T0578

Targets
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531 532 533 534
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539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
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563 564 565 566
567 568 569 570
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579 580 581 582
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639 640 641 642
643      

T0578

3NAT from Enterococcus faecalis

Target type: Human/Server

Target sequence:

>T0578 3NAT, Enterococcus faecalis, 170 residues
SNAMKKATMLTYLEEQLEKHLGDYEVGLDWDRKNHTIEVIVRLYAENNEQVAIDDVDGTLSEEEFIEFEDGLLFYNPQKSVVDDEEYLVTIPYEGKKGLRKAVLDGFIHYLKVVLDEGQSDLLDFLSDETAEVFELHWEPADFEAMIKKVAETEKEQWIAYPSY

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: MCSG
PDB ID: 3nat

Jmol of T0578 structure : 3nat

PyMOL of T0578

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0578A-2-1601-163
T0578B-2-1591-162

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Two layers, a/b, four strands forms a antiparallel sheet, order 1234

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: FM  alignment.

Closest templates:

Template manually selected by shuoyong:

No good template found for now, needs more study

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

DUF3013: Protein of unknown function (PF11217).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0578 T0578 T0578 T0578
First score First Z-score Best score Best Z-score
1 TS096 30.1790 22.7980 2.3817 1.7656 30.1790 22.7980 2.3817 1.7656 TS096 1
2 TS380 29.6430 20.4170 2.2537 1.0530 29.6430 20.4170 2.2537 1.0530 TS380 2
3 TS386 28.2140 21.7860 1.9123 1.4627 28.2140 21.7860 1.9123 1.4627 TS386 3
4 TS119 28.2140 19.2860 1.9123 0.7145 28.2140 22.2020 1.9123 1.5872 TS119 4
5 TS215 28.0360 22.0830 1.8698 1.5516 28.0360 22.0830 1.8698 1.5516 TS215 5
6 TS395 27.8570 25.2380 1.8271 2.4958 28.7500 27.0830 2.0404 3.0479 TS395 6
7 TS094 27.5000 23.3930 1.7418 1.9436 29.6430 23.3930 2.2537 1.9436 TS094 7
8 TS240 27.5000 23.3930 1.7418 1.9436 27.5000 23.3930 1.7418 1.9436 TS240 8
9 TS470 27.5000 23.3930 1.7418 1.9436 27.5000 23.3930 1.7418 1.9436 TS470 9
10 TS407 27.5000 23.3930 1.7418 1.9436 29.6430 23.3930 2.2537 1.9436 TS407 10
11 TS428 27.5000 23.3930 1.7418 1.9436 35.1790 30.1790 3.5761 3.9745 TS428 11
12 TS192 27.5000 23.3930 1.7418 1.9436 27.5000 23.3930 1.7418 1.9436 TS192 12
13 TS047 27.5000 22.9760 1.7418 1.8188 27.5000 22.9760 1.7418 1.8188 TS047 13
14 TS295 27.3210 23.3930 1.6990 1.9436 27.3210 23.3930 1.6990 1.9436 TS295 14
15 TS113 27.1430 22.6190 1.6565 1.7120 29.6430 22.6190 2.2537 1.7120 TS113 15
