T0590

Targets
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555 556 557 558
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639 640 641 642
643      

T0590

MaR143A from unknown species

Target type: Human/Server

Target sequence:

>T0590 MaR143A, unknown species, 137 residues
MNARDNKFNTWNDSRGNYWSDYEGSDENGDGIGDSAYAVNPEAGSMDYMPLMEYLHSSPVLPTARFTSDITEGFAPLSVRFKDFSENATSRLWMFGDGNTSDSPSPLHTFFNEGEYIVSLIVSNENDSDSASVTIRA

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0,  HorAServer

Structure:
Method: NMR
Determined by: NESG
PDB ID: 2kzw

Jmol of T0590 structure : 2kzw

PyMOL of T0590

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0590A1-14557-137

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

two domain proteins. No good template available for N-terminal. C-terminal domain (around 56-end) is a PKD domain, Ig-like.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

1l0q_A | PyMOL of 1l0q A 299-382, only find good template for C-terminal (around 56-end), which belongs to PKD superfmaily.

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

N-terminal might be a Periplasmic copper-binding protein (NosD) (PF05048), C-teminal is a PKD domain (PF00801).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0590 T0590 T0590 T0590
First score First Z-score Best score Best Z-score
1 TS321 83.6540 77.2440 0.9115 1.0151 83.6540 77.2440 0.9115 1.0151 TS321 1
2 TS275 82.6920 75.8550 0.8649 0.9441 82.6920 75.8550 0.8649 0.9441 TS275 2
3 TS001 82.6920 75.8550 0.8649 0.9441 82.6920 75.8550 0.8649 0.9441 TS001 3
4 TS395 82.3720 76.8160 0.8494 0.9932 83.0130 77.0300 0.8805 1.0042 TS395 4
5 TS119 81.7310 74.0380 0.8183 0.8511 82.3720 74.0380 0.8494 0.8511 TS119 5
6 TS110 81.7310 74.0380 0.8183 0.8511 81.7310 74.0380 0.8183 0.8511 TS110 6
7 TS208 81.7310 72.1150 0.8183 0.7527 81.7310 72.6500 0.8183 0.7800 TS208 7
8 TS236 81.4100 75.8550 0.8028 0.9441 82.0510 76.0680 0.8338 0.9550 TS236 8
9 TS206 81.4100 74.5730 0.8028 0.8785 81.4100 74.5730 0.8028 0.8785 TS206 9
10 TS172 81.0900 76.8160 0.7873 0.9932 81.7310 77.8850 0.8183 1.0480 TS172 10
11 TS418 81.0900 75.3210 0.7873 0.9167 81.0900 75.8550 0.7873 0.9441 TS418 11
12 TS304 81.0900 72.3290 0.7873 0.7636 81.0900 72.3290 0.7873 0.7636 TS304 12
13 TS074 81.0900 71.4740 0.7873 0.7199 81.0900 71.4740 0.7873 0.7199 TS074 13
14 TS173 80.7690 73.9320 0.7717 0.8456 81.0900 74.0380 0.7873 0.8511 TS173 14
15 TS094 80.7690 72.8630 0.7717 0.7909 80.7690 72.8630 0.7717 0.7909 TS094 15
16 TS409 80.7690 72.4360 0.7717 0.7691 80.7690 72.4360 0.7717 0.7691 TS409 16
