T0531

JTB from Homo Sapiens

Target type: Human/Server

Target sequence:

>T0531 JTB, Homo Sapiens, 65 residues
GSGMKEFPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALMEQR

HHsearch_pdb70_15May10, HHsearch_scop70_1.75, HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:

Method: NMR

Determined by: Non-SGI research Centers and others

PDB ID: 2kjx

Jmol of T0531 structure : 2kjx

PyMOL of T0531

Domains:

Single domain protein.

DomainID	Chain	Range in raw pdb	Range in targetpdb
T0531	A	1-65	4-65

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Free-modelling target? No good templates available.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: FM alignment.

Closest templates:

Template manually selected by shuoyong:

2dsr_G | PyMOL of 2dsr G, No good template found, partial similarity with 2dsr_G.

Template selected by HHpred server group:

1v8h_A | PyMOL | this pdbchain contains scop domain: d1v8ha1 A:2-107

2oxg_Z | PyMOL

1p1p_A | PyMOL | this pdbchain contains scop domain: d1p1pa_ A:

1zt3_A | PyMOL

1o65_A | PyMOL | this pdbchain contains scop domain: d1o65a_ A:

Target sequence - PDB file inconsistencies:

Sequence classification:

Jumping translocation breakpoint protein (JTB) (PF05391).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

