T0593

Targets
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519 520 521 522
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531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
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563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
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607 608 609 610
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619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0593

3NGW from Archaeoglobus fulgidus

Target type: Server only

Target sequence:

>T0593 3NGW, Archaeoglobus fulgidus, 208 residues
MKVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHAALRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMSTEGLLEHHHHHH

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: NESG
PDB ID: 3ngw

Jmol of T0593 structure : 3ngw

PyMOL of T0593

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0593A1-1951-195

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Molybdenum cofactor biosynthesis protein MobA, mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest, Rossman-like fold.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

2e8b_A | PyMOL of 2e8b A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

best match is Uncharacterized protein family UPF0007 (PF01128). There are other good hits, needs more check.

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0593 T0593 T0593 T0593
First score First Z-score Best score Best Z-score
1 TS236 70.6410 62.0940 1.8772 1.7936 70.7690 63.8460 1.9015 2.1101 TS236 1
2 TS114 70.6410 62.0940 1.8772 1.7936 70.7690 63.8460 1.9015 2.1101 TS114 2
3 TS047 70.5130 62.9910 1.8529 1.9556 70.5130 62.9910 1.8529 1.9556 TS047 3
4 TS452 70.1280 62.0940 1.7797 1.7936 70.5130 63.2480 1.8529 2.0021 TS452 4
5 TS113 69.7440 63.5900 1.7066 2.0639 70.0000 63.5900 1.7553 2.0639 TS113 5
6 TS253 68.2050 60.5130 1.4140 1.5079 68.2050 60.5130 1.4140 1.5079 TS253 6
7 TS104 67.6920 60.0850 1.3164 1.4306 67.6920 60.0850 1.3164 1.4306 TS104 7
8 TS481 67.0510 57.0510 1.1945 0.8824 67.1790 61.1110 1.2189 1.6160 TS481 8
9 TS055 66.7950 59.2740 1.1459 1.2840 68.2050 60.3420 1.4140 1.4770 TS055 9
10 TS321 66.5380 59.1030 1.0970 1.2532 67.8210 60.8970 1.3410 1.5773 TS321 10
11 TS207 66.5380 58.4190 1.0970 1.1296 70.3850 63.2050 1.8285 1.9943 TS207 11
12 TS088 66.0260 59.8720 0.9996 1.3921 71.0260 62.5640 1.9504 1.8785 TS088 12
13 TS276 65.7690 57.3930 0.9508 0.9442 65.7690 57.3930 0.9508 0.9442 TS276 13
14 TS077 65.7690 57.3930 0.9508 0.9442 65.7690 57.3930 0.9508 0.9442 TS077 14
15 TS286 65.7690 57.3930 0.9508 0.9442 65.7690 57.3930 0.9508 0.9442 TS286 15
16 TS470 65.1280 57.3500 0.8289 0.9364 70.6410 62.0940 1.8772 1.7936 TS470 16
17 TS407 65.1280 57.3500 0.8289 0.9364 66.9230 59.8720 1.1702 1.3921 TS407 17
18 TS428 65.1280 57.3500 0.8289 0.9364 67.4360 60.2560 1.2677 1.4615 TS428 18
19 TS380 64.7440 56.4530 0.7558 0.7744 67.5640 59.3590 1.2921 1.2994 TS380 19
20 TS457 64.3590 55.7260 0.6826 0.6430 67.6920 55.7260 1.3164 0.6430 TS457 20
21 TS037 63.9740 56.6240 0.6094 0.8053 65.3850 58.6320 0.8777 1.1681 TS037 21
