T0609

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0609

NP_347334.1 from CLOSTRIDIUM ACETOBUTYLICUM

Target type: Server only

Target sequence:

>T0609 NP_347334.1, CLOSTRIDIUM ACETOBUTYLICUM, 340 residues
MNNKDLWIKEEIIWSEHKCIRFAAGGYEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVASHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMGDKKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLYIENM

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0,  HorAServer

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: JCSG
PDB ID: 3os7

Jmol of T0609 structure : 3os7

PyMOL of T0609

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0609A3-3403-340
T0609B3-3403-340
T0609C3-3403-340
T0609D3-3403-340

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Aldose 1-epimerase (mutarotase), Galactose mutarotase-like

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

1z45_A | PyMOL of 1z45 A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Aldose 1-epimerase (PF01263).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0609 T0609 T0609 T0609
First score First Z-score Best score Best Z-score
1 TS104 73.4470 65.8040 2.3688 2.3287 73.4470 65.8040 2.3688 2.3287 TS104 1
2 TS490 71.3760 63.6340 2.0310 1.9984 71.9670 64.7930 2.1274 2.1748 TS490 2
3 TS077 70.4880 61.8100 1.8862 1.7208 72.4850 65.1870 2.2119 2.2347 TS077 3
4 TS286 70.4880 61.8100 1.8862 1.7208 72.4850 65.1870 2.2119 2.2347 TS286 4
5 TS276 70.3400 63.3880 1.8620 1.9610 70.3400 63.3880 1.8620 1.9610 TS276 5
6 TS037 69.9700 63.5110 1.8017 1.9797 69.9700 63.5110 1.8017 1.9797 TS037 6
7 TS407 69.6010 61.8590 1.7415 1.7283 72.4850 64.0530 2.2119 2.0622 TS407 7
8 TS470 69.5270 61.7360 1.7294 1.7095 69.5270 62.4510 1.7294 1.8184 TS470 8
9 TS094 68.9350 61.1930 1.6329 1.6269 68.9350 61.1930 1.6329 1.6269 TS094 9
10 TS236 68.9350 61.1930 1.6329 1.6269 69.5270 61.7360 1.7294 1.7095 TS236 10
11 TS114 68.9350 61.1930 1.6329 1.6269 69.5270 61.7360 1.7294 1.7095 TS114 11
12 TS452 68.1950 61.7850 1.5122 1.7170 68.4170 62.4510 1.5484 1.8184 TS452 12
13 TS113 67.8990 61.6370 1.4639 1.6945 72.3370 65.3110 2.1877 2.2536 TS113 13
14 TS449 67.6040 60.2070 1.4158 1.4768 67.6040 60.2070 1.4158 1.4768 TS449 14
15 TS453 67.6040 60.2070 1.4158 1.4768 67.6040 60.2070 1.4158 1.4768 TS453 15
16 TS346 67.6040 60.2070 1.4158 1.4768 67.6040 60.2070 1.4158 1.4768 TS346 16
17 TS002 67.0860 59.4920 1.3313 1.3680 71.5980 64.6450 2.0672 2.1523 TS002 17
18 TS129 66.9380 58.2100 1.3072 1.1729 67.8250 61.7360 1.4518 1.7095 TS129 18
19 TS395 66.5680 60.2560 1.2468 1.4843 66.5680 60.2560 1.2468 1.4843 TS395 19
20 TS127 64.6450 56.9530 0.9332 0.9816 64.6450 56.9530 0.9332 0.9816 TS127 20
21 TS174 64.5710 54.8570 0.9211 0.6626 64.5710 54.8570 0.9211 0.6626 TS174 21
22 TS207 63.6830 52.9340 0.7763 0.3700 63.6830 55.1780 0.7763 0.7115 TS207 22
23 TS481 63.6090 56.9030 0.7642 0.9740 63.6090 57.0270 0.7642 0.9929 TS481 23
24 TS321 63.1660 56.8050 0.6920 0.9591 65.0890 57.7910 1.0056 1.1091 TS321 24