#	GROUP ↓	TS ↓	TR ↓	TS ↓	TR ↓	TS ↓	TR ↓	TS ↓	TR ↓	↓ GROUP	#
		T0531		T0531		T0531		T0531
		First score		First Z-score		Best score		Best Z-score
1	TS490	41.5320	37.2310	3.2728	3.8066	41.5320	37.2310	3.2728	3.8066	TS490	1
2	TS055	40.7260	34.0050	3.0946	2.9920	40.7260	34.0050	3.0946	2.9920	TS055	2
3	TS208	40.3230	35.2150	3.0056	3.2975	41.9350	36.2900	3.3618	3.5690	TS208	3
4	TS160	39.5160	30.9140	2.8272	2.2114	39.5160	30.9140	2.8272	2.2114	TS160	4
5	TS399	37.9030	32.5270	2.4708	2.6187	42.7420	34.4090	3.5402	3.0940	TS399	5
6	TS471	35.8870	31.0480	2.0252	2.2452	35.8870	31.0480	2.0252	2.2452	TS471	6
7	TS220	35.8870	26.2100	2.0252	1.0235	35.8870	26.7470	2.0252	1.1591	TS220	7
8	TS447	35.8870	26.2100	2.0252	1.0235	35.8870	26.7470	2.0252	1.1591	TS447	8
9	TS240	35.0810	29.4350	1.8471	1.8379	35.0810	29.4350	1.8471	1.8379	TS240	9
10	TS001	33.8710	26.3440	1.5797	1.0573	41.9350	36.0220	3.3618	3.5013	TS001	10
11	TS119	33.4680	27.0160	1.4907	1.2270	37.9030	31.9890	2.4708	2.4829	TS119	11
12	TS215	33.0650	26.6130	1.4016	1.1253	37.9030	31.7200	2.4708	2.4149	TS215	12
13	TS037	33.0650	26.3440	1.4016	1.0573	33.8710	26.8820	1.5797	1.1932	TS037	13
14	TS113	33.0650	26.0750	1.4016	0.9894	33.4680	27.0160	1.4907	1.2270	TS113	14
15	TS060	32.2580	30.5110	1.2232	2.1096	32.2580	30.5110	1.2232	2.1096	TS060	15
16	TS104	32.2580	27.9570	1.2232	1.4647	33.8710	30.3760	1.5797	2.0755	TS104	16
17	TS457	32.2580	25.8060	1.2232	0.9215	38.7100	31.1830	2.6491	2.2793	TS457	17
18	TS380	32.2580	25.5380	1.2232	0.8538	32.2580	25.5380	1.2232	0.8538	TS380	18
19	TS402	32.2580	23.9250	1.2232	0.4465	36.6940	31.1830	2.2036	2.2793	TS402	19
20	TS276	31.4520	26.7470	1.0451	1.1591	31.4520	26.7470	1.0451	1.1591	TS276	20
21	TS077	31.4520	26.7470	1.0451	1.1591	31.4520	26.7470	1.0451	1.1591	TS077	21
22	TS286	31.4520	26.7470	1.0451	1.1591	31.4520	26.7470	1.0451	1.1591	TS286	22
23	TS127	31.4520	24.1940	1.0451	0.5144	31.4520	26.2100	1.0451	1.0235	TS127	23
24	TS435	30.6450	27.6880	0.8668	1.3967	31.8550	27.6880	1.1342	1.3967	TS435	24
25	TS063	30.6450	26.6130	0.8668	1.1253	30.6450	26.6130	0.8668	1.1253	TS063	25
26	TS470	30.6450	23.6560	0.8668	0.3785	31.0480	25.4030	0.9558	0.8197	TS470	26
27	TS142	30.2420	26.7470	0.7777	1.1591	35.8870	26.7470	2.0252	1.1591	TS142	27
28	TS242	30.2420	25.6720	0.7777	0.8876	30.2420	27.2850	0.7777	1.2950	TS242	28
29	TS373	29.8390	27.4190	0.6887	1.3288	30.2420	27.4190	0.7777	1.3288	TS373	29
30	TS214	29.8390	26.6130	0.6887	1.1253	31.4520	26.6130	1.0451	1.1253	TS214	30
31	TS094	29.8390	23.1180	0.6887	0.2427	32.2580	25.5380	1.2232	0.8538	TS094	31
32	TS407	29.8390	23.1180	0.6887	0.2427	31.4520	24.1940	1.0451	0.5144	TS407	32
33	TS282	29.4350	26.3440	0.5994	1.0573	29.4350	26.3440	0.5994	1.0573	TS282	33
34	TS296	29.4350	26.3440	0.5994	1.0573	29.8390	26.3440	0.6887	1.0573	TS296	34
35	TS165	29.4350	23.5220	0.5994	0.3447	35.0810	28.3600	1.8471	1.5664	TS165	35
