T0638

Targets
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643      

T0638

3NXH from Bacillus subtilis

Target type: Server only

Target sequence:

>T0638 3NXH, Bacillus subtilis, 269 residues
MKKKPFSILFMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPIDKYVTVDFDGFKDVINEVGGIDVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILNALIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLGPNNTYYFEPDATNLEKVRKTLQEHLDYTPLEHHHHHH

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: NESG
PDB ID: 3nxh

Jmol of T0638 structure : 3nxh

PyMOL of T0638

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0638A72-3311-260

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Not mapped to SCOP by sequence. needs to take template pdb 3mej to search against SCOP through HorA server.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

3mej_A | PyMOL of 3mej A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Cell envelope-related transcriptional attenuator domain (PF03816).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0638 T0638 T0638 T0638
First score First Z-score Best score Best Z-score
1 TS104 82.6830 73.3560 0.7834 0.6785 82.6830 73.3560 0.7834 0.6785 TS104 1
2 TS380 81.6510 75.0760 0.7490 0.7398 81.6510 75.0760 0.7490 0.7398 TS380 2
3 TS490 81.1930 73.6240 0.7337 0.6880 81.9950 77.4080 0.7604 0.8230 TS490 3
4 TS236 81.0780 76.5670 0.7299 0.7930 82.6830 76.5670 0.7834 0.7930 TS236 4
5 TS114 81.0780 76.5670 0.7299 0.7930 82.6830 76.5670 0.7834 0.7930 TS114 5
6 TS173 80.9630 76.3760 0.7261 0.7862 80.9630 76.3760 0.7261 0.7862 TS173 6
7 TS056 80.9630 76.3760 0.7261 0.7862 80.9630 76.3760 0.7261 0.7862 TS056 7
8 TS419 80.9630 74.3880 0.7261 0.7153 80.9630 74.4270 0.7261 0.7167 TS419 8
9 TS428 80.9630 74.3880 0.7261 0.7153 81.1930 74.6180 0.7337 0.7235 TS428 9
10 TS420 80.9630 74.0830 0.7261 0.7044 80.9630 74.0830 0.7261 0.7044 TS420 10
11 TS471 80.9630 74.0830 0.7261 0.7044 80.9630 74.0830 0.7261 0.7044 TS471 11
12 TS113 80.8490 76.3380 0.7223 0.7848 80.8490 76.3380 0.7223 0.7848 TS113 12
13 TS361 80.7340 75.6120 0.7184 0.7589 81.0780 75.7260 0.7299 0.7630 TS361 13
14 TS088 80.7340 74.1590 0.7184 0.7071 80.7340 74.1590 0.7184 0.7071 TS088 14
15 TS345 80.6190 74.0440 0.7146 0.7030 80.6190 74.1210 0.7146 0.7057 TS345 15
16 TS055 80.5050 75.0000 0.7108 0.7371 80.5050 75.1150 0.7108 0.7412 TS055 16
17 TS037 80.5050 73.9300 0.7108 0.6989 80.8490 75.4970 0.7223 0.7548 TS037 17
18 TS429 80.3900 75.8030 0.7070 0.7657 80.7340 76.2230 0.7184 0.7807 TS429 18
19 TS449 80.3900 75.6500 0.7070 0.7603 80.3900 75.6500 0.7070 0.7603 TS449 19
20 TS453 80.3900 75.6500 0.7070 0.7603 80.3900 75.6500 0.7070 0.7603 TS453 20
21 TS346 80.3900 75.6500 0.7070 0.7603 80.3900 75.6500 0.7070 0.7603 TS346 21
22 TS273 80.3900 75.0380 0.7070 0.7385 80.3900 75.6880 0.7070 0.7616 TS273 22
23 TS001 80.3900 75.0380 0.7070 0.7385 80.3900 75.6880 0.7070 0.7616 TS001 23
24 TS314 80.3900 74.8090 0.7070 0.7303 80.3900 74.8090 0.7070 0.7303 TS314 24