22 TS174 63.9740 51.0680 0.6094 -0.1986 63.9740 51.0680 0.6094 -0.1986 TS174 22
23 TS449 63.8460 54.7010 0.5851 0.4578 63.8460 54.7010 0.5851 0.4578 TS449 23
24 TS453 63.8460 54.7010 0.5851 0.4578 63.8460 54.7010 0.5851 0.4578 TS453 24
25 TS346 63.8460 54.7010 0.5851 0.4578 63.8460 54.7010 0.5851 0.4578 TS346 25
26 TS002 63.7180 57.0510 0.5607 0.8824 69.3590 62.5210 1.6334 1.8707 TS002 26
27 TS395 63.3330 57.1790 0.4875 0.9055 63.3330 57.1790 0.4875 0.9055 TS395 27
28 TS127 63.3330 56.4100 0.4875 0.7666 63.3330 56.4100 0.4875 0.7666 TS127 28
29 TS490 63.2050 55.5130 0.4632 0.6045 63.4620 56.0260 0.5121 0.6972 TS490 29
30 TS345 63.0770 50.9400 0.4388 -0.2217 67.0510 57.2220 1.1945 0.9133 TS345 30
31 TS129 62.5640 53.1620 0.3413 0.1797 63.0770 53.8460 0.4388 0.3033 TS129 31
32 TS028 62.1790 53.0340 0.2681 0.1566 62.1790 53.0340 0.2681 0.1566 TS028 32
33 TS291 62.0510 49.7440 0.2437 -0.4378 62.0510 51.5380 0.2437 -0.1137 TS291 33
34 TS214 61.5380 52.3930 0.1462 0.0408 62.4360 52.9490 0.3170 0.1413 TS214 34
35 TS248 61.5380 51.8800 0.1462 -0.0519 61.5380 51.8800 0.1462 -0.0519 TS248 35
36 TS173 61.5380 47.5210 0.1462 -0.8395 62.0510 51.7090 0.2437 -0.0828 TS173 36
37 TS361 61.2820 51.4530 0.0975 -0.1290 62.1790 54.1030 0.2681 0.3498 TS361 37
38 TS001 61.1540 53.1200 0.0732 0.1722 61.1540 53.1200 0.0732 0.1722 TS001 38
39 TS208 61.0260 52.8210 0.0488 0.1181 61.0260 52.8210 0.0488 0.1181 TS208 39
40 TS275 61.0260 52.4790 0.0488 0.0563 62.9490 54.4020 0.4145 0.4038 TS275 40
41 TS094 61.0260 52.3930 0.0488 0.0408 65.7690 59.8720 0.9508 1.3921 TS094 41
42 TS215 61.0260 52.1370 0.0488 -0.0054 62.3080 53.3330 0.2926 0.2106 TS215 42
43 TS080 61.0260 52.1370 0.0488 -0.0054 62.3080 53.3330 0.2926 0.2106 TS080 43
44 TS102 61.0260 50.5130 0.0488 -0.2989 61.1540 52.5640 0.0732 0.0717 TS102 44
45 TS302 60.8970 53.1200 0.0243 0.1722 61.5380 55.3850 0.1462 0.5814 TS302 45
46 TS142 60.8970 53.1200 0.0243 0.1722 61.5380 55.3850 0.1462 0.5814 TS142 46
47 TS429 60.8970 52.0090 0.0243 -0.0286 60.8970 52.0090 0.0243 -0.0286 TS429 47
48 TS119 60.6410 53.9740 -0.0244 0.3265 61.0260 53.9740 0.0488 0.3265 TS119 48
49 TS074 60.6410 53.7180 -0.0244 0.2802 60.6410 53.7180 -0.0244 0.2802 TS074 49
50 TS409 60.6410 51.8380 -0.0244 -0.0595 61.4100 53.2050 0.1218 0.1875 TS409 50
51 TS419 60.3850 50.4700 -0.0731 -0.3066 66.5380 59.1030 1.0970 1.2532 TS419 51
52 TS166 60.3850 50.4700 -0.0731 -0.3066 60.3850 53.8890 -0.0731 0.3111 TS166 52
53 TS366 60.2560 51.7090 -0.0976 -0.0828 60.2560 52.1370 -0.0976 -0.0054 TS366 53
54 TS391 60.2560 48.9320 -0.0976 -0.5845 60.2560 48.9320 -0.0976 -0.5845 TS391 54
55 TS436 60.1280 51.4100 -0.1219 -0.1368 61.5380 52.9910 0.1462 0.1489 TS436 55
56 TS063 60.0000 52.1370 -0.1463 -0.0054 60.1280 52.2650 -0.1219 0.0177 TS063 56
57 TS117 59.8720 52.3500 -0.1706 0.0330 59.8720 52.3500 -0.1706 0.0330 TS117 57
58 TS218 59.7440 54.6150 -0.1950 0.4423 61.4100 55.0850 0.1218 0.5272 TS218 58
59 TS018 59.7440 51.8800 -0.1950 -0.0519 59.7440 51.8800 -0.1950 -0.0519 TS018 59
