T0634

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0634

3N53 from unknown species

Target type: Server only

Target sequence:

>T0634 3N53, unknown species, 140 residues
MSLKKILIIDQQDFSRIELKNFLDSEYLVIESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRIEIHLRTQNYYSDLRKNEGHHHHHH

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: NYSGXRC
PDB ID: 3n53

Jmol of T0634 structure : 3n53

PyMOL of T0634

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0634A1-1273-129
T0634B1-1223-124

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

CheY-related, 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

1w25_A | PyMOL of 1w25 A 2-140

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Response regulator receiver domain (PF00072).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0634 T0634 T0634 T0634
First score First Z-score Best score Best Z-score
1 TS321 95.1610 94.9820 1.0722 1.0837 95.1610 94.9820 1.0722 1.0837 TS321 1
2 TS103 94.8920 94.3550 1.0283 1.0070 94.8920 94.3550 1.0283 1.0070 TS103 2
3 TS215 94.6240 93.7280 0.9845 0.9304 94.6240 93.7280 0.9845 0.9304 TS215 3
4 TS236 94.3550 94.1760 0.9406 0.9851 94.3550 94.1760 0.9406 0.9851 TS236 4
5 TS114 94.3550 94.1760 0.9406 0.9851 94.3550 94.1760 0.9406 0.9851 TS114 5
6 TS094 94.3550 93.4590 0.9406 0.8975 94.6240 93.7280 0.9845 0.9304 TS094 6
7 TS127 94.0860 93.7280 0.8967 0.9304 94.6240 94.2650 0.9845 0.9960 TS127 7
8 TS129 94.0860 92.8320 0.8967 0.8209 94.6240 94.0860 0.9845 0.9741 TS129 8
9 TS088 93.8170 93.2800 0.8528 0.8756 93.8170 93.2800 0.8528 0.8756 TS088 9
10 TS452 93.8170 92.9210 0.8528 0.8317 94.3550 93.6380 0.9406 0.9194 TS452 10
11 TS208 93.8170 92.3840 0.8528 0.7661 95.1610 94.8030 1.0722 1.0618 TS208 11
12 TS002 93.5480 93.1900 0.8089 0.8646 94.8920 93.9960 1.0283 0.9631 TS002 12
13 TS429 93.5480 93.0110 0.8089 0.8427 94.8920 94.5340 1.0283 1.0289 TS429 13
14 TS080 93.5480 93.0110 0.8089 0.8427 94.8920 93.9960 1.0283 0.9631 TS080 14
15 TS214 93.5480 92.8320 0.8089 0.8209 93.5480 92.8320 0.8089 0.8209 TS214 15
16 TS407 93.2800 92.7420 0.7651 0.8099 94.3550 93.4590 0.9406 0.8975 TS407 16
17 TS449 93.2800 92.3840 0.7651 0.7661 93.2800 92.3840 0.7651 0.7661 TS449 17
18 TS453 93.2800 92.3840 0.7651 0.7661 93.2800 92.3840 0.7651 0.7661 TS453 18
19 TS119 93.2800 92.3840 0.7651 0.7661 94.6240 93.7280 0.9845 0.9304 TS119 19
20 TS346 93.2800 92.3840 0.7651 0.7661 93.2800 92.3840 0.7651 0.7661 TS346 20
21 TS420 93.0110 92.2940 0.7212 0.7551 93.0110 92.2940 0.7212 0.7551 TS420 21
22 TS171 93.0110 92.2940 0.7212 0.7551 93.0110 92.2940 0.7212 0.7551 TS171 22
23 TS471 93.0110 92.2940 0.7212 0.7551 93.0110 92.2940 0.7212 0.7551 TS471 23
24 TS361 93.0110 92.1150 0.7212 0.7332 93.2800 92.7420 0.7651 0.8099 TS361 24
25 TS345 92.7420 91.1290 0.6773 0.6127 93.0110 92.2940 0.7212 0.7551 TS345 25
26 TS366 92.4730 91.9350 0.6334 0.7112 92.4730 91.9350 0.6334 0.7112 TS366 26
27 TS063 92.4730 91.9350 0.6334 0.7112 92.4730 91.9350 0.6334 0.7112 TS063 27
