T0525

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0525

APC41548.0 from unknown species

Target type: Server only

Target sequence:

>T0525 APC41548.0, unknown species, 215 residues
SNAMSVQTIERLQDYLLPEWVSIFDIADFSGRMLRIRGDIRPALLRLASRLAELLNESPGPRPWYPHVASHMRRRVNPPPETWLALGPEKRGYKSYAHSGVFIGGRGLSVRFILKDEAIEERKNLGRWMSRSGPAFEQWKKKVGDLRDFGPVHDDPMADPPKVEWDPRVFGERLGSLKSASLDIGFRVTFDTSLAGIVKTIRTFDLLYAEAEKGS

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: MCSG
PDB ID: 3mqz

Jmol of T0525 structure : 3mqz

PyMOL of T0525

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0525A6-2109-213

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

YktB-like fold. alpha-beta(4)-alpha-beta(2)-alpha-beta-alpha; 2 layers, a/b; antiparallel beta-sheet, order: 1234756; half-barrel shape; topological similarity to the MotA C-terminal domain-like fold (scop_cf 69651) and the Secretion chaperone-like fold (scop_cf 69634).

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

2a8e_A | PyMOL of 2a8e A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Protein of unknown function (DUF1054) (PF06335).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0525 T0525 T0525 T0525
First score First Z-score Best score Best Z-score
1 TS114 65.9760 57.6020 0.8009 0.9035 65.9760 57.6020 0.8009 0.9035 TS114 1
2 TS236 65.6100 57.0730 0.7840 0.8746 66.2200 57.7240 0.8122 0.9102 TS236 2
3 TS380 65.1220 57.2360 0.7615 0.8835 65.1220 57.9270 0.7615 0.9213 TS380 3
4 TS361 65.1220 55.9350 0.7615 0.8124 65.7320 56.7070 0.7896 0.8546 TS361 4
5 TS127 65.1220 55.8540 0.7615 0.8080 65.1220 56.3010 0.7615 0.8324 TS127 5
6 TS215 65.0000 55.7320 0.7559 0.8013 65.0000 56.5040 0.7559 0.8435 TS215 6
7 TS002 65.0000 55.7320 0.7559 0.8013 65.0000 56.5040 0.7559 0.8435 TS002 7
8 TS080 64.7560 55.5690 0.7446 0.7924 65.0000 56.5040 0.7559 0.8435 TS080 8
9 TS119 64.7560 55.5690 0.7446 0.7924 64.8780 55.5690 0.7502 0.7924 TS119 9
10 TS428 64.6340 56.1790 0.7390 0.8258 64.7560 57.6020 0.7446 0.9035 TS428 10
11 TS214 64.6340 52.5200 0.7390 0.6257 65.2440 55.3660 0.7671 0.7813 TS214 11
12 TS104 64.5120 53.7800 0.7333 0.6946 64.5120 53.7800 0.7333 0.6946 TS104 12
13 TS407 64.3900 53.2520 0.7277 0.6657 64.5120 56.3010 0.7333 0.8324 TS407 13
14 TS449 64.2680 56.3010 0.7221 0.8324 64.2680 56.3010 0.7221 0.8324 TS449 14
15 TS453 64.2680 56.3010 0.7221 0.8324 64.2680 56.3010 0.7221 0.8324 TS453 15
16 TS346 64.2680 56.3010 0.7221 0.8324 64.2680 56.3010 0.7221 0.8324 TS346 16
17 TS113 64.2680 55.2440 0.7221 0.7746 64.2680 55.2440 0.7221 0.7746 TS113 17
18 TS026 64.2680 54.6750 0.7221 0.7435 64.2680 54.6750 0.7221 0.7435 TS026 18
19 TS208 64.2680 51.9920 0.7221 0.5969 64.2680 53.6180 0.7221 0.6857 TS208 19
20 TS273 64.0240 54.2680 0.7108 0.7213 64.0240 54.2680 0.7108 0.7213 TS273 20
21 TS037 64.0240 53.7800 0.7108 0.6946 65.0000 57.7640 0.7559 0.9124 TS037 21
22 TS077 64.0240 52.3170 0.7108 0.6146 64.1460 53.0890 0.7164 0.6568 TS077 22
23 TS366 63.9020 55.0410 0.7052 0.7635 63.9020 55.0410 0.7052 0.7635 TS366 23