16 TS037 27.1430 21.6070 1.6565 1.4091 29.8210 21.6070 2.2962 1.4091 TS037 16
17 TS127 26.6070 19.8210 1.5285 0.8746 26.6070 19.8210 1.5285 0.8746 TS127 17
18 TS314 26.2500 24.2260 1.4432 2.1929 28.7500 24.7020 2.0404 2.3354 TS314 18
19 TS361 26.0710 21.9050 1.4004 1.4983 26.0710 22.8570 1.4004 1.7832 TS361 19
20 TS424 25.7140 19.4640 1.3151 0.7678 25.7140 20.9520 1.3151 1.2131 TS424 20
21 TS484 25.5360 24.2260 1.2726 2.1929 25.5360 24.2260 1.2726 2.1929 TS484 21
22 TS402 25.5360 21.9640 1.2726 1.5160 25.5360 22.5000 1.2726 1.6764 TS402 22
23 TS366 25.3570 23.0950 1.2299 1.8544 25.3570 23.3930 1.2299 1.9436 TS366 23
24 TS016 25.3570 20.4760 1.2299 1.0707 25.7140 22.7380 1.3151 1.7476 TS016 24
25 TS088 25.1790 22.0240 1.1873 1.5339 25.3570 22.1430 1.2299 1.5695 TS088 25
26 TS490 25.1790 17.6790 1.1873 0.2336 27.3210 23.2140 1.6990 1.8901 TS490 26
27 TS399 25.0000 22.7380 1.1446 1.7476 26.0710 24.1070 1.4004 2.1573 TS399 27
28 TS147 24.8210 19.3450 1.1018 0.7322 25.1790 20.4170 1.1873 1.0530 TS147 28
29 TS316 24.2860 22.2020 0.9740 1.5872 24.2860 22.2020 0.9740 1.5872 TS316 29
30 TS429 24.2860 16.2500 0.9740 -0.1941 24.2860 18.3330 0.9740 0.4293 TS429 30
31 TS276 24.1070 14.2260 0.9313 -0.7998 24.1070 15.9520 0.9313 -0.2832 TS276 31
32 TS286 24.1070 14.2260 0.9313 -0.7998 24.1070 15.9520 0.9313 -0.2832 TS286 32
33 TS110 24.1070 14.2260 0.9313 -0.7998 27.5000 23.3930 1.7418 1.9436 TS110 33
34 TS080 23.9290 19.1670 0.8887 0.6789 27.3210 22.3210 1.6990 1.6228 TS080 34
35 TS002 23.9290 19.1670 0.8887 0.6789 27.3210 22.3210 1.6990 1.6228 TS002 35
36 TS033 23.7500 19.8810 0.8460 0.8926 23.7500 19.8810 0.8460 0.8926 TS033 36
37 TS083 23.5710 21.3100 0.8032 1.3202 23.5710 21.3100 0.8032 1.3202 TS083 37
38 TS299 23.5710 19.5240 0.8032 0.7857 26.4290 22.0240 1.4859 1.5339 TS299 38
39 TS253 23.5710 19.1070 0.8032 0.6610 23.5710 19.1070 0.8032 0.6610 TS253 39
40 TS321 23.2140 20.0000 0.7179 0.9282 24.6430 22.5600 1.0593 1.6943 TS321 40
41 TS199 23.2140 20.0000 0.7179 0.9282 23.2140 20.0000 0.7179 0.9282 TS199 41
42 TS423 23.0360 19.7020 0.6754 0.8390 23.0360 19.7020 0.6754 0.8390 TS423 42
43 TS153 22.8570 20.5360 0.6327 1.0886 22.8570 20.5360 0.6327 1.0886 TS153 43
44 TS481 22.8570 16.0120 0.6327 -0.2653 23.5710 19.5830 0.8032 0.8034 TS481 44
45 TS182 22.6790 18.8100 0.5901 0.5721 30.1790 25.0600 2.3817 2.4425 TS182 45
46 TS365 22.6790 17.0830 0.5901 0.0552 25.7140 21.5480 1.3151 1.3915 TS365 46
47 TS400 22.5000 19.1670 0.5474 0.6789 29.8210 23.6310 2.2962 2.0149 TS400 47
48 TS435 22.5000 18.9290 0.5474 0.6077 24.1070 21.2500 0.9313 1.3023 TS435 48
