T0627

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0627

NP_791563.1 from Pseudomonas syringae pv. tomato str. DC3000

Target type: Human/Server

Target sequence:

>T0627 NP_791563.1, Pseudomonas syringae pv. tomato str. DC3000, 261 residues
MIDTFERTGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKVKSPRGRVAALEM

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0,  HorAServer

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: JCSG
PDB ID: 3oql

Jmol of T0627 structure : 3oql

PyMOL of T0627

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0627A3-2463-246
T0627B3-2463-246
T0627C3-2463-246
T0627D3-2463-246

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

TENA/THI-4, duplication: contains two structural repeats of 3-helical motif, HO-related family lacking the heme-binding site

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

2qcx_A | PyMOL of 2qcx A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

TENA/THI-4/PQQC family (PF03070).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0627 T0627 T0627 T0627
First score First Z-score Best score Best Z-score
1 TS449 69.4440 62.2430 2.0862 2.5506 69.4440 62.2430 2.0862 2.5506 TS449 1
2 TS453 69.4440 62.2430 2.0862 2.5506 69.4440 62.2430 2.0862 2.5506 TS453 2
3 TS346 69.4440 62.2430 2.0862 2.5506 69.4440 62.2430 2.0862 2.5506 TS346 3
4 TS055 67.1490 59.2290 1.7079 2.0695 68.4920 62.3280 1.9293 2.5642 TS055 4
5 TS149 66.5290 58.8840 1.6057 2.0144 66.5290 58.8840 1.6057 2.0144 TS149 5
6 TS104 66.3580 58.8820 1.5775 2.0141 66.3580 58.8820 1.5775 2.0141 TS104 6
7 TS476 64.6090 58.0930 1.2892 1.8881 64.6090 58.0930 1.2892 1.8881 TS476 7
8 TS423 64.6090 53.8410 1.2892 1.2094 65.0830 56.3790 1.3673 1.6145 TS423 8
9 TS102 64.5060 54.4240 1.2722 1.3024 64.5060 54.4240 1.2722 1.3024 TS102 9
10 TS002 64.3000 56.5840 1.2383 1.6472 65.1860 56.5840 1.3843 1.6472 TS002 10
11 TS228 63.8890 52.3320 1.1705 0.9685 66.5290 58.8840 1.6057 2.0144 TS228 11
12 TS395 63.7400 54.9590 1.1460 1.3878 63.7400 54.9590 1.1460 1.3878 TS395 12
13 TS386 63.3740 54.3210 1.0856 1.2860 63.3740 54.3210 1.0856 1.2860 TS386 13
14 TS080 62.5000 51.8940 0.9416 0.8986 62.6030 53.7880 0.9585 1.2009 TS080 14
15 TS399 62.1930 52.9030 0.8910 1.0596 64.5060 54.4240 1.2722 1.3024 TS399 15
16 TS119 62.1930 52.9030 0.8910 1.0596 62.1930 52.9030 0.8910 1.0596 TS119 16
17 TS113 62.1400 53.2240 0.8822 1.1109 62.1900 53.2240 0.8905 1.1109 TS113 17
18 TS365 62.1400 53.1550 0.8822 1.0998 62.1400 53.1550 0.8822 1.0998 TS365 18