24 TS228 63.9020 52.9270 0.7052 0.6480 65.2440 53.7400 0.7671 0.6924 TS228 24
25 TS276 63.6590 55.0410 0.6940 0.7635 64.0240 55.0410 0.7108 0.7635 TS276 25
26 TS286 63.6590 55.0410 0.6940 0.7635 64.0240 55.0410 0.7108 0.7635 TS286 26
27 TS056 63.5370 55.8940 0.6883 0.8102 63.5370 55.8940 0.6883 0.8102 TS056 27
28 TS321 63.5370 54.0240 0.6883 0.7079 63.5370 54.0240 0.6883 0.7079 TS321 28
29 TS094 63.4150 53.0080 0.6827 0.6524 63.4150 53.0080 0.6827 0.6524 TS094 29
30 TS452 63.4150 53.0080 0.6827 0.6524 63.4150 53.0080 0.6827 0.6524 TS452 30
31 TS470 63.4150 53.0080 0.6827 0.6524 63.4150 53.0080 0.6827 0.6524 TS470 31
32 TS166 63.2930 53.8620 0.6771 0.6991 63.2930 53.8620 0.6771 0.6991 TS166 32
33 TS435 63.2930 53.3740 0.6771 0.6724 63.2930 53.3740 0.6771 0.6724 TS435 33
34 TS245 63.2930 50.3660 0.6771 0.5080 63.2930 50.3660 0.6771 0.5080 TS245 34
35 TS490 63.0490 53.6180 0.6658 0.6857 64.0240 53.7800 0.7108 0.6946 TS490 35
36 TS291 63.0490 53.4550 0.6658 0.6768 64.1460 53.4550 0.7164 0.6768 TS291 36
37 TS174 63.0490 52.3170 0.6658 0.6146 63.0490 52.3170 0.6658 0.6146 TS174 37
38 TS088 62.9270 51.7070 0.6602 0.5813 64.5120 57.4390 0.7333 0.8946 TS088 38
39 TS457 62.9270 49.0240 0.6602 0.4346 62.9270 52.9270 0.6602 0.6480 TS457 39
40 TS018 62.8050 50.4470 0.6546 0.5124 62.8050 50.4470 0.6546 0.5124 TS018 40
41 TS429 62.6830 53.2520 0.6489 0.6657 63.4150 53.4550 0.6827 0.6768 TS429 41
42 TS409 62.5610 50.4470 0.6433 0.5124 62.5610 50.4470 0.6433 0.5124 TS409 42
43 TS419 62.5610 49.4720 0.6433 0.4591 62.5610 49.4720 0.6433 0.4591 TS419 43
44 TS063 62.4390 52.6020 0.6377 0.6302 63.5370 53.9430 0.6883 0.7035 TS063 44
45 TS102 62.4390 52.2760 0.6377 0.6124 63.1710 54.8780 0.6715 0.7546 TS102 45
46 TS314 62.4390 51.1380 0.6377 0.5502 62.4390 51.1380 0.6377 0.5502 TS314 46
47 TS302 62.3170 53.5370 0.6320 0.6813 62.3170 53.5370 0.6320 0.6813 TS302 47
48 TS142 62.3170 53.5370 0.6320 0.6813 62.3170 53.5370 0.6320 0.6813 TS142 48
49 TS447 62.3170 53.5370 0.6320 0.6813 62.3170 53.5370 0.6320 0.6813 TS447 49
50 TS304 62.1950 52.6830 0.6264 0.6346 62.1950 52.6830 0.6264 0.6346 TS304 50
51 TS307 62.1950 52.6020 0.6264 0.6302 63.0490 53.2520 0.6658 0.6657 TS307 51
52 TS028 62.0730 52.7240 0.6208 0.6369 62.0730 52.7240 0.6208 0.6369 TS028 52
53 TS074 62.0730 52.0730 0.6208 0.6013 62.0730 52.0730 0.6208 0.6013 TS074 53
54 TS319 62.0730 51.4230 0.6208 0.5657 64.0240 54.2680 0.7108 0.7213 TS319 54
55 TS103 61.9510 54.7150 0.6152 0.7457 61.9510 55.1630 0.6152 0.7702 TS103 55
56 TS165 61.8290 53.3740 0.6095 0.6724 64.5120 55.9760 0.7333 0.8147 TS165 56
57 TS476 61.8290 52.3170 0.6095 0.6146 61.8290 52.3170 0.6095 0.6146 TS476 57
58 TS420 61.8290 52.3170 0.6095 0.6146 61.8290 52.3170 0.6095 0.6146 TS420 58
59 TS171 61.8290 52.3170 0.6095 0.6146 61.8290 52.3170 0.6095 0.6146 TS171 59
60 TS471 61.8290 52.3170 0.6095 0.6146 61.8290 52.3170 0.6095 0.6146 TS471 60
61 TS436 61.8290 51.5850 0.6095 0.5746 61.8290 51.5850 0.6095 0.5746 TS436 61
