T0526

Targets
515 516 517 518
519 520 521 522
523 524 525 526
527 528 529 530
531 532 533 534
535 536 537 538
539 540 541 542
543 544 545 546
547 548 549 550
551 552 553 554
555 556 557 558
559 560 561 562
563 564 565 566
567 568 569 570
571 572 573 574
575 576 577 578
579 580 581 582
583 584 585 586
587 588 589 590
591 592 593 594
595 596 597 598
599 600 601 602
603 604 605 606
607 608 609 610
611 612 613 614
615 616 617 618
619 620 621 622
623 624 625 626
627 628 629 630
631 632 633 634
635 636 637 638
639 640 641 642
643      

T0526

NP_417039.1 from Escherichia coli k12

Target type: Human/Server

Target sequence:

>T0526 NP_417039.1, Escherichia coli k12, 290 residues
MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL

HHsearch_pdb70_15May10,  HHsearch_scop70_1.75,  HorAServer

Structure:
Method: X-ray, res= Å, R/Rfree=
Determined by: JCSG
PDB ID: 3nre

Jmol of T0526 structure : 3nre

PyMOL of T0526

Domains:  

Single domain protein.   

DomainIDChainRange in raw pdbRange in targetpdb
T0526A0-2901-290
T0526B0-2901-290
T0526C0-2901-290
T0526D0-2901-290

Structure classification:

The description below was written months before target structure release, thus it only presents shuoyong's personal thoughts simply based on sequence. Please be aware that it may contain laughable errors. It is certainly not our final assessment on this target. We will revise this section (and the sequence classification too) in a short time

This maybe a homologue of T0524. Supersandwich, Galactose mutarotase-like, 18 strands in two sheets.

CASP category:

We evaluate this target on whole chain based on domainplot

Whole chain: TBM  alignment.

Closest templates:

Template manually selected by shuoyong:

1z45_A | PyMOL of 1z45 A 358-699

  

Template selected by HHpred server group:

Target sequence - PDB file inconsistencies:

Sequence classification:

Aldose 1-epimerase (PF01263).

All predictions:

TS (GDT_TS score), TR (GDT_TS with penalty [reference]