19 TS240 62.0870 53.4780 0.8735 1.1514 62.0870 53.4780 0.8735 1.1514 TS240 19
20 TS037 62.0870 52.3070 0.8735 0.9645 64.4030 56.7220 1.2553 1.6693 TS037 20
21 TS420 62.0870 48.3820 0.8735 0.3379 62.0870 48.3820 0.8735 0.3379 TS420 21
22 TS471 62.0870 48.3820 0.8735 0.3379 62.0870 48.3820 0.8735 0.3379 TS471 22
23 TS321 61.9830 53.3750 0.8564 1.1350 63.0170 54.2700 1.0268 1.2778 TS321 23
24 TS199 61.9830 53.3750 0.8564 1.1350 61.9830 53.3750 0.8564 1.1350 TS199 24
25 TS481 61.9340 54.1500 0.8483 1.2587 61.9340 54.3390 0.8483 1.2889 TS481 25
26 TS088 61.9340 50.8230 0.8483 0.7276 61.9340 54.9930 0.8483 1.3933 TS088 26
27 TS061 61.7770 53.0300 0.8224 1.0799 61.7770 53.0300 0.8224 1.0799 TS061 27
28 TS147 61.5700 50.8260 0.7883 0.7281 63.5330 52.9150 1.1118 1.0615 TS147 28
29 TS253 61.5230 52.2630 0.7805 0.9575 63.7860 55.9670 1.1535 1.5487 TS253 29
30 TS436 61.5230 50.6860 0.7805 0.7057 61.5230 52.0490 0.7805 0.9233 TS436 30
31 TS047 61.4200 49.8970 0.7636 0.5798 61.4200 49.8970 0.7636 0.5798 TS047 31
32 TS400 61.3640 49.2420 0.7543 0.4752 61.6740 52.0320 0.8054 0.9206 TS400 32
33 TS033 61.2140 51.2690 0.7296 0.7988 61.2140 51.2690 0.7296 0.7988 TS033 33
34 TS242 61.0660 50.3420 0.7052 0.6508 61.1110 50.3420 0.7126 0.6508 TS242 34
35 TS452 61.0660 50.3420 0.7052 0.6508 61.1110 50.3420 0.7126 0.6508 TS452 35
36 TS429 61.0080 47.6340 0.6956 0.2185 61.0080 47.9770 0.6956 0.2733 TS429 36
37 TS016 60.9050 48.2850 0.6787 0.3224 61.0080 50.4460 0.6956 0.6674 TS016 37
38 TS424 60.8470 53.3400 0.6691 1.1294 60.8470 53.3400 0.6691 1.1294 TS424 38
39 TS361 60.5370 48.2780 0.6180 0.3213 60.5370 50.3100 0.6180 0.6457 TS361 39
40 TS484 60.3910 52.6410 0.5939 1.0178 62.4490 56.4810 0.9332 1.6308 TS484 40
41 TS096 60.2880 50.3430 0.5770 0.6510 64.8150 56.4470 1.3232 1.6254 TS096 41
42 TS236 60.0210 50.7920 0.5329 0.7226 63.5800 55.0070 1.1196 1.3955 TS236 42
43 TS114 60.0210 50.7920 0.5329 0.7226 63.5800 55.0070 1.1196 1.3955 TS114 43
44 TS403 60.0210 49.6210 0.5329 0.5357 60.1240 50.0690 0.5499 0.6072 TS403 44
45 TS207 60.0210 47.9340 0.5329 0.2664 60.0210 47.9340 0.5329 0.2664 TS207 45
46 AL285 59.9790 44.4100 0.5260 -0.2961 59.9790 44.4100 0.5260 -0.2961 AL285 46
47 TS407 59.8770 51.3030 0.5092 0.8042 62.6030 53.7880 0.9585 1.2009 TS407 47
48 TS470 59.8770 49.4510 0.5092 0.5086 59.8770 51.3030 0.5092 0.8042 TS470 48
49 TS418 59.7740 49.0050 0.4922 0.4374 63.5800 55.0070 1.1196 1.3955 TS418 49
50 TS295 59.7110 48.7600 0.4819 0.3983 63.3260 54.7180 1.0777 1.3494 TS295 50
51 TS094 59.6710 49.8630 0.4753 0.5743 62.1930 52.9030 0.8910 1.0596 TS094 51