17 TS407 80.7690 70.5130 0.7717 0.6707 81.0900 73.8250 0.7873 0.8402 TS407 17
18 TS215 80.7690 70.5130 0.7717 0.6707 81.4100 75.0000 0.8028 0.9003 TS215 18
19 TS080 80.7690 70.5130 0.7717 0.6707 81.4100 75.0000 0.8028 0.9003 TS080 19
20 TS016 80.7690 69.8720 0.7717 0.6379 80.7690 75.8550 0.7717 0.9441 TS016 20
21 TS490 80.4490 73.8250 0.7562 0.8402 80.4490 73.8250 0.7562 0.8402 TS490 21
22 TS113 80.4490 72.7560 0.7562 0.7855 80.4490 73.6110 0.7562 0.8292 TS113 22
23 TS361 80.4490 72.5430 0.7562 0.7746 81.4100 75.6410 0.8028 0.9331 TS361 23
24 TS314 80.4490 71.9020 0.7562 0.7418 80.4490 71.9020 0.7562 0.7418 TS314 24
25 TS149 80.1280 75.0000 0.7406 0.9003 80.1280 75.0000 0.7406 0.9003 TS149 25
26 TS481 80.1280 74.5730 0.7406 0.8785 80.4490 74.8930 0.7562 0.8948 TS481 26
27 TS386 80.1280 72.4360 0.7406 0.7691 81.4100 73.1840 0.8028 0.8074 TS386 27
28 TS461 80.1280 72.0090 0.7406 0.7472 80.7690 73.2910 0.7717 0.8128 TS461 28
29 TS380 80.1280 71.1540 0.7406 0.7035 80.1280 71.7950 0.7406 0.7363 TS380 29
30 TS240 80.1280 68.8030 0.7406 0.5832 80.1280 68.8030 0.7406 0.5832 TS240 30
31 TS428 79.8080 74.8930 0.7251 0.8948 81.0900 74.8930 0.7873 0.8948 TS428 31
32 TS360 79.8080 72.3290 0.7251 0.7636 79.8080 72.3290 0.7251 0.7636 TS360 32
33 TS295 79.8080 71.4740 0.7251 0.7199 81.7310 76.2820 0.8183 0.9659 TS295 33
34 TS002 79.8080 70.8330 0.7251 0.6871 80.7690 73.6110 0.7717 0.8292 TS002 34
35 TS096 79.8080 68.2690 0.7251 0.5558 79.8080 72.2220 0.7251 0.7581 TS096 35
36 TS056 79.4870 74.7860 0.7096 0.8894 81.0900 75.3210 0.7873 0.9167 TS056 36
37 TS114 79.4870 73.5040 0.7096 0.8237 81.0900 76.8160 0.7873 0.9932 TS114 37
38 TS276 79.1670 73.3970 0.6940 0.8183 79.1670 73.8250 0.6940 0.8402 TS276 38
39 TS286 79.1670 73.3970 0.6940 0.8183 79.1670 73.8250 0.6940 0.8402 TS286 39
40 TS186 79.1670 72.7560 0.6940 0.7855 79.8080 75.4270 0.7251 0.9222 TS186 40
41 TS324 79.1670 71.9020 0.6940 0.7418 84.2950 77.4570 0.9426 1.0260 TS324 41
42 TS214 79.1670 70.4060 0.6940 0.6652 79.4870 72.8630 0.7096 0.7909 TS214 42
43 TS028 79.1670 70.1920 0.6940 0.6542 79.1670 70.1920 0.6940 0.6542 TS028 43
44 TS242 79.1670 69.3380 0.6940 0.6105 79.1670 69.3380 0.6940 0.6105 TS242 44
45 TS104 79.1670 62.0730 0.6940 0.2387 79.8080 71.0470 0.7251 0.6980 TS104 45
46 TS449 78.8460 73.0770 0.6785 0.8019 78.8460 73.0770 0.6785 0.8019 TS449 46
47 TS453 78.8460 73.0770 0.6785 0.8019 78.8460 73.0770 0.6785 0.8019 TS453 47
48 TS346 78.8460 73.0770 0.6785 0.8019 78.8460 73.0770 0.6785 0.8019 TS346 48
49 TS127 78.8460 72.4360 0.6785 0.7691 78.8460 72.4360 0.6785 0.7691 TS127 49