36	TS033	29.4350	23.3870	0.5994	0.3106	29.4350	24.0590	0.5994	0.4803	TS033	36
37	TS386	29.4350	22.7150	0.5994	0.1409	29.4350	24.0590	0.5994	0.4803	TS386	37
38	TS014	29.4350	21.7740	0.5994	-0.0967	29.4350	27.0160	0.5994	1.2270	TS014	38
39	TS253	29.0320	24.7310	0.5103	0.6500	29.0320	24.7310	0.5103	0.6500	TS253	39
40	TS429	29.0320	22.7150	0.5103	0.1409	34.6770	29.9730	1.7578	1.9738	TS429	40
41	TS045	29.0320	20.9680	0.5103	-0.3003	30.6450	27.1510	0.8668	1.2611	TS045	41
42	TS096	28.6290	22.8490	0.4213	0.1747	32.2580	25.5380	1.2232	0.8538	TS096	42
43	TS016	28.6290	20.8330	0.4213	-0.3344	29.0320	22.3120	0.5103	0.0391	TS016	43
44	TS403	28.2260	23.6560	0.3322	0.3785	28.2260	23.6560	0.3322	0.3785	TS403	44
45	TS428	28.2260	20.0270	0.3322	-0.5379	31.4520	25.0000	1.0451	0.7179	TS428	45
46	TS102	27.8230	24.3280	0.2431	0.5482	29.0320	24.3280	0.5103	0.5482	TS102	46
47	AL285	27.8230	23.2530	0.2431	0.2768	27.8230	23.2530	0.2431	0.2768	AL285	47
48	TS450	27.8230	22.4460	0.2431	0.0730	27.8230	22.4460	0.2431	0.0730	TS450	48
49	TS458	27.8230	21.3710	0.2431	-0.1985	27.8230	24.4620	0.2431	0.5821	TS458	49
50	TS028	27.8230	20.4300	0.2431	-0.4361	31.4520	25.4030	1.0451	0.8197	TS028	50
51	TS302	27.8230	20.4300	0.2431	-0.4361	31.4520	25.4030	1.0451	0.8197	TS302	51
52	TS152	27.8230	18.0110	0.2431	-1.0470	27.8230	22.7150	0.2431	0.1409	TS152	52
53	TS408	27.4190	26.2100	0.1538	1.0235	28.6290	26.2100	0.4213	1.0235	TS408	53
54	TS409	27.4190	23.9250	0.1538	0.4465	27.4190	23.9250	0.1538	0.4465	TS409	54
55	TS236	27.4190	23.6560	0.1538	0.3785	27.4190	23.6560	0.1538	0.3785	TS236	55
56	TS395	27.4190	22.0430	0.1538	-0.0288	30.2420	25.9410	0.7777	0.9556	TS395	56
57	TS452	27.4190	21.9090	0.1538	-0.0626	27.4190	22.8490	0.1538	0.1747	TS452	57
58	TS291	27.4190	20.1610	0.1538	-0.5041	29.8390	21.2370	0.6887	-0.2323	TS291	58
59	TS264	27.0160	24.0590	0.0648	0.4803	27.0160	24.4620	0.0648	0.5821	TS264	59
60	TS365	27.0160	22.5810	0.0648	0.1071	34.6770	29.1670	1.7578	1.7702	TS365	60
61	TS182	27.0160	18.4140	0.0648	-0.9452	29.4350	22.9840	0.5994	0.2088	TS182	61
62	TS088	26.6130	23.1180	-0.0243	0.2427	40.7260	36.1560	3.0946	3.5351	TS088	62
63	TS147	26.6130	21.5050	-0.0243	-0.1647	31.0480	28.0910	0.9558	1.4985	TS147	63
64	TS299	26.6130	20.6990	-0.0243	-0.3682	27.4190	22.4460	0.1538	0.0730	TS299	64
65	TS213	26.2100	22.7150	-0.1133	0.1409	29.8390	23.6560	0.6887	0.3785	TS213	65
66	TS314	26.2100	22.4460	-0.1133	0.0730	29.0320	24.4620	0.5103	0.5821	TS314	66
67	TS149	26.2100	22.4460	-0.1133	0.0730	26.2100	22.4460	-0.1133	0.0730	TS149	67
68	TS321	26.2100	21.9090	-0.1133	-0.0626	35.0810	29.4350	1.8471	1.8379	TS321	68
69	TS419	26.2100	21.9090	-0.1133	-0.0626	26.2100	21.9090	-0.1133	-0.0626	TS419	69
70	TS250	26.2100	21.1020	-0.1133	-0.2664	26.2100	23.1180	-0.1133	0.2427	TS250	70
71	TS304	26.2100	20.5650	-0.1133	-0.4020	26.6130	25.4030	-0.0243	0.8197	TS304	71
