T0549 (canceled by organizer)

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0549

CvR118A from unknown species

Target type: Server only

Target sequence:

>T0549 CvR118A, unknown species, 84 residues
MPHKEKHPLQDMFTSAIEAVARDSGWAELSAVGSYLAKNDPSFDPRNWGHGRLSQMVKKLDFLTVQESRNGSKLHSEIRLRHDG

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: NMR
Determined by: NESG
PDB ID: 2kzv

Jmol of T0549 structure : 2kzv

PyMOL of T0549

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0549A1-926-82

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Three helical bundle with a extended beta strand hairpin. some similarity with IscX-like.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

2kpm_A | PyMOL of 2kpm A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

No significant hit found, it has some similiarity with Protein of unknown function (DUF528) (PF04384).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0549 T0549 T0549 T0549
First score First Z-score Best score Best Z-score
1 TS366 71.4290 64.2860 1.3757 1.3773 71.4290 64.2860 1.3757 1.3773 TS366 1
2 TS063 71.4290 64.2860 1.3757 1.3773 71.4290 64.2860 1.3757 1.3773 TS063 2
3 TS077 71.1040 64.3940 1.3481 1.3868 71.1040 64.3940 1.3481 1.3868 TS077 3
4 TS286 71.1040 64.3940 1.3481 1.3868 71.1040 64.3940 1.3481 1.3868 TS286 4
5 TS276 70.7790 64.9350 1.3204 1.4343 70.7790 64.9350 1.3204 1.4343 TS276 5
6 TS026 69.8050 63.3120 1.2376 1.2917 69.8050 63.3120 1.2376 1.2917 TS026 6
7 TS103 69.4810 61.2550 1.2101 1.1109 70.1300 62.9870 1.2653 1.2631 TS103 7
8 TS028 69.1560 62.8790 1.1825 1.2536 69.1560 62.8790 1.1825 1.2536 TS028 8
9 TS174 69.1560 62.4460 1.1825 1.2156 69.1560 62.4460 1.1825 1.2156 TS174 9
10 TS047 67.8570 62.0130 1.0721 1.1775 67.8570 62.0130 1.0721 1.1775 TS047 10
11 TS291 66.8830 60.8230 0.9893 1.0729 66.8830 60.8230 0.9893 1.0729 TS291 11
12 TS102 66.5580 57.0350 0.9617 0.7400 68.5060 62.6620 1.1272 1.2345 TS102 12
13 TS055 65.9090 61.1470 0.9065 1.1014 65.9090 61.1470 0.9065 1.1014 TS055 13
14 TS380 65.5840 60.3900 0.8789 1.0348 65.9090 60.3900 0.9065 1.0348 TS380 14
15 TS436 65.5840 60.3900 0.8789 1.0348 65.5840 60.3900 0.8789 1.0348 TS436 15
16 TS173 64.9350 47.8350 0.8237 -0.0687 64.9350 58.6580 0.8237 0.8826 TS173 16
17 TS395 63.9610 57.9000 0.7409 0.8160 64.2860 58.4420 0.7686 0.8636 TS395 17
18 TS207 63.3120 57.6840 0.6858 0.7970 64.2860 57.6840 0.7686 0.7970 TS207 18
19 TS428 63.3120 57.4680 0.6858 0.7780 66.2340 58.6580 0.9341 0.8826 TS428 19
20 TS321 62.9870 59.0910 0.6582 0.9207 62.9870 59.0910 0.6582 0.9207 TS321 20
21 TS117 62.9870 58.6580 0.6582 0.8826 62.9870 58.8740 0.6582 0.9016 TS117 21
22 TS457 62.9870 58.2250 0.6582 0.8446 65.5840 60.3900 0.8789 1.0348 TS457 22
23 TS490 62.9870 57.7920 0.6582 0.8065 62.9870 57.7920 0.6582 0.8065 TS490 23
24 TS037 62.6620 58.1170 0.6305 0.8351 64.9350 61.0390 0.8237 1.0919 TS037 24
25 TS208 62.3380 57.5760 0.6030 0.7875 64.6100 58.9830 0.7961 0.9112 TS208 25
