| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1107 |
All predicted COG clusters |
|---|---|---|---|
| 1g000236m | 1810 | hhsearch probability: 96.12 Identity: 19% subject length: 715 Length of aligned reigon: 147 Coverage over query: 453-612 Coverage over subject: 115-278 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0557, VacB Exoribonuclease R [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] |
| 1g000242m | 1801 | hhsearch probability: 96.16 Identity: 28% subject length: 715 Length of aligned reigon: 72 Coverage over query: 1328-1406 Coverage over subject: 116-187 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0557, VacB Exoribonuclease R [Transcription] |
| 1g000173m | 1935 | hhsearch probability: 96.01 Identity: 19% subject length: 715 Length of aligned reigon: 147 Coverage over query: 578-737 Coverage over subject: 115-278 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0557, VacB Exoribonuclease R [Transcription] |
| 1g000176m | 1924 | hhsearch probability: 96.40 Identity: 19% subject length: 715 Length of aligned reigon: 155 Coverage over query: 754-937 Coverage over subject: 115-281 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0457, NrfG FOG: TPR repeat [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4105, ComL DNA uptake lipoprotein [General function prediction only] COG1729, Uncharacterized protein conserved in bacteria [Function unknown] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG4785, NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] COG0557, VacB Exoribonuclease R [Transcription] |
| 1g001046m | 1176 | hhsearch probability: 95.77 Identity: 30% subject length: 715 Length of aligned reigon: 70 Coverage over query: 219-296 Coverage over subject: 118-189 |
COG1204, Superfamily II helicase [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG4889, Predicted helicase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG3587, Restriction endonuclease [Defense mechanisms] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] |
| 1g000227m | 1826 | hhsearch probability: 96.30 Identity: 28% subject length: 715 Length of aligned reigon: 72 Coverage over query: 1462-1540 Coverage over subject: 116-187 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG5191, Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only] COG5010, TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] COG0557, VacB Exoribonuclease R [Transcription] COG5107, RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] |
| 1g002054m | 974 | hhsearch probability: 95.90 Identity: 23% subject length: 715 Length of aligned reigon: 61 Coverage over query: 904-964 Coverage over subject: 116-177 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] |
| 1g022938m | 289 | hhsearch probability: 95.18 Identity: 19% subject length: 715 Length of aligned reigon: 68 Coverage over query: 95-175 Coverage over subject: 118-186 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g011538m | 483 | hhsearch probability: 94.95 Identity: 14% subject length: 715 Length of aligned reigon: 150 Coverage over query: 165-363 Coverage over subject: 115-281 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g010232m | 514 | hhsearch probability: 94.59 Identity: 14% subject length: 715 Length of aligned reigon: 149 Coverage over query: 166-363 Coverage over subject: 116-281 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g021034m | 318 | hhsearch probability: 96.28 Identity: 24% subject length: 715 Length of aligned reigon: 54 Coverage over query: 259-318 Coverage over subject: 117-171 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g015066m | 414 | hhsearch probability: 96.78 Identity: 14% subject length: 715 Length of aligned reigon: 149 Coverage over query: 95-251 Coverage over subject: 118-282 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g005707m | 681 | hhsearch probability: 96.43 Identity: 17% subject length: 715 Length of aligned reigon: 76 Coverage over query: 255-338 Coverage over subject: 115-190 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g000449m | 1497 | hhsearch probability: 96.43 Identity: 18% subject length: 715 Length of aligned reigon: 155 Coverage over query: 755-938 Coverage over subject: 116-282 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] |
