T0624

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0624

RUMGNA_01417 from Ruminococcus gnavus

Target type: Human/Server

Target sequence:

>T0624 RUMGNA_01417, Ruminococcus gnavus, 81 residues
MSEHREGTLFYDTETGRYDIRFDLESFYGGLHCGECFDVKVKDVWVPVRIEMGDDWYLVGLNVSRLDGLRVRMLEHHHHHH

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: NESG
PDB ID: 3nrl

Jmol of T0624 structure : 3nrl

PyMOL of T0624

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0624A5-735-73
T0624B5-735-73

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Hard target

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: FM  alignment.

Closest templates:

Template manually selected by shuoyong:

No good template found for now, needs more study

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

needs more analysis

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0624 T0624 T0624 T0624
First score First Z-score Best score Best Z-score
1 TS172 56.1590 47.4640 3.1065 2.6609 56.1590 48.0680 3.1065 2.7425 TS172 1
2 TS016 46.3770 43.9610 1.8606 2.1875 46.3770 44.2030 1.8606 2.2202 TS016 2
3 TS096 46.3770 38.4060 1.8606 1.4368 46.3770 39.0100 1.8606 1.5184 TS096 3
4 TS240 46.0140 43.8410 1.8144 2.1713 46.0140 43.8410 1.8144 2.1713 TS240 4
5 TS428 46.0140 43.8410 1.8144 2.1713 46.0140 43.8410 1.8144 2.1713 TS428 5
6 TS408 46.0140 42.3910 1.8144 1.9753 46.0140 42.3910 1.8144 1.9753 TS408 6
7 TS450 46.0140 38.2850 1.8144 1.4204 46.0140 38.2850 1.8144 1.4204 TS450 7
8 TS345 46.0140 36.1110 1.8144 1.1266 46.0140 38.7680 1.8144 1.4857 TS345 8
9 TS402 44.9280 37.1980 1.6761 1.2735 45.6520 40.9420 1.7683 1.7795 TS402 9
10 TS380 44.5650 43.1160 1.6299 2.0733 44.5650 43.1160 1.6299 2.0733 TS380 10
11 TS429 43.8410 38.2850 1.5377 1.4204 43.8410 38.4060 1.5377 1.4368 TS429 11
12 TS094 43.4780 40.4590 1.4914 1.7142 46.0140 43.8410 1.8144 2.1713 TS094 12
13 TS407 43.4780 40.4590 1.4914 1.7142 46.0140 43.8410 1.8144 2.1713 TS407 13
14 TS419 43.4780 40.0970 1.4914 1.6653 46.0140 43.8410 1.8144 2.1713 TS419 14
15 TS166 43.4780 40.0970 1.4914 1.6653 43.4780 40.0970 1.4914 1.6653 TS166 15
16 TS113 43.1160 41.9080 1.4453 1.9100 45.2900 43.1160 1.7222 2.0733 TS113 16
17 TS060 43.1160 37.5600 1.4453 1.3224 46.0140 43.8410 1.8144 2.1713 TS060 17
18 TS316 42.7540 38.6470 1.3992 1.4693 48.9130 45.0480 2.1836 2.3344 TS316 18
19 TS399 42.0290 38.6470 1.3069 1.4693 43.4780 42.0290 1.4914 1.9264 TS399 19
20 TS457 41.3040 37.9230 1.2145 1.3715 41.3040 38.1640 1.2145 1.4041 TS457 20
21 TS400 41.3040 34.7830 1.2145 0.9471 43.1160 38.6470 1.4453 1.4693 TS400 21