26 TS319 62.3380 57.1430 0.6030 0.7495 62.3380 57.1430 0.6030 0.7495 TS319 26
27 TS275 62.0130 57.0350 0.5754 0.7400 71.4290 64.5020 1.3757 1.3963 TS275 27
28 TS481 62.0130 55.7360 0.5754 0.6258 62.9870 57.1430 0.6582 0.7495 TS481 28
29 TS127 62.0130 51.4070 0.5754 0.2453 62.0130 56.0610 0.5754 0.6544 TS127 29
30 TS228 61.6880 57.1430 0.5477 0.7495 63.3120 58.9830 0.6858 0.9112 TS228 30
31 TS307 61.6880 56.0610 0.5477 0.6544 61.6880 58.1170 0.5477 0.8351 TS307 31
32 TS094 61.6880 55.6280 0.5477 0.6163 62.0130 56.6020 0.5754 0.7019 TS094 32
33 TS452 61.6880 55.6280 0.5477 0.6163 62.0130 56.6020 0.5754 0.7019 TS452 33
34 TS435 61.6880 55.4110 0.5477 0.5972 61.6880 55.4110 0.5477 0.5972 TS435 34
35 TS189 61.6880 50.4330 0.5477 0.1597 62.3380 51.9480 0.6030 0.2928 TS189 35
36 TS114 61.6880 48.2680 0.5477 -0.0306 61.6880 56.2770 0.5477 0.6733 TS114 36
37 TS171 61.3640 55.7360 0.5202 0.6258 61.3640 55.7360 0.5202 0.6258 TS171 37
38 TS470 61.3640 55.7360 0.5202 0.6258 61.6880 56.0610 0.5477 0.6544 TS470 38
39 AL396 61.3640 55.5190 0.5202 0.6067 61.3640 55.5190 0.5202 0.6067 AL396 39
40 TS407 61.3640 55.5190 0.5202 0.6067 63.3120 57.4680 0.6858 0.7780 TS407 40
41 AL285 61.3640 55.5190 0.5202 0.6067 61.3640 55.5190 0.5202 0.6067 AL285 41
42 TS236 61.3640 55.5190 0.5202 0.6067 61.3640 55.7360 0.5202 0.6258 TS236 42
43 TS253 61.0390 56.7100 0.4926 0.7114 61.6880 56.7100 0.5477 0.7114 TS253 43
44 TS088 61.0390 56.0610 0.4926 0.6544 64.2860 60.1730 0.7686 1.0158 TS088 44
45 TS213 61.0390 56.0610 0.4926 0.6544 68.1820 64.2860 1.0997 1.3773 TS213 45
46 TS165 61.0390 55.8440 0.4926 0.6353 62.9870 56.0610 0.6582 0.6544 TS165 46
47 TS476 61.0390 55.6280 0.4926 0.6163 61.0390 55.6280 0.4926 0.6163 TS476 47
48 TS420 61.0390 55.6280 0.4926 0.6163 61.0390 55.6280 0.4926 0.6163 TS420 48
49 TS471 61.0390 55.6280 0.4926 0.6163 61.0390 55.6280 0.4926 0.6163 TS471 49
50 TS104 61.0390 55.1950 0.4926 0.5782 61.0390 55.1950 0.4926 0.5782 TS104 50
51 TS001 61.0390 54.9780 0.4926 0.5592 62.3380 57.1430 0.6030 0.7495 TS001 51
52 TS361 61.0390 54.9780 0.4926 0.5592 61.6880 56.3850 0.5477 0.6828 TS361 52
53 TS214 61.0390 54.5450 0.4926 0.5211 61.6880 56.9260 0.5477 0.7304 TS214 53
54 TS244 61.0390 52.3810 0.4926 0.3309 68.5060 61.7970 1.1272 1.1585 TS244 54
55 TS345 61.0390 47.4030 0.4926 -0.1066 63.3120 56.0610 0.6858 0.6544 TS345 55
56 TS113 60.7140 56.1690 0.4650 0.6638 62.0130 56.6020 0.5754 0.7019 TS113 56
57 TS250 60.7140 55.9520 0.4650 0.6448 61.0390 57.1430 0.4926 0.7495 TS250 57
58 TS429 60.7140 55.5190 0.4650 0.6067 62.0130 56.0610 0.5754 0.6544 TS429 58
59 TS119 60.7140 55.5190 0.4650 0.6067 60.7140 55.5190 0.4650 0.6067 TS119 59
60 TS328 60.7140 55.3030 0.4650 0.5877 60.7140 55.3030 0.4650 0.5877 TS328 60
61 TS080 60.7140 55.3030 0.4650 0.5877 60.7140 55.3030 0.4650 0.5877 TS080 61
62 TS002 60.7140 55.3030 0.4650 0.5877 60.7140 55.3030 0.4650 0.5877 TS002 62
63 TS056 60.7140 54.8700 0.4650 0.5497 62.9870 58.2250 0.6582 0.8446 TS056 63