50 TS018 78.8460 72.4360 0.6785 0.7691 78.8460 72.4360 0.6785 0.7691 TS018 50
51 TS365 78.8460 72.2220 0.6785 0.7581 78.8460 72.2220 0.6785 0.7581 TS365 51
52 TS273 78.8460 72.2220 0.6785 0.7581 82.6920 75.8550 0.8649 0.9441 TS273 52
53 TS452 78.8460 71.3680 0.6785 0.7144 78.8460 71.3680 0.6785 0.7144 TS452 53
54 TS282 78.8460 70.7260 0.6785 0.6816 78.8460 70.7260 0.6785 0.6816 TS282 54
55 TS403 78.8460 69.8720 0.6785 0.6379 78.8460 69.8720 0.6785 0.6379 TS403 55
56 TS047 78.5260 73.8250 0.6630 0.8402 78.5260 73.8250 0.6630 0.8402 TS047 56
57 TS470 78.5260 71.9020 0.6630 0.7418 81.4100 75.8550 0.8028 0.9441 TS470 57
58 TS103 78.5260 71.4740 0.6630 0.7199 78.5260 71.9020 0.6630 0.7418 TS103 58
59 TS033 78.5260 71.0470 0.6630 0.6980 80.7690 74.3590 0.7717 0.8675 TS033 59
60 TS165 78.5260 70.8330 0.6630 0.6871 78.5260 70.8330 0.6630 0.6871 TS165 60
61 TS077 78.5260 70.8330 0.6630 0.6871 78.5260 74.2520 0.6630 0.8620 TS077 61
62 TS458 78.5260 69.3380 0.6630 0.6105 78.8460 69.4440 0.6785 0.6160 TS458 62
63 TS147 78.5260 66.7740 0.6630 0.4793 79.1670 73.6110 0.6940 0.8292 TS147 63
64 TS026 78.2050 71.1540 0.6474 0.7035 80.1280 72.6500 0.7406 0.7800 TS026 64
65 TS307 78.2050 70.0850 0.6474 0.6488 78.2050 72.2220 0.6474 0.7581 TS307 65
66 TS228 77.8850 73.1840 0.6319 0.8074 77.8850 73.1840 0.6319 0.8074 TS228 66
67 TS300 77.8850 71.9020 0.6319 0.7418 78.5260 71.9020 0.6630 0.7418 TS300 67
68 TS301 77.8850 71.9020 0.6319 0.7418 77.8850 71.9020 0.6319 0.7418 TS301 68
69 TS429 77.8850 71.4740 0.6319 0.7199 79.1670 72.2220 0.6940 0.7581 TS429 69
70 TS400 77.8850 70.8330 0.6319 0.6871 79.4870 75.6410 0.7096 0.9331 TS400 70
71 TS055 77.8850 70.1920 0.6319 0.6542 79.1670 70.6200 0.6940 0.6762 TS055 71
72 TS291 77.8850 67.6280 0.6319 0.5230 77.8850 69.3380 0.6319 0.6105 TS291 72
73 TS244 77.8850 66.5600 0.6319 0.4684 77.8850 67.6280 0.6319 0.5230 TS244 73
74 TS037 77.8850 64.2090 0.6319 0.3481 80.1280 74.1450 0.7406 0.8565 TS037 74
75 TS450 77.5640 69.4440 0.6163 0.6160 77.5640 69.4440 0.6163 0.6160 TS450 75
76 TS299 77.5640 67.3080 0.6163 0.5067 78.2050 72.2220 0.6474 0.7581 TS299 76
77 TS088 77.5640 66.4530 0.6163 0.4629 78.2050 72.4360 0.6474 0.7691 TS088 77
78 TS213 77.2440 71.2610 0.6008 0.7090 77.8850 73.6110 0.6319 0.8292 TS213 78
79 TS297 76.9230 67.3080 0.5853 0.5067 80.4490 76.3890 0.7562 0.9714 TS297 79
80 TS061 76.6030 74.6790 0.5698 0.8839 76.6030 74.6790 0.5698 0.8839 TS061 80
81 AL285 76.6030 71.0470 0.5698 0.6980 76.6030 71.0470 0.5698 0.6980 AL285 81
82 TS399 76.6030 67.2010 0.5698 0.5012 76.6030 69.9790 0.5698 0.6433 TS399 82