28 TS328 92.4730 91.7560 0.6334 0.6893 92.4730 91.7560 0.6334 0.6893 TS328 28
29 TS047 92.2040 91.1290 0.5894 0.6127 92.2040 91.1290 0.5894 0.6127 TS047 29
30 TS028 91.9350 91.3980 0.5455 0.6456 91.9350 91.3980 0.5455 0.6456 TS028 30
31 TS166 91.9350 91.2190 0.5455 0.6237 91.9350 91.2190 0.5455 0.6237 TS166 31
32 TS056 91.9350 90.6810 0.5455 0.5579 93.5480 91.0390 0.8089 0.6017 TS056 32
33 TS104 91.9350 90.5020 0.5455 0.5361 91.9350 90.5020 0.5455 0.5361 TS104 33
34 TS228 91.9350 90.1430 0.5455 0.4922 92.7420 90.7710 0.6773 0.5689 TS228 34
35 TS174 91.6670 91.4870 0.5018 0.6565 91.6670 91.4870 0.5018 0.6565 TS174 35
36 TS291 91.6670 91.1290 0.5018 0.6127 93.0110 92.2940 0.7212 0.7551 TS291 36
37 TS319 91.3980 91.0390 0.4579 0.6017 91.9350 91.7560 0.5455 0.6893 TS319 37
38 TS273 91.3980 91.0390 0.4579 0.6017 91.9350 91.7560 0.5455 0.6893 TS273 38
39 TS001 91.3980 91.0390 0.4579 0.6017 91.3980 91.0390 0.4579 0.6017 TS001 39
40 TS102 91.3980 90.8600 0.4579 0.5798 91.3980 90.8600 0.4579 0.5798 TS102 40
41 TS419 91.1290 90.9500 0.4140 0.5908 91.6670 91.1290 0.5018 0.6127 TS419 41
42 TS276 91.1290 89.8750 0.4140 0.4594 93.2800 92.5630 0.7651 0.7880 TS276 42
43 TS077 91.1290 89.8750 0.4140 0.4594 93.2800 92.5630 0.7651 0.7880 TS077 43
44 TS286 91.1290 89.8750 0.4140 0.4594 93.2800 92.5630 0.7651 0.7880 TS286 44
45 TS409 90.8600 90.6810 0.3700 0.5579 93.8170 93.2800 0.8528 0.8756 TS409 45
46 TS428 90.8600 90.3230 0.3700 0.5142 91.3980 90.8600 0.4579 0.5798 TS428 46
47 TS173 90.8600 89.2470 0.3700 0.3827 91.3980 91.0390 0.4579 0.6017 TS173 47
48 TS481 90.8600 86.5590 0.3700 0.0541 91.9350 91.0390 0.5455 0.6017 TS481 48
49 TS035 90.5910 90.0540 0.3261 0.4813 90.5910 90.0540 0.3261 0.4813 TS035 49
50 TS380 90.5910 90.0540 0.3261 0.4813 90.5910 90.0540 0.3261 0.4813 TS380 50
51 TS037 90.5910 90.0540 0.3261 0.4813 93.0110 92.2940 0.7212 0.7551 TS037 51
52 TS314 90.5910 90.0540 0.3261 0.4813 90.5910 90.0540 0.3261 0.4813 TS314 52
53 TS457 89.7850 89.0680 0.1945 0.3608 89.7850 89.0680 0.1945 0.3608 TS457 53
54 TS113 89.7850 88.5300 0.1945 0.2950 94.3550 93.4590 0.9406 0.8975 TS113 54
55 TS436 89.7850 87.4550 0.1945 0.1636 91.9350 90.6810 0.5455 0.5579 TS436 55
56 TS470 89.7850 84.7670 0.1945 -0.1649 93.0110 92.2940 0.7212 0.7551 TS470 56
57 TS476 89.5160 88.6200 0.1506 0.3060 91.9350 91.3980 0.5455 0.6456 TS476 57
58 TS302 89.2470 87.2760 0.1067 0.1417 92.7420 92.3840 0.6773 0.7661 TS302 58
59 TS142 89.2470 87.2760 0.1067 0.1417 92.7420 92.3840 0.6773 0.7661 TS142 59
60 TS220 89.2470 87.2760 0.1067 0.1417 89.2470 87.3660 0.1067 0.1527 TS220 60
61 TS447 89.2470 87.2760 0.1067 0.1417 89.2470 87.3660 0.1067 0.1527 TS447 61
62 TS055 89.2470 85.8420 0.1067 -0.0335 90.3230 87.0970 0.2824 0.1199 TS055 62
63 TS253 87.9030 87.3660 -0.1127 0.1527 89.2470 87.3660 0.1067 0.1527 TS253 63
64 TS165 87.9030 87.0070 -0.1127 0.1089 87.9030 87.0070 -0.1127 0.1089 TS165 64
65 TS250 87.9030 85.0360 -0.1127 -0.1320 87.9030 85.0360 -0.1127 -0.1320 TS250 65
