T0620

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0620

INPPL1B from Homo Sapiens

Target type: Server only

Target sequence:

>T0620 INPPL1B, Homo Sapiens, 312 residues
EPDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFEVGVTS

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: SGC
PDB ID: 3nr8

Jmol of T0620 structure : 3nr8

PyMOL of T0620

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0620A422-7313-312
T0620B420-7311-312

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

DNase I-like, contains beta-sandwich; duplication of alpha+beta motif.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

1i9z_A | PyMOL of 1i9z A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Endonuclease/Exonuclease/phosphatase family (PF03372).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0620 T0620 T0620 T0620
First score First Z-score Best score Best Z-score
1 TS104 87.5430 84.4710 0.7883 0.9116 87.5430 84.4710 0.7883 0.9116 TS104 1
2 TS470 87.4570 85.0110 0.7827 0.9452 87.4570 85.0110 0.7827 0.9452 TS470 2
3 TS449 87.4570 85.0110 0.7827 0.9452 87.4570 85.0110 0.7827 0.9452 TS449 3
4 TS453 87.4570 85.0110 0.7827 0.9452 87.4570 85.0110 0.7827 0.9452 TS453 4
5 TS346 87.4570 85.0110 0.7827 0.9452 87.4570 85.0110 0.7827 0.9452 TS346 5
6 TS094 86.8600 81.0010 0.7443 0.6959 86.8600 82.9350 0.7443 0.8161 TS094 6
7 TS119 86.7750 78.8680 0.7388 0.5633 86.8600 82.5370 0.7443 0.7914 TS119 7
8 TS361 86.6890 80.7740 0.7333 0.6818 87.0310 83.5040 0.7553 0.8515 TS361 8
9 TS407 86.6040 83.4760 0.7278 0.8497 86.7750 83.4760 0.7388 0.8497 TS407 9
10 TS215 85.9220 80.6880 0.6839 0.6765 85.9220 82.0820 0.6839 0.7631 TS215 10
11 TS481 85.9220 80.1190 0.6839 0.6411 86.2630 81.9970 0.7059 0.7578 TS481 11
12 TS490 85.8360 78.5550 0.6784 0.5439 86.0920 83.3050 0.6948 0.8391 TS490 12
13 TS077 85.7510 81.5420 0.6729 0.7295 85.7510 81.5420 0.6729 0.7295 TS077 13
14 TS018 85.6660 82.3090 0.6674 0.7772 85.6660 82.3090 0.6674 0.7772 TS018 14
15 TS476 85.5800 80.5180 0.6619 0.6659 85.5800 80.5180 0.6619 0.6659 TS476 15
16 TS028 85.5800 78.9820 0.6619 0.5704 85.5800 78.9820 0.6619 0.5704 TS028 16
17 TS174 85.4950 83.2760 0.6564 0.8373 85.4950 83.2760 0.6564 0.8373 TS174 17
18 TS429 85.3240 83.1630 0.6454 0.8303 86.3480 83.1630 0.7113 0.8303 TS429 18
19 TS291 85.3240 82.7080 0.6454 0.8020 85.3240 82.7080 0.6454 0.8020 TS291 19
20 TS080 85.3240 81.5130 0.6454 0.7277 86.6890 82.9350 0.7333 0.8161 TS080 20
21 TS035 85.2390 79.6080 0.6399 0.6093 85.2390 79.6080 0.6399 0.6093 TS035 21
22 TS314 85.2390 77.6730 0.6399 0.4891 85.2390 77.6730 0.6399 0.4891 TS314 22
23 TS208 85.1540 82.5370 0.6345 0.7914 85.1540 82.5370 0.6345 0.7914 TS208 23
24 TS037 84.9830 81.5130 0.6234 0.7277 85.4100 81.5980 0.6509 0.7330 TS037 24
25 TS113 84.8120 79.4080 0.6124 0.5969 86.7750 81.5980 0.7388 0.7330 TS113 25
26 TS218 84.7270 83.0200 0.6070 0.8214 84.9830 83.3330 0.6234 0.8409 TS218 26