83 TS319 76.2820 66.6670 0.5542 0.4738 79.1670 73.1840 0.6940 0.8074 TS319 83
84 TS484 75.6410 69.8720 0.5231 0.6379 82.3720 75.6410 0.8494 0.9331 TS484 84
85 TS424 75.6410 68.8030 0.5231 0.5832 78.5260 68.8030 0.6630 0.5832 TS424 85
86 TS083 75.6410 64.7440 0.5231 0.3754 75.6410 67.6280 0.5231 0.5230 TS083 86
87 TS477 75.6410 62.3930 0.5231 0.2551 79.1670 73.3970 0.6940 0.8183 TS477 87
88 TS218 75.3210 68.9100 0.5076 0.5886 78.5260 73.2910 0.6630 0.8128 TS218 88
89 TS382 75.0000 70.2990 0.4921 0.6597 79.1670 73.3970 0.6940 0.8183 TS382 89
90 TS419 75.0000 66.2390 0.4921 0.4519 83.6540 77.2440 0.9115 1.0151 TS419 90
91 TS166 75.0000 66.2390 0.4921 0.4519 75.0000 66.8800 0.4921 0.4847 TS166 91
92 TS278 74.6790 68.4830 0.4765 0.5668 74.6790 68.4830 0.4765 0.5668 TS278 92
93 TS045 74.3590 56.9440 0.4610 -0.0237 74.3590 56.9440 0.4610 -0.0237 TS045 93
94 TS117 73.3970 69.3380 0.4144 0.6105 73.3970 69.3380 0.4144 0.6105 TS117 94
95 TS353 73.3970 67.6280 0.4144 0.5230 75.3210 68.9100 0.5076 0.5886 TS353 95
96 TS035 73.0770 59.6150 0.3989 0.1129 73.0770 59.6150 0.3989 0.1129 TS035 96
97 TS402 70.8330 63.5680 0.2901 0.3153 73.7180 63.5680 0.4299 0.3153 TS402 97
98 TS170 70.8330 60.7910 0.2901 0.1731 75.0000 64.9570 0.4921 0.3863 TS170 98
99 AL396 68.5900 61.7520 0.1814 0.2223 78.2050 71.7950 0.6474 0.7363 AL396 99
100 TS457 66.3460 49.2520 0.0726 -0.4174 67.6280 54.1670 0.1347 -0.1659 TS457 100
101 TS207 66.0260 62.1790 0.0571 0.2442 66.0260 62.1790 0.0571 0.2442 TS207 101
102 TS253 63.4620 56.8380 -0.0672 -0.0292 69.5510 58.0130 0.2279 0.0310 TS253 102
103 TS408 63.4620 49.7860 -0.0672 -0.3901 77.2440 67.8420 0.6008 0.5340 TS408 103
104 TS174 62.5000 50.9620 -0.1138 -0.3299 62.5000 50.9620 -0.1138 -0.3299 TS174 104
105 TS436 62.1790 54.4870 -0.1294 -0.1495 62.1790 54.4870 -0.1294 -0.1495 TS436 105
106 TS063 59.6150 48.9320 -0.2537 -0.4338 60.2560 50.0000 -0.2226 -0.3791 TS063 106
107 TS366 58.9740 48.0770 -0.2847 -0.4775 60.2560 50.0000 -0.2226 -0.3791 TS366 107
108 TS171 58.6540 48.6110 -0.3003 -0.4502 58.6540 48.6110 -0.3003 -0.4502 TS171 108
109 TS296 58.3330 47.2220 -0.3158 -0.5213 77.8850 71.9020 0.6319 0.7418 TS296 109
110 TS248 58.0130 51.8160 -0.3313 -0.2862 58.3330 52.8850 -0.3158 -0.2315 TS248 110
111 TS476 49.3590 45.7260 -0.7508 -0.5978 49.3590 45.7260 -0.7508 -0.5978 TS476 111
112 TS420 49.3590 45.7260 -0.7508 -0.5978 49.3590 45.7260 -0.7508 -0.5978 TS420 112
113 TS471 49.3590 45.7260 -0.7508 -0.5978 49.3590 45.7260 -0.7508 -0.5978 TS471 113
114 TS435 49.3590 42.7350 -0.7508 -0.7509 53.2050 45.5130 -0.5644 -0.6088 TS435 114
