T0569

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
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619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0569

PtR41O from unknown species

Target type: Human/Server

Target sequence:

>T0569 PtR41O, unknown species, 79 residues
MDEDATITYVDDDKGGAQVGDIVTVTGKTDDSTTYTVTIPDGYEYVGTDGGVVSSDGKTVTITFAADDSDNVVIHLKHG

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: NMR
Determined by: NESG
PDB ID: 2kyw

Jmol of T0569 structure : 2kyw

PyMOL of T0569

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0569A1-871-79

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

Mucus binding protein. This target resembles beta-grasp fold except that the alpha helix of beta grasp fold may be substituted by strand

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

3i57_A | PyMOL of 3i57 A 1-75

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

No significatn Pfam hits.

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0569 T0569 T0569 T0569
First score First Z-score Best score Best Z-score
1 TS386 76.5820 71.3080 2.2196 2.2886 78.4810 72.4680 2.3346 2.3624 TS386 1
2 TS240 75.6330 68.8820 2.1622 2.1343 75.6330 68.8820 2.1622 2.1343 TS240 2
3 TS399 75.6330 68.8820 2.1622 2.1343 75.6330 68.8820 2.1622 2.1343 TS399 3
4 TS321 75.6330 68.6710 2.1622 2.1209 75.6330 68.6710 2.1622 2.1209 TS321 4
5 TS172 73.1010 63.1860 2.0089 1.7722 78.4810 72.1520 2.3346 2.3423 TS172 5
6 TS291 71.5190 63.7130 1.9132 1.8057 71.5190 63.7130 1.9132 1.8057 TS291 6
7 TS407 70.8860 63.2910 1.8749 1.7788 71.8350 66.1390 1.9323 1.9599 TS407 7
8 TS028 70.5700 62.3420 1.8557 1.7185 70.5700 62.3420 1.8557 1.7185 TS028 8
9 TS117 67.7220 64.7680 1.6834 1.8727 68.6710 66.5610 1.7408 1.9868 TS117 9
10 TS113 67.7220 59.9160 1.6834 1.5642 70.8860 66.3500 1.8749 1.9733 TS113 10
11 TS127 67.4050 61.7090 1.6642 1.6782 71.5190 67.3000 1.9132 2.0337 TS127 11
12 TS037 67.4050 59.8100 1.6642 1.5575 75.6330 69.7260 2.1622 2.1880 TS037 12
13 TS481 67.0890 59.4940 1.6450 1.5374 68.9870 63.2910 1.7599 1.7788 TS481 13
14 TS470 67.0890 59.4940 1.6450 1.5374 70.5700 62.3420 1.8557 1.7185 TS470 14
15 TS149 66.4560 58.0170 1.6067 1.4435 66.4560 58.0170 1.6067 1.4435 TS149 15
16 TS018 64.5570 58.4390 1.4918 1.4703 64.5570 58.4390 1.4918 1.4703 TS018 16
17 TS402 63.9240 60.5490 1.4535 1.6045 75.6330 67.3000 2.1622 2.0337 TS402 17
18 TS382 63.9240 59.9160 1.4535 1.5642 73.7340 68.8820 2.0473 2.1343 TS382 18
19 TS035 63.6080 59.3880 1.4343 1.5307 63.6080 59.3880 1.4343 1.5307 TS035 19