66 TS218 87.3660 85.0360 -0.2004 -0.1320 87.9030 85.3940 -0.1127 -0.0883 TS218 66
67 TS275 87.3660 80.0180 -0.2004 -0.7454 91.9350 91.7560 0.5455 0.6893 TS275 67
68 TS207 87.0970 80.8240 -0.2443 -0.6469 93.8170 93.2800 0.8528 0.8756 TS207 68
69 TS117 86.5590 85.8420 -0.3321 -0.0335 86.8280 86.1110 -0.2882 -0.0007 TS117 69
70 TS026 86.2900 80.5560 -0.3760 -0.6796 88.9780 88.0820 0.0628 0.2403 TS026 70
71 TS307 86.0220 84.9460 -0.4198 -0.1430 90.0540 89.5160 0.2385 0.4155 TS307 71
72 TS074 85.7530 83.9610 -0.4637 -0.2634 85.7530 83.9610 -0.4637 -0.2634 TS074 72
73 TS304 84.9460 81.3620 -0.5955 -0.5811 94.3550 93.6380 0.9406 0.9194 TS304 73
74 TS018 83.6020 81.2720 -0.8149 -0.5921 91.6670 91.1290 0.5018 0.6127 TS018 74
75 TS296 82.5270 79.6590 -0.9904 -0.7893 87.0970 85.2150 -0.2443 -0.1102 TS296 75
76 TS418 80.1080 70.7890 -1.3853 -1.8735 85.4840 83.8710 -0.5076 -0.2744 TS418 76
77 TS435 79.5700 73.6560 -1.4731 -1.5230 87.9030 83.6020 -0.1127 -0.3073 TS435 77
78 TS245 79.0320 74.7310 -1.5609 -1.3916 79.0320 74.7310 -1.5609 -1.3916 TS245 78
79 TS244 79.0320 74.1940 -1.5609 -1.4573 79.0320 74.1940 -1.5609 -1.4573 TS244 79
80 TS213 78.7630 69.9820 -1.6049 -1.9721 91.1290 90.5910 0.4140 0.5469 TS213 80
81 AL285 77.4190 68.2800 -1.8243 -2.1801 78.4950 72.9390 -1.6486 -1.6107 AL285 81
82 TS248 77.4190 65.2330 -1.8243 -2.5526 77.6880 65.2330 -1.7804 -2.5526 TS248 82
83 AL396 77.1510 67.8320 -1.8680 -2.2349 90.8600 90.3230 0.3700 0.5142 AL396 83
84 TS289 61.2900 54.6590 -4.4574 -3.8450 61.2900 54.6590 -4.4574 -3.8450 TS289 84
85 TS355 35.0430 32.3360 -8.7424 -6.5736 51.0750 36.2010 -6.1251 -6.1012 TS355 85
86 TS257 34.9460 29.6590 -8.7582 -6.9008 37.3660 29.6590 -8.3631 -6.9008 TS257 86
87 TS014 34.6770 24.1040 -8.8021 -7.5798 45.9680 38.2620 -6.9588 -5.8492 TS014 87
88 TS264 30.3420 27.2790 -9.5098 -7.1917 55.6450 47.9390 -5.3790 -4.6664 TS264 88
89 TS350 29.3010 27.7780 -9.6798 -7.1307 34.1400 30.4660 -8.8898 -6.8021 TS350 89
90 TS229 22.3120 17.6520 -10.8208 -8.3684 22.8490 18.3690 -10.7331 -8.2808 TS229 90
91 RANDOM 21.61 18.31 -10.9354 -8.2880 21.61 18.31 -10.9354 -8.2880 RANDOM 91
92 TS362 13.9780 12.0070 -12.1814 -9.0584 16.9350 15.5020 -11.6986 -8.6312 TS362 92
93 TS009             -10.9354 -8.2880             -10.9354 -8.2880 TS009 93
94 TS016             -10.9354 -8.2880             -10.9354 -8.2880 TS016 94
95 TS020             -10.9354 -8.2880             -10.9354 -8.2880 TS020 95
96 TS029             -10.9354 -8.2880             -10.9354 -8.2880 TS029 96
97 TS033             -10.9354 -8.2880             -10.9354 -8.2880 TS033 97
98 TS039             -10.9354 -8.2880             -10.9354 -8.2880 TS039 98
99 TS042             -10.9354 -8.2880             -10.9354 -8.2880 TS042 99
100 TS044             -10.9354 -8.2880             -10.9354 -8.2880 TS044 100
101 TS045             -10.9354 -8.2880             -10.9354 -8.2880 TS045 101
102 TS060             -10.9354 -8.2880             -10.9354 -8.2880 TS060 102