52 TS297 59.5680 47.5650 0.4583 0.2075 62.0900 52.3910 0.8740 0.9779 TS297 52
53 TS366 59.1560 46.2620 0.3904 -0.0005 59.2590 46.3650 0.4073 0.0159 TS366 53
54 TS063 59.1560 46.2620 0.3904 -0.0005 59.2590 46.3650 0.4073 0.0159 TS063 54
55 TS186 58.9510 48.0450 0.3566 0.2841 60.5970 48.2850 0.6279 0.3224 TS186 55
56 TS214 58.8480 47.7370 0.3396 0.2350 60.0410 47.8740 0.5362 0.2568 TS214 56
57 TS477 58.4710 44.0770 0.2775 -0.3493 58.7450 46.9480 0.3226 0.1090 TS477 57
58 TS402 58.3330 42.4210 0.2547 -0.6137 58.3330 48.4220 0.2547 0.3443 TS402 58
59 TS382 58.2300 50.3430 0.2377 0.6510 58.9510 50.3430 0.3566 0.6510 TS382 59
60 TS490 58.1280 48.1140 0.2209 0.2951 61.8850 51.3370 0.8402 0.8096 TS490 60
61 TS276 58.0250 46.6390 0.2039 0.0597 58.0250 46.6390 0.2039 0.0597 TS276 61
62 TS077 58.0250 46.6390 0.2039 0.0597 59.6710 49.8630 0.4753 0.5743 TS077 62
63 TS286 58.0250 46.6390 0.2039 0.0597 58.0250 46.6390 0.2039 0.0597 TS286 63
64 TS245 57.8510 47.5900 0.1753 0.2115 57.8510 47.5900 0.1753 0.2115 TS245 64
65 TS457 57.8190 40.7060 0.1700 -0.8874 59.6710 47.4520 0.4753 0.1895 TS457 65
66 TS428 57.5410 48.6570 0.1242 0.3818 59.8770 51.3030 0.5092 0.8042 TS428 66
67 TS110 57.5410 48.6570 0.1242 0.3818 57.5410 48.6570 0.1242 0.3818 TS110 67
68 TS103 57.5410 45.1450 0.1242 -0.1788 57.9550 47.7620 0.1924 0.2389 TS103 68
69 TS380 57.3350 47.2110 0.0902 0.1510 59.8770 49.4510 0.5092 0.5086 TS380 69
70 TS127 57.2750 47.0970 0.0803 0.1328 57.2750 47.0970 0.0803 0.1328 TS127 70
71 TS218 57.1280 45.4550 0.0561 -0.1293 57.8510 46.4880 0.1753 0.0356 TS218 71
72 TS435 57.0700 46.5510 0.0465 0.0456 57.9220 46.8790 0.1870 0.0980 TS435 72
73 TS299 56.9960 46.0220 0.0343 -0.0388 57.6450 48.0030 0.1413 0.2774 TS299 73
74 TS300 56.9960 45.5420 0.0343 -0.1154 63.0170 54.2700 1.0268 1.2778 TS300 74
75 TS215 56.7620 46.0380 -0.0042 -0.0363 60.1850 50.9950 0.5600 0.7550 TS215 75
76 TS408 56.6870 40.9810 -0.0166 -0.8435 62.8600 53.7380 1.0009 1.1929 TS408 76
77 TS174 56.3020 48.3820 -0.0801 0.3379 56.3020 48.3820 -0.0801 0.3379 TS174 77
78 TS220 56.3020 42.7000 -0.0801 -0.5691 59.4260 49.5540 0.4349 0.5250 TS220 78
79 TS447 56.3020 42.7000 -0.0801 -0.5691 59.4260 49.5540 0.4349 0.5250 TS447 79
80 TS350 56.2760 41.9410 -0.0844 -0.6903 56.4810 45.2670 -0.0506 -0.1593 TS350 80
81 TS171 56.1480 47.4730 -0.1055 0.1928 56.1480 47.4730 -0.1055 0.1928 TS171 81
82 TS028 56.1480 45.4920 -0.1055 -0.1234 61.1680 54.0640 0.7220 1.2450 TS028 82
83 TS129 55.8880 41.6670 -0.1483 -0.7340 58.1610 48.1750 0.2264 0.3049 TS129 83