25 TS103 62.8700 55.5230 0.6437 0.7640 62.8700 55.5230 0.6437 0.7640 TS103 25
26 TS047 62.6480 53.2790 0.6075 0.4225 62.6480 53.2790 0.6075 0.4225 TS047 26
27 TS307 62.4260 55.0790 0.5713 0.6964 62.4260 55.0790 0.5713 0.6964 TS307 27
28 TS088 61.7600 52.3920 0.4626 0.2875 67.8250 57.1750 1.4518 1.0154 TS088 28
29 TS018 61.3910 53.6490 0.4025 0.4788 61.3910 53.6490 0.4025 0.4788 TS018 29
30 TS435 61.0950 51.5780 0.3542 0.1636 61.3910 53.4020 0.4025 0.4412 TS435 30
31 TS345 60.9470 52.5150 0.3300 0.3062 60.9470 52.5150 0.3300 0.3062 TS345 31
32 TS366 60.7250 51.5530 0.2938 0.1598 61.1690 53.2790 0.3662 0.4225 TS366 32
33 TS063 60.7250 51.5530 0.2938 0.1598 60.7250 51.6030 0.2938 0.1674 TS063 33
34 TS102 60.2070 51.0360 0.2093 0.0811 60.3550 51.3810 0.2335 0.1336 TS102 34
35 TS213 59.7630 50.9860 0.1369 0.0735 60.4290 51.1090 0.2456 0.0922 TS213 35
36 TS119 59.0980 51.5530 0.0285 0.1598 59.1720 51.5530 0.0405 0.1598 TS119 36
37 TS429 59.0240 51.5780 0.0164 0.1636 59.7630 52.1700 0.1369 0.2537 TS429 37
38 TS391 58.7280 49.0140 -0.0319 -0.2266 58.7280 49.0140 -0.0319 -0.2266 TS391 38
39 TS220 58.5060 50.8140 -0.0681 0.0473 58.5060 50.8140 -0.0681 0.0473 TS220 39
40 TS447 58.5060 50.8140 -0.0681 0.0473 58.5060 50.8140 -0.0681 0.0473 TS447 40
41 TS380 58.4320 47.6080 -0.0802 -0.4406 58.7280 51.5780 -0.0319 0.1636 TS380 41
42 TS428 58.2840 48.5210 -0.1043 -0.3017 59.8370 51.6520 0.1490 0.1749 TS428 42
43 TS304 58.2100 47.8550 -0.1164 -0.4030 59.1720 51.2330 0.0405 0.1111 TS304 43
44 TS457 58.1360 48.3730 -0.1284 -0.3242 58.1360 48.3730 -0.1284 -0.3242 TS457 44
45 TS215 58.0620 49.1860 -0.1405 -0.2004 58.8760 51.0850 -0.0077 0.0886 TS215 45
46 TS080 58.0620 49.1860 -0.1405 -0.2004 58.8760 51.0850 -0.0077 0.0886 TS080 46
47 TS117 57.9880 50.2960 -0.1526 -0.0315 58.5060 51.5780 -0.0681 0.1636 TS117 47
48 TS028 57.9880 46.7460 -0.1526 -0.5718 59.0980 49.5320 0.0285 -0.1478 TS028 48
49 TS291 57.6920 49.2110 -0.2008 -0.1966 62.5000 55.0050 0.5833 0.6851 TS291 49
50 TS171 57.6180 47.8550 -0.2129 -0.4030 57.6180 47.8550 -0.2129 -0.4030 TS171 50
51 TS055 57.3960 47.2880 -0.2491 -0.4893 61.3910 54.7340 0.4025 0.6439 TS055 51
52 TS361 57.1750 46.3260 -0.2852 -0.6357 57.3220 50.5420 -0.2612 0.0059 TS361 52
53 TS476 56.9530 47.0910 -0.3214 -0.5193 56.9530 47.0910 -0.3214 -0.5193 TS476 53
54 TS189 56.8790 49.7780 -0.3334 -0.1104 58.1360 51.6770 -0.1284 0.1787 TS189 54
55 TS319 56.7310 49.6790 -0.3576 -0.1254 56.7310 49.6790 -0.3576 -0.1254 TS319 55
56 TS273 56.7310 49.6790 -0.3576 -0.1254 56.7310 49.6790 -0.3576 -0.1254 TS273 56
57 TS001 56.7310 49.6790 -0.3576 -0.1254 56.7310 49.6790 -0.3576 -0.1254 TS001 57
58 TS253 56.7310 47.9540 -0.3576 -0.3879 56.7310 47.9540 -0.3576 -0.3879 TS253 58
59 TS208 56.5830 49.7290 -0.3817 -0.1178 56.5830 50.4930 -0.3817 -0.0015 TS208 59
60 TS214 56.3610 45.9570 -0.4179 -0.6919 57.9880 46.9670 -0.1526 -0.5382 TS214 60
61 TS296 55.9910 47.6580 -0.4783 -0.4330 57.4700 51.2080 -0.2371 0.1073 TS296 61
62 TS218 55.8430 48.4960 -0.5024 -0.3055 55.9910 48.6930 -0.4783 -0.2755 TS218 62