60 TS296 59.6150 50.8120 -0.2195 -0.2448 61.2820 53.0770 0.0975 0.1644 TS296 60
61 TS476 59.6150 49.1880 -0.2195 -0.5383 59.6150 49.1880 -0.2195 -0.5383 TS476 61
62 TS420 59.6150 49.1880 -0.2195 -0.5383 59.6150 49.1880 -0.2195 -0.5383 TS420 62
63 TS171 59.6150 49.1880 -0.2195 -0.5383 59.6150 49.1880 -0.2195 -0.5383 TS171 63
64 TS471 59.6150 49.1880 -0.2195 -0.5383 59.6150 49.1880 -0.2195 -0.5383 TS471 64
65 TS165 59.3590 49.3590 -0.2682 -0.5074 60.2560 49.9150 -0.0976 -0.4069 TS165 65
66 TS220 59.2310 51.6240 -0.2925 -0.0981 59.2310 53.3760 -0.2925 0.2184 TS220 66
67 TS447 59.2310 51.6240 -0.2925 -0.0981 59.2310 53.3760 -0.2925 0.2184 TS447 67
68 TS035 59.2310 50.5980 -0.2925 -0.2835 59.2310 50.5980 -0.2925 -0.2835 TS035 68
69 TS213 59.1030 50.4700 -0.3168 -0.3066 59.6150 52.6920 -0.2195 0.0948 TS213 69
70 TS319 58.4620 50.0850 -0.4387 -0.3762 60.0000 51.6240 -0.1463 -0.0981 TS319 70
71 TS056 58.4620 50.0850 -0.4387 -0.3762 60.6410 51.0680 -0.0244 -0.1986 TS056 71
72 TS273 58.4620 50.0850 -0.4387 -0.3762 60.3850 51.6240 -0.0731 -0.0981 TS273 72
73 TS314 58.4620 49.5730 -0.4387 -0.4687 58.4620 49.5730 -0.4387 -0.4687 TS314 73
74 TS304 57.9490 47.6920 -0.5363 -0.8086 58.0770 48.0770 -0.5119 -0.7390 TS304 74
75 TS328 57.1790 47.5210 -0.6827 -0.8395 57.1790 47.5210 -0.6827 -0.8395 TS328 75
76 TS026 56.7950 47.0510 -0.7557 -0.9244 59.6150 51.2390 -0.2195 -0.1677 TS026 76
77 AL396 56.4100 46.3250 -0.8289 -1.0555 56.4100 46.3250 -0.8289 -1.0555 AL396 77
78 TS435 56.2820 48.1620 -0.8533 -0.7236 56.6670 49.9150 -0.7801 -0.4069 TS435 78
79 AL285 55.8970 46.4960 -0.9265 -1.0246 57.3080 49.4870 -0.6582 -0.4842 AL285 79
80 TS307 55.8970 46.1540 -0.9265 -1.0864 58.9740 53.2910 -0.3414 0.2031 TS307 80
81 TS103 55.3850 46.5810 -1.0239 -1.0093 58.0770 48.7610 -0.5119 -0.6154 TS103 81
82 TS245 52.8210 46.5810 -1.5114 -1.0093 52.8210 46.5810 -1.5114 -1.0093 TS245 82
83 TS244 50.8970 43.8030 -1.8773 -1.5112 57.1790 50.6840 -0.6827 -0.2680 TS244 83
84 TS250 39.4870 30.2560 -4.0470 -3.9588 50.2560 42.7780 -1.9992 -1.6964 TS250 84
85 TS289 34.8720 27.4790 -4.9246 -4.4606 34.8720 27.4790 -4.9246 -4.4606 TS289 85
86 TS189 22.9490 18.6750 -7.1918 -6.0513 22.9490 18.8890 -7.1918 -6.0126 TS189 86
87 TS350 17.5640 11.6240 -8.2158 -7.3252 17.5640 14.1880 -8.2158 -6.8620 TS350 87
88 TS014 16.9230 15.6840 -8.3377 -6.5917 18.9740 16.0680 -7.9477 -6.5223 TS014 88
89 TS257 16.2820 15.5980 -8.4596 -6.6072 16.2820 15.5980 -8.4596 -6.6072 TS257 89
90 TS355 15.1280 12.4790 -8.6791 -7.1707 16.0260 14.2310 -8.5083 -6.8542 TS355 90
91 RANDOM 13.03 10.79 -9.0780 -7.4759 13.03 10.79 -9.0780 -7.4759 RANDOM 91
92 TS229 11.4100 9.9570 -9.3861 -7.6264 11.4100 9.9570 -9.3861 -7.6264 TS229 92
93 TS264 11.4100 9.9570 -9.3861 -7.6264 11.9230 10.5560 -9.2885 -7.5182 TS264 93
94 TS444 10.8970 10.1710 -9.4836 -7.5878 15.8970 11.3680 -8.5328 -7.3715 TS444 94
95 TS009             -9.0780 -7.4759             -9.0780 -7.4759 TS009 95
96 TS016             -9.0780 -7.4759             -9.0780 -7.4759 TS016 96
97 TS020             -9.0780 -7.4759             -9.0780 -7.4759 TS020 97