115 TS423 45.5130 40.8120 -0.9372 -0.8493 45.5130 40.8120 -0.9372 -0.8493 TS423 115
116 TS102 39.7440 35.4700 -1.2169 -1.1227 51.2820 49.5730 -0.6576 -0.4010 TS102 116
117 TS250 37.8210 31.4100 -1.3101 -1.3305 46.7950 40.1710 -0.8751 -0.8821 TS250 117
118 TS153 35.5770 31.9440 -1.4188 -1.3032 35.5770 31.9440 -1.4188 -1.3032 TS153 118
119 TS391 35.5770 31.1970 -1.4188 -1.3414 35.5770 31.1970 -1.4188 -1.3414 TS391 119
120 TS350 33.9740 32.0510 -1.4965 -1.2977 33.9740 32.0510 -1.4965 -1.2977 TS350 120
121 TS316 33.9740 29.0600 -1.4965 -1.4508 43.9100 40.0640 -1.0149 -0.8876 TS316 121
122 TS042 33.6540 32.7990 -1.5121 -1.2594 38.1410 32.7990 -1.2946 -1.2594 TS042 122
123 TS154 32.0510 26.2820 -1.5898 -1.5929 32.0510 26.2820 -1.5898 -1.5929 TS154 123
124 TS302 30.1280 27.9910 -1.6830 -1.5055 70.1920 63.7820 0.2590 0.3262 TS302 124
125 TS142 30.1280 27.9910 -1.6830 -1.5055 70.1920 63.7820 0.2590 0.3262 TS142 125
126 TS220 30.1280 27.9910 -1.6830 -1.5055 35.5770 31.9440 -1.4188 -1.3032 TS220 126
127 TS447 30.1280 27.9910 -1.6830 -1.5055 35.5770 31.9440 -1.4188 -1.3032 TS447 127
128 TS200 28.8460 26.1750 -1.7451 -1.5984 38.1410 32.4790 -1.2946 -1.2758 TS200 128
129 TS257 28.8460 24.5730 -1.7451 -1.6804 31.0900 28.7390 -1.6363 -1.4672 TS257 129
130 TS084 27.2440 21.6880 -1.8228 -1.8280 35.5770 34.0810 -1.4188 -1.1938 TS084 130
131 TS333 26.9230 24.3590 -1.8383 -1.6913 83.3330 79.2740 0.8960 1.1190 TS333 131
132 TS328 25.9620 22.3290 -1.8849 -1.7952 25.9620 22.3290 -1.8849 -1.7952 TS328 132
133 TS014 25.6410 22.6500 -1.9005 -1.7788 26.2820 23.9320 -1.8694 -1.7132 TS014 133
134 TS020 23.0770 22.4360 -2.0247 -1.7898 23.0770 22.4360 -2.0247 -1.7898 TS020 134
135 TS264 23.0770 21.3680 -2.0247 -1.8444 31.0900 31.0900 -1.6363 -1.3469 TS264 135
136 TS245 23.0770 20.7260 -2.0247 -1.8773 23.0770 20.7260 -2.0247 -1.8773 TS245 136
137 TS355 22.7560 19.7650 -2.0403 -1.9265 36.2180 31.3030 -1.3878 -1.3360 TS355 137
138 TS345 21.1540 19.2310 -2.1180 -1.9538 62.8210 55.1280 -0.0983 -0.1167 TS345 138
139 TS029 21.1540 16.9870 -2.1180 -2.0686 21.4740 18.2690 -2.1024 -2.0030 TS029 139
140 RANDOM 21.13 18.63 -2.1191 -1.9845 21.13 18.63 -2.1191 -1.9845 RANDOM 140
141 TS311 20.8330 18.2690 -2.1335 -2.0030 78.2050 69.6580 0.6474 0.6269 TS311 141
142 TS229 20.8330 17.2010 -2.1335 -2.0577 20.8330 17.8420 -2.1335 -2.0249 TS229 142
143 TS289 19.2310 14.7440 -2.2112 -2.1834 19.2310 14.7440 -2.2112 -2.1834 TS289 143
144 TS373 18.9100 16.7740 -2.2267 -2.0795 23.7180 21.5810 -1.9937 -1.8335 TS373 144
145 TS129 18.2690 16.9870 -2.2578 -2.0686 81.0900 76.6030 0.7873 0.9823 TS129 145