# GROUP ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ TS ↓ TR ↓ ↓ GROUP #
T0526 T0526 T0526 T0526
First score First Z-score Best score Best Z-score
1 TS386 76.3790 68.2180 1.3587 1.4856 76.8970 68.2180 1.4223 1.4856 TS386 1
2 TS484 76.3790 68.2180 1.3587 1.4856 76.3790 68.2180 1.3587 1.4856 TS484 2
3 TS470 76.1210 67.2700 1.3270 1.3674 76.9830 68.4770 1.4328 1.5179 TS470 3
4 TS236 76.1210 67.2700 1.3270 1.3674 76.9830 68.4770 1.4328 1.5179 TS236 4
5 TS395 75.9480 72.3280 1.3058 1.9981 75.9480 72.3280 1.3058 1.9981 TS395 5
6 TS077 75.9480 67.1550 1.3058 1.3531 75.9480 67.1550 1.3058 1.3531 TS077 6
7 TS419 75.9480 67.1550 1.3058 1.3531 75.9480 67.1550 1.3058 1.3531 TS419 7
8 TS435 75.9480 67.1550 1.3058 1.3531 75.9480 67.1550 1.3058 1.3531 TS435 8
9 TS286 75.9480 67.1550 1.3058 1.3531 75.9480 67.1550 1.3058 1.3531 TS286 9
10 TS418 75.8620 67.0110 1.2952 1.3351 75.8620 67.0110 1.2952 1.3351 TS418 10
11 TS096 75.5170 66.7240 1.2528 1.2993 75.5170 66.7240 1.2528 1.2993 TS096 11
12 TS104 75.3450 67.3560 1.2317 1.3781 75.3450 67.3560 1.2317 1.3781 TS104 12
13 TS490 75.3450 67.1840 1.2317 1.3567 75.5170 67.1840 1.2528 1.3567 TS490 13
14 TS114 75.0000 66.1490 1.1894 1.2276 75.2590 66.4660 1.2212 1.2672 TS114 14
15 TS088 75.0000 62.9890 1.1894 0.8336 75.0000 62.9890 1.1894 0.8336 TS088 15
16 TS094 74.8280 65.9770 1.1683 1.2062 76.9830 68.4770 1.4328 1.5179 TS094 16
17 TS407 74.8280 65.9770 1.1683 1.2062 76.8100 68.8220 1.4116 1.5609 TS407 17
18 TS113 74.3100 64.5400 1.1047 1.0270 76.2070 68.8510 1.3376 1.5646 TS113 18
19 TS276 74.1380 67.1840 1.0835 1.3567 74.1380 67.1840 1.0835 1.3567 TS276 19
20 TS399 74.1380 67.1840 1.0835 1.3567 76.1210 67.2700 1.3270 1.3674 TS399 20
21 TS016 74.0520 65.1440 1.0730 1.1023 74.7410 66.0920 1.1576 1.2205 TS016 21
22 TS242 73.8790 65.3160 1.0517 1.1237 74.3100 65.3160 1.1047 1.1237 TS242 22
23 TS110 73.7070 64.2820 1.0306 0.9948 73.7070 64.2820 1.0306 0.9948 TS110 23
24 TS033 73.1900 62.8450 0.9672 0.8156 73.1900 62.8450 0.9672 0.8156 TS033 24
25 TS400 72.9310 64.8850 0.9354 1.0700 72.9310 66.8100 0.9354 1.3100 TS400 25
26 TS147 72.6720 63.7070 0.9036 0.9231 72.6720 63.7070 0.9036 0.9231 TS147 26
27 TS380 72.5860 62.0690 0.8930 0.7188 72.5860 62.0690 0.8930 0.7188 TS380 27
28 TS297 72.5000 62.5000 0.8824 0.7726 74.5690 67.5000 1.1365 1.3961 TS297 28
29 TS402 72.5000 62.3850 0.8824 0.7583 73.5340 63.1030 1.0094 0.8478 TS402 29
30 TS428 72.1550 61.5800 0.8401 0.6579 72.1550 61.5800 0.8401 0.6579 TS428 30
31 TS037 72.0690 62.6440 0.8295 0.7906 75.0000 66.3510 1.1894 1.2528 TS037 31
32 TS061 72.0690 61.0340 0.8295 0.5898 72.1550 61.2930 0.8401 0.6221 TS061 32
33 TS449 71.8100 61.7530 0.7977 0.6794 71.8100 61.7530 0.7977 0.6794 TS449 33
34 TS453 71.8100 61.7530 0.7977 0.6794 71.8100 61.7530 0.7977 0.6794 TS453 34
35 TS346 71.8100 61.7530 0.7977 0.6794 71.8100 61.7530 0.7977 0.6794 TS346 35