72	TS080	26.2100	19.7580	-0.1133	-0.6058	29.8390	25.2690	0.6887	0.7859	TS080	72
73	TS229	25.8060	23.3870	-0.2026	0.3106	26.6130	23.3870	-0.0243	0.3106	TS229	73
74	TS423	25.8060	22.8490	-0.2026	0.1747	28.2260	24.1940	0.3322	0.5144	TS423	74
75	TS075	25.8060	22.4460	-0.2026	0.0730	25.8060	22.4460	-0.2026	0.0730	TS075	75
76	TS042	25.8060	22.3120	-0.2026	0.0391	28.2260	23.9250	0.3322	0.4465	TS042	76
77	TS316	25.8060	22.3120	-0.2026	0.0391	27.4190	24.7310	0.1538	0.6500	TS316	77
78	TS020	25.8060	20.6990	-0.2026	-0.3682	27.0160	21.9090	0.0648	-0.0626	TS020	78
79	TS484	25.8060	19.6240	-0.2026	-0.6397	26.2100	22.7150	-0.1133	0.1409	TS484	79
80	TS391	25.8060	18.8170	-0.2026	-0.8435	25.8060	18.8170	-0.2026	-0.8435	TS391	80
81	TS353	25.4030	21.6400	-0.2917	-0.1306	25.8060	21.6400	-0.2026	-0.1306	TS353	81
82	TS418	25.4030	19.6240	-0.2917	-0.6397	33.8710	25.8060	1.5797	0.9215	TS418	82
83	TS200	25.4030	19.4890	-0.2917	-0.6738	26.6130	23.1180	-0.0243	0.2427	TS200	83
84	TS345	25.4030	18.5480	-0.2917	-0.9114	27.8230	23.2530	0.2431	0.2768	TS345	84
85	TS047	25.0000	22.7150	-0.3807	0.1409	25.0000	22.7150	-0.3807	0.1409	TS047	85
86	TS481	25.0000	22.3120	-0.3807	0.0391	27.4190	25.2690	0.1538	0.7859	TS481	86
87	TS218	25.0000	22.0430	-0.3807	-0.0288	25.0000	22.0430	-0.3807	-0.0288	TS218	87
88	TS361	25.0000	22.0430	-0.3807	-0.0288	32.6610	25.9410	1.3123	0.9556	TS361	88
89	TS153	25.0000	21.7740	-0.3807	-0.0967	25.0000	21.7740	-0.3807	-0.0967	TS153	89
90	TS084	25.0000	21.3710	-0.3807	-0.1985	31.0480	26.7470	0.9558	1.1591	TS084	90
91	AL396	25.0000	20.4300	-0.3807	-0.4361	28.6290	21.3710	0.4213	-0.1985	AL396	91
92	TS307	25.0000	20.4300	-0.3807	-0.4361	30.6450	27.4190	0.8668	1.3288	TS307	92
93	TS039	25.0000	19.8920	-0.3807	-0.5720	25.0000	21.1020	-0.3807	-0.2664	TS039	93
94	TS461	24.5970	22.1770	-0.4698	0.0050	27.0160	24.4620	0.0648	0.5821	TS461	94
95	TS355	24.5970	21.6400	-0.4698	-0.1306	34.2740	27.6880	1.6688	1.3967	TS355	95
96	TS269	24.5970	21.3710	-0.4698	-0.1985	25.0000	22.7150	-0.3807	0.1409	TS269	96
97	TS083	24.5970	19.4890	-0.4698	-0.6738	26.6130	22.0430	-0.0243	-0.0288	TS083	97
98	TS166	24.5970	18.9520	-0.4698	-0.8094	24.5970	19.8920	-0.4698	-0.5720	TS166	98
99	TS192	24.5970	18.9520	-0.4698	-0.8094	24.5970	18.9520	-0.4698	-0.8094	TS192	99
100	TS206	24.1940	22.3120	-0.5589	0.0391	24.1940	22.3120	-0.5589	0.0391	TS206	100
101	TS400	24.1940	21.5050	-0.5589	-0.1647	30.2420	25.4030	0.7777	0.8197	TS400	101
102	TS103	24.1940	20.1610	-0.5589	-0.5041	24.1940	20.1610	-0.5589	-0.5041	TS103	102
103	TS439	24.1940	19.6240	-0.5589	-0.6397	28.6290	24.3280	0.4213	0.5482	TS439	103
104	TS278	24.1940	19.2200	-0.5589	-0.7417	24.1940	19.2200	-0.5589	-0.7417	TS278	104
105	RANDOM	24.00	19.82	-0.6017	-0.5902	24.00	19.82	-0.6017	-0.5902	RANDOM	105
106	TS117	23.7900	20.8330	-0.6481	-0.3344	23.7900	20.8330	-0.6481	-0.3344	TS117	106
107	TS186	23.7900	20.5650	-0.6481	-0.4020	30.2420	26.6130	0.7777	1.1253	TS186	107