84 TS244 55.8640 50.4460 -0.1523 0.6674 57.6130 50.4460 0.1360 0.6674 TS244 84
85 TS208 55.6820 46.0400 -0.1823 -0.0359 56.8180 46.0400 0.0050 -0.0359 TS208 85
86 TS192 55.6820 45.5580 -0.1823 -0.1129 55.6820 45.5580 -0.1823 -0.1129 TS192 86
87 TS213 55.3500 43.2780 -0.2370 -0.4768 55.4750 45.1450 -0.2164 -0.1788 TS213 87
88 TS056 55.0620 43.2160 -0.2845 -0.4867 55.7380 44.9800 -0.1730 -0.2051 TS056 88
89 TS026 54.8550 45.3510 -0.3186 -0.1459 54.8550 45.3510 -0.3186 -0.1459 TS026 89
90 TS360 54.8350 44.0670 -0.3219 -0.3509 58.0580 48.2780 0.2094 0.3213 TS360 90
91 TS409 54.7130 47.2680 -0.3420 0.1601 58.6420 47.9850 0.3056 0.2745 TS409 91
92 TS001 54.3390 42.0110 -0.4036 -0.6791 65.0830 58.1270 1.3673 1.8935 TS001 92
93 TS117 54.1320 44.0770 -0.4378 -0.3493 54.3030 44.0770 -0.4096 -0.3493 TS117 93
94 TS419 54.0120 43.3130 -0.4575 -0.4713 61.9830 53.3750 0.8564 1.1350 TS419 94
95 TS296 54.0120 43.3130 -0.4575 -0.4713 61.3640 47.0390 0.7543 0.1235 TS296 95
96 TS301 53.9260 42.6310 -0.4717 -0.5801 54.6300 44.1360 -0.3557 -0.3399 TS301 96
97 TS018 53.6010 41.3920 -0.5253 -0.7779 58.1280 48.3880 0.2209 0.3389 TS018 97
98 TS173 53.4090 41.3570 -0.5569 -0.7835 54.2010 44.9800 -0.4264 -0.2051 TS173 98
99 TS165 53.3950 41.2550 -0.5592 -0.7998 55.8880 42.4590 -0.1483 -0.6076 TS165 99
100 TS353 53.3060 45.8680 -0.5739 -0.0634 53.3060 45.8680 -0.5739 -0.0634 TS353 100
101 TS166 53.2920 43.4160 -0.5762 -0.4548 63.5330 52.3760 1.1118 0.9755 TS166 101
102 TS302 53.1890 44.0670 -0.5932 -0.3509 57.8890 48.4630 0.1815 0.3509 TS302 102
103 TS142 53.1890 44.0670 -0.5932 -0.3509 57.8890 48.4630 0.1815 0.3509 TS142 103
104 TS319 53.1760 40.7450 -0.5953 -0.8812 55.3500 44.9800 -0.2370 -0.2051 TS319 104
105 TS273 53.1760 40.7450 -0.5953 -0.8812 56.8650 44.9800 0.0127 -0.2051 TS273 105
106 TS458 53.0740 43.9890 -0.6122 -0.3633 67.3550 59.3660 1.7418 2.0913 TS458 106
107 TS304 52.6750 45.8850 -0.6779 -0.0607 62.0370 53.7380 0.8653 1.1929 TS304 107
108 TS307 52.5720 41.9410 -0.6949 -0.6903 56.1480 45.0140 -0.1055 -0.1997 TS307 108
109 TS291 52.3660 41.5980 -0.7289 -0.7450 58.7450 48.7020 0.3226 0.3890 TS291 109
110 TS206 52.0660 39.1870 -0.7783 -1.1299 52.0660 39.1870 -0.7783 -1.1299 TS206 110
111 TS275 51.7560 41.3570 -0.8294 -0.7835 53.9090 44.6840 -0.4745 -0.2524 TS275 111
112 TS248 51.5500 40.1860 -0.8634 -0.9704 51.8600 40.1860 -0.8123 -0.9704 TS248 112
113 TS035 51.3430 40.6340 -0.8975 -0.8989 51.3430 40.6340 -0.8975 -0.8989 TS035 113
114 TS172 51.3320 43.5450 -0.8993 -0.4342 52.5720 44.2040 -0.6949 -0.3290 TS172 114