36 TS429 71.2930 61.1780 0.7343 0.6077 71.2930 61.1780 0.7343 0.6077 TS429 36
37 TS365 70.5170 60.9200 0.6390 0.5756 70.5170 60.9200 0.6390 0.5756 TS365 37
38 TS361 70.4310 62.1550 0.6284 0.7296 74.0520 64.5980 1.0730 1.0342 TS361 38
39 TS461 70.0000 58.2180 0.5755 0.2386 71.2070 62.8450 0.7237 0.8156 TS461 39
40 TS056 69.9140 62.0400 0.5650 0.7152 69.9140 62.0400 0.5650 0.7152 TS056 40
41 TS119 69.5690 62.0400 0.5226 0.7152 70.3450 62.0400 0.6179 0.7152 TS119 41
42 TS080 69.4830 61.6670 0.5120 0.6687 74.8280 65.9770 1.1683 1.2062 TS080 42
43 TS002 69.4830 61.6670 0.5120 0.6687 74.8280 65.9770 1.1683 1.2062 TS002 43
44 TS103 69.3970 59.0520 0.5015 0.3426 69.3970 59.0520 0.5015 0.3426 TS103 44
45 TS215 69.2240 61.6670 0.4802 0.6687 70.6030 61.6670 0.6495 0.6687 TS215 45
46 TS214 68.8790 60.3740 0.4379 0.5075 70.2590 62.8450 0.6073 0.8156 TS214 46
47 TS063 68.6210 57.2990 0.4062 0.1240 70.0000 60.1150 0.5755 0.4752 TS063 47
48 TS304 68.5340 60.2590 0.3955 0.4931 68.5340 60.2590 0.3955 0.4931 TS304 48
49 TS423 68.4480 59.8280 0.3850 0.4394 69.7410 59.8280 0.5437 0.4394 TS423 49
50 TS186 68.2760 59.5980 0.3639 0.4107 70.7760 63.3050 0.6708 0.8730 TS186 50
51 TS391 68.1900 58.3050 0.3533 0.2495 68.1900 58.3050 0.3533 0.2495 TS391 51
52 TS275 68.0170 54.6840 0.3321 -0.2021 68.0170 57.5860 0.3321 0.1598 TS275 52
53 TS382 67.9310 57.4140 0.3215 0.1384 67.9310 57.4140 0.3215 0.1384 TS382 53
54 TS018 67.6720 60.3160 0.2897 0.5003 67.6720 60.3160 0.2897 0.5003 TS018 54
55 TS207 67.6720 59.8560 0.2897 0.4429 68.7930 61.6670 0.4273 0.6687 TS207 55
56 TS299 67.6720 54.8560 0.2897 -0.1806 67.8450 55.4310 0.3109 -0.1089 TS299 56
57 TS324 67.5860 61.2070 0.2791 0.6114 76.1210 67.2700 1.3270 1.3674 TS324 57
58 TS199 67.5000 61.2930 0.2686 0.6221 67.5000 61.2930 0.2686 0.6221 TS199 58
59 TS208 67.5000 58.5060 0.2686 0.2745 67.5000 58.5060 0.2686 0.2745 TS208 59
60 TS408 67.4140 61.0920 0.2580 0.5970 73.7930 61.7530 1.0412 0.6794 TS408 60
61 TS174 67.4140 56.8390 0.2580 0.0667 67.4140 56.8390 0.2580 0.0667 TS174 61
62 TS458 67.0690 58.7930 0.2157 0.3103 67.0690 58.7930 0.2157 0.3103 TS458 62
63 TS301 66.8970 57.7590 0.1946 0.1814 66.8970 57.7590 0.1946 0.1814 TS301 63
64 TS409 66.8100 60.3160 0.1839 0.5003 66.8100 60.3160 0.1839 0.5003 TS409 64
65 TS345 66.2070 57.4140 0.1098 0.1384 69.3970 57.8740 0.5015 0.1957 TS345 65
66 TS165 65.7760 56.0630 0.0569 -0.0301 67.9310 56.3220 0.3215 0.0022 TS165 66
67 TS253 65.6900 54.8280 0.0464 -0.1841 65.6900 54.8280 0.0464 -0.1841 TS253 67
68 TS314 65.6030 56.6380 0.0357 0.0416 65.6030 56.6380 0.0357 0.0416 TS314 68
69 TS102 65.2590 55.3160 -0.0065 -0.1232 65.6030 56.9830 0.0357 0.0846 TS102 69
70 TS457 65.2590 54.7410 -0.0065 -0.1949 65.7760 55.0290 0.0569 -0.1590 TS457 70
71 TS360 65.1720 54.7700 -0.0172 -0.1913 65.1720 54.7700 -0.0172 -0.1913 TS360 71