98 TS029             -9.0780 -7.4759             -9.0780 -7.4759 TS029 98
99 TS033             -9.0780 -7.4759             -9.0780 -7.4759 TS033 99
100 TS039             -9.0780 -7.4759             -9.0780 -7.4759 TS039 100
101 TS042             -9.0780 -7.4759             -9.0780 -7.4759 TS042 101
102 TS044             -9.0780 -7.4759             -9.0780 -7.4759 TS044 102
103 TS045             -9.0780 -7.4759             -9.0780 -7.4759 TS045 103
104 TS060             -9.0780 -7.4759             -9.0780 -7.4759 TS060 104
105 TS061             -9.0780 -7.4759             -9.0780 -7.4759 TS061 105
106 TS075             -9.0780 -7.4759             -9.0780 -7.4759 TS075 106
107 TS083             -9.0780 -7.4759             -9.0780 -7.4759 TS083 107
108 TS084             -9.0780 -7.4759             -9.0780 -7.4759 TS084 108
109 TS086             -9.0780 -7.4759             -9.0780 -7.4759 TS086 109
110 TS096             -9.0780 -7.4759             -9.0780 -7.4759 TS096 110
111 TS105             -9.0780 -7.4759             -9.0780 -7.4759 TS105 111
112 TS110             -9.0780 -7.4759             -9.0780 -7.4759 TS110 112
113 TS140             -9.0780 -7.4759             -9.0780 -7.4759 TS140 113
114 TS147             -9.0780 -7.4759             -9.0780 -7.4759 TS147 114
115 TS149             -9.0780 -7.4759             -9.0780 -7.4759 TS149 115
116 TS150             -9.0780 -7.4759             -9.0780 -7.4759 TS150 116
117 TS152             -9.0780 -7.4759             -9.0780 -7.4759 TS152 117
118 TS153             -9.0780 -7.4759             -9.0780 -7.4759 TS153 118
119 TS154             -9.0780 -7.4759             -9.0780 -7.4759 TS154 119
120 TS160             -9.0780 -7.4759             -9.0780 -7.4759 TS160 120
121 TS170             -9.0780 -7.4759             -9.0780 -7.4759 TS170 121
122 TS172             -9.0780 -7.4759             -9.0780 -7.4759 TS172 122
123 TS178             -9.0780 -7.4759             -9.0780 -7.4759 TS178 123
124 TS180             -9.0780 -7.4759             -9.0780 -7.4759 TS180 124
125 TS182             -9.0780 -7.4759             -9.0780 -7.4759 TS182 125
126 TS184             -9.0780 -7.4759             -9.0780 -7.4759 TS184 126
127 TS186             -9.0780 -7.4759             -9.0780 -7.4759 TS186 127
128 TS192             -9.0780 -7.4759             -9.0780 -7.4759 TS192 128
129 TS199             -9.0780 -7.4759             -9.0780 -7.4759 TS199 129
130 TS200             -9.0780 -7.4759             -9.0780 -7.4759 TS200 130
131 TS206             -9.0780 -7.4759             -9.0780 -7.4759 TS206 131
132 TS228             -9.0780 -7.4759             -9.0780 -7.4759 TS228 132
133 TS240             -9.0780 -7.4759             -9.0780 -7.4759 TS240 133
134 TS242             -9.0780 -7.4759             -9.0780 -7.4759 TS242 134
135 TS254             -9.0780 -7.4759             -9.0780 -7.4759 TS254 135
136 TS261             -9.0780 -7.4759             -9.0780 -7.4759 TS261 136
137 TS263             -9.0780 -7.4759             -9.0780 -7.4759 TS263 137
138 TS269             -9.0780 -7.4759             -9.0780 -7.4759 TS269 138
