T0598

Targets
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643      

T0598

3NJC from Bacillus subtilis

Target type: Human/Server

Target sequence:

>T0598 3NJC, Bacillus subtilis, 161 residues
MAGDPMKSKFEASIDNLKEIEMNAYAYGLIREIVLPDMLGQDYSSMMYWAGKHLARKFPLESWEEFPAFFEEAGWGTLTNVSAKKQELEFELEGPIISNRLKHQKEPCFQLEAGFIAEQIQLMNDQIAESYEQVKKRADKVVLTVKWDMKDPVLEHHHHHH

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HHsearch_pfamA.24.0, HorAServer, Dali Result

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: NESG
PDB ID: 3njc

Jmol of T0598 structure : 3njc

PyMOL of T0598

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0598A-7-1456-150
T0598B-2-1436-148

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

MJ1460-like,Ligand-binding domain in the NO signalling and Golgi transport.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

2oso_A | PyMOL of 2oso A

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

best match is DUF2507: Protein of unknown function (PF10702). SCOP mentions that C-terminal part corresponds to Pfam PF02830; V4R (vinyl 4 reductase) domain

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0598 T0598 T0598 T0598
First score First Z-score Best score Best Z-score
1 TS192 67.4830 57.5760 1.1456 1.4101 67.4830 57.5760 1.1456 1.4101 TS192 1
2 TS035 66.6080 59.8480 1.0954 1.5743 66.6080 59.8480 1.0954 1.5743 TS035 2
3 TS484 66.2590 59.2660 1.0754 1.5322 66.6080 60.4310 1.0954 1.6165 TS484 3
4 TS402 65.7340 53.8460 1.0454 1.1404 67.1330 56.0610 1.1255 1.3005 TS402 4
5 TS199 65.3850 56.4100 1.0254 1.3258 65.3850 56.4100 1.0254 1.3258 TS199 5
6 TS490 65.0350 50.1750 1.0053 0.8750 65.0350 50.2910 1.0053 0.8833 TS490 6
7 TS033 64.6850 45.5710 0.9852 0.5421 64.6850 45.5710 0.9852 0.5421 TS033 7
8 TS113 63.9860 52.5640 0.9452 1.0477 64.1610 56.2350 0.9552 1.3131 TS113 8
9 TS324 63.9860 50.3500 0.9452 0.8876 64.6850 54.7790 0.9852 1.2078 TS324 9
10 TS399 63.9860 49.4170 0.9452 0.8202 63.9860 56.2350 0.9452 1.3131 TS399 10
11 TS428 63.9860 49.4170 0.9452 0.8202 64.3360 49.4170 0.9652 0.8202 TS428 11
12 TS395 63.8110 61.3640 0.9352 1.6839 65.2100 61.3640 1.0153 1.6839 TS395 12
13 TS380 63.8110 56.2350 0.9352 1.3131 64.6850 56.2350 0.9852 1.3131 TS380 13
14 TS470 63.8110 56.2350 0.9352 1.3131 64.3360 56.2350 0.9652 1.3131 TS470 14
15 TS382 63.8110 55.7690 0.9352 1.2794 63.8110 55.7690 0.9352 1.2794 TS382 15
16 TS088 63.8110 51.5150 0.9352 0.9718 64.6850 57.2260 0.9852 1.3848 TS088 16
17 TS386 63.8110 48.5430 0.9352 0.7570 64.3360 48.8930 0.9652 0.7823 TS386 17