63 TS420 55.6950 48.3970 -0.5266 -0.3205 55.6950 48.3970 -0.5266 -0.3205 TS420 63
64 TS471 55.6950 48.3970 -0.5266 -0.3205 55.6950 48.3970 -0.5266 -0.3205 TS471 64
65 TS275 55.5470 47.3620 -0.5507 -0.4780 56.7310 47.8550 -0.3576 -0.4030 TS275 65
66 TS056 54.8820 43.9840 -0.6592 -0.9921 54.8820 46.2030 -0.6592 -0.6544 TS056 66
67 TS245 54.6600 47.6580 -0.6954 -0.4330 54.6600 47.6580 -0.6954 -0.4330 TS245 67
68 TS165 54.5120 47.5100 -0.7195 -0.4555 57.5440 49.0140 -0.2250 -0.2266 TS165 68
69 TS419 54.3640 46.9670 -0.7436 -0.5382 63.1660 56.8050 0.6920 0.9591 TS419 69
70 TS166 54.3640 46.9670 -0.7436 -0.5382 65.9760 57.2490 1.1503 1.0267 TS166 70
71 TS436 54.3640 46.3760 -0.7436 -0.6281 54.3640 46.3760 -0.7436 -0.6281 TS436 71
72 TS409 54.2160 47.7070 -0.7678 -0.4255 57.0270 50.9120 -0.3093 0.0622 TS409 72
73 TS035 53.0330 44.1070 -0.9607 -0.9734 53.0330 44.1070 -0.9607 -0.9734 TS035 73
74 TS228 52.3670 44.4280 -1.0693 -0.9246 56.4350 50.0740 -0.4059 -0.0653 TS228 74
75 TS302 52.0710 38.9550 -1.1176 -1.7575 57.8400 50.1970 -0.1767 -0.0466 TS302 75
76 TS142 52.0710 38.9550 -1.1176 -1.7575 57.8400 50.1970 -0.1767 -0.0466 TS142 76
77 TS026 51.9970 42.3820 -1.1297 -1.2360 53.4020 46.2030 -0.9005 -0.6544 TS026 77
78 TS173 50.6660 41.7410 -1.3468 -1.3335 55.5470 47.3620 -0.5507 -0.4780 TS173 78
79 TS328 50.5180 42.3320 -1.3709 -1.2436 50.5180 42.3320 -1.3709 -1.2436 TS328 79
80 AL396 48.3730 43.3430 -1.7208 -1.0897 50.2960 44.8720 -1.4071 -0.8570 AL396 80
81 TS244 48.2250 41.5190 -1.7449 -1.3673 57.1010 48.2250 -0.2972 -0.3467 TS244 81
82 TS250 45.7840 38.0670 -2.1430 -1.8927 48.5950 41.2230 -1.6845 -1.4123 TS250 82
83 AL285 45.4880 40.6560 -2.1913 -1.4986 51.7010 44.4530 -1.1780 -0.9208 AL285 83
84 TS289 21.8200 17.0360 -6.0515 -5.0934 21.8200 17.0360 -6.0515 -5.0934 TS289 84
85 TS350 15.8280 13.0670 -7.0288 -5.6974 16.0500 13.9790 -6.9926 -5.5586 TS350 85
86 TS248 14.5710 12.2040 -7.2338 -5.8288 14.5710 12.2040 -7.2338 -5.8288 TS248 86
87 TS257 9.2460 8.3830 -8.1023 -6.4103 11.9080 10.5280 -7.6681 -6.0838 TS257 87
88 TS355 8.2100 7.1250 -8.2713 -6.6017 8.2100 7.5440 -8.2713 -6.5380 TS355 88
89 TS229 7.3220 5.8430 -8.4161 -6.7968 7.3220 6.1140 -8.4161 -6.7556 TS229 89
90 RANDOM 6.89 5.82 -8.4865 -6.8003 6.89 5.82 -8.4865 -6.8003 RANDOM 90
91 TS264 5.1780 4.8080 -8.7658 -6.9544 6.9530 6.0160 -8.4763 -6.7705 TS264 91
92 TS009             -8.4865 -6.8003             -8.4865 -6.8003 TS009 92
93 TS014             -8.4865 -6.8003             -8.4865 -6.8003 TS014 93
94 TS016             -8.4865 -6.8003             -8.4865 -6.8003 TS016 94
95 TS020             -8.4865 -6.8003             -8.4865 -6.8003 TS020 95
96 TS029             -8.4865 -6.8003             -8.4865 -6.8003 TS029 96
97 TS033             -8.4865 -6.8003             -8.4865 -6.8003 TS033 97
98 TS039             -8.4865 -6.8003             -8.4865 -6.8003 TS039 98
99 TS042             -8.4865 -6.8003             -8.4865 -6.8003 TS042 99