49 TS061 22.5000 15.8330 0.5474 -0.3189 22.5000 15.8330 0.5474 -0.3189 TS061 49
50 TS360 22.3210 18.4520 0.5046 0.4649 22.3210 18.4520 0.5046 0.4649 TS360 50
51 TS055 22.3210 17.6790 0.5046 0.2336 22.3210 19.9400 0.5046 0.9102 TS055 51
52 TS300 22.3210 17.2620 0.5046 0.1088 22.8570 17.6790 0.6327 0.2336 TS300 52
53 TS077 22.3210 15.5950 0.5046 -0.3901 22.3210 18.1550 0.5046 0.3760 TS077 53
54 TS042 22.1430 16.3690 0.4621 -0.1584 23.0360 18.3930 0.6754 0.4473 TS042 54
55 TS186 21.9640 18.8690 0.4194 0.5897 23.3930 18.8690 0.7607 0.5897 TS186 55
56 TS291 21.9640 15.0600 0.4194 -0.5502 21.9640 17.1430 0.4194 0.0732 TS291 56
57 TS014 21.7860 19.6430 0.3768 0.8214 22.5000 21.6670 0.5474 1.4271 TS014 57
58 TS214 21.7860 18.6900 0.3768 0.5362 23.3930 18.6900 0.7607 0.5362 TS214 58
59 TS373 21.6070 18.8690 0.3341 0.5897 21.6070 18.8690 0.3341 0.5897 TS373 59
60 TS114 21.4290 17.4400 0.2916 0.1621 21.4290 20.1790 0.2916 0.9818 TS114 60
61 TS063 21.2500 19.7020 0.2488 0.8390 23.3930 19.8210 0.7607 0.8746 TS063 61
62 TS457 21.2500 17.3210 0.2488 0.1265 25.0000 23.0360 1.1446 1.8368 TS457 62
63 TS419 21.2500 17.3210 0.2488 0.1265 27.5000 23.3930 1.7418 1.9436 TS419 63
64 TS382 20.8930 17.7380 0.1635 0.2513 22.1430 17.7380 0.4621 0.2513 TS382 64
65 TS172 20.7140 14.7620 0.1208 -0.6394 29.1070 23.7500 2.1257 2.0505 TS172 65
66 TS236 20.5360 18.4520 0.0782 0.4649 22.8570 19.1670 0.6327 0.6789 TS236 66
67 TS297 20.3570 17.3210 0.0355 0.1265 25.5360 18.8690 1.2726 0.5897 TS297 67
68 TS350 20.1790 17.2020 -0.0070 0.0908 22.3210 20.4170 0.5046 1.0530 TS350 68
69 TS170 20.0000 17.2020 -0.0498 0.0908 22.6790 17.2020 0.5901 0.0908 TS170 69
70 TS450 20.0000 15.9520 -0.0498 -0.2832 20.0000 15.9520 -0.0498 -0.2832 TS450 70
71 TS355 19.8210 17.1430 -0.0926 0.0732 23.5710 20.5950 0.8032 1.1063 TS355 71
72 TS408 19.8210 17.0830 -0.0926 0.0552 31.0710 25.8330 2.5948 2.6738 TS408 72
73 TS045 19.8210 16.2500 -0.0926 -0.1941 19.8210 16.2500 -0.0926 -0.1941 TS045 73
74 TS174 19.8210 16.1310 -0.0926 -0.2297 26.6070 24.7620 1.5285 2.3533 TS174 74
75 TS075 19.6430 18.0950 -0.1351 0.3581 22.5000 20.2380 0.5474 0.9994 TS075 75
76 TS324 19.6430 17.6790 -0.1351 0.2336 19.8210 17.6790 -0.0926 0.2336 TS324 76
77 TS458 19.6430 15.8330 -0.1351 -0.3189 23.3930 21.3100 0.7607 1.3202 TS458 77
78 TS452 19.4640 17.3210 -0.1778 0.1265 19.4640 17.7380 -0.1778 0.2513 TS452 78
79 TS129 19.4640 13.9880 -0.1778 -0.8710 19.4640 13.9880 -0.1778 -0.8710 TS129 79
80 TS282 19.2860 17.7980 -0.2204 0.2692 28.0360 23.3930 1.8698 1.9436 TS282 80
81 TS345 19.1070 17.7380 -0.2631 0.2513 21.0710 18.1550 0.2060 0.3760 TS345 81