103 TS061             -10.9354 -8.2880             -10.9354 -8.2880 TS061 103
104 TS075             -10.9354 -8.2880             -10.9354 -8.2880 TS075 104
105 TS083             -10.9354 -8.2880             -10.9354 -8.2880 TS083 105
106 TS084             -10.9354 -8.2880             -10.9354 -8.2880 TS084 106
107 TS086             -10.9354 -8.2880             -10.9354 -8.2880 TS086 107
108 TS096             -10.9354 -8.2880             -10.9354 -8.2880 TS096 108
109 TS105             -10.9354 -8.2880             -10.9354 -8.2880 TS105 109
110 TS110             -10.9354 -8.2880             -10.9354 -8.2880 TS110 110
111 TS140             -10.9354 -8.2880             -10.9354 -8.2880 TS140 111
112 TS147             -10.9354 -8.2880             -10.9354 -8.2880 TS147 112
113 TS149             -10.9354 -8.2880             -10.9354 -8.2880 TS149 113
114 TS150             -10.9354 -8.2880             -10.9354 -8.2880 TS150 114
115 TS152             -10.9354 -8.2880             -10.9354 -8.2880 TS152 115
116 TS153             -10.9354 -8.2880             -10.9354 -8.2880 TS153 116
117 TS154             -10.9354 -8.2880             -10.9354 -8.2880 TS154 117
118 TS160             -10.9354 -8.2880             -10.9354 -8.2880 TS160 118
119 TS170             -10.9354 -8.2880             -10.9354 -8.2880 TS170 119
120 TS172             -10.9354 -8.2880             -10.9354 -8.2880 TS172 120
121 TS178             -10.9354 -8.2880             -10.9354 -8.2880 TS178 121
122 TS180             -10.9354 -8.2880             -10.9354 -8.2880 TS180 122
123 TS182             -10.9354 -8.2880             -10.9354 -8.2880 TS182 123
124 TS184             -10.9354 -8.2880             -10.9354 -8.2880 TS184 124
125 TS186             -10.9354 -8.2880             -10.9354 -8.2880 TS186 125
126 TS189             -10.9354 -8.2880             -10.9354 -8.2880 TS189 126
127 TS192             -10.9354 -8.2880             -10.9354 -8.2880 TS192 127
128 TS199             -10.9354 -8.2880             -10.9354 -8.2880 TS199 128
129 TS200             -10.9354 -8.2880             -10.9354 -8.2880 TS200 129
130 TS206             -10.9354 -8.2880             -10.9354 -8.2880 TS206 130
131 TS240             -10.9354 -8.2880             -10.9354 -8.2880 TS240 131
132 TS242             -10.9354 -8.2880             -10.9354 -8.2880 TS242 132
133 TS254             -10.9354 -8.2880             -10.9354 -8.2880 TS254 133
134 TS261             -10.9354 -8.2880             -10.9354 -8.2880 TS261 134
135 TS263             -10.9354 -8.2880             -10.9354 -8.2880 TS263 135
136 TS269             -10.9354 -8.2880             -10.9354 -8.2880 TS269 136
137 TS278             -10.9354 -8.2880             -10.9354 -8.2880 TS278 137
138 TS279             -10.9354 -8.2880             -10.9354 -8.2880 TS279 138
139 TS282             -10.9354 -8.2880             -10.9354 -8.2880 TS282 139
140 TS295             -10.9354 -8.2880             -10.9354 -8.2880 TS295 140