20 TS060 63.6080 59.3880 1.4343 1.5307 63.6080 59.3880 1.4343 1.5307 TS060 20
21 TS061 62.0250 58.8610 1.3385 1.4972 65.1900 59.2830 1.5301 1.5240 TS061 21
22 TS096 61.0760 57.0680 1.2811 1.3831 64.5570 58.0170 1.4918 1.4435 TS096 22
23 TS104 60.4430 57.2780 1.2428 1.3965 60.4430 57.2780 1.2428 1.3965 TS104 23
24 TS077 59.8100 56.0130 1.2044 1.3161 59.8100 56.0130 1.2044 1.3161 TS077 24
25 TS286 59.8100 56.0130 1.2044 1.3161 59.8100 56.0130 1.2044 1.3161 TS286 25
26 TS457 59.4940 55.6960 1.1853 1.2959 59.4940 55.6960 1.1853 1.2959 TS457 26
27 TS166 59.4940 54.0080 1.1853 1.1886 59.4940 54.0080 1.1853 1.1886 TS166 27
28 TS119 59.1770 57.0680 1.1661 1.3831 59.1770 57.0680 1.1661 1.3831 TS119 28
29 TS409 59.1770 56.4350 1.1661 1.3429 59.1770 56.4350 1.1661 1.3429 TS409 29
30 TS365 59.1770 50.7380 1.1661 0.9807 59.4940 51.8990 1.1853 1.0545 TS365 30
31 TS215 58.8610 55.9070 1.1470 1.3093 58.8610 55.9070 1.1470 1.3093 TS215 31
32 TS476 58.8610 55.6960 1.1470 1.2959 58.8610 55.6960 1.1470 1.2959 TS476 32
33 TS171 58.8610 55.6960 1.1470 1.2959 58.8610 55.6960 1.1470 1.2959 TS171 33
34 TS276 58.8610 54.4300 1.1470 1.2154 58.8610 54.4300 1.1470 1.2154 TS276 34
35 TS477 58.8610 54.4300 1.1470 1.2154 58.8610 54.4300 1.1470 1.2154 TS477 35
36 TS174 58.5440 56.6460 1.1278 1.3563 58.5440 56.6460 1.1278 1.3563 TS174 36
37 TS110 58.5440 56.6460 1.1278 1.3563 58.5440 56.6460 1.1278 1.3563 TS110 37
38 TS360 58.5440 53.6920 1.1278 1.1685 58.5440 53.6920 1.1278 1.1685 TS360 38
39 TS302 57.5950 46.4140 1.0704 0.7057 57.5950 46.4140 1.0704 0.7057 TS302 39
40 TS142 57.5950 46.4140 1.0704 0.7057 57.5950 46.4140 1.0704 0.7057 TS142 40
41 TS080 56.9620 50.6330 1.0321 0.9740 60.1270 57.3840 1.2236 1.4032 TS080 41
42 TS045 56.6460 52.0040 1.0129 1.0612 56.6460 52.0040 1.0129 1.0612 TS045 42
43 TS002 56.6460 49.4730 1.0129 0.9002 60.1270 57.3840 1.2236 1.4032 TS002 43
44 TS103 55.6960 47.4680 0.9554 0.7727 61.3920 56.5400 1.3002 1.3496 TS103 44
45 TS449 55.0630 51.0550 0.9171 1.0008 55.0630 51.0550 0.9171 1.0008 TS449 45
46 TS453 55.0630 51.0550 0.9171 1.0008 55.0630 51.0550 0.9171 1.0008 TS453 46
47 TS346 55.0630 51.0550 0.9171 1.0008 55.0630 51.0550 0.9171 1.0008 TS346 47
48 TS429 54.1140 51.1600 0.8597 1.0075 74.0510 69.4090 2.0664 2.1678 TS429 48
49 TS033 54.1140 48.2070 0.8597 0.8197 54.1140 48.2070 0.8597 0.8197 TS033 49
50 TS395 53.4810 49.8950 0.8214 0.9271 56.3290 54.0080 0.9937 1.1886 TS395 50
51 TS304 51.5820 44.4090 0.7064 0.5782 51.5820 44.4090 0.7064 0.5782 TS304 51
52 TS088 51.2660 44.9370 0.6873 0.6118 51.2660 44.9370 0.6873 0.6118 TS088 52