62 TS275 61.8290 51.5040 0.6095 0.5702 63.4150 54.5930 0.6827 0.7390 TS275 62
63 TS213 61.7070 51.0570 0.6039 0.5457 64.2680 55.7320 0.7221 0.8013 TS213 63
64 TS047 61.0980 51.7480 0.5758 0.5835 61.0980 51.7480 0.5758 0.5835 TS047 64
65 TS207 60.9760 49.4310 0.5702 0.4568 60.9760 49.6750 0.5702 0.4702 TS207 65
66 TS001 60.9760 48.6180 0.5702 0.4124 64.0240 54.2680 0.7108 0.7213 TS001 66
67 TS296 60.9760 48.6180 0.5702 0.4124 64.0240 54.2680 0.7108 0.7213 TS296 67
68 TS391 60.6100 52.0730 0.5533 0.6013 60.6100 52.0730 0.5533 0.6013 TS391 68
69 TS129 60.6100 50.6100 0.5533 0.5213 60.6100 50.6100 0.5533 0.5213 TS129 69
70 AL396 60.2440 51.1380 0.5364 0.5502 60.2440 51.1380 0.5364 0.5502 AL396 70
71 TS253 59.7560 50.0810 0.5139 0.4924 62.3170 51.9920 0.6320 0.5969 TS253 71
72 TS117 59.5120 51.2200 0.5026 0.5547 60.4880 52.4390 0.5476 0.6213 TS117 72
73 TS218 57.9270 51.2600 0.4295 0.5568 58.2930 52.1140 0.4464 0.6035 TS218 73
74 TS395 56.7070 49.8780 0.3732 0.4813 58.2930 49.8780 0.4464 0.4813 TS395 74
75 TS244 55.0000 50.9350 0.2944 0.5391 55.0000 50.9350 0.2944 0.5391 TS244 75
76 TS173 54.8780 44.8780 0.2888 0.2079 60.4880 50.4880 0.5476 0.5146 TS173 76
77 TS250 54.1460 43.4960 0.2550 0.1324 55.4880 46.1380 0.3169 0.2768 TS250 77
78 AL285 53.7800 48.3330 0.2381 0.3968 53.7800 48.3330 0.2381 0.3968 AL285 78
79 TS345 48.6590 36.2200 0.0018 -0.2654 63.9020 55.3660 0.7052 0.7813 TS345 79
80 TS170 41.9510 37.5200 -0.3078 -0.1943 63.9020 54.3900 0.7052 0.7280 TS170 80
81 TS350 18.9020 14.4310 -1.3714 -1.4566 18.9020 15.3660 -1.3714 -1.4054 TS350 81
82 TS264 17.5610 15.8940 -1.4332 -1.3766 17.5610 15.8940 -1.4332 -1.3766 TS264 82
83 TS014 14.3900 12.6420 -1.5796 -1.5544 15.9760 14.5120 -1.5064 -1.4521 TS014 83
84 TS257 14.3900 12.1950 -1.5796 -1.5788 17.5610 12.6020 -1.4332 -1.5565 TS257 84
85 TS481 13.4150 11.7480 -1.6246 -1.6032 13.4150 11.7480 -1.6246 -1.6032 TS481 85
86 TS055 13.4150 11.7480 -1.6246 -1.6032 15.1220 12.1950 -1.5458 -1.5788 TS055 86
87 TS355 13.1710 12.6830 -1.6358 -1.5521 19.8780 18.3330 -1.3263 -1.2432 TS355 87
88 RANDOM 12.75 10.60 -1.6553 -1.6660 12.75 10.60 -1.6553 -1.6660 RANDOM 88
89 TS229 10.8540 9.9590 -1.7427 -1.7010 11.9510 11.2200 -1.6921 -1.6321 TS229 89
90 TS289 9.0240 7.1950 -1.8272 -1.8521 9.0240 7.1950 -1.8272 -1.8521 TS289 90
91 TS009             -1.6553 -1.6660             -1.6553 -1.6660 TS009 91
92 TS016             -1.6553 -1.6660             -1.6553 -1.6660 TS016 92
93 TS020             -1.6553 -1.6660             -1.6553 -1.6660 TS020 93
94 TS029             -1.6553 -1.6660             -1.6553 -1.6660 TS029 94
95 TS033             -1.6553 -1.6660             -1.6553 -1.6660 TS033 95
96 TS035             -1.6553 -1.6660             -1.6553 -1.6660 TS035 96
97 TS039             -1.6553 -1.6660             -1.6553 -1.6660 TS039 97
98 TS042             -1.6553 -1.6660             -1.6553 -1.6660 TS042 98
99 TS044             -1.6553 -1.6660             -1.6553 -1.6660 TS044 99