27 TS435 84.7270 82.6790 0.6070 0.8002 84.7270 82.6790 0.6070 0.8002 TS435 27
28 TS002 84.7270 82.1100 0.6070 0.7648 86.6890 83.4470 0.7333 0.8479 TS002 28
29 TS307 84.5560 81.7690 0.5960 0.7437 84.9830 81.7690 0.6234 0.7437 TS307 29
30 TS276 84.5560 79.0390 0.5960 0.5740 84.5560 79.2380 0.5960 0.5863 TS276 30
31 TS286 84.5560 79.0390 0.5960 0.5740 84.5560 79.2380 0.5960 0.5863 TS286 31
32 TS296 84.5560 78.1850 0.5960 0.5209 84.7270 81.8830 0.6070 0.7507 TS296 32
33 TS304 84.3860 78.9250 0.5850 0.5669 84.3860 78.9250 0.5850 0.5669 TS304 33
34 TS420 84.3860 77.0480 0.5850 0.4502 84.9830 79.3520 0.6234 0.5934 TS420 34
35 TS471 84.3860 77.0480 0.5850 0.4502 84.9830 79.3520 0.6234 0.5934 TS471 35
36 TS074 84.3000 81.5130 0.5795 0.7277 84.3000 81.5130 0.5795 0.7277 TS074 36
37 TS063 84.3000 79.4650 0.5795 0.6005 84.3000 79.4650 0.5795 0.6005 TS063 37
38 TS253 84.1300 80.1480 0.5685 0.6429 84.1300 80.1480 0.5685 0.6429 TS253 38
39 TS114 84.1300 75.1420 0.5685 0.3318 84.1300 78.3280 0.5685 0.5298 TS114 39
40 TS302 84.0440 80.1760 0.5630 0.6446 84.0440 80.1760 0.5630 0.6446 TS302 40
41 TS142 84.0440 80.1760 0.5630 0.6446 84.0440 80.1760 0.5630 0.6446 TS142 41
42 TS220 84.0440 80.1760 0.5630 0.6446 84.0440 80.1760 0.5630 0.6446 TS220 42
43 TS447 84.0440 80.1760 0.5630 0.6446 84.0440 80.1760 0.5630 0.6446 TS447 43
44 TS419 84.0440 79.8350 0.5630 0.6234 84.0440 79.8350 0.5630 0.6234 TS419 44
45 TS166 84.0440 79.8350 0.5630 0.6234 84.0440 79.8350 0.5630 0.6234 TS166 45
46 TS117 84.0440 77.4460 0.5630 0.4750 84.0440 81.3140 0.5630 0.7154 TS117 46
47 TS236 83.7880 78.3280 0.5465 0.5298 84.3000 78.3280 0.5795 0.5298 TS236 47
48 TS102 83.6180 79.3520 0.5356 0.5934 84.3000 80.8870 0.5795 0.6888 TS102 48
49 TS129 83.5280 76.6160 0.5298 0.4234 84.2150 80.0060 0.5740 0.6341 TS129 49
50 TS001 83.4470 81.3990 0.5245 0.7207 85.1540 81.8830 0.6345 0.7507 TS001 50
51 TS457 83.3620 75.7390 0.5191 0.3689 83.3620 75.7390 0.5191 0.3689 TS457 51
52 TS056 82.9350 76.2800 0.4916 0.4025 82.9350 78.0150 0.4916 0.5103 TS056 52
53 TS273 82.9350 76.2800 0.4916 0.4025 85.1540 81.8830 0.6345 0.7507 TS273 53
54 TS088 82.5090 75.8530 0.4642 0.3760 82.6790 77.0760 0.4751 0.4520 TS088 54
55 TS103 82.4230 79.6930 0.4586 0.6146 82.4230 79.6930 0.4586 0.6146 TS103 55
56 AL396 81.7410 79.0670 0.4147 0.5757 81.7410 79.0670 0.4147 0.5757 AL396 56
57 TS452 81.2290 78.7830 0.3817 0.5581 84.1300 81.3990 0.5685 0.7207 TS452 57
58 TS055 81.1430 75.9670 0.3762 0.3830 83.3620 79.0390 0.5191 0.5740 TS055 58
59 TS319 80.9730 73.3500 0.3653 0.2204 85.1540 80.1190 0.6345 0.6411 TS319 59
60 TS245 80.6310 77.3890 0.3432 0.4714 80.6310 77.3890 0.3432 0.4714 TS245 60
61 TS428 80.3750 77.0760 0.3268 0.4520 84.4480 82.0510 0.5890 0.7612 TS428 61
62 TS165 80.2900 76.8200 0.3213 0.4361 83.0200 77.2750 0.4971 0.4643 TS165 62
63 TS228 80.1190 73.8620 0.3103 0.2522 83.2760 80.2900 0.5135 0.6517 TS228 63
64 TS127 79.9490 76.7060 0.2993 0.4290 84.9830 81.9400 0.6234 0.7543 TS127 64