53 TS165 50.9490 46.3080 0.6681 0.6990 50.9490 49.8950 0.6681 0.9271 TS165 53
54 TS170 50.9490 45.6750 0.6681 0.6587 50.9490 45.6750 0.6681 0.6587 TS170 54
55 TS273 50.9490 44.4090 0.6681 0.5782 50.9490 45.5700 0.6681 0.6521 TS273 55
56 TS001 50.9490 44.4090 0.6681 0.5782 50.9490 44.4090 0.6681 0.5782 TS001 56
57 TS094 50.6330 48.5230 0.6490 0.8398 50.6330 48.5230 0.6490 0.8398 TS094 57
58 TS102 50.6330 48.5230 0.6490 0.8398 50.6330 48.5230 0.6490 0.8398 TS102 58
59 TS361 50.6330 48.5230 0.6490 0.8398 60.7590 58.1220 1.2619 1.4502 TS361 59
60 TS275 50.3160 46.9410 0.6298 0.7392 68.9870 63.7130 1.7599 1.8057 TS275 60
61 TS423 50.0000 43.8820 0.6106 0.5447 51.2660 47.8900 0.6873 0.7996 TS423 61
62 TS297 49.6840 44.4090 0.5915 0.5782 49.6840 44.4090 0.5915 0.5782 TS297 62
63 TS490 49.3670 46.8350 0.5723 0.7325 49.6840 46.9410 0.5915 0.7392 TS490 63
64 TS208 49.3670 46.2030 0.5723 0.6923 49.6840 46.6240 0.5915 0.7191 TS208 64
65 TS056 49.3670 45.5700 0.5723 0.6521 50.6330 48.3120 0.6490 0.8264 TS056 65
66 TS300 49.3670 37.5530 0.5723 0.1423 59.4940 55.6960 1.1853 1.2959 TS300 66
67 TS192 48.7340 42.8270 0.5340 0.4776 48.7340 42.8270 0.5340 0.4776 TS192 67
68 TS016 48.4180 43.3540 0.5149 0.5112 48.4180 43.3540 0.5149 0.5112 TS016 68
69 TS218 48.1010 46.4140 0.4957 0.7057 48.7340 47.4680 0.5340 0.7727 TS218 69
70 TS418 48.1010 44.9370 0.4957 0.6118 75.0000 68.2490 2.1239 2.0941 TS418 70
71 TS420 48.1010 43.8820 0.4957 0.5447 48.1010 43.8820 0.4957 0.5447 TS420 71
72 TS471 48.1010 43.8820 0.4957 0.5447 48.1010 43.8820 0.4957 0.5447 TS471 72
73 TS428 48.1010 42.8270 0.4957 0.4776 60.4430 53.2700 1.2428 1.1417 TS428 73
74 TS408 48.1010 39.0300 0.4957 0.2362 65.1900 62.4470 1.5301 1.7252 TS408 74
75 TS380 48.1010 38.6080 0.4957 0.2094 49.0510 44.4090 0.5532 0.5782 TS380 75
76 TS282 47.7850 45.4640 0.4766 0.6453 47.7850 45.4640 0.4766 0.6453 TS282 76
77 TS173 47.7850 41.2450 0.4766 0.3771 50.0000 46.2030 0.6106 0.6923 TS173 77
78 TS419 47.4680 45.3590 0.4574 0.6386 59.4940 54.0080 1.1853 1.1886 TS419 78
79 TS009 46.5190 41.6670 0.3999 0.4039 46.5190 41.6670 0.3999 0.4039 TS009 79
80 TS319 46.2030 43.2490 0.3808 0.5045 50.6330 48.3120 0.6490 0.8264 TS319 80
81 AL285 45.8860 43.9870 0.3616 0.5514 45.8860 43.9870 0.3616 0.5514 AL285 81
82 TS400 45.8860 36.8140 0.3616 0.0953 45.8860 36.8140 0.3616 0.0953 TS400 82
83 TS484 45.2530 38.2910 0.3233 0.1892 47.1520 38.2910 0.4383 0.1892 TS484 83
84 TS245 45.2530 34.4940 0.3233 -0.0522 45.2530 34.4940 0.3233 -0.0522 TS245 84