22 TS321 40.9420 34.1790 1.1684 0.8655 44.9280 39.8550 1.6761 1.6326 TS321 22
23 TS080 40.5800 33.3330 1.1223 0.7512 40.5800 36.4730 1.1223 1.1755 TS080 23
24 TS153 40.2170 32.7290 1.0761 0.6695 40.2170 32.7290 1.0761 0.6695 TS153 24
25 TS002 39.8550 36.4730 1.0300 1.1755 40.5800 36.4730 1.1223 1.1755 TS002 25
26 TS386 39.8550 35.6280 1.0300 1.0613 40.2170 36.5940 1.0761 1.1919 TS386 26
27 TS061 39.8550 34.3000 1.0300 0.8819 40.5800 34.3000 1.1223 0.8819 TS061 27
28 TS365 39.4930 36.3530 0.9839 1.1593 39.4930 36.3530 0.9839 1.1593 TS365 28
29 TS103 39.4930 35.8700 0.9839 1.0940 39.4930 35.8700 0.9839 1.0940 TS103 29
30 TS361 39.4930 34.9030 0.9839 0.9634 40.2170 34.9030 1.0761 0.9634 TS361 30
31 TS382 39.1300 36.7150 0.9377 1.2082 43.8410 39.2510 1.5377 1.5510 TS382 31
32 TS470 39.1300 35.5070 0.9377 1.0450 39.1300 35.9900 0.9377 1.1103 TS470 32
33 TS033 39.1300 35.5070 0.9377 1.0450 41.3040 38.1640 1.2145 1.4041 TS033 33
34 TS037 39.1300 33.8160 0.9377 0.8165 44.2030 38.4060 1.5838 1.4368 TS037 34
35 TS215 39.1300 33.0920 0.9377 0.7186 43.1160 36.4730 1.4453 1.1755 TS215 35
36 TS110 39.1300 33.0920 0.9377 0.7186 44.5650 43.1160 1.6299 2.0733 TS110 36
37 TS119 39.1300 32.7290 0.9377 0.6695 42.7540 37.4400 1.3992 1.3062 TS119 37
38 TS490 39.1300 32.2460 0.9377 0.6043 40.2170 35.7490 1.0761 1.0777 TS490 38
39 TS236 39.1300 30.3140 0.9377 0.3432 40.2170 31.5220 1.0761 0.5064 TS236 39
40 TS395 38.7680 37.0770 0.8916 1.2572 40.9420 37.0770 1.1684 1.2572 TS395 40
41 TS044 38.7680 35.8700 0.8916 1.0940 38.7680 35.8700 0.8916 1.0940 TS044 41
42 TS484 38.7680 34.6620 0.8916 0.9308 44.5650 34.6620 1.6299 0.9308 TS484 42
43 TS253 38.4060 35.9900 0.8454 1.1103 40.5800 37.1980 1.1223 1.2735 TS253 43
44 TS213 38.4060 35.5070 0.8454 1.0450 38.4060 35.5070 0.8454 1.0450 TS213 44
45 TS391 38.4060 31.1590 0.8454 0.4574 38.4060 31.1590 0.8454 0.4574 TS391 45
46 TS307 38.0430 36.3530 0.7992 1.1593 38.0430 36.3530 0.7992 1.1593 TS307 46
47 TS300 38.0430 34.0580 0.7992 0.8492 40.9420 37.9230 1.1684 1.3715 TS300 47
48 TS199 38.0430 33.2130 0.7992 0.7350 38.0430 33.2130 0.7992 0.7350 TS199 48
49 TS026 37.6810 30.6760 0.7531 0.3921 37.6810 30.6760 0.7531 0.3921 TS026 49
50 TS055 37.3190 33.9370 0.7070 0.8328 39.1300 35.5070 0.9377 1.0450 TS055 50
51 TS324 37.3190 32.1260 0.7070 0.5881 37.3190 32.1260 0.7070 0.5881 TS324 51
52 TS481 36.9570 34.6620 0.6609 0.9308 39.1300 36.2320 0.9377 1.1430 TS481 52
53 TS114 36.9570 31.1590 0.6609 0.4574 39.4930 34.9030 0.9839 0.9634 TS114 53
