T0554 (canceled by organizer)

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
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619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0554

TeR219A from unknown species

Target type: Server only

Target sequence:

>T0554 TeR219A, unknown species, 135 residues
MPVELRANWSEEDLETVIRAVYRQVLGNDYVMASERLVSAESLLRNGKITVREFVRAVAKSELYKEKFLYGNFQTRVIELNYKHLLGRAPYDESEVIFHLDLYENEGFDADIDSYIDSPEYTNSFGDWVVPYYRG

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0

Structure:
Method: NMR
Determined by: NESG
PDB ID: canceled

Domains:  

  

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Hard target? Six helical bundle

CASP category:

 

Closest templates:

Template manually selected by shuoyong:

No good template found for now, needs more study

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Phycobilisome Linker polypeptide (PF00427).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP
1 TS001_1
2 TS001_2
3 TS001_3
4 TS001_4
5 TS001_5
6 TS002_1
7 TS002_2
8 TS002_3
9 TS002_4
10 TS002_5
11 TS018_1
12 TS018_2
13 TS018_3
14 TS018_4
15 TS018_5
16 TS028_1
17 TS028_2
18 TS028_3
19 TS028_4
20 TS028_5
21 TS037_1
22 TS037_2
23 TS037_3
24 TS037_4
25 TS037_5
26 TS047_1
27 TS055_1
28 TS055_2
29 TS055_3
30 TS055_4
31 TS055_5
32 TS056_1
33 TS056_2
34 TS056_3
35 TS056_4
36 TS056_5
37 TS060_1
38 TS060_2
39 TS060_3
40 TS060_4
41 TS060_5
42 TS063_1
43 TS063_2
44 TS063_3
45 TS063_4
46 TS063_5
47 TS077_1
48 TS077_2
49 TS077_3
50 TS077_4
51 TS077_5
52 TS080_1
53 TS080_2
54 TS080_3
55 TS080_4
56 TS080_5
57 TS088_1
58 TS088_2
59 TS088_3
60 TS088_4
61 TS088_5
62 TS094_1
63 TS094_2
64 TS094_3
65 TS094_4
66 TS094_5
67 TS102_1
68 TS102_2
69 TS102_3
70 TS102_4
71 TS102_5
72 TS103_1
73 TS103_3
74 TS103_4
75 TS103_5
76 TS104_1
77 TS113_1
78 TS113_2
79 TS113_3
80 TS113_4
81 TS113_5
82 TS114_1
83 TS114_2
84 TS114_3
85 TS114_4
86 TS114_5
87 TS117_1
88 TS117_2
89 TS117_3
90 TS117_4
91 TS117_5
92 TS119_1
93 TS119_2
94 TS119_3
95 TS119_4
96 TS119_5
97 TS127_1
98 TS127_2
99 TS127_3
100 TS127_4
101 TS127_5
102 TS129_1
103 TS129_2
104 TS129_3
105 TS129_4
106 TS129_5
107 TS142_1
108 TS142_2
109 TS142_3
110 TS142_4
111 TS142_5
112 TS165_1
113 TS165_2
114 TS165_3
115 TS165_4
116 TS165_5
117 TS166_1
118 TS166_2
119 TS166_3
120 TS166_4
121 TS166_5
122 TS171_1
123 TS173_1
124 TS173_2
125 TS173_3
126 TS173_4
127 TS173_5
128 TS174_1
129 TS174_2
130 TS174_3
131 TS174_4
132 TS174_5
133 TS207_1
134 TS207_2
135 TS207_3
136 TS207_4
137 TS207_5
138 TS208_1
139 TS208_2
140 TS208_3
141 TS208_4
142 TS208_5
143 TS213_1
144 TS213_2
145 TS213_3
146 TS213_4
147 TS213_5
148 TS214_1
149 TS214_2
150 TS214_3
151 TS214_4
152 TS214_5
153 TS215_1
154 TS215_2
155 TS215_3
156 TS215_4
157 TS215_5
158 TS218_1
159 TS218_2
160 TS218_3
161 TS218_4
