portable, perinuclear region of cytoplasm
GO:0034399, portable, nuclear periphery
GO:0006303, portable, double-strand break repair via nonhomologous end joining
GO:0000724, portable, double-strand break repair via homologous recombination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0009640, portable, photomorphogenesis
GO:0045335, portable, phagocytic vesicle
GO:0061133, portable, endopeptidase activator activity
1g002773m portable GO:0005737, portable, cytoplasm
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g001770m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g013388m portable GO:0070536, portable, protein K63-linked deubiquitination
GO:0000338, portable, protein deneddylation
GO:0071108, portable, protein K48-linked deubiquitination
GO:0016926, portable, protein desumoylation
GO:0016021, portable, integral to membrane
GO:0006623, portable, protein targeting to vacuole
GO:0032153, portable, cell division site
GO:0030133, portable, transport vesicle
GO:0044090, portable, positive regulation of vacuole organization
GO:0005768, portable, endosome
GO:0007033, portable, vacuole organization
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0090316, portable, positive regulation of intracellular protein transport
GO:0005515, portable, protein binding
GO:0004843, portable, ubiquitin-specific protease activity
GO:0006897, portable, endocytosis
GO:0005634, portable, nucleus
1g020732m portable GO:0005829, confident, cytosol
GO:0006606, portable, protein import into nucleus
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g007395m portable GO:0004197, portable, cysteine-type endopeptidase activity
GO:0044444, portable, cytoplasmic part
GO:0010468, portable, regulation of gene expression
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g013799m portable GO:0019222, portable, regulation of metabolic process
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g003583m portable GO:0005829, confident, cytosol
GO:0048767, confident, root hair elongation
GO:0009793, confident, embryo development ending in seed dormancy
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0008270, portable, zinc ion binding
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0008242, portable, omega peptidase activity
GO:0032436, portable, positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0070536, portable, protein K63-linked deubiquitination
GO:0010506, portable, regulation of autophagy
GO:0008283, portable, cell proliferation
GO:0050821, portable, protein stabilization
GO:0071108, portable, protein K48-linked deubiquitination
GO:0006355, portable, regulation of transcription, DNA-dependent
GO:0031625, portable, ubiquitin protein ligase binding
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0048812, portable, neuron projection morphogenesis
GO:0043130, portable, ubiquitin binding
GO:0004843, portable, ubiquitin-specific protease activity
1g003533m portable GO:0005829, confident, cytosol
GO:0048767, portable, root hair elongation
GO:0009793, portable, embryo development ending in seed dormancy
GO:0032436, portable, positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0070536, portable, protein K63-linked deubiquitination
GO:0010506, portable, regulation of autophagy
GO:0004221, portable, ubiquitin thiolesterase activity
GO:0008283, portable, cell proliferation
GO:0050821, portable, protein stabilization
GO:0071108, portable, protein K48-linked deubiquitination
GO:0006355, portable, regulation of transcription, DNA-dependent
GO:0008270, portable, zinc ion binding
GO:0031625, portable, ubiquitin protein ligase binding
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0048812, portable, neuron projection morphogenesis
GO:0043130, portable, ubiquitin binding
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0008242, portable, omega peptidase activity
GO:0004843, portable, ubiquitin-specific protease activity
1g010812m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0005829, portable, cytosol
GO:0050794, portable, regulation of cellular process
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0019222, portable, regulation of metabolic process
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g019658m portable GO:0005829, confident, cytosol
GO:0006606, portable, protein import into nucleus
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g039539m portable GO:0031981, portable, nuclear lumen
GO:0044444, portable, cytoplasmic part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
1g001479m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g006182m portable GO:0044446, portable, intracellular organelle part
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g002138m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g008741m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0043232, portable, intracellular non-membrane-bounded organelle
GO:0044446, portable, intracellular organelle part
GO:0005829, portable, cytosol
GO:0050794, portable, regulation of cellular process
GO:0005768, portable, endosome
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0019222, portable, regulation of metabolic process
GO:0005515, portable, protein binding
GO:0016579, portable, protein deubiquitination
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus
1g028471m portable GO:0005829, confident, cytosol
GO:0070536, portable, protein K63-linked deubiquitination
GO:0030968, portable, endoplasmic reticulum unfolded protein response
GO:0071108, portable, protein K48-linked deubiquitination
GO:0046872, portable, metal ion binding
GO:0030433, portable, ER-associated protein catabolic process
GO:0030587, portable, sorocarp development
GO:0004843, portable, ubiquitin-specific protease activity
1g002303m portable GO:0004221, portable, ubiquitin thiolesterase activity
GO:0004197, portable, cysteine-type endopeptidase activity
GO:0006511, portable, ubiquitin-dependent protein catabolic process
GO:0004843, portable, ubiquitin-specific protease activity
GO:0005634, portable, nucleus