25 TS275 80.2750 75.6880 0.7032 0.7616 80.2750 75.6880 0.7032 0.7616 TS275 25
26 TS129 80.2750 75.2290 0.7032 0.7453 80.2750 75.2290 0.7032 0.7453 TS129 26
27 TS319 80.2750 71.6360 0.7032 0.6171 80.3900 75.0380 0.7070 0.7385 TS319 27
28 TS296 80.2750 71.6360 0.7032 0.6171 80.3900 75.6880 0.7070 0.7616 TS296 28
29 TS481 80.1610 74.1590 0.6994 0.7071 80.1610 74.8090 0.6994 0.7303 TS481 29
30 TS103 80.1610 73.3560 0.6994 0.6785 80.1610 73.3560 0.6994 0.6785 TS103 30
31 TS094 79.9310 74.7320 0.6917 0.7275 80.6190 74.7320 0.7146 0.7275 TS094 31
32 TS291 79.9310 74.7320 0.6917 0.7275 80.6190 75.6500 0.7146 0.7603 TS291 32
33 TS407 79.9310 74.7320 0.6917 0.7275 80.6190 74.7320 0.7146 0.7275 TS407 33
34 TS452 79.8170 74.7710 0.6879 0.7289 80.5050 75.2680 0.7108 0.7467 TS452 34
35 TS321 79.8170 74.0830 0.6879 0.7044 79.8170 74.0830 0.6879 0.7044 TS321 35
36 TS174 79.7020 74.4270 0.6841 0.7167 79.7020 74.4270 0.6841 0.7167 TS174 36
37 TS028 79.5870 74.5410 0.6802 0.7207 79.5870 74.5410 0.6802 0.7207 TS028 37
38 TS142 79.5870 74.5410 0.6802 0.7207 79.5870 74.5410 0.6802 0.7207 TS142 38
39 TS470 79.5870 74.5410 0.6802 0.7207 82.6830 75.2680 0.7834 0.7467 TS470 39
40 TS476 79.5870 74.1590 0.6802 0.7071 79.5870 74.1590 0.6802 0.7071 TS476 40
41 TS171 79.5870 74.1590 0.6802 0.7071 79.5870 74.1590 0.6802 0.7071 TS171 41
42 TS276 79.4720 72.5150 0.6764 0.6485 79.9310 74.7320 0.6917 0.7275 TS276 42
43 TS077 79.4720 72.5150 0.6764 0.6485 79.9310 74.7320 0.6917 0.7275 TS077 43
44 TS286 79.4720 72.5150 0.6764 0.6485 79.9310 74.7320 0.6917 0.7275 TS286 44
45 TS119 79.3580 74.0060 0.6726 0.7016 79.7020 74.7320 0.6841 0.7275 TS119 45
46 TS026 79.3580 73.5470 0.6726 0.6853 79.3580 73.5470 0.6726 0.6853 TS026 46
47 TS127 79.2430 73.4330 0.6688 0.6812 80.0460 75.0000 0.6955 0.7371 TS127 47
48 TS215 79.0140 74.1970 0.6612 0.7085 79.7020 75.2680 0.6841 0.7467 TS215 48
49 TS080 79.0140 74.1970 0.6612 0.7085 79.7020 75.2680 0.6841 0.7467 TS080 49
50 TS002 79.0140 74.1970 0.6612 0.7085 81.0780 76.2610 0.7299 0.7821 TS002 50
51 TS208 78.8990 72.7060 0.6573 0.6553 80.5050 74.5410 0.7108 0.7207 TS208 51
52 TS166 78.7840 73.8150 0.6535 0.6948 78.7840 73.8150 0.6535 0.6948 TS166 52
53 TS117 78.4400 73.3940 0.6420 0.6798 78.4400 73.3940 0.6420 0.6798 TS117 53
54 TS102 78.4400 72.9360 0.6420 0.6635 78.4400 72.9360 0.6420 0.6635 TS102 54
55 TS366 78.3260 70.2220 0.6382 0.5667 78.3260 70.2220 0.6382 0.5667 TS366 55
56 TS063 78.3260 70.2220 0.6382 0.5667 78.6700 73.8530 0.6497 0.6962 TS063 56
57 TS213 77.9820 72.5540 0.6268 0.6499 79.7020 75.1150 0.6841 0.7412 TS213 57
58 TS060 77.4080 73.2030 0.6077 0.6730 80.6190 75.6500 0.7146 0.7603 TS060 58
59 TS165 77.0640 72.0950 0.5962 0.6335 79.1280 73.3180 0.6650 0.6771 TS165 59
60 TS328 76.8350 69.9540 0.5886 0.5571 76.8350 69.9540 0.5886 0.5571 TS328 60
61 TS228 76.1470 71.0240 0.5657 0.5953 78.0960 73.9680 0.6306 0.7003 TS228 61
62 TS218 76.0320 67.1640 0.5618 0.4576 76.0320 69.7250 0.5618 0.5489 TS218 62