100 TS045             -1.6553 -1.6660             -1.6553 -1.6660 TS045 100
101 TS060             -1.6553 -1.6660             -1.6553 -1.6660 TS060 101
102 TS061             -1.6553 -1.6660             -1.6553 -1.6660 TS061 102
103 TS075             -1.6553 -1.6660             -1.6553 -1.6660 TS075 103
104 TS083             -1.6553 -1.6660             -1.6553 -1.6660 TS083 104
105 TS084             -1.6553 -1.6660             -1.6553 -1.6660 TS084 105
106 TS086             -1.6553 -1.6660             -1.6553 -1.6660 TS086 106
107 TS096             -1.6553 -1.6660             -1.6553 -1.6660 TS096 107
108 TS105             -1.6553 -1.6660             -1.6553 -1.6660 TS105 108
109 TS110             -1.6553 -1.6660             -1.6553 -1.6660 TS110 109
110 TS140             -1.6553 -1.6660             -1.6553 -1.6660 TS140 110
111 TS147             -1.6553 -1.6660             -1.6553 -1.6660 TS147 111
112 TS149             -1.6553 -1.6660             -1.6553 -1.6660 TS149 112
113 TS150             -1.6553 -1.6660             -1.6553 -1.6660 TS150 113
114 TS152             -1.6553 -1.6660             -1.6553 -1.6660 TS152 114
115 TS153             -1.6553 -1.6660             -1.6553 -1.6660 TS153 115
116 TS154             -1.6553 -1.6660             -1.6553 -1.6660 TS154 116
117 TS160             -1.6553 -1.6660             -1.6553 -1.6660 TS160 117
118 TS172             -1.6553 -1.6660             -1.6553 -1.6660 TS172 118
119 TS178             -1.6553 -1.6660             -1.6553 -1.6660 TS178 119
120 TS180             -1.6553 -1.6660             -1.6553 -1.6660 TS180 120
121 TS182             -1.6553 -1.6660             -1.6553 -1.6660 TS182 121
122 TS184             -1.6553 -1.6660             -1.6553 -1.6660 TS184 122
123 TS186             -1.6553 -1.6660             -1.6553 -1.6660 TS186 123
124 TS189             -1.6553 -1.6660             -1.6553 -1.6660 TS189 124
125 TS192             -1.6553 -1.6660             -1.6553 -1.6660 TS192 125
126 TS199             -1.6553 -1.6660             -1.6553 -1.6660 TS199 126
127 TS200             -1.6553 -1.6660             -1.6553 -1.6660 TS200 127
128 TS206             -1.6553 -1.6660             -1.6553 -1.6660 TS206 128
129 TS220             -1.6553 -1.6660             -1.6553 -1.6660 TS220 129
130 TS240             -1.6553 -1.6660             -1.6553 -1.6660 TS240 130
131 TS242             -1.6553 -1.6660             -1.6553 -1.6660 TS242 131
132 TS248             -1.6553 -1.6660             -1.6553 -1.6660 TS248 132
133 TS254             -1.6553 -1.6660             -1.6553 -1.6660 TS254 133
134 TS261             -1.6553 -1.6660             -1.6553 -1.6660 TS261 134
135 TS263             -1.6553 -1.6660             -1.6553 -1.6660 TS263 135
136 TS269             -1.6553 -1.6660             -1.6553 -1.6660 TS269 136
137 TS278             -1.6553 -1.6660             -1.6553 -1.6660 TS278 137
138 TS279             -1.6553 -1.6660             -1.6553 -1.6660 TS279 138
139 TS282             -1.6553 -1.6660             -1.6553 -1.6660 TS282 139