141 TS297             -10.9354 -8.2880             -10.9354 -8.2880 TS297 141
142 TS299             -10.9354 -8.2880             -10.9354 -8.2880 TS299 142
143 TS300             -10.9354 -8.2880             -10.9354 -8.2880 TS300 143
144 TS301             -10.9354 -8.2880             -10.9354 -8.2880 TS301 144
145 TS311             -10.9354 -8.2880             -10.9354 -8.2880 TS311 145
146 TS316             -10.9354 -8.2880             -10.9354 -8.2880 TS316 146
147 TS322             -10.9354 -8.2880             -10.9354 -8.2880 TS322 147
148 TS324             -10.9354 -8.2880             -10.9354 -8.2880 TS324 148
149 TS330             -10.9354 -8.2880             -10.9354 -8.2880 TS330 149
150 TS331             -10.9354 -8.2880             -10.9354 -8.2880 TS331 150
151 TS333             -10.9354 -8.2880             -10.9354 -8.2880 TS333 151
152 TS336             -10.9354 -8.2880             -10.9354 -8.2880 TS336 152
153 TS347             -10.9354 -8.2880             -10.9354 -8.2880 TS347 153
154 TS353             -10.9354 -8.2880             -10.9354 -8.2880 TS353 154
155 TS358             -10.9354 -8.2880             -10.9354 -8.2880 TS358 155
156 TS360             -10.9354 -8.2880             -10.9354 -8.2880 TS360 156
157 TS365             -10.9354 -8.2880             -10.9354 -8.2880 TS365 157
158 TS373             -10.9354 -8.2880             -10.9354 -8.2880 TS373 158
159 TS382             -10.9354 -8.2880             -10.9354 -8.2880 TS382 159
160 TS386             -10.9354 -8.2880             -10.9354 -8.2880 TS386 160
161 TS391             -10.9354 -8.2880             -10.9354 -8.2880 TS391 161
162 TS395             -10.9354 -8.2880             -10.9354 -8.2880 TS395 162
163 TS399             -10.9354 -8.2880             -10.9354 -8.2880 TS399 163
164 TS400             -10.9354 -8.2880             -10.9354 -8.2880 TS400 164
165 TS402             -10.9354 -8.2880             -10.9354 -8.2880 TS402 165
166 TS403             -10.9354 -8.2880             -10.9354 -8.2880 TS403 166
167 TS408             -10.9354 -8.2880             -10.9354 -8.2880 TS408 167
168 TS423             -10.9354 -8.2880             -10.9354 -8.2880 TS423 168
169 TS424             -10.9354 -8.2880             -10.9354 -8.2880 TS424 169
170 TS433             -10.9354 -8.2880             -10.9354 -8.2880 TS433 170
171 TS439             -10.9354 -8.2880             -10.9354 -8.2880 TS439 171
172 TS444             -10.9354 -8.2880             -10.9354 -8.2880 TS444 172
173 TS450             -10.9354 -8.2880             -10.9354 -8.2880 TS450 173
174 TS458             -10.9354 -8.2880             -10.9354 -8.2880 TS458 174
175 TS461             -10.9354 -8.2880             -10.9354 -8.2880 TS461 175
176 TS477             -10.9354 -8.2880             -10.9354 -8.2880 TS477 176
177 TS484             -10.9354 -8.2880             -10.9354 -8.2880 TS484 177
178 TS490             -10.9354 -8.2880             -10.9354 -8.2880 TS490 178