18 TS096 63.6360 54.5450 0.9251 1.1909 64.8600 54.5450 0.9953 1.1909 TS096 18
19 TS016 63.6360 51.5730 0.9251 0.9760 65.9090 52.7390 1.0554 1.0603 TS016 19
20 TS104 63.6360 49.4170 0.9251 0.8202 63.6360 49.4170 0.9251 0.8202 TS104 20
21 TS361 63.4620 51.2240 0.9152 0.9508 65.2100 54.3710 1.0153 1.1783 TS361 21
22 TS037 63.4620 49.5920 0.9152 0.8328 63.6360 56.0610 0.9251 1.3005 TS037 22
23 TS360 63.4620 47.3190 0.9152 0.6685 63.9860 54.3120 0.9452 1.1741 TS360 23
24 TS295 63.2870 54.7790 0.9051 1.2078 66.9580 58.4500 1.1155 1.4732 TS295 24
25 TS407 63.2870 44.5220 0.9051 0.4662 63.2870 50.8740 0.9051 0.9255 TS407 25
26 TS094 63.2870 44.1720 0.9051 0.4409 64.3360 51.6900 0.9652 0.9845 TS094 26
27 TS110 63.1120 52.2140 0.8951 1.0224 63.1120 52.2140 0.8951 1.0224 TS110 27
28 TS240 63.1120 51.1070 0.8951 0.9423 63.1120 51.1070 0.8951 0.9423 TS240 28
29 TS321 63.1120 51.1070 0.8951 0.9423 66.6080 59.8480 1.0954 1.5743 TS321 29
30 TS419 63.1120 51.1070 0.8951 0.9423 63.9860 51.1070 0.9452 0.9423 TS419 30
31 TS452 63.1120 48.4850 0.8951 0.7528 63.1120 48.4850 0.8951 0.7528 TS452 31
32 TS418 63.1120 47.4940 0.8951 0.6811 64.1610 52.2140 0.9552 1.0224 TS418 32
33 TS236 62.9370 51.6900 0.8851 0.9845 62.9370 51.6900 0.8851 0.9845 TS236 33
34 TS114 62.9370 51.6900 0.8851 0.9845 62.9370 51.6900 0.8851 0.9845 TS114 34
35 TS400 62.9370 49.3590 0.8851 0.8160 63.9860 54.0790 0.9452 1.1572 TS400 35
36 TS409 62.9370 48.7760 0.8851 0.7738 62.9370 48.7760 0.8851 0.7738 TS409 36
37 TS028 62.7620 47.3780 0.8750 0.6727 62.7620 47.3780 0.8750 0.6727 TS028 37
38 TS302 62.7620 47.3780 0.8750 0.6727 62.7620 47.3780 0.8750 0.6727 TS302 38
39 TS142 62.7620 47.3780 0.8750 0.6727 62.7620 47.3780 0.8750 0.6727 TS142 39
40 TS166 62.5870 50.7580 0.8650 0.9171 62.5870 50.7580 0.8650 0.9171 TS166 40
41 TS242 62.5870 47.9600 0.8650 0.7148 62.5870 47.9600 0.8650 0.7148 TS242 41
42 TS408 62.4130 51.8070 0.8550 0.9930 62.4130 51.8070 0.8550 0.9930 TS408 42
43 TS450 62.4130 47.1450 0.8550 0.6559 62.4130 47.1450 0.8550 0.6559 TS450 43
44 TS429 62.2380 48.5430 0.8450 0.7570 62.4130 50.2330 0.8550 0.8792 TS429 44
45 TS061 62.0630 50.2910 0.8350 0.8833 62.5870 50.2910 0.8650 0.8833 TS061 45
46 TS424 61.8880 53.2630 0.8250 1.0982 66.2590 53.7880 1.0754 1.1362 TS424 46
47 TS365 61.8880 48.5430 0.8250 0.7570 61.8880 48.5430 0.8250 0.7570 TS365 47
48 TS297 61.8880 45.1050 0.8250 0.5084 65.7340 50.1170 1.0454 0.8708 TS297 48
49 TS127 61.3640 50.3500 0.7949 0.8876 61.7130 51.0490 0.8149 0.9382 TS127 49
50 TS060 61.3640 50.3500 0.7949 0.8876 66.6080 59.8480 1.0954 1.5743 TS060 50