54 TS297 36.9570 30.9180 0.6609 0.4248 43.4780 42.5120 1.4914 1.9917 TS297 54
55 TS366 36.2320 32.8500 0.5686 0.6859 36.2320 32.8500 0.5686 0.6859 TS366 55
56 TS063 36.2320 32.8500 0.5686 0.6859 36.2320 32.8500 0.5686 0.6859 TS063 56
57 TS028 36.2320 31.8840 0.5686 0.5554 40.2170 34.6620 1.0761 0.9308 TS028 57
58 TS302 36.2320 31.8840 0.5686 0.5554 40.2170 34.6620 1.0761 0.9308 TS302 58
59 TS142 36.2320 31.8840 0.5686 0.5554 40.2170 34.6620 1.0761 0.9308 TS142 59
60 TS035 36.2320 31.1590 0.5686 0.4574 36.2320 31.1590 0.5686 0.4574 TS035 60
61 TS452 35.1450 27.6570 0.4301 -0.0159 35.1450 29.2270 0.4301 0.1963 TS452 61
62 TS077 34.4200 29.5890 0.3378 0.2452 52.8990 43.1160 2.6913 2.0733 TS077 62
63 TS424 34.4200 27.4150 0.3378 -0.0486 40.9420 37.0770 1.1684 1.2572 TS424 63
64 TS170 34.0580 30.3140 0.2917 0.3432 44.2030 38.8890 1.5838 1.5020 TS170 64
65 TS218 33.6960 30.7970 0.2456 0.4084 34.4200 32.7290 0.3378 0.6695 TS218 65
66 TS042 33.3330 29.9520 0.1993 0.2942 42.3910 37.1980 1.3530 1.2735 TS042 66
67 TS276 33.3330 26.5700 0.1993 -0.1628 51.0870 46.4980 2.4605 2.5304 TS276 67
68 TS286 33.3330 26.5700 0.1993 -0.1628 51.0870 46.4980 2.4605 2.5304 TS286 68
69 TS165 32.9710 27.8990 0.1532 0.0168 32.9710 27.8990 0.1532 0.0168 TS165 69
70 TS295 32.9710 26.2080 0.1532 -0.2117 41.6670 36.8360 1.2608 1.2246 TS295 70
71 TS353 32.2460 30.5560 0.0609 0.3759 40.2170 38.0430 1.0761 1.3877 TS353 71
72 TS355 31.8840 30.1930 0.0148 0.3268 33.6960 30.1930 0.2456 0.3268 TS355 72
73 TS200 31.5220 24.0340 -0.0313 -0.5055 32.2460 28.6230 0.0609 0.1146 TS200 73
74 TS418 31.1590 28.7440 -0.0775 0.1310 39.1300 35.5070 0.9377 1.0450 TS418 74
75 TS147 30.7970 26.6910 -0.1236 -0.1465 34.4200 29.7100 0.3378 0.2615 TS147 75
76 TS075 30.7970 25.7250 -0.1236 -0.2770 36.2320 31.6430 0.5686 0.5228 TS075 76
77 TS458 30.4350 24.8790 -0.1697 -0.3913 38.0430 35.3860 0.7992 1.0286 TS458 77
78 TS299 30.4350 23.4300 -0.1697 -0.5872 31.5220 25.8450 -0.0313 -0.2608 TS299 78
79 TS104 30.0720 26.4490 -0.2160 -0.1792 44.9280 41.5460 1.6761 1.8611 TS104 79
80 TS047 29.3480 26.4490 -0.3082 -0.1792 29.3480 26.4490 -0.3082 -0.1792 TS047 80
81 TS476 28.9860 25.0000 -0.3543 -0.3750 28.9860 25.0000 -0.3543 -0.3750 TS476 81
82 TS171 28.9860 25.0000 -0.3543 -0.3750 28.9860 25.0000 -0.3543 -0.3750 TS171 82
83 TS319 28.9860 24.6380 -0.3543 -0.4239 29.7100 26.5700 -0.2621 -0.1628 TS319 83
84 TS291 28.9860 24.1550 -0.3543 -0.4892 34.7830 27.6570 0.3840 -0.0159 TS291 84
85 TS102 28.9860 23.4300 -0.3543 -0.5872 29.7100 23.4300 -0.2621 -0.5872 TS102 85