| 1g030172m | 182 | hhsearch probability: 90.83 Identity: 13% subject length: 715 Length of aligned reigon: 38 Coverage over query: 140-179 Coverage over subject: 118-155 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g026737m | 234 | hhsearch probability: 95.70 Identity: 29% subject length: 715 Length of aligned reigon: 68 Coverage over query: 53-131 Coverage over subject: 117-189 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g001115m | 1152 | hhsearch probability: 96.44 Identity: 18% subject length: 715 Length of aligned reigon: 147 Coverage over query: 578-737 Coverage over subject: 115-278 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] |
| 1g024995m | 259 | hhsearch probability: 96.45 Identity: 29% subject length: 715 Length of aligned reigon: 68 Coverage over query: 53-131 Coverage over subject: 117-189 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] |
| 1g026794m | 233 | hhsearch probability: 96.71 Identity: 29% subject length: 715 Length of aligned reigon: 68 Coverage over query: 53-131 Coverage over subject: 117-189 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] |
| 1g008040m | 580 | hhsearch probability: 93.37 Identity: 24% subject length: 715 Length of aligned reigon: 79 Coverage over query: 109-193 Coverage over subject: 211-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g002487m | 916 | hhsearch probability: 97.39 Identity: 28% subject length: 715 Length of aligned reigon: 71 Coverage over query: 759-836 Coverage over subject: 118-189 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] |
| 1g039337m | 1344 | hhsearch probability: 95.92 Identity: 16% subject length: 715 Length of aligned reigon: 73 Coverage over query: 839-918 Coverage over subject: 115-187 |
COG2183, Tex Transcriptional accessory protein [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5164, SPT5 Transcription elongation factor [Transcription] COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair] |
| 1g006717m | 634 | hhsearch probability: 93.08 Identity: 8% subject length: 715 Length of aligned reigon: 83 Coverage over query: 109-200 Coverage over subject: 205-288 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g012612m | 460 | hhsearch probability: 95.52 Identity: 17% subject length: 715 Length of aligned reigon: 78 Coverage over query: 27-112 Coverage over subject: 211-288 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] |
| 1g012426m | 464 | hhsearch probability: 95.01 Identity: 15% subject length: 715 Length of aligned reigon: 79 Coverage over query: 26-112 Coverage over subject: 210-288 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g011197m | 491 | hhsearch probability: 94.85 Identity: 15% subject length: 715 Length of aligned reigon: 79 Coverage over query: 27-113 Coverage over subject: 211-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g011364m | 487 | hhsearch probability: 95.38 Identity: 15% subject length: 715 Length of aligned reigon: 78 Coverage over query: 27-112 Coverage over subject: 211-288 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] |
| 1g012529m | 461 | hhsearch probability: 95.05 Identity: 15% subject length: 715 Length of aligned reigon: 79 Coverage over query: 27-113 Coverage over subject: 211-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] |
| 1g010544m | 507 | hhsearch probability: 95.47 Identity: 17% subject length: 715 Length of aligned reigon: 90 Coverage over query: 25-130 Coverage over subject: 198-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g008808m | 553 | hhsearch probability: 95.97 Identity: 19% subject length: 715 Length of aligned reigon: 88 Coverage over query: 92-194 Coverage over subject: 202-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] |
| 1g014884m | 416 | hhsearch probability: 96.12 Identity: 41% subject length: 715 Length of aligned reigon: 46 Coverage over query: 229-277 Coverage over subject: 18-81 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g015636m | 403 | hhsearch probability: 96.59 Identity: 31% subject length: 715 Length of aligned reigon: 62 Coverage over query: 230-292 Coverage over subject: 3-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g013183m | 448 | hhsearch probability: 96.16 Identity: 41% subject length: 715 Length of aligned reigon: 46 Coverage over query: 229-277 Coverage over subject: 18-81 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g008405m | 567 | hhsearch probability: 96.03 Identity: 14% subject length: 715 Length of aligned reigon: 93 Coverage over query: 23-130 Coverage over subject: 196-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2502, AsnA Asparagine synthetase A [Amino acid transport and metabolism] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g013163m | 448 | hhsearch probability: 96.48 Identity: 36% subject length: 715 Length of aligned reigon: 47 Coverage over query: 227-280 