82 TS102 19.1070 16.6070 -0.2631 -0.0872 20.7140 16.6070 0.1208 -0.0872 TS102 82
83 TS084 19.1070 16.1900 -0.2631 -0.2120 22.6790 17.7980 0.5901 0.2692 TS084 83
84 TS353 19.1070 15.7740 -0.2631 -0.3365 19.1070 15.7740 -0.2631 -0.3365 TS353 84
85 TS104 18.9290 18.2140 -0.3056 0.3937 25.1790 21.4880 1.1873 1.3735 TS104 85
86 TS307 18.7500 17.6790 -0.3484 0.2336 18.7500 17.7380 -0.3484 0.2513 TS307 86
87 TS245 18.7500 17.3810 -0.3484 0.1444 18.7500 17.3810 -0.3484 0.1444 TS245 87
88 TS242 18.7500 16.7260 -0.3484 -0.0516 19.1070 18.2740 -0.2631 0.4117 TS242 88
89 TS319 18.7500 16.0120 -0.3484 -0.2653 18.7500 16.8450 -0.3484 -0.0160 TS319 89
90 TS200 18.7500 15.2980 -0.3484 -0.4790 25.5360 21.1310 1.2726 1.2667 TS200 90
91 TS166 18.5710 17.1430 -0.3912 0.0732 23.0360 21.0120 0.6754 1.2311 TS166 91
92 TS418 18.5710 16.3100 -0.3912 -0.1761 23.9290 21.5480 0.8887 1.3915 TS418 92
93 TS244 18.3930 15.2980 -0.4337 -0.4790 18.3930 15.2980 -0.4337 -0.4790 TS244 93
94 TS207 17.8570 14.1670 -0.5617 -0.8174 17.8570 14.1670 -0.5617 -0.8174 TS207 94
95 TS149 17.6790 16.5480 -0.6042 -0.1049 17.6790 16.5480 -0.6042 -0.1049 TS149 95
96 TS171 17.6790 14.5830 -0.6042 -0.6929 17.6790 14.5830 -0.6042 -0.6929 TS171 96
97 TS476 17.6790 13.8690 -0.6042 -0.9066 17.6790 13.8690 -0.6042 -0.9066 TS476 97
98 TS403 17.3210 16.0120 -0.6898 -0.2653 17.3210 16.0710 -0.6898 -0.2476 TS403 98
99 TS173 17.3210 15.8930 -0.6898 -0.3009 18.7500 16.4290 -0.3484 -0.1405 TS173 99
100 TS208 17.3210 15.5950 -0.6898 -0.3901 17.3210 15.5950 -0.6898 -0.3901 TS208 100
101 TS273 17.1430 15.2380 -0.7323 -0.4969 18.7500 16.8450 -0.3484 -0.0160 TS273 101
102 TS001 17.1430 15.2380 -0.7323 -0.4969 18.7500 16.8450 -0.3484 -0.0160 TS001 102
103 TS296 17.1430 15.2380 -0.7323 -0.4969 18.7500 16.8450 -0.3484 -0.0160 TS296 103
104 TS328 17.1430 15.1790 -0.7323 -0.5146 17.1430 15.1790 -0.7323 -0.5146 TS328 104
105 TS275 16.9640 15.8330 -0.7750 -0.3189 20.7140 16.7860 0.1208 -0.0337 TS275 105
106 TS257 16.8270 15.2240 -0.8078 -0.5011 20.1790 18.7500 -0.0070 0.5541 TS257 106
107 TS018 16.7860 15.9520 -0.8176 -0.2832 17.1430 15.9520 -0.7323 -0.2832 TS018 107
108 TS444 16.7860 15.1190 -0.8176 -0.5325 16.7860 15.1190 -0.8176 -0.5325 TS444 108
109 TS165 16.6070 16.3690 -0.8603 -0.1584 20.7140 18.6900 0.1208 0.5362 TS165 109
110 TS026 16.6070 15.5360 -0.8603 -0.4077 21.6350 19.9400 0.3408 0.9102 TS026 110
111 TS264 16.2500 15.8930 -0.9456 -0.3009 16.9640 15.8930 -0.7750 -0.3009 TS264 111
112 TS391 16.0710 14.2860 -0.9884 -0.7818 16.0710 14.2860 -0.9884 -0.7818 TS391 112
113 TS218 16.0710 13.5710 -0.9884 -0.9958 16.0710 14.0480 -0.9884 -0.8531 TS218 113