85 TS299 43.3540 36.8140 0.2084 0.0953 43.3540 36.8140 0.2084 0.0953 TS299 85
86 TS391 43.0380 35.8650 0.1892 0.0350 43.0380 35.8650 0.1892 0.0350 TS391 86
87 TS253 42.4050 37.7640 0.1509 0.1557 47.4680 38.1860 0.4574 0.1825 TS253 87
88 TS353 42.0890 38.5020 0.1318 0.2026 44.9370 40.2950 0.3042 0.3166 TS353 88
89 AL396 42.0890 37.8690 0.1318 0.1624 56.3290 53.1650 0.9937 1.1350 AL396 89
90 TS129 41.7720 37.7640 0.1126 0.1557 44.9370 39.8730 0.3042 0.2898 TS129 90
91 TS296 40.5060 36.2870 0.0360 0.0618 50.9490 44.4090 0.6681 0.5782 TS296 91
92 TS147 40.5060 33.7550 0.0360 -0.0992 50.9490 42.3000 0.6681 0.4441 TS147 92
93 TS345 39.5570 35.1270 -0.0215 -0.0120 42.4050 35.1270 0.1509 -0.0120 TS345 93
94 TS452 38.6080 33.9660 -0.0789 -0.0858 38.6080 33.9660 -0.0789 -0.0858 TS452 94
95 TS242 37.6580 28.1650 -0.1364 -0.4546 37.9750 28.1650 -0.1172 -0.4546 TS242 95
96 TS213 36.7090 30.1690 -0.1939 -0.3272 39.2410 31.4350 -0.0406 -0.2467 TS213 96
97 TS182 34.1770 30.4850 -0.3471 -0.3071 34.1770 30.4850 -0.3471 -0.3071 TS182 97
98 TS435 33.5440 27.2150 -0.3854 -0.5150 33.5440 27.2150 -0.3854 -0.5150 TS435 98
99 TS355 31.6460 27.4260 -0.5003 -0.5016 31.6460 27.4260 -0.5003 -0.5016 TS355 99
100 TS055 31.3290 25.0000 -0.5195 -0.6559 33.8610 26.5820 -0.3662 -0.5553 TS055 100
101 TS042 30.6960 26.0550 -0.5578 -0.5888 32.5950 28.9030 -0.4429 -0.4077 TS042 101
102 TS366 29.1140 24.6840 -0.6536 -0.6760 30.6960 28.3760 -0.5578 -0.4412 TS366 102
103 TS063 29.1140 24.6840 -0.6536 -0.6760 30.6960 28.3760 -0.5578 -0.4412 TS063 103
104 TS153 29.1140 24.0510 -0.6536 -0.7162 29.1140 24.0510 -0.6536 -0.7162 TS153 104
105 TS373 28.7970 23.7340 -0.6728 -0.7364 31.9620 26.4770 -0.4812 -0.5620 TS373 105
106 TS316 28.1650 26.0550 -0.7110 -0.5888 32.5950 28.9030 -0.4429 -0.4077 TS316 106
107 TS029 28.1650 24.7890 -0.7110 -0.6693 40.8230 38.2910 0.0552 0.1892 TS029 107
108 TS257 27.5320 23.5230 -0.7493 -0.7498 27.5320 23.5230 -0.7493 -0.7498 TS257 108
109 TS020 27.5320 19.7260 -0.7493 -0.9912 31.0130 24.6840 -0.5386 -0.6760 TS020 109
110 TS229 26.8990 25.8440 -0.7877 -0.6022 30.0630 27.1100 -0.5961 -0.5217 TS229 110
111 TS186 26.8990 20.7810 -0.7877 -0.9241 27.8480 21.5190 -0.7302 -0.8772 TS186 111
112 TS424 26.5820 23.8400 -0.8068 -0.7296 49.3670 39.4510 0.5723 0.2630 TS424 112
113 TS047 26.5820 19.3040 -0.8068 -1.0181 26.5820 19.3040 -0.8068 -1.0181 TS047 113
114 TS264 26.2660 24.1560 -0.8260 -0.7095 28.7970 24.5780 -0.6728 -0.6827 TS264 114
115 TS295 25.9490 24.4730 -0.8452 -0.6894 35.7590 27.3210 -0.2514 -0.5083 TS295 115