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g017647m | 368 | hhsearch probability: 96.45 Identity: 33% subject length: 715 Length of aligned reigon: 45 Coverage over query: 239-293 Coverage over subject: 2-67 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g016878m | 381 | hhsearch probability: 96.53 Identity: 30% subject length: 715 Length of aligned reigon: 46 Coverage over query: 109-166 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g015690m | 402 | hhsearch probability: 97.06 Identity: 30% subject length: 715 Length of aligned reigon: 56 Coverage over query: 118-187 Coverage over subject: 8-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g010831m | 499 | hhsearch probability: 96.46 Identity: 33% subject length: 715 Length of aligned reigon: 45 Coverage over query: 239-293 Coverage over subject: 2-67 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g021275m | 315 | hhsearch probability: 97.35 Identity: 28% subject length: 715 Length of aligned reigon: 57 Coverage over query: 117-187 Coverage over subject: 7-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g015703m | 402 | hhsearch probability: 97.06 Identity: 30% subject length: 715 Length of aligned reigon: 56 Coverage over query: 118-187 Coverage over subject: 8-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g013277m | 446 | hhsearch probability: 96.51 Identity: 33% subject length: 715 Length of aligned reigon: 45 Coverage over query: 239-293 Coverage over subject: 2-67 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g013865m | 435 | hhsearch probability: 96.10 Identity: 19% subject length: 715 Length of aligned reigon: 88 Coverage over query: 92-194 Coverage over subject: 202-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] |
| 1g015695m | 402 | hhsearch probability: 97.06 Identity: 30% subject length: 715 Length of aligned reigon: 56 Coverage over query: 118-187 Coverage over subject: 8-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g011767m | 478 | hhsearch probability: 96.54 Identity: 37% subject length: 715 Length of aligned reigon: 57 Coverage over query: 229-288 Coverage over subject: 18-105 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g012301m | 466 | hhsearch probability: 96.48 Identity: 36% subject length: 715 Length of aligned reigon: 58 Coverage over query: 222-290 Coverage over subject: 18-106 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g011450m | 485 | hhsearch probability: 95.22 Identity: 32% subject length: 715 Length of aligned reigon: 44 Coverage over query: 180-233 Coverage over subject: 2-66 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g019908m | 334 | hhsearch probability: 97.40 Identity: 32% subject length: 715 Length of aligned reigon: 56 Coverage over query: 133-202 Coverage over subject: 8-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g014800m | 418 | hhsearch probability: 97.36 Identity: 34% subject length: 715 Length of aligned reigon: 59 Coverage over query: 145-215 Coverage over subject: 18-106 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g014903m | 416 | hhsearch probability: 96.77 Identity: 33% subject length: 715 Length of aligned reigon: 46 Coverage over query: 144-201 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g012891m | 454 | hhsearch probability: 96.56 Identity: 38% subject length: 715 Length of aligned reigon: 24 Coverage over query: 265-288 Coverage over subject: 54-78 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g019562m | 339 | hhsearch probability: 96.82 Identity: 38% subject length: 715 Length of aligned reigon: 47 Coverage over query: 191-248 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g010330m | 513 | hhsearch probability: 96.94 Identity: 38% subject length: 715 Length of aligned reigon: 47 Coverage over query: 191-248 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g015732m | 401 | hhsearch probability: 97.37 Identity: 29% subject length: 715 Length of aligned reigon: 69 Coverage over query: 118-199 Coverage over subject: 8-106 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g019721m | 336 | hhsearch probability: 96.70 Identity: 38% subject length: 715 Length of aligned reigon: 47 Coverage over query: 191-248 Coverage over subject: 18-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g014799m | 418 | hhsearch probability: 97.53 Identity: 32% subject length: 715 Length of aligned reigon: 68 Coverage over query: 133-214 Coverage over subject: 8-105 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g012541m | 461 | hhsearch probability: 96.84 Identity: 38% subject length: 715 Length of aligned reigon: 48 Coverage over query: 138-196 Coverage over subject: 17-82 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g025877m | 247 | hhsearch probability: 97.55 Identity: 32% subject length: 715 Length of aligned reigon: 57 Coverage over query: 132-202 Coverage over subject: 7-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g030170m | 182 | hhsearch probability: 95.75 Identity: 22% subject length: 715 Length of aligned reigon: 58 Coverage over query: 84-157 Coverage over subject: 121-179 |
COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g013856m | 435 | hhsearch probability: 96.34 Identity: 19% subject length: 715 Length of aligned reigon: 88 Coverage over query: 92-194 Coverage over subject: 202-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] |
| 1g017368m | 373 | hhsearch probability: 96.21 Identity: 15% subject length: 715 Length of aligned reigon: 99 Coverage over query: 17-130 Coverage over subject: 190-289 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0172, SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g044309m | 259 | hhsearch probability: 97.66 Identity: 21% subject length: 715 Length of aligned reigon: 101 Coverage over query: 83-192 Coverage over subject: 119-231 |
COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| 1g015023m | 414 | hhsearch probability: 96.11 Identity: 19% subject length: 715 Length of aligned reigon: 64 Coverage over query: 136-199 Coverage over subject: 3-80 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g015015m | 414 | hhsearch probability: 96.14 Identity: 19% subject length: 715 Length of aligned reigon: 64 Coverage over query: 136-199 Coverage over subject: 3-80 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g016758m | 383 | hhsearch probability: 97.05 Identity: 29% subject length: 715 Length of aligned reigon: 56 Coverage over query: 99-168 Coverage over subject: 8-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] |
| 1g005716m | 681 | hhsearch probability: 97.49 Identity: 21% subject length: 715 Length of aligned reigon: 82 Coverage over query: 267-355 Coverage over subject: 115-196 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| 1g016833m | 382 | hhsearch probability: 97.00 Identity: 29% subject length: 715 Length of aligned reigon: 28 Coverage over query: 241-271 Coverage over subject: 200-230 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] |
| 1g017925m | 363 | hhsearch probability: 96.38 Identity: 33% subject length: 715 Length of aligned reigon: 46 Coverage over query: 103-158 Coverage over subject: 2-68 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g017928m | 363 | hhsearch probability: 96.38 Identity: 33% subject length: 715 Length of aligned reigon: 46 Coverage over query: 103-158 Coverage over subject: 2-68 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g006345m | 649 | hhsearch probability: 92.29 Identity: 24% subject length: 715 Length of aligned reigon: 66 Coverage over query: 549-645 Coverage over subject: 49-116 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g019801m | 335 | hhsearch probability: 96.78 Identity: 36% subject length: 715 Length of aligned reigon: 28 Coverage over query: 81-120 Coverage over subject: 55-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g019828m | 335 | hhsearch probability: 96.28 Identity: 30% subject length: 715 Length of aligned reigon: 46 Coverage over query: 63-120 Coverage over subject: 18-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g004641m | 740 | hhsearch probability: 95.98 Identity: 17% subject length: 715 Length of aligned reigon: 69 Coverage over query: 554-636 Coverage over subject: 3-79 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g004646m | 740 | hhsearch probability: 95.98 Identity: 17% subject length: 715 Length of aligned reigon: 69 Coverage over query: 554-636 Coverage over subject: 3-79 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] |
| 1g018229m | 359 | hhsearch probability: 96.80 Identity: 15% subject length: 715 Length of aligned reigon: 98 Coverage over query: 17-129 Coverage over subject: 190-288 |
COG0173, AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] |
| 1g004651m | 739 | hhsearch probability: 95.95 Identity: 17% subject length: 715 Length of aligned reigon: 70 Coverage over query: 554-637 Coverage over subject: 3-80 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g007833m | 588 | hhsearch probability: 96.42 Identity: 19% subject length: 715 Length of aligned reigon: 69 Coverage over query: 402-484 Coverage over subject: 3-79 |
COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG5269, ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1076, DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g031581m | 157 | hhsearch probability: 97.25 Identity: 40% subject length: 715 Length of aligned reigon: 45 Coverage over query: 88-140 Coverage over subject: 19-88 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032147m | 146 | hhsearch probability: 97.42 Identity: 42% subject length: 715 Length of aligned reigon: 45 Coverage over query: 56-111 Coverage over subject: 17-86 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g030696m | 173 | hhsearch probability: 97.11 Identity: 38% subject length: 715 Length of aligned reigon: 45 Coverage over query: 111-165 Coverage over subject: 18-87 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g038026m | 98 | hhsearch probability: 93.76 Identity: 20% subject length: 715 Length of aligned reigon: 35 Coverage over query: 55-92 Coverage over subject: 55-91 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032638m | 136 | hhsearch probability: 93.30 Identity: 44% subject length: 715 Length of aligned reigon: 27 Coverage over query: 89-116 Coverage over subject: 2-35 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g044496m | 142 | hhsearch probability: 90.30 Identity: 21% subject length: 715 Length of aligned reigon: 71 Coverage over query: 35-114 Coverage over subject: 214-290 |
COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3111, Periplasmic protein with OB-fold [Function unknown] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g031276m | 162 | hhsearch probability: 96.55 Identity: 32% subject length: 715 Length of aligned reigon: 47 Coverage over query: 104-157 Coverage over subject: 3-73 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g031467m | 159 | hhsearch probability: 96.79 Identity: 35% subject length: 715 Length of aligned reigon: 23 Coverage over query: 89-111 Coverage over subject: 54-80 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g034351m | 97 | hhsearch probability: 96.19 Identity: 30% subject length: 715 Length of aligned reigon: 30 Coverage over query: 47-76 Coverage over subject: 54-87 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g031166m | 164 | hhsearch probability: 96.99 Identity: 29% subject length: 715 Length of aligned reigon: 58 Coverage over query: 78-146 Coverage over subject: 19-87 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g022585m | 295 | hhsearch probability: 96.44 Identity: 28% subject length: 715 Length of aligned reigon: 29 Coverage over query: 230-258 Coverage over subject: 17-69 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032530m | 139 | hhsearch probability: 96.96 Identity: 19% subject length: 715 Length of aligned reigon: 70 Coverage over query: 14-93 Coverage over subject: 215-288 |
COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1599, RFA1 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |
| 1g040777m | 380 | hhsearch probability: 97.78 Identity: 29% subject length: 715 Length of aligned reigon: 58 Coverage over query: 307-375 Coverage over subject: 5-87 |
COG2989, Uncharacterized protein conserved in bacteria [Function unknown] COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3023, ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g042059m | 185 | hhsearch probability: 96.54 Identity: 44% subject length: 715 Length of aligned reigon: 25 Coverage over query: 99-123 Coverage over subject: 54-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032894m | 131 | hhsearch probability: 97.40 Identity: 33% subject length: 715 Length of aligned reigon: 24 Coverage over query: 65-88 Coverage over subject: 54-81 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032888m | 131 | hhsearch probability: 97.40 Identity: 33% subject length: 715 Length of aligned reigon: 24 Coverage over query: 65-88 Coverage over subject: 54-81 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g037534m | 108 | hhsearch probability: 97.43 Identity: 36% subject length: 715 Length of aligned reigon: 45 Coverage over query: 47-101 Coverage over subject: 18-87 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032896m | 131 | hhsearch probability: 97.40 Identity: 33% subject length: 715 Length of aligned reigon: 24 Coverage over query: 65-88 Coverage over subject: 54-81 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g033533m | 117 | hhsearch probability: 97.04 Identity: 33% subject length: 715 Length of aligned reigon: 55 Coverage over query: 52-113 Coverage over subject: 17-96 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g014221m | 428 | hhsearch probability: 97.17 Identity: 36% subject length: 715 Length of aligned reigon: 64 Coverage over query: 220-287 Coverage over subject: 3-87 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032984m | 129 | hhsearch probability: 97.02 Identity: 34% subject length: 715 Length of aligned reigon: 53 Coverage over query: 52-111 Coverage over subject: 17-94 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g033546m | 117 | hhsearch probability: 97.04 Identity: 33% subject length: 715 Length of aligned reigon: 55 Coverage over query: 52-113 Coverage over subject: 17-96 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g032882m | 131 | hhsearch probability: 96.83 Identity: 37% subject length: 715 Length of aligned reigon: 27 Coverage over query: 64-90 Coverage over subject: 52-82 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g034037m | 105 | hhsearch probability: 97.28 Identity: 36% subject length: 715 Length of aligned reigon: 45 Coverage over query: 45-99 Coverage over subject: 17-86 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g021509m | 311 | hhsearch probability: 97.34 Identity: 36% subject length: 715 Length of aligned reigon: 45 Coverage over query: 230-292 Coverage over subject: 17-86 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g026961m | 230 | hhsearch probability: 97.69 Identity: 36% subject length: 715 Length of aligned reigon: 44 Coverage over query: 150-211 Coverage over subject: 18-86 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g026955m | 230 | hhsearch probability: 97.69 Identity: 36% subject length: 715 Length of aligned reigon: 44 Coverage over query: 150-211 Coverage over subject: 18-86 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g021514m | 311 | hhsearch probability: 97.44 Identity: 38% subject length: 715 Length of aligned reigon: 45 Coverage over query: 230-292 Coverage over subject: 17-86 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g021554m | 311 | hhsearch probability: 97.34 Identity: 36% subject length: 715 Length of aligned reigon: 45 Coverage over query: 230-292 Coverage over subject: 17-86 |
COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g033690m | 113 | hhsearch probability: 97.38 Identity: 31% subject length: 715 Length of aligned reigon: 65 Coverage over query: 41-110 Coverage over subject: 3-77 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g032514m | 139 | hhsearch probability: 95.11 Identity: 35% subject length: 715 Length of aligned reigon: 46 Coverage over query: 89-137 Coverage over subject: 3-65 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g022323m | 299 | hhsearch probability: 96.00 Identity: 29% subject length: 715 Length of aligned reigon: 59 Coverage over query: 231-289 Coverage over subject: 2-82 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g024592m | 265 | hhsearch probability: 97.67 Identity: 17% subject length: 715 Length of aligned reigon: 77 Coverage over query: 68-146 Coverage over subject: 214-290 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g023576m | 280 | hhsearch probability: 97.73 Identity: 24% subject length: 715 Length of aligned reigon: 78 Coverage over query: 71-150 Coverage over subject: 214-291 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g031186m | 164 | hhsearch probability: 97.98 Identity: 38% subject length: 715 Length of aligned reigon: 65 Coverage over query: 89-163 Coverage over subject: 2-81 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0484, DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] |
| 1g043474m | 160 | hhsearch probability: 98.40 Identity: 19% subject length: 715 Length of aligned reigon: 78 Coverage over query: 37-135 Coverage over subject: 214-291 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] |
| 1g036793m | 338 | hhsearch probability: 98.55 Identity: 22% subject length: 715 Length of aligned reigon: 96 Coverage over query: 10-115 Coverage over subject: 334-457 |
COG0618, Exopolyphosphatase-related proteins [General function prediction only] COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms] COG2404, Predicted phosphohydrolase (DHH superfamily) [General function prediction only] COG0608, RecJ Single-stranded DNA-specific exonuclease [DNA replication, recombination, and repair] COG1227, PPX1 Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |
| 1g033976m | 107 | hhsearch probability: 96.29 Identity: 19% subject length: 715 Length of aligned reigon: 73 Coverage over query: 5-78 Coverage over subject: 198-282 |
COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] |