65 TS026 79.9490 74.6020 0.2993 0.2982 84.0440 81.8830 0.5630 0.7507 TS026 65
66 TS380 79.8630 75.0280 0.2938 0.3247 85.5800 80.8590 0.6619 0.6871 TS380 66
67 TS395 79.7780 74.2320 0.2883 0.2752 79.9490 75.9100 0.2993 0.3795 TS395 67
68 TS409 79.1810 73.0940 0.2499 0.2045 80.3750 73.0940 0.3268 0.2045 TS409 68
69 TS047 79.1810 72.4120 0.2499 0.1621 79.1810 72.4120 0.2499 0.1621 TS047 69
70 TS275 79.0960 74.7160 0.2444 0.3053 80.8020 77.5600 0.3542 0.4821 TS275 70
71 TS366 78.7540 73.5780 0.2224 0.2346 78.7540 73.5780 0.2224 0.2346 TS366 71
72 TS213 78.4980 72.1270 0.2059 0.1444 84.2150 80.2330 0.5740 0.6482 TS213 72
73 TS207 77.7300 73.5210 0.1565 0.2310 78.2420 74.2610 0.1894 0.2770 TS207 73
74 TS436 77.1330 64.3340 0.1180 -0.3400 77.1330 64.3340 0.1180 -0.3400 TS436 74
75 TS321 76.7060 69.0270 0.0905 -0.0483 81.8560 75.1670 0.4221 0.3333 TS321 75
76 TS328 76.1090 72.9810 0.0521 0.1975 76.1090 72.9810 0.0521 0.1975 TS328 76
77 AL285 75.7680 66.7800 0.0301 -0.1880 75.7680 66.7800 0.0301 -0.1880 AL285 77
78 TS189 75.6690 71.2100 0.0238 0.0874 75.6690 72.5540 0.0238 0.1709 TS189 78
79 TS289 75.4270 71.1600 0.0082 0.0843 75.4270 71.1600 0.0082 0.0843 TS289 79
80 TS391 74.4030 67.2920 -0.0578 -0.1561 74.4030 67.2920 -0.0578 -0.1561 TS391 80
81 TS173 72.3550 63.7090 -0.1896 -0.3788 85.1540 78.7830 0.6345 0.5581 TS173 81
82 TS214 68.5620 62.4300 -0.4338 -0.4583 69.1980 62.4300 -0.3929 -0.4583 TS214 82
83 TS171 66.8940 57.6220 -0.5412 -0.7572 66.8940 57.6220 -0.5412 -0.7572 TS171 83
84 TS248 62.5430 54.4650 -0.8214 -0.9534 63.1400 55.7450 -0.7829 -0.8738 TS248 84
85 TS244 62.4580 54.2640 -0.8268 -0.9659 74.8290 66.5240 -0.0303 -0.2039 TS244 85
86 TS257 9.8120 8.8170 -4.2165 -3.7905 13.3110 11.1490 -3.9912 -3.6456 TS257 86
87 TS014 9.5560 7.9640 -4.2329 -3.8436 10.7860 9.0160 -4.1537 -3.7782 TS014 87
88 TS355 9.3860 8.6460 -4.2439 -3.8012 10.7860 9.0020 -4.1537 -3.7790 TS355 88
89 RANDOM 9.11 7.63 -4.2617 -3.8643 9.11 7.63 -4.2617 -3.8643 RANDOM 89
90 TS264 9.0440 8.3050 -4.2659 -3.8224 9.0440 8.3050 -4.2659 -3.8224 TS264 90
91 TS350 8.6180 8.2200 -4.2933 -3.8276 9.2150 8.4760 -4.2549 -3.8117 TS350 91
92 TS229 6.2710 5.7410 -4.4444 -3.9817 7.2530 6.5420 -4.3812 -3.9319 TS229 92
93 TS009             -4.2617 -3.8643             -4.2617 -3.8643 TS009 93
94 TS016             -4.2617 -3.8643             -4.2617 -3.8643 TS016 94
95 TS020             -4.2617 -3.8643             -4.2617 -3.8643 TS020 95
96 TS029             -4.2617 -3.8643             -4.2617 -3.8643 TS029 96
97 TS033             -4.2617 -3.8643             -4.2617 -3.8643 TS033 97
98 TS039             -4.2617 -3.8643             -4.2617 -3.8643 TS039 98
99 TS042             -4.2617 -3.8643             -4.2617 -3.8643 TS042 99
100 TS044             -4.2617 -3.8643             -4.2617 -3.8643 TS044 100
101 TS045             -4.2617 -3.8643             -4.2617 -3.8643 TS045 101