63 TS395 75.8030 70.2220 0.5542 0.5667 75.8030 70.2220 0.5542 0.5667 TS395 63
64 TS409 75.5730 70.5280 0.5465 0.5776 75.5730 70.5280 0.5465 0.5776 TS409 64
65 TS307 75.5730 70.2980 0.5465 0.5694 75.5730 70.7570 0.5465 0.5858 TS307 65
66 TS457 74.8850 69.6870 0.5236 0.5476 75.4590 71.6360 0.5427 0.6171 TS457 66
67 TS253 73.9680 67.6220 0.4931 0.4739 74.5410 69.5720 0.5122 0.5435 TS253 67
68 TS214 73.9680 64.4880 0.4931 0.3621 74.8850 68.1570 0.5236 0.4930 TS214 68
69 AL396 73.8530 68.8070 0.4893 0.5162 73.8530 68.8070 0.4893 0.5162 AL396 69
70 TS245 71.9040 65.7870 0.4243 0.4085 71.9040 65.7870 0.4243 0.4085 TS245 70
71 TS047 71.6740 66.0170 0.4167 0.4167 71.6740 66.0170 0.4167 0.4167 TS047 71
72 TS391 70.6420 62.3470 0.3823 0.2858 70.6420 62.3470 0.3823 0.2858 TS391 72
73 AL285 69.7250 62.4620 0.3518 0.2899 69.7250 62.4620 0.3518 0.2899 AL285 73
74 TS248 52.7520 48.4710 -0.2136 -0.2092 53.7840 50.1910 -0.1792 -0.1478 TS248 74
75 TS257 16.0550 13.9140 -1.4359 -1.4418 16.0550 13.9530 -1.4359 -1.4404 TS257 75
76 TS435 13.8760 10.8180 -1.5084 -1.5522 13.8760 11.2770 -1.5084 -1.5359 TS435 76
77 TS302 13.3030 11.5440 -1.5275 -1.5263 13.3030 11.5440 -1.5275 -1.5263 TS302 77
78 TS244 13.0730 11.1240 -1.5352 -1.5413 66.6280 60.1300 0.2486 0.2067 TS244 78
79 TS304 12.9590 12.0030 -1.5390 -1.5100 13.1880 12.0030 -1.5314 -1.5100 TS304 79
80 TS220 12.7290 10.8180 -1.5466 -1.5522 15.1380 13.0730 -1.4664 -1.4718 TS220 80
81 TS447 12.7290 10.8180 -1.5466 -1.5522 15.1380 13.0730 -1.4664 -1.4718 TS447 81
82 TS355 11.6970 9.6330 -1.5810 -1.5945 12.5000 11.6970 -1.5543 -1.5209 TS355 82
83 TS207 11.1240 9.4040 -1.6001 -1.6027 11.1240 9.9390 -1.6001 -1.5836 TS207 83
84 RANDOM 10.86 9.39 -1.6089 -1.6032 10.86 9.39 -1.6089 -1.6032 RANDOM 84
85 TS229 10.5500 9.4800 -1.6192 -1.6000 12.2710 10.2450 -1.5619 -1.5727 TS229 85
86 TS289 9.2890 8.0660 -1.6612 -1.6504 9.2890 8.0660 -1.6612 -1.6504 TS289 86
87 TS018 9.1740 8.5630 -1.6651 -1.6327 9.1740 8.5630 -1.6651 -1.6327 TS018 87
88 TS436 7.9130 6.7660 -1.7071 -1.6968 7.9130 6.7660 -1.7071 -1.6968 TS436 88
89 TS189 7.7980 6.9570 -1.7109 -1.6899 8.4860 7.3780 -1.6880 -1.6749 TS189 89
90 TS178 6.5370 5.3900 -1.7529 -1.7458 6.5370 5.3900 -1.7529 -1.7458 TS178 90
91 TS362 6.1930 5.6960 -1.7643 -1.7349 6.1930 5.6960 -1.7643 -1.7349 TS362 91
92 TS009             -1.6089 -1.6032             -1.6089 -1.6032 TS009 92
93 TS014             -1.6089 -1.6032             -1.6089 -1.6032 TS014 93
94 TS016             -1.6089 -1.6032             -1.6089 -1.6032 TS016 94
95 TS020             -1.6089 -1.6032             -1.6089 -1.6032 TS020 95
96 TS029             -1.6089 -1.6032             -1.6089 -1.6032 TS029 96
97 TS033             -1.6089 -1.6032             -1.6089 -1.6032 TS033 97
98 TS035             -1.6089 -1.6032             -1.6089 -1.6032 TS035 98
99 TS039             -1.6089 -1.6032             -1.6089 -1.6032 TS039 99
100 TS042             -1.6089 -1.6032             -1.6089 -1.6032 TS042 100