72 TS153 65.0860 58.1900 -0.0278 0.2351 65.0860 58.1900 -0.0278 0.2351 TS153 72
73 TS295 65.0000 57.5290 -0.0383 0.1527 72.3280 62.6150 0.8613 0.7869 TS295 73
74 TS452 64.9140 56.2360 -0.0489 -0.0085 65.3450 57.6440 0.0040 0.1671 TS452 74
75 TS307 64.6550 57.8160 -0.0807 0.1885 65.8620 57.8160 0.0675 0.1885 TS307 75
76 TS424 64.4830 55.4020 -0.1018 -0.1125 64.4830 55.4020 -0.1018 -0.1125 TS424 76
77 TS047 64.3970 54.1670 -0.1124 -0.2665 64.3970 54.1670 -0.1124 -0.2665 TS047 77
78 TS218 64.2240 53.9370 -0.1336 -0.2952 64.5690 54.5110 -0.0913 -0.2236 TS218 78
79 TS439 63.9660 57.8740 -0.1653 0.1957 63.9660 57.8740 -0.1653 0.1957 TS439 79
80 TS213 63.7930 56.3790 -0.1865 0.0093 63.7930 56.3790 -0.1865 0.0093 TS213 80
81 TS245 63.7070 54.1670 -0.1971 -0.2665 63.7070 54.1670 -0.1971 -0.2665 TS245 81
82 TS001 63.4480 54.6550 -0.2289 -0.2057 66.6380 56.9830 0.1628 0.0846 TS001 82
83 TS028 63.4480 52.4140 -0.2289 -0.4851 65.0860 55.6900 -0.0278 -0.0766 TS028 83
84 TS321 63.3620 55.9480 -0.2394 -0.0444 68.2760 61.2070 0.3639 0.6114 TS321 84
85 TS291 62.6720 57.5000 -0.3242 0.1491 63.6210 57.5000 -0.2076 0.1491 TS291 85
86 TS319 62.6720 52.8450 -0.3242 -0.4314 66.6380 56.9830 0.1628 0.0846 TS319 86
87 TS273 62.6720 52.8450 -0.3242 -0.4314 66.6380 56.9830 0.1628 0.0846 TS273 87
88 TS366 62.5000 54.4540 -0.3453 -0.2307 67.5000 57.3280 0.2686 0.1277 TS366 88
89 TS172 61.8970 54.1380 -0.4193 -0.2701 61.8970 54.1380 -0.4193 -0.2701 TS172 89
90 TS035 61.1210 49.1090 -0.5146 -0.8973 75.4310 65.5460 1.2423 1.1524 TS035 90
91 TS166 60.6900 50.9770 -0.5675 -0.6643 71.8100 63.0750 0.7977 0.8443 TS166 91
92 TS302 60.5170 49.5400 -0.5887 -0.8435 65.0000 58.3330 -0.0383 0.2530 TS302 92
93 TS142 60.5170 49.5400 -0.5887 -0.8435 65.0000 58.3330 -0.0383 0.2530 TS142 93
94 AL396 60.4310 49.7700 -0.5993 -0.8148 61.1210 52.5570 -0.5146 -0.4673 AL396 94
95 TS192 60.3450 49.2530 -0.6099 -0.8793 60.3450 49.2530 -0.6099 -0.8793 TS192 95
96 TS026 60.3450 49.1090 -0.6099 -0.8973 67.0690 56.5520 0.2157 0.0309 TS026 96
97 TS029 60.1720 51.8970 -0.6311 -0.5496 60.1720 51.8970 -0.6311 -0.5496 TS029 97
98 TS347 60.1720 50.6900 -0.6311 -0.7001 68.9660 59.1380 0.4486 0.3534 TS347 98
99 TS481 59.3970 51.0060 -0.7262 -0.6607 59.7410 52.3850 -0.6840 -0.4887 TS481 99
100 TS300 59.0520 51.8100 -0.7686 -0.5604 72.1550 62.0400 0.8401 0.7152 TS300 100
101 TS127 59.0520 51.0060 -0.7686 -0.6607 63.7930 56.3790 -0.1865 0.0093 TS127 101
102 TS353 58.7930 52.8160 -0.8004 -0.4350 58.7930 52.8160 -0.8004 -0.4350 TS353 102
103 TS476 57.6720 49.5110 -0.9380 -0.8471 57.6720 50.6320 -0.9380 -0.7073 TS476 103
104 TS171 57.5860 49.7130 -0.9486 -0.8219 59.6550 51.8390 -0.6946 -0.5568 TS171 104
105 TS296 57.2410 47.7590 -0.9909 -1.0656 66.6380 56.9830 0.1628 0.0846 TS296 105
106 TS420 57.0690 46.4940 -1.0121 -1.2233 57.4140 50.2300 -0.9697 -0.7575 TS420 106