102 TS060             -4.2617 -3.8643             -4.2617 -3.8643 TS060 102
103 TS061             -4.2617 -3.8643             -4.2617 -3.8643 TS061 103
104 TS075             -4.2617 -3.8643             -4.2617 -3.8643 TS075 104
105 TS083             -4.2617 -3.8643             -4.2617 -3.8643 TS083 105
106 TS084             -4.2617 -3.8643             -4.2617 -3.8643 TS084 106
107 TS086             -4.2617 -3.8643             -4.2617 -3.8643 TS086 107
108 TS096             -4.2617 -3.8643             -4.2617 -3.8643 TS096 108
109 TS105             -4.2617 -3.8643             -4.2617 -3.8643 TS105 109
110 TS110             -4.2617 -3.8643             -4.2617 -3.8643 TS110 110
111 TS140             -4.2617 -3.8643             -4.2617 -3.8643 TS140 111
112 TS147             -4.2617 -3.8643             -4.2617 -3.8643 TS147 112
113 TS149             -4.2617 -3.8643             -4.2617 -3.8643 TS149 113
114 TS150             -4.2617 -3.8643             -4.2617 -3.8643 TS150 114
115 TS152             -4.2617 -3.8643             -4.2617 -3.8643 TS152 115
116 TS153             -4.2617 -3.8643             -4.2617 -3.8643 TS153 116
117 TS154             -4.2617 -3.8643             -4.2617 -3.8643 TS154 117
118 TS160             -4.2617 -3.8643             -4.2617 -3.8643 TS160 118
119 TS170             -4.2617 -3.8643             -4.2617 -3.8643 TS170 119
120 TS172             -4.2617 -3.8643             -4.2617 -3.8643 TS172 120
121 TS178             -4.2617 -3.8643             -4.2617 -3.8643 TS178 121
122 TS180             -4.2617 -3.8643             -4.2617 -3.8643 TS180 122
123 TS182             -4.2617 -3.8643             -4.2617 -3.8643 TS182 123
124 TS184             -4.2617 -3.8643             -4.2617 -3.8643 TS184 124
125 TS186             -4.2617 -3.8643             -4.2617 -3.8643 TS186 125
126 TS192             -4.2617 -3.8643             -4.2617 -3.8643 TS192 126
127 TS199             -4.2617 -3.8643             -4.2617 -3.8643 TS199 127
128 TS200             -4.2617 -3.8643             -4.2617 -3.8643 TS200 128
129 TS206             -4.2617 -3.8643             -4.2617 -3.8643 TS206 129
130 TS240             -4.2617 -3.8643             -4.2617 -3.8643 TS240 130
131 TS242             -4.2617 -3.8643             -4.2617 -3.8643 TS242 131
132 TS250             -4.2617 -3.8643             -0.8591 -1.0282 TS250 132
133 TS254             -4.2617 -3.8643             -4.2617 -3.8643 TS254 133
134 TS261             -4.2617 -3.8643             -4.2617 -3.8643 TS261 134
135 TS263             -4.2617 -3.8643             -4.2617 -3.8643 TS263 135
136 TS269             -4.2617 -3.8643             -4.2617 -3.8643 TS269 136
137 TS278             -4.2617 -3.8643             -4.2617 -3.8643 TS278 137
138 TS279             -4.2617 -3.8643             -4.2617 -3.8643 TS279 138
139 TS282             -4.2617 -3.8643             -4.2617 -3.8643 TS282 139
140 TS295             -4.2617 -3.8643             -4.2617 -3.8643 TS295 140