51 TS366 61.0140 47.0280 0.7749 0.6474 61.0140 47.0280 0.7749 0.6474 TS366 51
52 TS174 60.6640 49.8250 0.7548 0.8497 60.6640 49.8250 0.7548 0.8497 TS174 52
53 TS245 60.4900 48.9510 0.7448 0.7865 60.4900 48.9510 0.7448 0.7865 TS245 53
54 TS301 60.4900 43.9390 0.7448 0.4241 61.7130 47.4940 0.8149 0.6811 TS301 54
55 TS213 60.1400 49.8250 0.7248 0.8497 60.1400 49.8250 0.7248 0.8497 TS213 55
56 TS208 59.7900 44.7550 0.7047 0.4831 60.4900 48.0190 0.7448 0.7191 TS208 56
57 TS172 59.6150 54.8370 0.6947 1.2120 59.9650 54.8370 0.7148 1.2120 TS172 57
58 TS077 59.4410 47.6110 0.6847 0.6896 59.6150 48.4270 0.6947 0.7486 TS077 58
59 TS170 59.2660 53.6710 0.6747 1.1277 59.2660 53.6710 0.6747 1.1277 TS170 59
60 TS253 59.2660 49.8250 0.6747 0.8497 59.2660 49.8250 0.6747 0.8497 TS253 60
61 TS063 58.9160 45.2800 0.6546 0.5210 61.0140 47.0280 0.7749 0.6474 TS063 61
62 TS218 58.7410 48.1350 0.6446 0.7275 59.2660 48.1350 0.6747 0.7275 TS218 62
63 TS103 58.3920 51.9810 0.6246 1.0055 62.2380 51.9810 0.8450 1.0055 TS103 63
64 TS291 58.3920 48.2520 0.6246 0.7359 58.3920 48.2520 0.6246 0.7359 TS291 64
65 TS457 58.0420 46.1540 0.6046 0.5842 59.4410 46.3870 0.6847 0.6011 TS457 65
66 TS273 57.8670 46.6200 0.5945 0.6179 60.6640 47.7270 0.7548 0.6980 TS273 66
67 TS215 57.3430 43.9390 0.5645 0.4241 57.3430 45.9210 0.5645 0.5674 TS215 67
68 TS276 56.6430 48.3680 0.5244 0.7443 60.6640 50.8160 0.7548 0.9213 TS276 68
69 TS477 56.6430 48.3680 0.5244 0.7443 59.4410 50.8160 0.6847 0.9213 TS477 69
70 TS286 56.6430 48.3680 0.5244 0.7443 60.6640 50.8160 0.7548 0.9213 TS286 70
71 TS449 56.6430 44.9880 0.5244 0.4999 56.6430 44.9880 0.5244 0.4999 TS449 71
72 TS453 56.6430 44.9880 0.5244 0.4999 56.6430 44.9880 0.5244 0.4999 TS453 72
73 TS346 56.6430 44.9880 0.5244 0.4999 56.6430 44.9880 0.5244 0.4999 TS346 73
74 TS102 56.2940 43.5310 0.5044 0.3946 56.2940 43.9980 0.5044 0.4284 TS102 74
75 TS458 56.2940 43.5310 0.5044 0.3946 60.8390 48.0770 0.7648 0.7233 TS458 75
76 TS300 56.1190 45.9790 0.4944 0.5716 59.4410 46.8530 0.6847 0.6348 TS300 76
77 TS319 56.1190 44.4640 0.4944 0.4620 60.6640 47.7270 0.7548 0.6980 TS319 77
78 TS228 55.7690 44.4640 0.4743 0.4620 56.8180 45.5130 0.5344 0.5379 TS228 78
79 TS481 55.2450 40.3850 0.4443 0.1671 55.9440 45.1050 0.4843 0.5084 TS481 79
80 TS149 55.2450 40.3850 0.4443 0.1671 55.2450 40.3850 0.4443 0.1671 TS149 80
81 TS423 54.8950 42.4240 0.4242 0.3146 56.1190 46.8530 0.4944 0.6348 TS423 81
82 TS080 54.3710 46.4450 0.3942 0.6053 56.4690 46.4450 0.5144 0.6053 TS080 82