116 TS450 25.9490 24.2620 -0.8452 -0.7028 25.9490 24.2620 -0.8452 -0.7028 TS450 116
117 TS324 25.9490 24.2620 -0.8452 -0.7028 27.5320 24.2620 -0.7493 -0.7028 TS324 117
118 TS311 25.9490 21.6240 -0.8452 -0.8705 27.5320 22.3630 -0.7493 -0.8235 TS311 118
119 TS214 25.9490 20.6750 -0.8452 -0.9309 27.5320 22.0460 -0.7493 -0.8437 TS214 119
120 TS244 25.6330 18.8820 -0.8643 -1.0449 58.5440 54.1140 1.1278 1.1953 TS244 120
121 TS278 25.3160 22.7850 -0.8835 -0.7967 25.3160 22.7850 -0.8835 -0.7967 TS278 121
122 TS084 25.3160 22.3630 -0.8835 -0.8235 32.5950 26.6880 -0.4429 -0.5485 TS084 122
123 TS289 25.3160 22.0460 -0.8835 -0.8437 25.3160 22.0460 -0.8835 -0.8437 TS289 123
124 TS026 24.6840 20.0420 -0.9217 -0.9711 24.6840 21.8350 -0.9217 -0.8571 TS026 124
125 TS350 24.3670 19.9370 -0.9409 -0.9778 26.8990 25.4220 -0.7877 -0.6290 TS350 125
126 TS160 24.0510 21.9410 -0.9600 -0.8504 25.9490 22.5740 -0.8452 -0.8101 TS160 126
127 TS086 23.7340 21.9410 -0.9792 -0.8504 23.7340 21.9410 -0.9792 -0.8504 TS086 127
128 TS014 23.7340 20.1480 -0.9792 -0.9644 24.3670 20.1480 -0.9409 -0.9644 TS014 128
129 TS322 23.7340 19.5150 -0.9792 -1.0046 25.0000 21.8350 -0.9026 -0.8571 TS322 129
130 TS444 23.4180 21.3080 -0.9984 -0.8906 27.5320 24.3670 -0.7493 -0.6961 TS444 130
131 TS328 23.4180 20.8860 -0.9984 -0.9175 23.4180 20.8860 -0.9984 -0.9175 TS328 131
132 TS236 23.4180 20.4640 -0.9984 -0.9443 27.5320 23.8400 -0.7493 -0.7296 TS236 132
133 TS333 23.4180 18.7760 -0.9984 -1.0516 23.4180 18.7760 -0.9984 -1.0516 TS333 133
134 TS269 23.4180 18.5650 -0.9984 -1.0650 24.3670 20.3590 -0.9409 -0.9510 TS269 134
135 TS206 23.1010 20.3590 -1.0175 -0.9510 23.1010 20.3590 -1.0175 -0.9510 TS206 135
136 TS307 22.1520 20.1480 -1.0750 -0.9644 23.7340 20.1480 -0.9792 -0.9644 TS307 136
137 TS083 22.1520 20.0420 -1.0750 -0.9711 77.5320 71.4140 2.2772 2.2953 TS083 137
138 TS152 22.1520 19.1980 -1.0750 -1.0248 24.3670 20.3590 -0.9409 -0.9510 TS152 138
139 TS114 22.1520 18.6710 -1.0750 -1.0583 33.8610 30.3800 -0.3662 -0.3138 TS114 139
140 TS403 21.8350 20.3590 -1.0942 -0.9510 22.4680 20.3590 -1.0559 -0.9510 TS403 140
141 TS301 21.5190 20.0420 -1.1133 -0.9711 50.3160 47.9960 0.6298 0.8063 TS301 141
142 TS200 21.2030 19.6200 -1.1324 -0.9980 27.5320 23.8400 -0.7493 -0.7296 TS200 142
143 TS207 21.2030 18.0380 -1.1324 -1.0986 23.7340 21.8350 -0.9792 -0.8571 TS207 143
144 RANDOM 20.91 17.68 -1.1502 -1.1213 20.91 17.68 -1.1502 -1.1213 RANDOM 144
145 TS458 20.8860 18.7760 -1.1516 -1.0516 51.5820 48.5230 0.7064 0.8398 TS458 145
146 TS220 20.8860 17.4050 -1.1516 -1.1388 57.5950 46.4140 1.0704 0.7057 TS220 146