114 TS304 15.8930 12.5600 -1.0309 -1.2984 18.7500 14.8210 -0.3484 -0.6217 TS304 114
115 RANDOM 15.77 13.53 -1.0603 -1.0081 15.77 13.53 -1.0603 -1.0081 RANDOM 115
116 TS220 15.7140 15.5950 -1.0736 -0.3901 22.5000 16.9050 0.5474 0.0020 TS220 116
117 TS447 15.7140 15.5950 -1.0736 -0.3901 22.5000 16.9050 0.5474 0.0020 TS447 117
118 TS409 15.7140 15.1790 -1.0736 -0.5146 24.4640 19.1070 1.0165 0.6610 TS409 118
119 TS311 15.7140 12.2620 -1.0736 -1.3876 15.7140 12.5600 -1.0736 -1.2984 TS311 119
120 TS103 15.7140 11.1900 -1.0736 -1.7084 19.2860 14.7620 -0.2204 -0.6394 TS103 120
121 TS477 15.5360 14.2260 -1.1162 -0.7998 24.1070 16.6070 0.9313 -0.0872 TS477 121
122 TS056 15.5360 13.7500 -1.1162 -0.9422 16.0710 13.9290 -0.9884 -0.8887 TS056 122
123 TS302 15.5360 12.5600 -1.1162 -1.2984 15.7140 15.5950 -1.0736 -0.3901 TS302 123
124 TS142 15.5360 12.5600 -1.1162 -1.2984 15.7140 15.5950 -1.0736 -0.3901 TS142 124
125 TS020 15.3570 14.7620 -1.1589 -0.6394 20.1790 15.7740 -0.0070 -0.3365 TS020 125
126 TS289 15.3570 14.1670 -1.1589 -0.8174 15.3570 14.1670 -1.1589 -0.8174 TS289 126
127 TS333 15.3570 13.3330 -1.1589 -1.0670 16.6070 15.7740 -0.8603 -0.3365 TS333 127
128 TS029 15.1790 13.2740 -1.2014 -1.0847 17.8570 15.2380 -0.5617 -0.4969 TS029 128
129 TS028 14.8210 14.0480 -1.2870 -0.8531 16.0710 14.1670 -0.9884 -0.8174 TS028 129
130 TS213 14.8210 13.0360 -1.2870 -1.1559 21.6070 21.2500 0.3341 1.3023 TS213 130
131 TS248 14.6430 13.5710 -1.3295 -0.9958 15.5360 13.7500 -1.1162 -0.9422 TS248 131
132 TS420 14.1070 11.6670 -1.4575 -1.5656 14.1070 11.6670 -1.4575 -1.5656 TS420 132
133 AL396 13.9290 12.3810 -1.5000 -1.3519 17.5000 15.8330 -0.6470 -0.3189 AL396 133
134 TS206 13.9290 12.3810 -1.5000 -1.3519 13.9290 12.3810 -1.5000 -1.3519 TS206 134
135 TS471 13.9290 11.5480 -1.5000 -1.6012 13.9290 11.5480 -1.5000 -1.6012 TS471 135
136 TS278 13.7500 11.3100 -1.5428 -1.6725 13.7500 11.3100 -1.5428 -1.6725 TS278 136
137 TS117 13.3930 13.0360 -1.6281 -1.1559 20.3570 17.1430 0.0355 0.0732 TS117 137
138 TS449 12.8570 10.3570 -1.7561 -1.9577 12.8570 10.3570 -1.7561 -1.9577 TS449 138
139 TS453 12.8570 10.3570 -1.7561 -1.9577 12.8570 10.3570 -1.7561 -1.9577 TS453 139
140 TS346 12.8570 10.3570 -1.7561 -1.9577 12.8570 10.3570 -1.7561 -1.9577 TS346 140
141 TS229 12.5000 11.4290 -1.8414 -1.6368 15.2240 14.1670 -1.1907 -0.8174 TS229 141
142 TS336 12.1430 9.8810 -1.9267 -2.1001 12.1430 9.8810 -1.9267 -2.1001 TS336 142
143 TS301 11.6990 10.2560 -2.0327 -1.9879 12.1430 10.7740 -1.9267 -1.8329 TS301 143
144 TS436 6.2500 5.6550 -3.3344 -3.3648 6.2500 5.6550 -3.3344 -3.3648 TS436 144