141 TS297             -4.2617 -3.8643             -4.2617 -3.8643 TS297 141
142 TS299             -4.2617 -3.8643             -4.2617 -3.8643 TS299 142
143 TS300             -4.2617 -3.8643             -4.2617 -3.8643 TS300 143
144 TS301             -4.2617 -3.8643             -4.2617 -3.8643 TS301 144
145 TS311             -4.2617 -3.8643             -4.2617 -3.8643 TS311 145
146 TS316             -4.2617 -3.8643             -4.2617 -3.8643 TS316 146
147 TS322             -4.2617 -3.8643             -4.2617 -3.8643 TS322 147
148 TS324             -4.2617 -3.8643             -4.2617 -3.8643 TS324 148
149 TS330             -4.2617 -3.8643             -4.2617 -3.8643 TS330 149
150 TS331             -4.2617 -3.8643             -4.2617 -3.8643 TS331 150
151 TS333             -4.2617 -3.8643             -4.2617 -3.8643 TS333 151
152 TS336             -4.2617 -3.8643             -4.2617 -3.8643 TS336 152
153 TS345             -4.2617 -3.8643             -4.2617 -3.8643 TS345 153
154 TS347             -4.2617 -3.8643             -4.2617 -3.8643 TS347 154
155 TS353             -4.2617 -3.8643             -4.2617 -3.8643 TS353 155
156 TS358             -4.2617 -3.8643             -4.2617 -3.8643 TS358 156
157 TS360             -4.2617 -3.8643             -4.2617 -3.8643 TS360 157
158 TS362             -4.2617 -3.8643             -4.2617 -3.8643 TS362 158
159 TS365             -4.2617 -3.8643             -4.2617 -3.8643 TS365 159
160 TS373             -4.2617 -3.8643             -4.2617 -3.8643 TS373 160
161 TS382             -4.2617 -3.8643             -4.2617 -3.8643 TS382 161
162 TS386             -4.2617 -3.8643             -4.2617 -3.8643 TS386 162
163 TS399             -4.2617 -3.8643             -4.2617 -3.8643 TS399 163
164 TS400             -4.2617 -3.8643             -4.2617 -3.8643 TS400 164
165 TS402             -4.2617 -3.8643             -4.2617 -3.8643 TS402 165
166 TS403             -4.2617 -3.8643             -4.2617 -3.8643 TS403 166
167 TS408             -4.2617 -3.8643             -4.2617 -3.8643 TS408 167
168 TS418             -4.2617 -3.8643             -4.2617 -3.8643 TS418 168
169 TS423             -4.2617 -3.8643             -4.2617 -3.8643 TS423 169
170 TS424             -4.2617 -3.8643             -4.2617 -3.8643 TS424 170
171 TS433             -4.2617 -3.8643             -4.2617 -3.8643 TS433 171
172 TS439             -4.2617 -3.8643             -4.2617 -3.8643 TS439 172
173 TS444             -4.2617 -3.8643             -4.2617 -3.8643 TS444 173
174 TS450             -4.2617 -3.8643             -4.2617 -3.8643 TS450 174
175 TS458             -4.2617 -3.8643             -4.2617 -3.8643 TS458 175
176 TS461             -4.2617 -3.8643             -4.2617 -3.8643 TS461 176
177 TS477             -4.2617 -3.8643             -4.2617 -3.8643 TS477 177
178 TS484             -4.2617 -3.8643             -4.2617 -3.8643 TS484 178