146 TS199 17.9490 14.5300 -2.2733 -2.1944 17.9490 14.5300 -2.2733 -2.1944 TS199 146
147 TS336 16.9870 16.1320 -2.3199 -2.1124 16.9870 16.1320 -2.3199 -2.1124 TS336 147
148 TS444 16.0260 13.0340 -2.3665 -2.2709 22.1150 20.6200 -2.0714 -1.8827 TS444 148
149 TS075 0.0000 0.0000 -3.1433 -2.9380 0.0000 0.0000 -3.1433 -2.9380 TS075 149
150 TS009             -2.1191 -1.9845             -2.1191 -1.9845 TS009 150
151 TS039             -2.1191 -1.9845             -2.1191 -1.9845 TS039 151
152 TS044             -2.1191 -1.9845             -2.1191 -1.9845 TS044 152
153 TS060             -2.1191 -1.9845             -2.1191 -1.9845 TS060 153
154 TS086             -2.1191 -1.9845             -2.1191 -1.9845 TS086 154
155 TS105             -2.1191 -1.9845             -2.1191 -1.9845 TS105 155
156 TS140             -2.1191 -1.9845             -2.1191 -1.9845 TS140 156
157 TS150             -2.1191 -1.9845             -2.1191 -1.9845 TS150 157
158 TS152             -2.1191 -1.9845             -2.1191 -1.9845 TS152 158
159 TS160             -2.1191 -1.9845             -2.1191 -1.9845 TS160 159
160 TS178             -2.1191 -1.9845             -2.1191 -1.9845 TS178 160
161 TS180             -2.1191 -1.9845             -2.1191 -1.9845 TS180 161
162 TS182             -2.1191 -1.9845             -2.1191 -1.9845 TS182 162
163 TS184             -2.1191 -1.9845             -2.1191 -1.9845 TS184 163
164 TS189             -2.1191 -1.9845             -2.1191 -1.9845 TS189 164
165 TS192             -2.1191 -1.9845             -2.1191 -1.9845 TS192 165
166 TS254             -2.1191 -1.9845             -2.1191 -1.9845 TS254 166
167 TS261             -2.1191 -1.9845             -2.1191 -1.9845 TS261 167
168 TS263             -2.1191 -1.9845             -2.1191 -1.9845 TS263 168
169 TS269             -2.1191 -1.9845             -2.1191 -1.9845 TS269 169
170 TS279             -2.1191 -1.9845             -2.1191 -1.9845 TS279 170
171 TS322             -2.1191 -1.9845             -2.1191 -1.9845 TS322 171
172 TS330             -2.1191 -1.9845             -2.1191 -1.9845 TS330 172
173 TS331             -2.1191 -1.9845             -2.1191 -1.9845 TS331 173
174 TS347             -2.1191 -1.9845             -2.1191 -1.9845 TS347 174
175 TS358             -2.1191 -1.9845             -2.1191 -1.9845 TS358 175
176 TS362             -2.1191 -1.9845             -2.1191 -1.9845 TS362 176
177 TS433             -2.1191 -1.9845             -2.1191 -1.9845 TS433 177
178 TS439             -2.1191 -1.9845             -2.1191 -1.9845 TS439 178