83 TS119 54.3710 46.4450 0.3942 0.6053 57.8670 46.7950 0.5945 0.6306 TS119 83
84 TS173 54.3710 45.7460 0.3942 0.5547 60.6640 50.0000 0.7548 0.8623 TS173 84
85 TS311 54.3710 38.2870 0.3942 0.0154 54.3710 41.7250 0.3942 0.2640 TS311 85
86 TS353 54.1960 42.8320 0.3842 0.3441 61.0140 49.4760 0.7749 0.8244 TS353 86
87 AL285 54.1960 41.0260 0.3842 0.2135 54.1960 41.0260 0.3842 0.2135 AL285 87
88 TS165 54.0210 43.5900 0.3741 0.3989 54.8950 46.6200 0.4242 0.6179 TS165 88
89 TS055 53.6710 42.5990 0.3541 0.3272 60.3150 49.0090 0.7348 0.7907 TS055 89
90 TS002 53.4970 45.9210 0.3441 0.5674 54.7200 48.0770 0.4142 0.7233 TS002 90
91 TS275 53.4970 38.4620 0.3441 0.0281 60.6640 48.5430 0.7548 0.7570 TS275 91
92 TS328 52.7970 43.9390 0.3040 0.4241 52.7970 43.9390 0.3040 0.4241 TS328 92
93 TS307 52.6220 42.1330 0.2940 0.2935 59.0910 46.3290 0.6647 0.5969 TS307 93
94 TS207 52.4480 43.1240 0.2840 0.3652 52.4480 43.1240 0.2840 0.3652 TS207 94
95 TS018 51.9230 43.5310 0.2539 0.3946 58.7410 47.4940 0.6446 0.6811 TS018 95
96 TS296 50.5240 42.1330 0.1737 0.2935 57.8670 46.7370 0.5945 0.6264 TS296 96
97 TS047 50.5240 41.7250 0.1737 0.2640 50.5240 41.7250 0.1737 0.2640 TS047 97
98 TS083 50.3500 42.7740 0.1638 0.3399 50.3500 42.7740 0.1638 0.3399 TS083 98
99 TS129 50.0000 36.0140 0.1437 -0.1489 52.4480 36.7130 0.2840 -0.0984 TS129 99
100 TS420 48.6010 35.2560 0.0635 -0.2037 48.6010 35.2560 0.0635 -0.2037 TS420 100
101 TS471 48.6010 35.2560 0.0635 -0.2037 48.6010 35.2560 0.0635 -0.2037 TS471 101
102 TS117 47.7270 39.3360 0.0135 0.0913 47.7270 39.3360 0.0135 0.0913 TS117 102
103 TS001 47.7270 36.1310 0.0135 -0.1404 60.6640 48.5430 0.7548 0.7570 TS001 103
104 TS171 47.7270 35.4310 0.0135 -0.1910 47.7270 35.4310 0.0135 -0.1910 TS171 104
105 AL396 47.2030 39.1610 -0.0166 0.0786 47.2030 39.1610 -0.0166 0.0786 AL396 105
106 TS476 47.2030 36.0140 -0.0166 -0.1489 47.2030 36.0140 -0.0166 -0.1489 TS476 106
107 TS056 46.5520 35.6320 -0.0539 -0.1765 54.1960 42.7160 0.3842 0.3357 TS056 107
108 TS147 44.5800 39.6850 -0.1669 0.1165 44.5800 39.6850 -0.1669 0.1165 TS147 108
109 TS214 43.1820 38.6950 -0.2470 0.0449 44.0560 38.6950 -0.1969 0.0449 TS214 109
110 TS186 43.0070 38.8110 -0.2570 0.0533 44.2310 38.8110 -0.1869 0.0533 TS186 110
111 TS435 41.0840 29.0790 -0.3672 -0.6503 41.7830 29.6620 -0.3272 -0.6081 TS435 111
112 TS244 36.3790 30.1720 -0.6368 -0.5713 59.4410 48.1350 0.6847 0.7275 TS244 112
113 TS045 34.4830 29.8280 -0.7455 -0.5961 34.4830 29.8280 -0.7455 -0.5961 TS045 113
114 TS345 32.1680 26.8070 -0.8782 -0.8146 50.0000 39.6270 0.1437 0.1123 TS345 114