64 TS166 60.7140 54.6540 0.4650 0.5307 63.6360 60.3900 0.7133 1.0348 TS166 64
65 TS302 60.7140 54.4370 0.4650 0.5116 65.2600 54.4370 0.8513 0.5116 TS302 65
66 TS142 60.7140 54.4370 0.4650 0.5116 65.2600 54.4370 0.8513 0.5116 TS142 66
67 TS449 60.7140 54.4370 0.4650 0.5116 60.7140 54.4370 0.4650 0.5116 TS449 67
68 TS453 60.7140 54.4370 0.4650 0.5116 60.7140 54.4370 0.4650 0.5116 TS453 68
69 TS346 60.7140 54.4370 0.4650 0.5116 60.7140 54.4370 0.4650 0.5116 TS346 69
70 TS273 60.7140 54.2210 0.4650 0.4926 62.3380 57.1430 0.6030 0.7495 TS273 70
71 TS409 60.3900 54.9780 0.4374 0.5592 60.3900 54.9780 0.4374 0.5592 TS409 71
72 TS245 60.3900 54.9780 0.4374 0.5592 60.3900 54.9780 0.4374 0.5592 TS245 72
73 TS314 60.0650 51.2990 0.4098 0.2358 60.0650 51.2990 0.4098 0.2358 TS314 73
74 TS218 58.1170 53.7880 0.2442 0.4546 58.4420 54.3290 0.2719 0.5021 TS218 74
75 TS215 58.1170 50.9740 0.2442 0.2072 60.7140 55.3030 0.4650 0.5877 TS215 75
76 TS220 58.1170 40.0430 0.2442 -0.7535 60.7140 54.4370 0.4650 0.5116 TS220 76
77 TS447 58.1170 40.0430 0.2442 -0.7535 60.7140 54.4370 0.4650 0.5116 TS447 77
78 TS391 57.4680 45.9960 0.1891 -0.2303 57.4680 45.9960 0.1891 -0.2303 TS391 78
79 TS248 56.4940 50.0000 0.1063 0.1216 56.8180 52.1650 0.1338 0.3119 TS248 79
80 TS304 49.3510 44.5890 -0.5008 -0.3540 57.1430 51.2990 0.1614 0.2358 TS304 80
81 TS296 41.8830 41.6670 -1.1356 -0.6108 61.0390 54.9780 0.4926 0.5592 TS296 81
82 TS039 38.3120 31.2770 -1.4391 -1.5240 38.3120 32.0350 -1.4391 -1.4574 TS039 82
83 TS086 38.3120 31.2770 -1.4391 -1.5240 38.3120 32.0350 -1.4391 -1.4574 TS086 83
84 TS355 37.9870 30.8440 -1.4667 -1.5621 37.9870 33.8740 -1.4667 -1.2958 TS355 84
85 TS257 34.0910 30.4110 -1.7978 -1.6001 50.0000 40.9090 -0.4457 -0.6774 TS257 85
86 TS331 34.0910 26.8400 -1.7978 -1.9140 34.0910 28.3550 -1.7978 -1.7809 TS331 86
87 TS269 33.1170 29.0040 -1.8806 -1.7238 33.1170 30.1950 -1.8806 -1.6191 TS269 87
88 TS152 33.1170 29.0040 -1.8806 -1.7238 33.1170 30.1950 -1.8806 -1.6191 TS152 88
89 TS350 30.1950 25.8660 -2.1290 -1.9996 39.2860 34.0910 -1.3563 -1.2767 TS350 89
90 TS322 29.8700 27.2730 -2.1566 -1.8760 31.8180 28.5710 -1.9910 -1.7619 TS322 90
91 TS444 28.5710 25.7580 -2.2670 -2.0091 30.1950 25.7580 -2.1290 -2.0091 TS444 91
92 TS140 27.9220 23.5930 -2.3222 -2.1994 40.9090 31.3850 -1.2184 -1.5145 TS140 92
93 TS229 25.9740 23.2680 -2.4877 -2.2280 27.2730 25.6490 -2.3773 -2.0187 TS229 93
94 RANDOM 24.94 20.48 -2.5756 -2.4730 24.94 20.48 -2.5756 -2.4730 RANDOM 94
95 TS018 23.7010 20.6710 -2.6809 -2.4562 33.4420 26.7320 -1.8530 -1.9235 TS018 95
96 TS289 22.4030 19.8050 -2.7913 -2.5323 22.4030 19.8050 -2.7913 -2.5323 TS289 96
97 TS129 19.8050 18.3980 -3.0121 -2.6560 24.0260 18.3980 -2.6533 -2.6560 TS129 97
98 TS009             -2.5756 -2.4730             -2.5756 -2.4730 TS009 98
99 TS014             -2.5756 -2.4730             -2.5756 -2.4730 TS014 99
100 TS016             -2.5756 -2.4730             -2.5756 -2.4730 TS016 100