145 AL285             -1.0603 -1.0081             -1.0603 -1.0081 AL285 145
146 TS009             -1.0603 -1.0081             -1.0603 -1.0081 TS009 146
147 TS035             -1.0603 -1.0081             -1.0603 -1.0081 TS035 147
148 TS039             -1.0603 -1.0081             -1.0603 -1.0081 TS039 148
149 TS044             -1.0603 -1.0081             -1.0603 -1.0081 TS044 149
150 TS060             -1.0603 -1.0081             -1.0603 -1.0081 TS060 150
151 TS074             -1.0603 -1.0081             -1.0603 -1.0081 TS074 151
152 TS086             -1.0603 -1.0081             -1.0603 -1.0081 TS086 152
153 TS105             -1.0603 -1.0081             -1.0603 -1.0081 TS105 153
154 TS140             -1.0603 -1.0081             -1.0603 -1.0081 TS140 154
155 TS150             -1.0603 -1.0081             -1.0603 -1.0081 TS150 155
156 TS152             -1.0603 -1.0081             -1.0603 -1.0081 TS152 156
157 TS154             -1.0603 -1.0081             -1.0603 -1.0081 TS154 157
158 TS160             -1.0603 -1.0081             -1.0603 -1.0081 TS160 158
159 TS178             -1.0603 -1.0081             -1.0603 -1.0081 TS178 159
160 TS180             -1.0603 -1.0081             -1.0603 -1.0081 TS180 160
161 TS184             -1.0603 -1.0081             -1.0603 -1.0081 TS184 161
162 TS189             -1.0603 -1.0081             -1.0603 -1.0081 TS189 162
163 TS228             -1.0603 -1.0081             -1.0603 -1.0081 TS228 163
164 TS250             -1.0603 -1.0081             -1.4148 -1.3343 TS250 164
165 TS254             -1.0603 -1.0081             -1.0603 -1.0081 TS254 165
166 TS261             -1.0603 -1.0081             -1.0603 -1.0081 TS261 166
167 TS263             -1.0603 -1.0081             -1.0603 -1.0081 TS263 167
168 TS269             -1.0603 -1.0081             -1.0603 -1.0081 TS269 168
169 TS279             -1.0603 -1.0081             -1.0603 -1.0081 TS279 169
170 TS322             -1.0603 -1.0081             -1.0603 -1.0081 TS322 170
171 TS330             -1.0603 -1.0081             -1.0603 -1.0081 TS330 171
172 TS331             -1.0603 -1.0081             -1.0603 -1.0081 TS331 172
173 TS347             -1.0603 -1.0081             -1.0603 -1.0081 TS347 173
174 TS358             -1.0603 -1.0081             -1.0603 -1.0081 TS358 174
175 TS362             -1.0603 -1.0081             -1.0603 -1.0081 TS362 175
176 TS433             -1.0603 -1.0081             -1.0603 -1.0081 TS433 176
177 TS439             -1.0603 -1.0081             -1.0603 -1.0081 TS439 177
178 TS461             -1.0603 -1.0081             -1.0603 -1.0081 TS461 178