101 TS044             -1.6089 -1.6032             -1.6089 -1.6032 TS044 101
102 TS045             -1.6089 -1.6032             -1.6089 -1.6032 TS045 102
103 TS061             -1.6089 -1.6032             -1.6089 -1.6032 TS061 103
104 TS074             -1.6089 -1.6032             -1.6089 -1.6032 TS074 104
105 TS075             -1.6089 -1.6032             -1.6089 -1.6032 TS075 105
106 TS083             -1.6089 -1.6032             -1.6089 -1.6032 TS083 106
107 TS084             -1.6089 -1.6032             -1.6089 -1.6032 TS084 107
108 TS086             -1.6089 -1.6032             -1.6089 -1.6032 TS086 108
109 TS096             -1.6089 -1.6032             -1.6089 -1.6032 TS096 109
110 TS105             -1.6089 -1.6032             -1.6089 -1.6032 TS105 110
111 TS110             -1.6089 -1.6032             -1.6089 -1.6032 TS110 111
112 TS140             -1.6089 -1.6032             -1.6089 -1.6032 TS140 112
113 TS147             -1.6089 -1.6032             -1.6089 -1.6032 TS147 113
114 TS149             -1.6089 -1.6032             -1.6089 -1.6032 TS149 114
115 TS150             -1.6089 -1.6032             -1.6089 -1.6032 TS150 115
116 TS152             -1.6089 -1.6032             -1.6089 -1.6032 TS152 116
117 TS153             -1.6089 -1.6032             -1.6089 -1.6032 TS153 117
118 TS154             -1.6089 -1.6032             -1.6089 -1.6032 TS154 118
119 TS160             -1.6089 -1.6032             -1.6089 -1.6032 TS160 119
120 TS170             -1.6089 -1.6032             -1.6089 -1.6032 TS170 120
121 TS172             -1.6089 -1.6032             -1.6089 -1.6032 TS172 121
122 TS180             -1.6089 -1.6032             -1.6089 -1.6032 TS180 122
123 TS182             -1.6089 -1.6032             -1.6089 -1.6032 TS182 123
124 TS184             -1.6089 -1.6032             -1.6089 -1.6032 TS184 124
125 TS186             -1.6089 -1.6032             -1.6089 -1.6032 TS186 125
126 TS192             -1.6089 -1.6032             -1.6089 -1.6032 TS192 126
127 TS199             -1.6089 -1.6032             -1.6089 -1.6032 TS199 127
128 TS200             -1.6089 -1.6032             -1.6089 -1.6032 TS200 128
129 TS206             -1.6089 -1.6032             -1.6089 -1.6032 TS206 129
130 TS240             -1.6089 -1.6032             -1.6089 -1.6032 TS240 130
131 TS242             -1.6089 -1.6032             -1.6089 -1.6032 TS242 131
132 TS250             -1.6089 -1.6032             -1.5925 -1.6504 TS250 132
133 TS254             -1.6089 -1.6032             -1.6089 -1.6032 TS254 133
134 TS261             -1.6089 -1.6032             -1.6089 -1.6032 TS261 134
135 TS263             -1.6089 -1.6032             -1.6089 -1.6032 TS263 135
136 TS264             -1.6089 -1.6032             -1.6089 -1.6032 TS264 136
137 TS269             -1.6089 -1.6032             -1.6089 -1.6032 TS269 137
138 TS278             -1.6089 -1.6032             -1.6089 -1.6032 TS278 138
139 TS279             -1.6089 -1.6032             -1.6089 -1.6032 TS279 139