115 TS026 31.6430 26.2820 -0.9082 -0.8525 50.5240 39.6270 0.1737 0.1123 TS026 115
116 TS316 30.4200 24.6500 -0.9783 -0.9705 32.8670 28.0890 -0.8381 -0.7219 TS316 116
117 TS042 30.0700 26.6900 -0.9984 -0.8230 33.0420 28.0890 -0.8281 -0.7219 TS042 117
118 TS355 24.4830 21.9540 -1.3185 -1.1654 24.4830 21.9540 -1.3185 -1.1654 TS355 118
119 TS153 24.3010 22.2030 -1.3290 -1.1474 24.3010 22.2030 -1.3290 -1.1474 TS153 119
120 TS200 21.8530 17.8320 -1.4693 -1.4635 21.8530 17.8320 -1.4693 -1.4635 TS200 120
121 TS250 21.1540 17.6570 -1.5093 -1.4761 27.6220 22.6110 -1.1387 -1.1179 TS250 121
122 TS220 20.9790 18.5900 -1.5193 -1.4087 21.1540 18.5900 -1.5093 -1.4087 TS220 122
123 TS447 20.9790 18.5900 -1.5193 -1.4087 21.1540 18.5900 -1.5093 -1.4087 TS447 123
124 TS403 20.8040 18.7060 -1.5294 -1.4003 20.8040 19.5220 -1.5294 -1.3413 TS403 124
125 TS182 20.4550 18.1240 -1.5494 -1.4424 20.4550 18.1240 -1.5494 -1.4424 TS182 125
126 TS084 18.8810 16.2000 -1.6396 -1.5815 18.8810 16.2000 -1.6396 -1.5815 TS084 126
127 TS257 18.5310 15.9090 -1.6596 -1.6025 22.0280 18.2980 -1.4592 -1.4298 TS257 127
128 TS264 18.5310 15.6180 -1.6596 -1.6235 20.4550 18.2980 -1.5494 -1.4298 TS264 128
129 TS461 18.3570 16.1420 -1.6696 -1.5857 18.7060 17.3080 -1.6496 -1.5014 TS461 129
130 TS314 18.0070 15.6760 -1.6897 -1.6193 50.1750 39.1030 0.1537 0.0744 TS314 130
131 TS373 17.4830 16.6080 -1.7197 -1.5520 20.1050 18.1820 -1.5694 -1.4382 TS373 131
132 TS020 17.4140 14.5400 -1.7236 -1.7015 19.4830 16.1490 -1.6051 -1.5852 TS020 132
133 TS350 16.7830 14.6270 -1.7598 -1.6952 27.7970 24.5340 -1.1286 -0.9789 TS350 133
134 TS029 16.7240 14.8280 -1.7632 -1.6807 26.5730 20.1630 -1.1988 -1.2949 TS029 134
135 TS229 16.6080 13.8110 -1.7698 -1.7542 17.1330 14.4520 -1.7397 -1.7078 TS229 135
136 RANDOM 16.42 13.60 -1.7806 -1.7694 16.42 13.60 -1.7806 -1.7694 RANDOM 136
137 TS304 16.2070 13.4480 -1.7928 -1.7804 36.8880 28.5550 -0.6077 -0.6882 TS304 137
138 TS206 15.3850 13.7530 -1.8399 -1.7584 15.3850 13.7530 -1.8399 -1.7584 TS206 138
139 TS278 15.1720 13.9660 -1.8521 -1.7430 15.1720 13.9660 -1.8521 -1.7430 TS278 139
140 TS336 14.8600 13.4620 -1.8700 -1.7794 14.8600 13.4620 -1.8700 -1.7794 TS336 140
141 TS248 14.8280 13.5060 -1.8718 -1.7762 14.8280 13.5060 -1.8718 -1.7762 TS248 141
142 TS333 13.2870 11.7130 -1.9601 -1.9059 15.5590 14.7440 -1.8299 -1.6867 TS333 142
143 TS289 12.5870 10.3730 -2.0002 -2.0028 12.5870 10.3730 -2.0002 -2.0028 TS289 143
144 TS436 6.2940 5.4780 -2.3609 -2.3567 6.2940 5.4780 -2.3609 -2.3567 TS436 144
145 TS009             -1.7806 -1.7694             -1.7806 -1.7694 TS009 145