140 TS295             -1.6553 -1.6660             -1.6553 -1.6660 TS295 140
141 TS297             -1.6553 -1.6660             -1.6553 -1.6660 TS297 141
142 TS299             -1.6553 -1.6660             -1.6553 -1.6660 TS299 142
143 TS300             -1.6553 -1.6660             -1.6553 -1.6660 TS300 143
144 TS301             -1.6553 -1.6660             -1.6553 -1.6660 TS301 144
145 TS311             -1.6553 -1.6660             -1.6553 -1.6660 TS311 145
146 TS316             -1.6553 -1.6660             -1.6553 -1.6660 TS316 146
147 TS322             -1.6553 -1.6660             -1.6553 -1.6660 TS322 147
148 TS324             -1.6553 -1.6660             -1.6553 -1.6660 TS324 148
149 TS328             -1.6553 -1.6660             -1.6553 -1.6660 TS328 149
150 TS330             -1.6553 -1.6660             -1.6553 -1.6660 TS330 150
151 TS331             -1.6553 -1.6660             -1.6553 -1.6660 TS331 151
152 TS333             -1.6553 -1.6660             -1.6553 -1.6660 TS333 152
153 TS336             -1.6553 -1.6660             -1.6553 -1.6660 TS336 153
154 TS347             -1.6553 -1.6660             -1.6553 -1.6660 TS347 154
155 TS353             -1.6553 -1.6660             -1.6553 -1.6660 TS353 155
156 TS358             -1.6553 -1.6660             -1.6553 -1.6660 TS358 156
157 TS360             -1.6553 -1.6660             -1.6553 -1.6660 TS360 157
158 TS362             -1.6553 -1.6660             -1.6553 -1.6660 TS362 158
159 TS365             -1.6553 -1.6660             -1.6553 -1.6660 TS365 159
160 TS373             -1.6553 -1.6660             -1.6553 -1.6660 TS373 160
161 TS382             -1.6553 -1.6660             -1.6553 -1.6660 TS382 161
162 TS386             -1.6553 -1.6660             -1.6553 -1.6660 TS386 162
163 TS399             -1.6553 -1.6660             -1.6553 -1.6660 TS399 163
164 TS400             -1.6553 -1.6660             -1.6553 -1.6660 TS400 164
165 TS402             -1.6553 -1.6660             -1.6553 -1.6660 TS402 165
166 TS403             -1.6553 -1.6660             -1.6553 -1.6660 TS403 166
167 TS408             -1.6553 -1.6660             -1.6553 -1.6660 TS408 167
168 TS418             -1.6553 -1.6660             -1.6553 -1.6660 TS418 168
169 TS423             -1.6553 -1.6660             -1.6553 -1.6660 TS423 169
170 TS424             -1.6553 -1.6660             -1.6553 -1.6660 TS424 170
171 TS433             -1.6553 -1.6660             -1.6553 -1.6660 TS433 171
172 TS439             -1.6553 -1.6660             -1.6553 -1.6660 TS439 172
173 TS444             -1.6553 -1.6660             -1.6553 -1.6660 TS444 173
174 TS450             -1.6553 -1.6660             -1.6553 -1.6660 TS450 174
175 TS458             -1.6553 -1.6660             -1.6553 -1.6660 TS458 175
176 TS461             -1.6553 -1.6660             -1.6553 -1.6660 TS461 176
177 TS477             -1.6553 -1.6660             -1.6553 -1.6660 TS477 177
178 TS484             -1.6553 -1.6660             -1.6553 -1.6660 TS484 178