86 TS160 28.6230 25.6040 -0.4005 -0.2934 30.7970 26.8120 -0.1236 -0.1301 TS160 86
87 TS244 28.2610 24.8790 -0.4466 -0.3913 40.5800 34.0580 1.1223 0.8492 TS244 87
88 TS409 28.2610 22.7050 -0.4466 -0.6851 28.2610 23.0680 -0.4466 -0.6361 TS409 88
89 TS304 28.2610 22.7050 -0.4466 -0.6851 30.0720 26.6910 -0.2160 -0.1465 TS304 89
90 TS084 27.8990 24.1550 -0.4927 -0.4892 31.1590 28.0190 -0.0775 0.0330 TS084 90
91 TS373 27.8990 23.7920 -0.4927 -0.5382 31.1590 29.4690 -0.0775 0.2290 TS373 91
92 TS403 27.5360 25.0000 -0.5390 -0.3750 27.5360 25.2420 -0.5390 -0.3423 TS403 92
93 TS350 27.1740 23.0680 -0.5851 -0.6361 35.5070 30.6760 0.4762 0.3921 TS350 93
94 TS208 27.1740 22.9470 -0.5851 -0.6524 27.1740 25.2420 -0.5851 -0.3423 TS208 94
95 TS333 26.8120 25.3620 -0.6312 -0.3261 26.8120 25.3620 -0.6312 -0.3261 TS333 95
96 TS029 26.8120 23.9130 -0.6312 -0.5219 26.8120 23.9130 -0.6312 -0.5219 TS029 96
97 TS269 26.8120 22.9470 -0.6312 -0.6524 28.2610 23.9130 -0.4466 -0.5219 TS269 97
98 TS039 26.8120 22.9470 -0.6312 -0.6524 27.1740 23.9130 -0.5851 -0.5219 TS039 98
99 TS086 26.8120 22.9470 -0.6312 -0.6524 31.1590 28.0190 -0.0775 0.0330 TS086 99
100 TS152 26.8120 22.9470 -0.6312 -0.6524 28.2610 23.9130 -0.4466 -0.5219 TS152 100
101 TS088 26.8120 22.3430 -0.6312 -0.7341 27.5360 25.1210 -0.5390 -0.3586 TS088 101
102 TS301 26.4490 22.9470 -0.6774 -0.6524 28.2610 26.8120 -0.4466 -0.1301 TS301 102
103 AL396 26.4490 21.8600 -0.6774 -0.7993 31.5220 25.0000 -0.0313 -0.3750 AL396 103
104 TS278 26.4490 20.4110 -0.6774 -0.9952 26.4490 20.4110 -0.6774 -0.9952 TS278 104
105 TS275 26.0870 23.4300 -0.7235 -0.5872 29.7100 26.5700 -0.2621 -0.1628 TS275 105
106 TS273 26.0870 23.4300 -0.7235 -0.5872 27.5360 25.7250 -0.5390 -0.2770 TS273 106
107 TS001 26.0870 23.4300 -0.7235 -0.5872 31.8840 25.7250 0.0148 -0.2770 TS001 107
108 TS296 26.0870 23.4300 -0.7235 -0.5872 27.5360 25.7250 -0.5390 -0.2770 TS296 108
109 TS220 26.0870 21.9810 -0.7235 -0.7830 39.4930 35.6280 0.9839 1.0613 TS220 109
110 TS447 26.0870 21.9810 -0.7235 -0.7830 39.4930 35.6280 0.9839 1.0613 TS447 110
111 TS173 25.7250 22.5850 -0.7696 -0.7014 27.1740 23.4300 -0.5851 -0.5872 TS173 111
112 TS331 25.7250 22.3430 -0.7696 -0.7341 25.7250 22.3430 -0.7696 -0.7341 TS331 112
113 TS229 25.7250 22.3430 -0.7696 -0.7341 25.7250 22.3430 -0.7696 -0.7341 TS229 113
114 TS444 25.7250 21.6180 -0.7696 -0.8321 25.7250 21.6180 -0.7696 -0.8321 TS444 114
115 TS127 25.3620 22.4640 -0.8159 -0.7177 25.7250 23.0680 -0.7696 -0.6361 TS127 115