146 TS014             -1.7806 -1.7694             -1.7806 -1.7694 TS014 146
147 TS039             -1.7806 -1.7694             -1.7806 -1.7694 TS039 147
148 TS044             -1.7806 -1.7694             -1.7806 -1.7694 TS044 148
149 TS074             -1.7806 -1.7694             -1.7806 -1.7694 TS074 149
150 TS075             -1.7806 -1.7694             -1.7806 -1.7694 TS075 150
151 TS086             -1.7806 -1.7694             -1.7806 -1.7694 TS086 151
152 TS105             -1.7806 -1.7694             -1.7806 -1.7694 TS105 152
153 TS140             -1.7806 -1.7694             -1.7806 -1.7694 TS140 153
154 TS150             -1.7806 -1.7694             -1.7806 -1.7694 TS150 154
155 TS152             -1.7806 -1.7694             -1.7806 -1.7694 TS152 155
156 TS154             -1.7806 -1.7694             -1.7806 -1.7694 TS154 156
157 TS160             -1.7806 -1.7694             -1.7806 -1.7694 TS160 157
158 TS178             -1.7806 -1.7694             -1.7806 -1.7694 TS178 158
159 TS180             -1.7806 -1.7694             -1.7806 -1.7694 TS180 159
160 TS184             -1.7806 -1.7694             -1.7806 -1.7694 TS184 160
161 TS189             -1.7806 -1.7694             -1.7806 -1.7694 TS189 161
162 TS254             -1.7806 -1.7694             -1.7806 -1.7694 TS254 162
163 TS261             -1.7806 -1.7694             -1.7806 -1.7694 TS261 163
164 TS263             -1.7806 -1.7694             -1.7806 -1.7694 TS263 164
165 TS269             -1.7806 -1.7694             -1.7806 -1.7694 TS269 165
166 TS279             -1.7806 -1.7694             -1.7806 -1.7694 TS279 166
167 TS282             -1.7806 -1.7694             -1.7806 -1.7694 TS282 167
168 TS299             -1.7806 -1.7694             -1.7806 -1.7694 TS299 168
169 TS322             -1.7806 -1.7694             -1.7806 -1.7694 TS322 169
170 TS330             -1.7806 -1.7694             -1.7806 -1.7694 TS330 170
171 TS331             -1.7806 -1.7694             -1.7806 -1.7694 TS331 171
172 TS347             -1.7806 -1.7694             -1.7806 -1.7694 TS347 172
173 TS358             -1.7806 -1.7694             -1.7806 -1.7694 TS358 173
174 TS362             -1.7806 -1.7694             -1.7806 -1.7694 TS362 174
175 TS391             -1.7806 -1.7694             -1.7806 -1.7694 TS391 175
176 TS433             -1.7806 -1.7694             -1.7806 -1.7694 TS433 176
177 TS439             -1.7806 -1.7694             -1.7806 -1.7694 TS439 177
178 TS444             -1.7806 -1.7694             -1.7806 -1.7694 TS444 178