100 TS044             -8.4865 -6.8003             -8.4865 -6.8003 TS044 100
101 TS045             -8.4865 -6.8003             -8.4865 -6.8003 TS045 101
102 TS060             -8.4865 -6.8003             -8.4865 -6.8003 TS060 102
103 TS061             -8.4865 -6.8003             -8.4865 -6.8003 TS061 103
104 TS074             -8.4865 -6.8003             -8.4865 -6.8003 TS074 104
105 TS075             -8.4865 -6.8003             -8.4865 -6.8003 TS075 105
106 TS083             -8.4865 -6.8003             -8.4865 -6.8003 TS083 106
107 TS084             -8.4865 -6.8003             -8.4865 -6.8003 TS084 107
108 TS086             -8.4865 -6.8003             -8.4865 -6.8003 TS086 108
109 TS096             -8.4865 -6.8003             -8.4865 -6.8003 TS096 109
110 TS105             -8.4865 -6.8003             -8.4865 -6.8003 TS105 110
111 TS110             -8.4865 -6.8003             -8.4865 -6.8003 TS110 111
112 TS140             -8.4865 -6.8003             -8.4865 -6.8003 TS140 112
113 TS147             -8.4865 -6.8003             -8.4865 -6.8003 TS147 113
114 TS149             -8.4865 -6.8003             -8.4865 -6.8003 TS149 114
115 TS150             -8.4865 -6.8003             -8.4865 -6.8003 TS150 115
116 TS152             -8.4865 -6.8003             -8.4865 -6.8003 TS152 116
117 TS153             -8.4865 -6.8003             -8.4865 -6.8003 TS153 117
118 TS154             -8.4865 -6.8003             -8.4865 -6.8003 TS154 118
119 TS160             -8.4865 -6.8003             -8.4865 -6.8003 TS160 119
120 TS170             -8.4865 -6.8003             -8.4865 -6.8003 TS170 120
121 TS172             -8.4865 -6.8003             -8.4865 -6.8003 TS172 121
122 TS178             -8.4865 -6.8003             -8.4865 -6.8003 TS178 122
123 TS180             -8.4865 -6.8003             -8.4865 -6.8003 TS180 123
124 TS182             -8.4865 -6.8003             -8.4865 -6.8003 TS182 124
125 TS184             -8.4865 -6.8003             -8.4865 -6.8003 TS184 125
126 TS186             -8.4865 -6.8003             -8.4865 -6.8003 TS186 126
127 TS192             -8.4865 -6.8003             -8.4865 -6.8003 TS192 127
128 TS199             -8.4865 -6.8003             -8.4865 -6.8003 TS199 128
129 TS200             -8.4865 -6.8003             -8.4865 -6.8003 TS200 129
130 TS206             -8.4865 -6.8003             -8.4865 -6.8003 TS206 130
131 TS240             -8.4865 -6.8003             -8.4865 -6.8003 TS240 131
132 TS242             -8.4865 -6.8003             -8.4865 -6.8003 TS242 132
133 TS254             -8.4865 -6.8003             -8.4865 -6.8003 TS254 133
134 TS261             -8.4865 -6.8003             -8.4865 -6.8003 TS261 134
135 TS263             -8.4865 -6.8003             -8.4865 -6.8003 TS263 135
136 TS269             -8.4865 -6.8003             -8.4865 -6.8003 TS269 136
137 TS278             -8.4865 -6.8003             -8.4865 -6.8003 TS278 137
138 TS279             -8.4865 -6.8003             -8.4865 -6.8003 TS279 138
139 TS282             -8.4865 -6.8003             -8.4865 -6.8003 TS282 139