101 TS020             -2.5756 -2.4730             -2.5756 -2.4730 TS020 101
102 TS029             -2.5756 -2.4730             -2.5756 -2.4730 TS029 102
103 TS033             -2.5756 -2.4730             -2.5756 -2.4730 TS033 103
104 TS035             -2.5756 -2.4730             -2.5756 -2.4730 TS035 104
105 TS042             -2.5756 -2.4730             -2.5756 -2.4730 TS042 105
106 TS044             -2.5756 -2.4730             -2.5756 -2.4730 TS044 106
107 TS045             -2.5756 -2.4730             -2.5756 -2.4730 TS045 107
108 TS060             -2.5756 -2.4730             -2.5756 -2.4730 TS060 108
109 TS061             -2.5756 -2.4730             -2.5756 -2.4730 TS061 109
110 TS074             -2.5756 -2.4730             -2.5756 -2.4730 TS074 110
111 TS075             -2.5756 -2.4730             -2.5756 -2.4730 TS075 111
112 TS083             -2.5756 -2.4730             -2.5756 -2.4730 TS083 112
113 TS084             -2.5756 -2.4730             -2.5756 -2.4730 TS084 113
114 TS096             -2.5756 -2.4730             -2.5756 -2.4730 TS096 114
115 TS105             -2.5756 -2.4730             -2.5756 -2.4730 TS105 115
116 TS110             -2.5756 -2.4730             -2.5756 -2.4730 TS110 116
117 TS147             -2.5756 -2.4730             -2.5756 -2.4730 TS147 117
118 TS149             -2.5756 -2.4730             -2.5756 -2.4730 TS149 118
119 TS150             -2.5756 -2.4730             -2.5756 -2.4730 TS150 119
120 TS153             -2.5756 -2.4730             -2.5756 -2.4730 TS153 120
121 TS154             -2.5756 -2.4730             -2.5756 -2.4730 TS154 121
122 TS160             -2.5756 -2.4730             -2.5756 -2.4730 TS160 122
123 TS170             -2.5756 -2.4730             -2.5756 -2.4730 TS170 123
124 TS172             -2.5756 -2.4730             -2.5756 -2.4730 TS172 124
125 TS178             -2.5756 -2.4730             -2.5756 -2.4730 TS178 125
126 TS180             -2.5756 -2.4730             -2.5756 -2.4730 TS180 126
127 TS182             -2.5756 -2.4730             -2.5756 -2.4730 TS182 127
128 TS184             -2.5756 -2.4730             -2.5756 -2.4730 TS184 128
129 TS186             -2.5756 -2.4730             -2.5756 -2.4730 TS186 129
130 TS192             -2.5756 -2.4730             -2.5756 -2.4730 TS192 130
131 TS199             -2.5756 -2.4730             -2.5756 -2.4730 TS199 131
132 TS200             -2.5756 -2.4730             -2.5756 -2.4730 TS200 132
133 TS206             -2.5756 -2.4730             -2.5756 -2.4730 TS206 133
134 TS240             -2.5756 -2.4730             -2.5756 -2.4730 TS240 134
135 TS242             -2.5756 -2.4730             -2.5756 -2.4730 TS242 135
136 TS254             -2.5756 -2.4730             -2.5756 -2.4730 TS254 136
137 TS261             -2.5756 -2.4730             -2.5756 -2.4730 TS261 137
138 TS263             -2.5756 -2.4730             -2.5756 -2.4730 TS263 138
139 TS264             -2.5756 -2.4730             -2.5756 -2.4730 TS264 139