107 TS471 57.0690 46.4940 -1.0121 -1.2233 57.4140 50.2300 -0.9697 -0.7575 TS471 107
108 TS173 56.7240 45.1150 -1.0544 -1.3953 64.9140 57.9020 -0.0489 0.1992 TS173 108
109 TS117 56.0340 47.9310 -1.1391 -1.0441 56.1210 48.1610 -1.1284 -1.0155 TS117 109
110 TS403 53.0170 44.9140 -1.5095 -1.4204 54.3100 44.9710 -1.3508 -1.4133 TS403 110
111 TS045 51.7240 45.3450 -1.6683 -1.3666 51.7240 45.3450 -1.6683 -1.3666 TS045 111
112 TS020 51.1210 44.2820 -1.7423 -1.4992 52.5000 47.6150 -1.5730 -1.0836 TS020 112
113 TS250 49.6550 38.5060 -1.9223 -2.2194 49.6550 43.6490 -1.9223 -1.5781 TS250 113
114 TS244 47.0690 39.8850 -2.2398 -2.0475 63.5340 54.9710 -0.2183 -0.1663 TS244 114
115 AL285 46.9830 39.8560 -2.2503 -2.0511 60.6900 51.9830 -0.5675 -0.5389 AL285 115
116 TS311 45.2590 38.2470 -2.4620 -2.2517 55.8620 46.6670 -1.1602 -1.2018 TS311 116
117 TS278 42.5000 35.8330 -2.8007 -2.5528 42.5000 35.8330 -2.8007 -2.5528 TS278 117
118 TS289 32.9310 24.9430 -3.9755 -3.9107 32.9310 24.9430 -3.9755 -3.9107 TS289 118
119 TS206 31.0340 25.4020 -4.2084 -3.8535 31.0340 25.4020 -4.2084 -3.8535 TS206 119
120 TS333 22.1550 18.8220 -5.2985 -4.6740 28.1030 24.4830 -4.5683 -3.9681 TS333 120
121 TS450 19.3100 16.2640 -5.6478 -4.9930 19.3100 16.2640 -5.6478 -4.9930 TS450 121
122 TS042 13.6210 11.3790 -6.3463 -5.6021 13.6210 12.0400 -6.3463 -5.5197 TS042 122
123 TS330 11.0340 8.4480 -6.6639 -5.9676 11.0340 8.4480 -6.6639 -5.9676 TS330 123
124 TS355 10.6030 9.1950 -6.7168 -5.8745 11.0340 9.5980 -6.6639 -5.8242 TS355 124
125 TS257 10.5170 9.3390 -6.7273 -5.8565 14.3970 12.0400 -6.2510 -5.5197 TS257 125
126 TS316 10.1720 8.7070 -6.7697 -5.9353 13.8790 12.1550 -6.3146 -5.5054 TS316 126
127 TS014 9.4830 6.8970 -6.8543 -6.1610 10.6030 9.6550 -6.7168 -5.8171 TS014 127
128 TS084 8.7070 7.8450 -6.9496 -6.0428 10.4310 9.3680 -6.7379 -5.8529 TS084 128
129 TS055 8.4480 7.1260 -6.9814 -6.1325 12.3280 11.4660 -6.5050 -5.5913 TS055 129
130 RANDOM 8.32 6.82 -6.9971 -6.1706 8.32 6.82 -6.9971 -6.1706 RANDOM 130
131 TS229 7.7590 6.4370 -7.0659 -6.2184 8.0170 6.6950 -7.0343 -6.1862 TS229 131
132 TS264 7.6720 6.1780 -7.0766 -6.2507 7.8450 6.1780 -7.0554 -6.2507 TS264 132
133 TS279 7.2410 5.9480 -7.1295 -6.2794 7.2410 5.9480 -7.1295 -6.2794 TS279 133
134 TS129 6.1210 5.4310 -7.2670 -6.3439 6.1210 5.4310 -7.2670 -6.3439 TS129 134
135 TS009             -6.9971 -6.1706             -6.9971 -6.1706 TS009 135
136 TS039             -6.9971 -6.1706             -6.9971 -6.1706 TS039 136
137 TS044             -6.9971 -6.1706             -6.9971 -6.1706 TS044 137
138 TS060             -6.9971 -6.1706             -6.9971 -6.1706 TS060 138
139 TS074             -6.9971 -6.1706             -6.9971 -6.1706 TS074 139
140 TS075             -6.9971 -6.1706             -6.9971 -6.1706 TS075 140
141 TS083             -6.9971 -6.1706             -6.9971 -6.1706 TS083 141