162 TS218_5
163 TS220_1
164 TS220_2
165 TS220_3
166 TS220_4
167 TS220_5
168 TS229_1
169 TS229_2
170 TS229_3
171 TS229_4
172 TS229_5
173 TS236_1
174 TS236_2
175 TS236_3
176 TS236_4
177 TS236_5
178 TS244_1
179 TS244_2
180 TS244_3
181 TS244_4
182 TS244_5
183 TS248_1
184 TS248_2
185 TS248_3
186 TS248_4
187 TS248_5
188 TS250_1
189 TS250_2
190 TS253_1
191 TS253_2
192 TS253_3
193 TS253_4
194 TS253_5
195 TS257_1
196 TS257_2
197 TS257_3
198 TS257_4
199 TS257_5
200 TS264_1
201 TS264_2
202 TS264_3
203 TS264_4
204 TS264_5
205 TS273_1
206 TS273_2
207 TS273_3
208 TS273_4
209 TS273_5
210 TS275_1
211 TS275_2
212 TS275_3
213 TS275_4
214 TS275_5
215 TS276_1
216 TS276_2
217 TS276_3
218 TS276_4
219 TS276_5
220 AL285_1
221 AL285_2
222 AL285_3
223 AL285_4
224 AL285_5
225 TS286_1
226 TS286_2
227 TS286_3
228 TS286_4
229 TS286_5
230 TS289_2
231 TS291_1
232 TS291_2
233 TS291_3
234 TS291_4
235 TS291_5
236 TS296_1
237 TS296_2
238 TS296_3
239 TS296_4
240 TS296_5
241 TS302_1
242 TS302_2
243 TS302_3
244 TS302_4
245 TS302_5
246 TS304_1
247 TS304_2
248 TS304_3
249 TS304_4
250 TS304_5
251 TS307_1
252 TS307_2
253 TS307_3
254 TS307_4
255 TS307_5
256 TS314_1
257 TS314_2
258 TS314_3
259 TS314_4
260 TS314_5
261 TS319_1
262 TS319_2
263 TS319_3
264 TS319_4
265 TS319_5
266 TS321_1
267 TS321_2
268 TS321_3
269 TS321_4
270 TS321_5
271 TS328_1
272 TS345_1
273 TS345_2
274 TS345_3
275 TS345_4
276 TS345_5
277 TS346_1
278 TS350_1
279 TS350_2
280 TS350_3
281 TS350_4
282 TS350_5
283 TS355_1
284 TS355_2
285 TS355_3
286 TS355_4
287 TS355_5
288 TS361_1
289 TS361_2
290 TS361_3
291 TS361_4
292 TS361_5
293 TS366_1
294 TS366_2
295 TS366_3
296 TS366_4
297 TS366_5
298 TS380_1
299 TS380_2
300 TS380_3
301 TS380_4
302 TS380_5
303 TS391_1
304 TS395_1
305 TS395_2
306 TS395_3
307 TS395_4
308 TS395_5
309 AL396_1
310 AL396_2
311 AL396_3
312 AL396_4
313 AL396_5
314 TS407_1
315 TS407_2
316 TS407_3
317 TS407_4
318 TS407_5
319 TS409_1
320 TS409_2
321 TS409_3
322 TS409_4
323 TS409_5
324 TS418_1
325 TS418_2
326 TS418_3
327 TS418_4
328 TS418_5
329 TS419_1
330 TS419_2
331 TS419_3
332 TS419_4
333 TS419_5
334 TS420_1
335 TS428_1
336 TS428_2
337 TS428_3
338 TS428_4
339 TS428_5
340 TS429_1
341 TS429_2
342 TS429_3
343 TS429_4
344 TS429_5
345 TS435_1
346 TS435_2
347 TS435_3
348 TS435_4
349 TS435_5
350 TS436_1
351 TS444_1
352 TS444_2
353 TS444_3
354 TS444_4
355 TS444_5
356 TS447_1
357 TS447_2
358 TS447_3
359 TS447_4
360 TS447_5
361 TS449_1
362 TS452_1
363 TS452_2
364 TS452_3
365 TS452_4
366 TS452_5
367 TS453_1
368 TS457_1
369 TS457_2
370 TS457_3
371 TS457_4
372 TS457_5
373 TS470_1
374 TS470_2
375 TS470_3
376 TS470_4
377 TS470_5
378 TS471_1
379 TS476_1
380 TS476_2
381 TS476_3
382 TS476_4
383 TS481_1
384 TS481_2
385 TS481_3
386 TS481_4
387 TS481_5
388 TS490_1
389 TS490_2
390 TS490_3
391 TS490_4
392 TS490_5