140 TS282             -1.6089 -1.6032             -1.6089 -1.6032 TS282 140
141 TS295             -1.6089 -1.6032             -1.6089 -1.6032 TS295 141
142 TS297             -1.6089 -1.6032             -1.6089 -1.6032 TS297 142
143 TS299             -1.6089 -1.6032             -1.6089 -1.6032 TS299 143
144 TS300             -1.6089 -1.6032             -1.6089 -1.6032 TS300 144
145 TS301             -1.6089 -1.6032             -1.6089 -1.6032 TS301 145
146 TS311             -1.6089 -1.6032             -1.6089 -1.6032 TS311 146
147 TS316             -1.6089 -1.6032             -1.6089 -1.6032 TS316 147
148 TS322             -1.6089 -1.6032             -1.6089 -1.6032 TS322 148
149 TS324             -1.6089 -1.6032             -1.6089 -1.6032 TS324 149
150 TS330             -1.6089 -1.6032             -1.6089 -1.6032 TS330 150
151 TS331             -1.6089 -1.6032             -1.6089 -1.6032 TS331 151
152 TS333             -1.6089 -1.6032             -1.6089 -1.6032 TS333 152
153 TS336             -1.6089 -1.6032             -1.6089 -1.6032 TS336 153
154 TS347             -1.6089 -1.6032             -1.6089 -1.6032 TS347 154
155 TS350             -1.6089 -1.6032             -1.6089 -1.6032 TS350 155
156 TS353             -1.6089 -1.6032             -1.6089 -1.6032 TS353 156
157 TS358             -1.6089 -1.6032             -1.6089 -1.6032 TS358 157
158 TS360             -1.6089 -1.6032             -1.6089 -1.6032 TS360 158
159 TS365             -1.6089 -1.6032             -1.6089 -1.6032 TS365 159
160 TS373             -1.6089 -1.6032             -1.6089 -1.6032 TS373 160
161 TS382             -1.6089 -1.6032             -1.6089 -1.6032 TS382 161
162 TS386             -1.6089 -1.6032             -1.6089 -1.6032 TS386 162
163 TS399             -1.6089 -1.6032             -1.6089 -1.6032 TS399 163
164 TS400             -1.6089 -1.6032             -1.6089 -1.6032 TS400 164
165 TS402             -1.6089 -1.6032             -1.6089 -1.6032 TS402 165
166 TS403             -1.6089 -1.6032             -1.6089 -1.6032 TS403 166
167 TS408             -1.6089 -1.6032             -1.6089 -1.6032 TS408 167
168 TS418             -1.6089 -1.6032             -1.6089 -1.6032 TS418 168
169 TS423             -1.6089 -1.6032             -1.6089 -1.6032 TS423 169
170 TS424             -1.6089 -1.6032             -1.6089 -1.6032 TS424 170
171 TS433             -1.6089 -1.6032             -1.6089 -1.6032 TS433 171
172 TS439             -1.6089 -1.6032             -1.6089 -1.6032 TS439 172
173 TS444             -1.6089 -1.6032             -1.6089 -1.6032 TS444 173
174 TS450             -1.6089 -1.6032             -1.6089 -1.6032 TS450 174
175 TS458             -1.6089 -1.6032             -1.6089 -1.6032 TS458 175
176 TS461             -1.6089 -1.6032             -1.6089 -1.6032 TS461 176
177 TS477             -1.6089 -1.6032             -1.6089 -1.6032 TS477 177
178 TS484             -1.6089 -1.6032             -1.6089 -1.6032 TS484 178