147 TS447 20.8860 17.4050 -1.1516 -1.1388 57.5950 46.4140 1.0704 0.7057 TS447 147
148 TS314 20.5700 16.4560 -1.1707 -1.1991 66.4560 58.0170 1.6067 1.4435 TS314 148
149 TS433 19.9370 17.7220 -1.2091 -1.1186 23.7340 19.9370 -0.9792 -0.9778 TS433 149
150 TS331 19.9370 17.7220 -1.2091 -1.1186 22.4680 18.6710 -1.0559 -1.0583 TS331 150
151 TS248 19.6200 17.9320 -1.2282 -1.1053 19.6200 18.1430 -1.2282 -1.0919 TS248 151
152 TS039 19.6200 17.6160 -1.2282 -1.1254 23.7340 21.9410 -0.9792 -0.8504 TS039 152
153 TS461 19.3040 16.9830 -1.2474 -1.1656 23.7340 18.7760 -0.9792 -1.0516 TS461 153
154 TS140 19.3040 16.6670 -1.2474 -1.1857 25.0000 21.8350 -0.9026 -0.8571 TS140 154
155 TS250 18.0380 16.4560 -1.3240 -1.1991 18.6710 16.6670 -1.2857 -1.1857 TS250 155
156 TS044             -1.1502 -1.1213             -1.1502 -1.1213 TS044 156
157 TS074             -1.1502 -1.1213             -1.1502 -1.1213 TS074 157
158 TS075             -1.1502 -1.1213             -1.1502 -1.1213 TS075 158
159 TS105             -1.1502 -1.1213             -1.1502 -1.1213 TS105 159
160 TS150             -1.1502 -1.1213             -1.1502 -1.1213 TS150 160
161 TS154             -1.1502 -1.1213             -1.1502 -1.1213 TS154 161
162 TS178             -1.1502 -1.1213             -1.1502 -1.1213 TS178 162
163 TS180             -1.1502 -1.1213             -1.1502 -1.1213 TS180 163
164 TS184             -1.1502 -1.1213             -1.1502 -1.1213 TS184 164
165 TS189             -1.1502 -1.1213             -1.1502 -1.1213 TS189 165
166 TS199             -1.1502 -1.1213             -1.1502 -1.1213 TS199 166
167 TS228             -1.1502 -1.1213             -1.1502 -1.1213 TS228 167
168 TS254             -1.1502 -1.1213             -1.1502 -1.1213 TS254 168
169 TS261             -1.1502 -1.1213             -1.1502 -1.1213 TS261 169
170 TS263             -1.1502 -1.1213             -1.1502 -1.1213 TS263 170
171 TS279             -1.1502 -1.1213             -1.1502 -1.1213 TS279 171
172 TS330             -1.1502 -1.1213             -1.1502 -1.1213 TS330 172
173 TS336             -1.1502 -1.1213             -1.1502 -1.1213 TS336 173
174 TS347             -1.1502 -1.1213             -1.1502 -1.1213 TS347 174
175 TS358             -1.1502 -1.1213             -1.1502 -1.1213 TS358 175
176 TS362             -1.1502 -1.1213             -1.1502 -1.1213 TS362 176
177 TS436             -1.1502 -1.1213             -1.1502 -1.1213 TS436 177
178 TS439             -1.1502 -1.1213             -1.1502 -1.1213 TS439 178