108	TS257	23.7900	20.4300	-0.6481	-0.4361	27.8230	23.5220	0.2431	0.3447	TS257	108
109	TS319	23.7900	19.6240	-0.6481	-0.6397	36.6940	31.5860	2.2036	2.3811	TS319	109
110	TS172	23.7900	19.3550	-0.6481	-0.7076	36.6940	35.6180	2.2036	3.3993	TS172	110
111	TS086	23.7900	18.1450	-0.6481	-1.0132	26.2100	21.9090	-0.1133	-0.0626	TS086	111
112	TS382	23.7900	18.0110	-0.6481	-1.0470	30.2420	23.6560	0.7777	0.3785	TS382	112
113	TS324	23.3870	21.5050	-0.7372	-0.1647	23.3870	21.7740	-0.7372	-0.0967	TS324	113
114	TS056	23.3870	21.2370	-0.7372	-0.2323	32.2580	25.6720	1.2232	0.8876	TS056	114
115	TS002	23.3870	18.2800	-0.7372	-0.9791	32.6610	25.9410	1.3123	0.9556	TS002	115
116	TS330	23.3870	16.3980	-0.7372	-1.4543	23.3870	16.3980	-0.7372	-1.4543	TS330	116
117	TS114	22.9840	19.8920	-0.8263	-0.5720	25.8060	22.0430	-0.2026	-0.0288	TS114	117
118	TS110	22.9840	14.7850	-0.8263	-1.8617	38.3060	30.7800	2.5598	2.1775	TS110	118
119	TS174	22.5810	21.2370	-0.9153	-0.2323	25.4030	22.1770	-0.2917	0.0050	TS174	119
120	TS248	22.5810	20.1610	-0.9153	-0.5041	22.9840	20.1610	-0.8263	-0.5041	TS248	120
121	TS449	22.5810	20.1610	-0.9153	-0.5041	22.5810	20.1610	-0.9153	-0.5041	TS449	121
122	TS453	22.5810	20.1610	-0.9153	-0.5041	22.5810	20.1610	-0.9153	-0.5041	TS453	122
123	TS346	22.5810	20.1610	-0.9153	-0.5041	22.5810	20.1610	-0.9153	-0.5041	TS346	123
124	TS360	22.5810	20.0270	-0.9153	-0.5379	27.8230	24.0590	0.2431	0.4803	TS360	124
125	TS295	22.5810	19.8920	-0.9153	-0.5720	27.0160	23.3870	0.0648	0.3106	TS295	125
126	TS275	22.5810	19.6240	-0.9153	-0.6397	25.8060	21.2370	-0.2026	-0.2323	TS275	126
127	TS029	22.5810	19.3550	-0.9153	-0.7076	22.5810	19.3550	-0.9153	-0.7076	TS029	127
128	TS433	22.5810	15.5910	-0.9153	-1.6581	25.0000	19.6240	-0.3807	-0.6397	TS433	128
129	TS331	22.5810	15.5910	-0.9153	-1.6581	23.3870	19.3550	-0.7372	-0.7076	TS331	129
130	TS476	22.1770	18.1450	-1.0046	-1.0132	22.9840	20.2960	-0.8263	-0.4700	TS476	130
131	TS140	22.1770	18.1450	-1.0046	-1.0132	22.1770	19.6240	-1.0046	-0.6397	TS140	131
132	TS350	22.1770	16.2630	-1.0046	-1.4884	26.6130	23.1180	-0.0243	0.2427	TS350	132
133	TS424	21.7740	18.2800	-1.0937	-0.9791	36.6940	31.5860	2.2036	2.3811	TS424	133
134	TS207	21.7740	18.0110	-1.0937	-1.0470	29.4350	24.0590	0.5994	0.4803	TS207	134
135	TS420	21.7740	16.9350	-1.0937	-1.3187	21.7740	16.9350	-1.0937	-1.3187	TS420	135
136	TS044	21.3710	18.8170	-1.1827	-0.8435	22.9840	19.4890	-0.8263	-0.6738	TS044	136
137	TS297	21.3710	16.5320	-1.1827	-1.4205	24.1940	19.6240	-0.5589	-0.6397	TS297	137
138	TS289	20.9680	19.4890	-1.2718	-0.6738	20.9680	19.4890	-1.2718	-0.6738	TS289	138
139	TS018	20.9680	19.3550	-1.2718	-0.7076	25.8060	22.5810	-0.2026	0.1071	TS018	139
140	TS477	20.9680	18.8170	-1.2718	-0.8435	29.0320	27.9570	0.5103	1.4647	TS477	140
141	TS171	20.9680	18.0110	-1.2718	-1.0470	20.9680	18.0110	-1.2718	-1.0470	TS171	141