115 TS029 49.8970 40.3640 -1.1358 -0.9420 49.8970 40.3640 -1.1358 -0.9420 TS029 115
116 AL396 48.9670 38.2920 -1.2891 -1.2728 52.3660 43.6560 -0.7289 -0.4165 AL396 116
117 TS328 45.7640 34.1250 -1.8171 -1.9380 45.7640 34.1250 -1.8171 -1.9380 TS328 117
118 TS250 45.6610 35.1580 -1.8341 -1.7731 50.7200 41.1870 -1.0002 -0.8106 TS250 118
119 TS278 41.2190 34.2630 -2.5663 -1.9159 41.2190 34.2630 -2.5663 -1.9159 TS278 119
120 TS083 41.0120 31.6800 -2.6004 -2.3283 41.0860 32.2360 -2.5882 -2.2395 TS083 120
121 TS345 39.7540 28.9280 -2.8077 -2.7676 64.8150 56.9270 1.3232 1.7020 TS345 121
122 TS045 39.3600 30.8200 -2.8727 -2.4656 39.3600 30.8200 -2.8727 -2.4656 TS045 122
123 TS450 36.7770 27.5480 -3.2984 -2.9879 36.7770 27.5480 -3.2984 -2.9879 TS450 123
124 TS154 36.7280 28.5670 -3.3065 -2.8252 36.7280 28.5670 -3.3065 -2.8252 TS154 124
125 TS461 34.0530 27.3320 -3.7475 -3.0224 34.0530 27.3320 -3.7475 -3.0224 TS461 125
126 TS311 28.3060 21.6940 -4.6948 -3.9224 46.7080 37.6540 -1.6615 -1.3746 TS311 126
127 TS200 22.9420 16.5640 -5.5789 -4.7413 23.4570 18.1410 -5.4940 -4.4895 TS200 127
128 TS182 20.5760 13.4090 -5.9689 -5.2449 20.5760 13.4090 -5.9689 -5.2449 TS182 128
129 TS355 18.5950 15.0830 -6.2955 -4.9777 18.5950 15.0830 -6.2955 -4.9777 TS355 129
130 TS391 17.2520 14.3940 -6.5168 -5.0877 17.2520 14.3940 -6.5168 -5.0877 TS391 130
131 TS257 17.1490 14.0500 -6.5338 -5.1426 18.1350 14.3780 -6.3713 -5.0902 TS257 131
132 TS373 15.6760 12.6020 -6.7766 -5.3737 20.3700 16.2210 -6.0029 -4.7960 TS373 132
133 TS316 15.2890 11.3640 -6.8404 -5.5714 17.6950 13.1890 -6.4438 -5.2800 TS316 133
134 TS042 13.7400 11.8110 -7.0957 -5.5000 15.3930 13.1890 -6.8233 -5.2800 TS042 134
135 RANDOM 13.49 11.48 -7.1369 -5.5529 13.49 11.48 -7.1369 -5.5529 RANDOM 135
136 TS084 13.2230 11.3640 -7.1809 -5.5714 14.5660 12.7410 -6.9596 -5.3516 TS084 136
137 TS289 12.8600 11.3170 -7.2408 -5.5789 12.8600 11.3170 -7.2408 -5.5789 TS289 137
138 TS336 11.8310 11.3170 -7.4104 -5.5789 11.8310 11.3170 -7.4104 -5.5789 TS336 138
139 TS229 11.5700 10.0210 -7.4534 -5.7858 12.5510 11.0310 -7.2917 -5.6245 TS229 139
140 TS333 9.9790 9.2590 -7.7157 -5.9074 13.7400 11.6050 -7.0957 -5.5329 TS333 140
141 TS264 9.4260 7.5820 -7.8068 -6.1751 10.5370 9.4350 -7.6237 -5.8793 TS264 141
142 TS009             -7.1369 -5.5529             -7.1369 -5.5529 TS009 142
143 TS014             -7.1369 -5.5529             -7.1369 -5.5529 TS014 143
144 TS020             -7.1369 -5.5529             -7.1369 -5.5529 TS020 144
145 TS039             -7.1369 -5.5529             -7.1369 -5.5529 TS039 145