116 TS242 25.0000 23.7920 -0.8620 -0.5382 25.3620 23.9130 -0.8159 -0.5219 TS242 116
117 TS083 25.0000 23.3090 -0.8620 -0.6035 34.7830 34.0580 0.3840 0.8492 TS083 117
118 TS257 25.0000 22.5850 -0.8620 -0.7014 28.9860 23.9130 -0.3543 -0.5219 TS257 118
119 TS423 25.0000 21.6180 -0.8620 -0.8321 25.0000 21.6180 -0.8620 -0.8321 TS423 119
120 TS149 25.0000 21.3770 -0.8620 -0.8646 25.0000 21.3770 -0.8620 -0.8646 TS149 120
121 TS056 25.0000 19.5650 -0.8620 -1.1095 28.9860 24.6380 -0.3543 -0.4239 TS056 121
122 TS174 24.6380 23.3090 -0.9081 -0.6035 38.0430 29.5890 0.7992 0.2452 TS174 122
123 TS477 24.6380 22.5850 -0.9081 -0.7014 29.7100 27.2950 -0.2621 -0.0648 TS477 123
124 TS206 24.2750 20.7730 -0.9543 -0.9462 24.2750 20.7730 -0.9543 -0.9462 TS206 124
125 TS360 24.2750 19.4440 -0.9543 -1.1259 42.0290 39.8550 1.3069 1.6326 TS360 125
126 RANDOM 23.67 20.46 -1.0313 -0.9885 23.67 20.46 -1.0313 -0.9885 RANDOM 126
127 TS322 23.5510 20.4110 -1.0465 -0.9952 26.4490 23.3090 -0.6774 -0.6035 TS322 127
128 TS461 23.5510 19.9280 -1.0465 -1.0604 25.7250 22.8260 -0.7696 -0.6688 TS461 128
129 TS250 23.5510 19.4440 -1.0465 -1.1259 23.5510 21.3770 -1.0465 -0.8646 TS250 129
130 TS014 23.1880 17.6330 -1.0927 -1.3706 26.4490 23.3090 -0.6774 -0.6035 TS014 130
131 TS020 22.8260 20.1690 -1.1388 -1.0279 28.2610 25.7250 -0.4466 -0.2770 TS020 131
132 TS207 22.8260 19.6860 -1.1388 -1.0932 24.2750 21.1350 -0.9543 -0.8973 TS207 132
133 TS186 22.8260 18.4780 -1.1388 -1.2564 30.7970 25.6040 -0.1236 -0.2934 TS186 133
134 TS214 22.8260 18.2370 -1.1388 -1.2890 25.0000 22.4640 -0.8620 -0.7177 TS214 134
135 TS192 22.8260 18.2370 -1.1388 -1.2890 22.8260 18.2370 -1.1388 -1.2890 TS192 135
136 TS182 22.8260 17.5120 -1.1388 -1.3870 26.0870 20.7730 -0.7235 -0.9462 TS182 136
137 TS129 22.4640 18.8410 -1.1849 -1.2073 25.3620 18.9610 -0.8159 -1.1911 TS129 137
138 TS248 22.4640 17.3910 -1.1849 -1.4033 24.6380 20.0480 -0.9081 -1.0442 TS248 138
139 TS117 21.7390 17.1500 -1.2773 -1.4359 29.3480 26.9320 -0.3082 -0.1139 TS117 139
140 TS449 21.3770 19.4440 -1.3234 -1.1259 21.3770 19.4440 -1.3234 -1.1259 TS449 140
141 TS453 21.3770 19.4440 -1.3234 -1.1259 21.3770 19.4440 -1.3234 -1.1259 TS453 141
142 TS346 21.3770 19.4440 -1.3234 -1.1259 21.3770 19.4440 -1.3234 -1.1259 TS346 142
143 TS264 21.3770 19.4440 -1.3234 -1.1259 35.1450 30.0720 0.4301 0.3105 TS264 143
144 TS328 21.3770 14.8550 -1.3234 -1.7460 21.3770 14.8550 -1.3234 -1.7460 TS328 144
145 TS435 21.0140 17.6330 -1.3696 -1.3706 36.5940 30.5560 0.6147 0.3759 TS435 145
146 TS420 19.9280 17.7540 -1.5079 -1.3543 19.9280 17.7540 -1.5079 -1.3543 TS420 146
