T0587
3NDV from unknown species
Target sequence:
>T0587 3NDV, unknown species, 397 residues
GPRARDLGVPFEGTPGALNAITDVAGVEVGHTTVISGDGAMVIGKGPYRTGVTIIHPLGKTSLDGVAAGRAVINGTGEWTGMHLVDEVGQFLGPIALTGTGNVGLVHQSMMDWSVGKVPEEALFSRLLPVVAETLDNRLNDVFGHGLTRDHVFAALDGAKGGPVAEGNVGGGTGMIAYTFKGGIGTSSRVVSAGDTRYTVGVLVQANHGDRNDLRIAGVQIGKEIKGAWPEVNGIVAAGPDAGKPQDKNSLLIVIATDAPLMPHQLERMARRAALGVGRNGSTAGALSGEFALAFSTSHVIPLGGKPRLPAIINDTDSETMNALFRGVVQATEEALVNQLVASETMTGANNAKVYGIPHDQLARIMKARFPRR
HHsearch_pdb70_15May10, HHsearch_scop70_1.75, HHsearch_pfamA.24.0
Structure:
Determined by:
Non-SGI research Centers and others
PDB ID:
canceled
Jmol of closest template of T0587: 1b65 chain A
Domains:
Structure classification:
The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time
DMPA, protein (aminopeptidase); hydrolase, peptide degradation, NTN hydrolase. DmpA/ArgJ-like, 4 layers: alpha/beta/beta/alpha, duplication of beta(3)-alpha-beta-alpha motif;
CASP category:
Closest templates:
Template manually selected by shuoyong:
Template selected by HHpred server group:
Target sequence - PDB file inconsistencies:
Sequence classification:
Peptidase family S58 (PF03576)
All predictions:
TS (GDT_TS score), TR (GDT_TS with penalty [reference]