142 TS086             -6.9971 -6.1706             -6.9971 -6.1706 TS086 142
143 TS105             -6.9971 -6.1706             -6.9971 -6.1706 TS105 143
144 TS140             -6.9971 -6.1706             -6.9971 -6.1706 TS140 144
145 TS149             -6.9971 -6.1706             -6.9971 -6.1706 TS149 145
146 TS150             -6.9971 -6.1706             -6.9971 -6.1706 TS150 146
147 TS152             -6.9971 -6.1706             -6.9971 -6.1706 TS152 147
148 TS154             -6.9971 -6.1706             -6.9971 -6.1706 TS154 148
149 TS160             -6.9971 -6.1706             -6.9971 -6.1706 TS160 149
150 TS170             -6.9971 -6.1706             -6.9971 -6.1706 TS170 150
151 TS178             -6.9971 -6.1706             -6.9971 -6.1706 TS178 151
152 TS180             -6.9971 -6.1706             -6.9971 -6.1706 TS180 152
153 TS182             -6.9971 -6.1706             -6.9971 -6.1706 TS182 153
154 TS184             -6.9971 -6.1706             -6.9971 -6.1706 TS184 154
155 TS189             -6.9971 -6.1706             -6.9971 -6.1706 TS189 155
156 TS200             -6.9971 -6.1706             -6.9971 -6.1706 TS200 156
157 TS220             -6.9971 -6.1706             -0.4722 -0.8435 TS220 157
158 TS228             -6.9971 -6.1706             -6.9971 -6.1706 TS228 158
159 TS240             -6.9971 -6.1706             -6.9971 -6.1706 TS240 159
160 TS248             -6.9971 -6.1706             -6.9971 -6.1706 TS248 160
161 TS254             -6.9971 -6.1706             -6.9971 -6.1706 TS254 161
162 TS261             -6.9971 -6.1706             -6.9971 -6.1706 TS261 162
163 TS263             -6.9971 -6.1706             -6.9971 -6.1706 TS263 163
164 TS269             -6.9971 -6.1706             -6.9971 -6.1706 TS269 164
165 TS282             -6.9971 -6.1706             -6.9971 -6.1706 TS282 165
166 TS322             -6.9971 -6.1706             -6.9971 -6.1706 TS322 166
167 TS328             -6.9971 -6.1706             -6.9971 -6.1706 TS328 167
168 TS331             -6.9971 -6.1706             -6.9971 -6.1706 TS331 168
169 TS336             -6.9971 -6.1706             -6.9971 -6.1706 TS336 169
170 TS350             -6.9971 -6.1706             -6.9971 -6.1706 TS350 170
171 TS358             -6.9971 -6.1706             0.4486 0.3534 TS358 171
172 TS362             -6.9971 -6.1706             -6.9971 -6.1706 TS362 172
173 TS373             -6.9971 -6.1706             -6.9971 -6.1706 TS373 173
174 TS433             -6.9971 -6.1706             -6.9971 -6.1706 TS433 174
175 TS436             -6.9971 -6.1706             -6.9971 -6.1706 TS436 175
176 TS444             -6.9971 -6.1706             -6.9971 -6.1706 TS444 176
177 TS447             -6.9971 -6.1706             -0.4722 -0.8435 TS447 177
178 TS477             -6.9971 -6.1706             -6.9971 -6.1706 TS477 178