142	TS366	20.9680	17.7420	-1.2718	-1.1149	30.6450	26.6130	0.8668	1.1253	TS366	142
143	TS173	20.9680	14.2470	-1.2718	-1.9975	33.8710	30.1080	1.5797	2.0078	TS173	143
144	TS273	20.9680	14.2470	-1.2718	-1.9975	36.6940	31.5860	2.2036	2.3811	TS273	144
145	TS311	20.5650	18.9520	-1.3609	-0.8094	20.5650	18.9520	-1.3609	-0.8094	TS311	145
146	TS333	20.5650	17.4730	-1.3609	-1.1829	28.6290	25.9410	0.4213	0.9556	TS333	146
147	TS244	20.1610	18.8170	-1.4501	-0.8435	32.2580	26.6130	1.2232	1.1253	TS244	147
148	TS322	19.7580	15.7260	-1.5392	-1.6240	20.1610	16.9350	-1.4501	-1.3187	TS322	148
149	TS129	19.3550	15.0540	-1.6283	-1.7937	21.7740	20.2960	-1.0937	-0.4700	TS129	149
150	TS301	18.1450	15.9950	-1.8957	-1.5561	21.7740	19.3550	-1.0937	-0.7076	TS301	150
151	TS436	13.7100	12.9030	-2.8758	-2.3369	13.7100	12.9030	-2.8758	-2.3369	TS436	151
152	TS009			-0.6017	-0.5902			-0.6017	-0.5902	TS009	152
153	TS026			-0.6017	-0.5902			-0.6017	-0.5902	TS026	153
154	TS035			-0.6017	-0.5902			-0.6017	-0.5902	TS035	154
155	TS061			-0.6017	-0.5902			-0.6017	-0.5902	TS061	155
156	TS074			-0.6017	-0.5902			-0.6017	-0.5902	TS074	156
157	TS105			-0.6017	-0.5902			-0.6017	-0.5902	TS105	157
158	TS150			-0.6017	-0.5902			-0.6017	-0.5902	TS150	158
159	TS154			-0.6017	-0.5902			-0.6017	-0.5902	TS154	159
160	TS170			-0.6017	-0.5902			-0.6017	-0.5902	TS170	160
161	TS178			-0.6017	-0.5902			-0.6017	-0.5902	TS178	161
162	TS180			-0.6017	-0.5902			-0.6017	-0.5902	TS180	162
163	TS184			-0.6017	-0.5902			-0.6017	-0.5902	TS184	163
164	TS189			-0.6017	-0.5902			-0.6017	-0.5902	TS189	164
165	TS199			-0.6017	-0.5902			-0.6017	-0.5902	TS199	165
166	TS228			-0.6017	-0.5902			-0.6017	-0.5902	TS228	166
167	TS245			-0.6017	-0.5902			-0.6017	-0.5902	TS245	167
168	TS254			-0.6017	-0.5902			-0.6017	-0.5902	TS254	168
169	TS261			-0.6017	-0.5902			-0.6017	-0.5902	TS261	169
170	TS263			-0.6017	-0.5902			-0.6017	-0.5902	TS263	170
171	TS279			-0.6017	-0.5902			-0.6017	-0.5902	TS279	171
172	TS300			-0.6017	-0.5902			-0.6017	-0.5902	TS300	172
173	TS328			-0.6017	-0.5902			-0.6017	-0.5902	TS328	173
174	TS336			-0.6017	-0.5902			-0.6017	-0.5902	TS336	174
175	TS347			-0.6017	-0.5902			-0.6017	-0.5902	TS347	175
176	TS358			-0.6017	-0.5902			-0.6017	-0.5902	TS358	176
177	TS362			-0.6017	-0.5902			-0.6017	-0.5902	TS362	177
178	TS444			-0.6017	-0.5902			-0.6017	-0.5902	TS444	178

Targets
515	516	517	518
519	520	521	522
523	524	525	526
527	528	529	530
531	532	533	534
535	536	537	538
539	540	541	542
543	544	545	546
547	548	549	550
551	552	553	554
555	556	557	558
559	560	561	562
563	564	565	566
567	568	569	570
571	572	573	574
575	576	577	578
579	580	581	582
583	584	585	586
587	588	589	590
591	592	593	594
595	596	597	598
599	600	601	602
603	604	605	606
607	608	609	610
611	612	613	614
615	616	617	618
619	620	621	622
623	624	625	626
627	628	629	630
631	632	633	634
635	636	637	638
639	640	641	642
643