140 TS295             -8.4865 -6.8003             -8.4865 -6.8003 TS295 140
141 TS297             -8.4865 -6.8003             -8.4865 -6.8003 TS297 141
142 TS299             -8.4865 -6.8003             -8.4865 -6.8003 TS299 142
143 TS300             -8.4865 -6.8003             -8.4865 -6.8003 TS300 143
144 TS301             -8.4865 -6.8003             -8.4865 -6.8003 TS301 144
145 TS311             -8.4865 -6.8003             -8.4865 -6.8003 TS311 145
146 TS314             -8.4865 -6.8003             -8.4865 -6.8003 TS314 146
147 TS316             -8.4865 -6.8003             -8.4865 -6.8003 TS316 147
148 TS322             -8.4865 -6.8003             -8.4865 -6.8003 TS322 148
149 TS324             -8.4865 -6.8003             -8.4865 -6.8003 TS324 149
150 TS330             -8.4865 -6.8003             -8.4865 -6.8003 TS330 150
151 TS331             -8.4865 -6.8003             -8.4865 -6.8003 TS331 151
152 TS333             -8.4865 -6.8003             -8.4865 -6.8003 TS333 152
153 TS336             -8.4865 -6.8003             -8.4865 -6.8003 TS336 153
154 TS347             -8.4865 -6.8003             -8.4865 -6.8003 TS347 154
155 TS353             -8.4865 -6.8003             -8.4865 -6.8003 TS353 155
156 TS358             -8.4865 -6.8003             -8.4865 -6.8003 TS358 156
157 TS360             -8.4865 -6.8003             -8.4865 -6.8003 TS360 157
158 TS362             -8.4865 -6.8003             -8.4865 -6.8003 TS362 158
159 TS365             -8.4865 -6.8003             -8.4865 -6.8003 TS365 159
160 TS373             -8.4865 -6.8003             -8.4865 -6.8003 TS373 160
161 TS382             -8.4865 -6.8003             -8.4865 -6.8003 TS382 161
162 TS386             -8.4865 -6.8003             -8.4865 -6.8003 TS386 162
163 TS399             -8.4865 -6.8003             -8.4865 -6.8003 TS399 163
164 TS400             -8.4865 -6.8003             -8.4865 -6.8003 TS400 164
165 TS402             -8.4865 -6.8003             -8.4865 -6.8003 TS402 165
166 TS403             -8.4865 -6.8003             -8.4865 -6.8003 TS403 166
167 TS408             -8.4865 -6.8003             -8.4865 -6.8003 TS408 167
168 TS418             -8.4865 -6.8003             -8.4865 -6.8003 TS418 168
169 TS423             -8.4865 -6.8003             -8.4865 -6.8003 TS423 169
170 TS424             -8.4865 -6.8003             -8.4865 -6.8003 TS424 170
171 TS433             -8.4865 -6.8003             -8.4865 -6.8003 TS433 171
172 TS439             -8.4865 -6.8003             -8.4865 -6.8003 TS439 172
173 TS444             -8.4865 -6.8003             -8.4865 -6.8003 TS444 173
174 TS450             -8.4865 -6.8003             -8.4865 -6.8003 TS450 174
175 TS458             -8.4865 -6.8003             -8.4865 -6.8003 TS458 175
176 TS461             -8.4865 -6.8003             -8.4865 -6.8003 TS461 176
177 TS477             -8.4865 -6.8003             -8.4865 -6.8003 TS477 177
178 TS484             -8.4865 -6.8003             -8.4865 -6.8003 TS484 178