139 TS278             -9.0780 -7.4759             -9.0780 -7.4759 TS278 139
140 TS279             -9.0780 -7.4759             -9.0780 -7.4759 TS279 140
141 TS282             -9.0780 -7.4759             -9.0780 -7.4759 TS282 141
142 TS295             -9.0780 -7.4759             -9.0780 -7.4759 TS295 142
143 TS297             -9.0780 -7.4759             -9.0780 -7.4759 TS297 143
144 TS299             -9.0780 -7.4759             -9.0780 -7.4759 TS299 144
145 TS300             -9.0780 -7.4759             -9.0780 -7.4759 TS300 145
146 TS301             -9.0780 -7.4759             -9.0780 -7.4759 TS301 146
147 TS311             -9.0780 -7.4759             -9.0780 -7.4759 TS311 147
148 TS316             -9.0780 -7.4759             -9.0780 -7.4759 TS316 148
149 TS322             -9.0780 -7.4759             -9.0780 -7.4759 TS322 149
150 TS324             -9.0780 -7.4759             -9.0780 -7.4759 TS324 150
151 TS330             -9.0780 -7.4759             -9.0780 -7.4759 TS330 151
152 TS331             -9.0780 -7.4759             -9.0780 -7.4759 TS331 152
153 TS333             -9.0780 -7.4759             -9.0780 -7.4759 TS333 153
154 TS336             -9.0780 -7.4759             -9.0780 -7.4759 TS336 154
155 TS347             -9.0780 -7.4759             -9.0780 -7.4759 TS347 155
156 TS353             -9.0780 -7.4759             -9.0780 -7.4759 TS353 156
157 TS358             -9.0780 -7.4759             -9.0780 -7.4759 TS358 157
158 TS360             -9.0780 -7.4759             -9.0780 -7.4759 TS360 158
159 TS362             -9.0780 -7.4759             -9.0780 -7.4759 TS362 159
160 TS365             -9.0780 -7.4759             -9.0780 -7.4759 TS365 160
161 TS373             -9.0780 -7.4759             -9.0780 -7.4759 TS373 161
162 TS382             -9.0780 -7.4759             -9.0780 -7.4759 TS382 162
163 TS386             -9.0780 -7.4759             -9.0780 -7.4759 TS386 163
164 TS399             -9.0780 -7.4759             -9.0780 -7.4759 TS399 164
165 TS400             -9.0780 -7.4759             -9.0780 -7.4759 TS400 165
166 TS402             -9.0780 -7.4759             -9.0780 -7.4759 TS402 166
167 TS403             -9.0780 -7.4759             -9.0780 -7.4759 TS403 167
168 TS408             -9.0780 -7.4759             -9.0780 -7.4759 TS408 168
169 TS418             -9.0780 -7.4759             -9.0780 -7.4759 TS418 169
170 TS423             -9.0780 -7.4759             -9.0780 -7.4759 TS423 170
171 TS424             -9.0780 -7.4759             -9.0780 -7.4759 TS424 171
172 TS433             -9.0780 -7.4759             -9.0780 -7.4759 TS433 172
173 TS439             -9.0780 -7.4759             -9.0780 -7.4759 TS439 173
174 TS450             -9.0780 -7.4759             -9.0780 -7.4759 TS450 174
175 TS458             -9.0780 -7.4759             -9.0780 -7.4759 TS458 175
176 TS461             -9.0780 -7.4759             -9.0780 -7.4759 TS461 176
177 TS477             -9.0780 -7.4759             -9.0780 -7.4759 TS477 177
178 TS484             -9.0780 -7.4759             -9.0780 -7.4759 TS484 178