147 TS471 19.9280 17.7540 -1.5079 -1.3543 19.9280 17.7540 -1.5079 -1.3543 TS471 147
148 TS336 19.2030 16.0630 -1.6003 -1.5828 24.6380 22.5850 -0.9081 -0.7014 TS336 148
149 TS045 18.8410 17.5120 -1.6464 -1.3870 18.8410 17.7540 -1.6464 -1.3543 TS045 149
150 TS433 18.4780 15.3380 -1.6926 -1.6808 25.7250 22.3430 -0.7696 -0.7341 TS433 150
151 TS018 18.1160 15.4590 -1.7387 -1.6644 19.9280 16.7870 -1.5079 -1.4849 TS018 151
152 AL285 17.3910 16.4250 -1.8311 -1.5339 27.8990 25.2420 -0.4927 -0.3423 AL285 152
153 TS311 17.0290 13.7680 -1.8772 -1.8929 24.6380 22.7050 -0.9081 -0.6851 TS311 153
154 TS314 17.0290 13.5270 -1.8772 -1.9255 30.4350 25.9660 -0.1697 -0.2444 TS314 154
155 TS009             -1.0313 -0.9885             -1.0313 -0.9885 TS009 155
156 TS074             -1.0313 -0.9885             -1.0313 -0.9885 TS074 156
157 TS105             -1.0313 -0.9885             -1.0313 -0.9885 TS105 157
158 TS140             -1.0313 -0.9885             -1.0313 -0.9885 TS140 158
159 TS150             -1.0313 -0.9885             -1.0313 -0.9885 TS150 159
160 TS154             -1.0313 -0.9885             -1.0313 -0.9885 TS154 160
161 TS178             -1.0313 -0.9885             -1.0313 -0.9885 TS178 161
162 TS180             -1.0313 -0.9885             -1.0313 -0.9885 TS180 162
163 TS184             -1.0313 -0.9885             -1.0313 -0.9885 TS184 163
164 TS189             -1.0313 -0.9885             -1.0313 -0.9885 TS189 164
165 TS228             -1.0313 -0.9885             -1.0313 -0.9885 TS228 165
166 TS245             -1.0313 -0.9885             -1.0313 -0.9885 TS245 166
167 TS254             -1.0313 -0.9885             -1.0313 -0.9885 TS254 167
168 TS261             -1.0313 -0.9885             -1.0313 -0.9885 TS261 168
169 TS263             -1.0313 -0.9885             -1.0313 -0.9885 TS263 169
170 TS279             -1.0313 -0.9885             -1.0313 -0.9885 TS279 170
171 TS282             -1.0313 -0.9885             -1.0313 -0.9885 TS282 171
172 TS289             -1.0313 -0.9885             0.1532 0.2779 TS289 172
173 TS330             -1.0313 -0.9885             -1.0313 -0.9885 TS330 173
174 TS347             -1.0313 -0.9885             -1.0313 -0.9885 TS347 174
175 TS358             -1.0313 -0.9885             -1.0313 -0.9885 TS358 175
176 TS362             -1.0313 -0.9885             -1.0313 -0.9885 TS362 176
177 TS436             -1.0313 -0.9885             -1.0313 -0.9885 TS436 177
178 TS439             -1.0313 -0.9885             -1.0313 -0.9885 TS439 178