146 TS044             -7.1369 -5.5529             -7.1369 -5.5529 TS044 146
147 TS060             -7.1369 -5.5529             -7.1369 -5.5529 TS060 147
148 TS074             -7.1369 -5.5529             -7.1369 -5.5529 TS074 148
149 TS075             -7.1369 -5.5529             -7.1369 -5.5529 TS075 149
150 TS086             -7.1369 -5.5529             -7.1369 -5.5529 TS086 150
151 TS105             -7.1369 -5.5529             -7.1369 -5.5529 TS105 151
152 TS140             -7.1369 -5.5529             -7.1369 -5.5529 TS140 152
153 TS150             -7.1369 -5.5529             -7.1369 -5.5529 TS150 153
154 TS152             -7.1369 -5.5529             -7.1369 -5.5529 TS152 154
155 TS153             -7.1369 -5.5529             -7.1369 -5.5529 TS153 155
156 TS160             -7.1369 -5.5529             -7.1369 -5.5529 TS160 156
157 TS170             -7.1369 -5.5529             -7.1369 -5.5529 TS170 157
158 TS178             -7.1369 -5.5529             -7.1369 -5.5529 TS178 158
159 TS180             -7.1369 -5.5529             -7.1369 -5.5529 TS180 159
160 TS184             -7.1369 -5.5529             -7.1369 -5.5529 TS184 160
161 TS189             -7.1369 -5.5529             -7.1369 -5.5529 TS189 161
162 TS254             -7.1369 -5.5529             -7.1369 -5.5529 TS254 162
163 TS261             -7.1369 -5.5529             -7.1369 -5.5529 TS261 163
164 TS263             -7.1369 -5.5529             -7.1369 -5.5529 TS263 164
165 TS269             -7.1369 -5.5529             -7.1369 -5.5529 TS269 165
166 TS279             -7.1369 -5.5529             -7.1369 -5.5529 TS279 166
167 TS282             -7.1369 -5.5529             -7.1369 -5.5529 TS282 167
168 TS314             -7.1369 -5.5529             -7.1369 -5.5529 TS314 168
169 TS322             -7.1369 -5.5529             -7.1369 -5.5529 TS322 169
170 TS324             -7.1369 -5.5529             -7.1369 -5.5529 TS324 170
171 TS330             -7.1369 -5.5529             -7.1369 -5.5529 TS330 171
172 TS331             -7.1369 -5.5529             -7.1369 -5.5529 TS331 172
173 TS347             -7.1369 -5.5529             -7.1369 -5.5529 TS347 173
174 TS358             -7.1369 -5.5529             -7.1369 -5.5529 TS358 174
175 TS362             -7.1369 -5.5529             -7.1369 -5.5529 TS362 175
176 TS433             -7.1369 -5.5529             -7.1369 -5.5529 TS433 176
177 TS439             -7.1369 -5.5529             -7.1369 -5.5529 TS439 177
178 TS444             -7.1369 -5.5529             -7.1369 -5.5529 TS444 178