140 TS278             -2.5756 -2.4730             -2.5756 -2.4730 TS278 140
141 TS279             -2.5756 -2.4730             -2.5756 -2.4730 TS279 141
142 TS282             -2.5756 -2.4730             -2.5756 -2.4730 TS282 142
143 TS295             -2.5756 -2.4730             -2.5756 -2.4730 TS295 143
144 TS297             -2.5756 -2.4730             -2.5756 -2.4730 TS297 144
145 TS299             -2.5756 -2.4730             -2.5756 -2.4730 TS299 145
146 TS300             -2.5756 -2.4730             -2.5756 -2.4730 TS300 146
147 TS301             -2.5756 -2.4730             -2.5756 -2.4730 TS301 147
148 TS311             -2.5756 -2.4730             -2.5756 -2.4730 TS311 148
149 TS316             -2.5756 -2.4730             -2.5756 -2.4730 TS316 149
150 TS324             -2.5756 -2.4730             -2.5756 -2.4730 TS324 150
151 TS330             -2.5756 -2.4730             -2.5756 -2.4730 TS330 151
152 TS333             -2.5756 -2.4730             -2.5756 -2.4730 TS333 152
153 TS336             -2.5756 -2.4730             -2.5756 -2.4730 TS336 153
154 TS347             -2.5756 -2.4730             -2.5756 -2.4730 TS347 154
155 TS353             -2.5756 -2.4730             -2.5756 -2.4730 TS353 155
156 TS358             -2.5756 -2.4730             -2.5756 -2.4730 TS358 156
157 TS360             -2.5756 -2.4730             -2.5756 -2.4730 TS360 157
158 TS362             -2.5756 -2.4730             -2.5756 -2.4730 TS362 158
159 TS365             -2.5756 -2.4730             -2.5756 -2.4730 TS365 159
160 TS373             -2.5756 -2.4730             -2.5756 -2.4730 TS373 160
161 TS382             -2.5756 -2.4730             -2.5756 -2.4730 TS382 161
162 TS386             -2.5756 -2.4730             -2.5756 -2.4730 TS386 162
163 TS399             -2.5756 -2.4730             -2.5756 -2.4730 TS399 163
164 TS400             -2.5756 -2.4730             -2.5756 -2.4730 TS400 164
165 TS402             -2.5756 -2.4730             -2.5756 -2.4730 TS402 165
166 TS403             -2.5756 -2.4730             -2.5756 -2.4730 TS403 166
167 TS408             -2.5756 -2.4730             -2.5756 -2.4730 TS408 167
168 TS418             -2.5756 -2.4730             -2.5756 -2.4730 TS418 168
169 TS419             -2.5756 -2.4730             -2.5756 -2.4730 TS419 169
170 TS423             -2.5756 -2.4730             -2.5756 -2.4730 TS423 170
171 TS424             -2.5756 -2.4730             -2.5756 -2.4730 TS424 171
172 TS433             -2.5756 -2.4730             -2.5756 -2.4730 TS433 172
173 TS439             -2.5756 -2.4730             -2.5756 -2.4730 TS439 173
174 TS450             -2.5756 -2.4730             -2.5756 -2.4730 TS450 174
175 TS458             -2.5756 -2.4730             -2.5756 -2.4730 TS458 175
176 TS461             -2.5756 -2.4730             -2.5756 -2.4730 TS461 176
177 TS477             -2.5756 -2.4730             -2.5756 -2.4730 TS477 177
178 TS484             -2.5756 -2.4730             -2.5756 -2.4730 TS484 178